HHsearch alignment for GI: 254780328 and conserved domain: PRK05717

Probab=99.60  E-value=7.2e-16  Score=117.37  Aligned_cols=225  Identities=15%  Similarity=0.051  Sum_probs=144.1

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH----HHCCCCEEEEECCCHHHHHHHHHHC-----CCCE
Q ss_conf             964479996878827799999999879889999268767521----3023867984268999999998756-----9889
Q gi|254780328|r    1 MENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAE----FVLWGPLEQVDICDYTNLRAVFAKY-----QPAS   71 (333)
Q Consensus         1 m~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~----~~~~~~~~~~Di~d~~~l~~~~~~~-----~~d~   71 (333)
T Consensus         8 l~GKvalITG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~i~~~~~~~G~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGAKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCE
T ss_conf             99988999587888999999999987998999969889999999984897589993079999999999999998299989


Q ss_pred             EEECHHHCCCC------CCCCCCEEEEEECCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99571440112------234310012330123332221122222---222222233332222222222222222222222
Q gi|254780328|r   72 VMHFAGLTNIS------ESVKNPSLFYEINIKGSFNLIATAIES---NVRRFIFSSTCATYGIPHNTIITENDPQESITP  142 (333)
Q Consensus        72 ViHlAa~~~~~------~~~~~p~~~~~~Nv~gt~~ll~~~~~~---~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~  142 (333)
T Consensus        88 lvnNAg~~~~~~~~l~~~~~~~w~~~~~vNl~g~f~~~k~~~~~m~~~~G~IInisS~~~~~~-----------~~~~~~  156 (255)
T PRK05717         88 LVCNAAIANPHNTTLESLSLAQWNRVLAVNLGGPMLLAKHCAPYLRAHNGAIVNLASTRARQS-----------EPDTEA  156 (255)
T ss_pred             EEECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEECCCCCC-----------CCCCHH
T ss_conf             998773057899983559999999999986042657766431988747998699976014547-----------898376


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22222233322222222222222222222222222222222233333222222222222222222222222222223221
Q gi|254780328|r  143 YGYTKYVVERELLQHNKVNGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCL  222 (333)
Q Consensus       143 Yg~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~  222 (333)
T Consensus       157 Y~asKaal~~ltkslA~e~a~~---IRv-N~I~PG~i~t~----~~~~~~-~~~~~~~~~---------------~~~Pl  212 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGPE---IRV-NAVSPGWIDAR----DPSQRR-AEPLSEADH---------------AQHPA  212 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC---CEE-EEEECCCCCCC----CHHHHC-CHHHHHHHH---------------HCCCC
T ss_conf             7999999999999999997799---989-99962718888----745524-646899998---------------47997


Q ss_pred             CCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEE
Q ss_conf             10011111000000011100235873103641799802
Q gi|254780328|r  223 RDYIHVLDLANAHIMALEYLINQGDSIAINLGTGTGIT  260 (333)
Q Consensus       223 Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~Nig~~~~~s  260 (333)
T Consensus       213 ~R~g~~edia~~v~fL~S~~ss~iTGq~i~VDGG~t~~  250 (255)
T PRK05717        213 GRVGTVEDVAAMVAWLLSRNAGFVTGQEFVVDGGMTRK  250 (255)
T ss_pred             CCCCCHHHHHHHHHHHHCCHHCCCCCCEEEECCCHHHC
T ss_conf             89819999999999996772148159838979894000