HHsearch alignment for GI: 254780328 and conserved domain: PRK08644
>PRK08644 thiamine biosynthesis protein ThiF; Provisional.
Probab=96.70 E-value=0.0018 Score=40.66 Aligned_cols=121 Identities=15% Similarity=0.176 Sum_probs=56.8
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC--CCCCCHHHHCCCCEEEEECCC--HHHHHHHHHHCCCCEEEEC
Q ss_conf 9644799968788277999999998798-8999926--876752130238679842689--9999999875698899957
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDN--LSSGHAEFVLWGPLEQVDICD--YTNLRAVFAKYQPASVMHF 75 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~--~~~~~~~~~~~~~~~~~Di~d--~~~l~~~~~~~~~d~ViHl 75 (333)
T Consensus 25 L~~s~VlivG~GG-LG~~~a~~La~aGVG~i~lvD~D~Ve~SN-L~RQ-~-~~~~diG~~Ka~~a~~~l~~iNp~v~I~~ 100 (209)
T PRK08644 25 LKKAKVGIAGAGG-LGSNIAVALARSGVGNLKLVDFDVVEPSN-LNRQ-Q-YFISQIGMFKVEALKENLLRINPFVKIEV 100 (209)
T ss_pred HHCCCEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCEECCCC-CCCC-C-CCHHHCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 9629689988878-89999999999389818998899901541-1037-5-67877597569999999874489828999
Q ss_pred HHHCCCCCCCC----CCEEEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 14401122343----100123--301233322211222222222222333322222
Q gi|254780328|r 76 AGLTNISESVK----NPSLFY--EINIKGSFNLIATAIESNVRRFIFSSTCATYGI 125 (333)
Q Consensus 76 Aa~~~~~~~~~----~p~~~~--~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~ 125 (333)
T Consensus 101 ~~~~l~~~n~~~l~~~~DiViDctDN~~tR~li~~~c~~~~~~plV~as~i~g~g~ 156 (209)
T PRK08644 101 HQVKIDEDNIEELFKDCDIVVEAFDNAETKAMLVETVLEKKGKKVVSASGMAGYGD 156 (209)
T ss_pred EECCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
T ss_conf 72248989999998579999999999999999999999977996899961215757