HHsearch alignment for GI: 254780328 and conserved domain: PRK11150
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional.
Probab=100.00 E-value=0 Score=421.99 Aligned_cols=298 Identities=22% Similarity=0.285 Sum_probs=234.7
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHHCCCCEEEEECCCHHHH-HHHHHHC---CCCEEEECHHHCC
Q ss_conf 99968788277999999998798-89999268767521302386798426899999-9998756---9889995714401
Q gi|254780328|r 6 VLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGHAEFVLWGPLEQVDICDYTNL-RAVFAKY---QPASVMHFAGLTN 80 (333)
Q Consensus 6 IlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~Di~d~~~l-~~~~~~~---~~d~ViHlAa~~~ 80 (333)
T Consensus 2 ILVTGgaGFIGS~l~~~L~~~G~~~V~~~Dnl~~~~~~~-~l~~~~~~d~~~~~~~~~~~~~~~~~~~id~V~Hlaa~~~ 80 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS 80 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC-CCCCCCCCHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf 999405979999999999977998099997899973130-1235631012038999999861134578768999986666
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12234310012330123332221122222222222233332222222222222222222222222222333222222222
Q gi|254780328|r 81 ISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKV 160 (333)
Q Consensus 81 ~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~~~~~~~~ 160 (333)
T Consensus 81 ~~~--~~~~~~~~~n~~~t~nll~~~~~~~~-~~i~aSSs~vYG~~~~~~~~E~~~~~P~s~Yg~sK~~~E~~~~~~~~~ 157 (308)
T PRK11150 81 TTE--WDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE 157 (308)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHCCC-CEEEECCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 645--56511321499999999999997499-889954756408988898656888998687676099999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22222222222222222222222233333222222222222222222222222222223221100111110000000111
Q gi|254780328|r 161 NGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIHVLDLANAHIMALE 240 (333)
Q Consensus 161 ~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~ 240 (333)
T Consensus 158 ~~~~~~~lR~fnvYGP~~~~~-----~~~~~v~~~~~~~~~~g~~~~~~~G------~g~~~RDfiyV~Dv~~a~~~~~~ 226 (308)
T PRK11150 158 ANSQICGFRYFNVYGPREGHK-----GSMASVAFHLNNQLNNGENPKLFEG------SENFKRDFVYVGDVAAVNLWFLE 226 (308)
T ss_pred CCCCCEEEEEEEEECCCCCCC-----CCCCCHHHHHHHHHHCCCCCEEECC------CCCEEEEEEEHHHHHHHHHHHHH
T ss_conf 399828987623789597888-----8732079999999977999747539------99878845778999999999985
Q ss_pred HCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEECCC---CCCC-CCEEEECHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 0023587310364179980299999999998378987598578---9888-62221270899998188761079999999
Q gi|254780328|r 241 YLINQGDSIAINLGTGTGITVKEIISTIQSMYECAFPITYESR---RIGD-PPSLVADNKKAKKILGWNPKYKLRDIIES 316 (333)
Q Consensus 241 ~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i~~~~~---~~~~-~~~~~~d~~k~~~~LGw~p~~~leegi~~ 316 (333)
T Consensus 227 ~~----~~gv~NiGsg~~~si~el~~~i~~~~g~-~~i~~i~~p~~~~~~~~~~~~aDisK~~~lg~~~p~~sleeGl~~ 301 (308)
T PRK11150 227 NG----VSGIFNLGTGRAESFQAVADAVLAYHKK-GEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVTE 301 (308)
T ss_pred CC----CCCEEEECCCCCEEHHHHHHHHHHHHCC-CCCEECCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 69----9874998799969799999999998498-871242685445777751112569999982589998799999999
Q ss_pred HHHHHHH
Q ss_conf 9999997
Q gi|254780328|r 317 AWNWHLK 323 (333)
Q Consensus 317 ~i~~~~~ 323 (333)
T Consensus 302 tv~W~~r 308 (308)
T PRK11150 302 YMAWLNR 308 (308)
T ss_pred HHHHHCC
T ss_conf 9999659