HHsearch alignment for GI: 254780328 and conserved domain: PRK10084
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional.
Probab=100.00 E-value=0 Score=474.63 Aligned_cols=309 Identities=27% Similarity=0.400 Sum_probs=266.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCC-CHHHH------CCCCEEEEECCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 4799968788277999999998798-89999268767-52130------2386798426899999999875698899957
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSG-HAEFV------LWGPLEQVDICDYTNLRAVFAKYQPASVMHF 75 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~-~~~~~------~~~~~~~~Di~d~~~l~~~~~~~~~d~ViHl 75 (333)
T Consensus 1 MkILVTGg~GFIGs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~~D~ViHl 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 97999751008999999999977998899984798767788888763089717998567899999999997399999997
Q ss_pred HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCC---------CCCC-CCCCCC
Q ss_conf 1440112234310012330123332221122222---------22222223333222222---------2222-222222
Q gi|254780328|r 76 AGLTNISESVKNPSLFYEINIKGSFNLIATAIES---------NVRRFIFSSTCATYGIP---------HNTI-ITENDP 136 (333)
Q Consensus 76 Aa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~---------~~~~~i~~SS~~vYG~~---------~~~~-~~E~~~ 136 (333)
T Consensus 81 AA~~~~~~s~~~p~~~~~~Nv~gt~nllea~~~~~~~l~~~~~~~~rfv~~SS~~vYG~~~~p~~~~~~~~~p~~~e~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSVELPLFTETTA 160 (352)
T ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73466561330967865223786999999999986432001354058887101403468888633356655776557899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222222222233322222222222222222222222222222222233333222222222222222222222222222
Q gi|254780328|r 137 QESITPYGYTKYVVERELLQHNKVNGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYAT 216 (333)
Q Consensus 137 ~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~ 216 (333)
T Consensus 161 ~~p~~~Y~~sK~~~E~l~~~~~~~~gl~~~i~R~~nvyGP~~~~---------~~~i~~~i~~~l~g-~~i~i~G----- 225 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP---------EKLIPLVILNALEG-KPLPIYG----- 225 (352)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCC---------CHHHHHHHHHHHCC-CEEEEEC-----
T ss_conf 99999899999999999998776515876998527530869996---------03699999999809-7368817-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCC--------CCCEEECCCCCCCC
Q ss_conf 2232211001111100000001110023587310364179980299999999998378--------98759857898886
Q gi|254780328|r 217 RDGTCLRDYIHVLDLANAHIMALEYLINQGDSIAINLGTGTGITVKEIISTIQSMYEC--------AFPITYESRRIGDP 288 (333)
Q Consensus 217 ~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~--------~~~i~~~~~~~~~~ 288 (333)
T Consensus 226 -~G~~~Rdf~yV~D~v~a~~~~~~~---~~~g~~yNig~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~i~~~~~rp~~~ 301 (352)
T PRK10084 226 -KGDQIRDWLYVEDHARALYKVVTE---GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHD 301 (352)
T ss_pred -CCCEEEEEEEHHHHHHHHHHHHHC---CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC
T ss_conf -998567129759999999999866---9999959989999763899999999999987412168532322469999997
Q ss_pred CEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 2221270899998188761079999999999999724220013
Q gi|254780328|r 289 PSLVADNKKAKKILGWNPKYKLRDIIESAWNWHLKYPRSLSNE 331 (333)
Q Consensus 289 ~~~~~d~~k~~~~LGw~p~~~leegi~~~i~~~~~~~~~~~~~ 331 (333)
T Consensus 302 ~~~~~d~sk~~~~LGw~P~~sl~eGl~~ti~Wy~~N~~~~~~~ 344 (352)
T PRK10084 302 RRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTEWVQNV 344 (352)
T ss_pred CEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5431389999998499869999999999999999789999745