HHsearch alignment for GI: 254780328 and conserved domain: TIGR01777

>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=99.95  E-value=7.5e-29  Score=197.61  Aligned_cols=274  Identities=18%  Similarity=0.236  Sum_probs=190.7

Q ss_pred             EEEECC-CCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH-CCC----CEEEE--ECCCHHHHHHHHHHCCCCEEEECHH
Q ss_conf             999687-882779999999987988999926876752130-238----67984--2689999999987569889995714
Q gi|254780328|r    6 VLVVGG-AGYIGAHTCRVLYERGFLPIVLDNLSSGHAEFV-LWG----PLEQV--DICDYTNLRAVFAKYQPASVMHFAG   77 (333)
Q Consensus         6 IlItG~-tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~~~-~~~----~~~~~--Di~d~~~l~~~~~~~~~d~ViHlAa   77 (333)
T Consensus         1 ~litGgnTGfiG~~L~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-W-~~l~~--~DaviNLAG   76 (307)
T TIGR01777         1 ILITGGNTGFIGRALTQRLTKSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAESG-W-SALEG--ADAVINLAG   76 (307)
T ss_pred             CEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHC-C-CCCCC--CCEEEECCC
T ss_conf             9641533023789999999847998999961686432000255445555221245207220-5-66788--627985568


Q ss_pred             HCCC---CCCCCCCEEEEEECCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             4011---2234310012330123332221122222-----2222222333322222222222222222222222222223
Q gi|254780328|r   78 LTNI---SESVKNPSLFYEINIKGSFNLIATAIES-----NVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYV  149 (333)
Q Consensus        78 ~~~~---~~~~~~p~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~  149 (333)
T Consensus        77 ~~i~~P~RWt~~~K~~i~~SRi~~T~~L~~~i~~~~r~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~~~~ddF-la~lc  155 (307)
T TIGR01777        77 EPIADPKRWTEERKQEIRDSRIDTTRALVEAIAAAPRAEQKPKVFISASAVGYYGHSEDRVFTEEDASGPGDDF-LAELC  155 (307)
T ss_pred             CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCCCCCCCC-HHHHH
T ss_conf             88577888787775756523347899999999846566788716885016663068998215116678887772-18999


Q ss_pred             CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3322222-222222222222222222222222222233333222222222222222222222222222223221100111
Q gi|254780328|r  150 VERELLQ-HNKVNGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIHV  228 (333)
Q Consensus       150 ~E~~~~~-~~~~~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rdfi~v  228 (333)
T Consensus       156 ~~WE~~A~~a~~~g~Rvv~~R~G~VLg~~GG------------aL~~m~~-------pf~~-glGGplG~G~Q~~SWIH~  215 (307)
T TIGR01777       156 RDWEEAAQAAEQLGTRVVLLRTGIVLGPKGG------------ALAKMLP-------PFRL-GLGGPLGSGRQWFSWIHI  215 (307)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEEEECCCCC------------CHHHHHH-------HHHH-HCCCCCCCCCCCCCHHHH
T ss_conf             9999985105336873898764134708987------------0345456-------6765-157423688414505358


Q ss_pred             CCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEECCC-----CCCCCCEEEECH-----HHH
Q ss_conf             1100000001110023587310364179980299999999998378987598578-----988862221270-----899
Q gi|254780328|r  229 LDLANAHIMALEYLINQGDSIAINLGTGTGITVKEIISTIQSMYECAFPITYESR-----RIGDPPSLVADN-----KKA  298 (333)
Q Consensus       229 ~D~~~a~~~~~~~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i~~~~~-----~~~~~~~~~~d~-----~k~  298 (333)
T Consensus       216 ~D~v~~I~~~l~~~~~---~Gp~N~tAP~Pv~n~~F~~~la~~l~RP~~~~-vP~~~~~~~LGe~a~~~L~gQrV~P~kl  291 (307)
T TIGR01777       216 EDLVQLILFALENASV---SGPVNATAPEPVRNKEFAKALARALHRPAFLP-VPAFVLRLLLGEMADLLLKGQRVLPEKL  291 (307)
T ss_pred             HHHHHHHHHHHHCCCC---CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999999999855899---63254107886357899999999818970101-1089999884255888986578999999


Q ss_pred             HHHHCCCCCCC
Q ss_conf             99818876107
Q gi|254780328|r  299 KKILGWNPKYK  309 (333)
Q Consensus       299 ~~~LGw~p~~~  309 (333)
T Consensus       292 ~~-~GF~F~Y~  301 (307)
T TIGR01777       292 LE-AGFQFQYP  301 (307)
T ss_pred             HH-CCCEEECC
T ss_conf             97-49766213