HHsearch alignment for GI: 254780328 and conserved domain: TIGR01830

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=99.41  E-value=9.5e-14  Score=104.25  Aligned_cols=211  Identities=20%  Similarity=0.132  Sum_probs=148.8

Q ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH-----HC---CCCEEEEECCCHHHHHHHHHH-----CCCCEE
Q ss_conf             99968788277999999998798899992687675213-----02---386798426899999999875-----698899
Q gi|254780328|r    6 VLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAEF-----VL---WGPLEQVDICDYTNLRAVFAK-----YQPASV   72 (333)
Q Consensus         6 IlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~~-----~~---~~~~~~~Di~d~~~l~~~~~~-----~~~d~V   72 (333)
T Consensus         1 AlVTGasRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiL   79 (238)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDIL   79 (238)
T ss_pred             CEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEE
T ss_conf             967167861679999999867995999659825788899999985697599996038888999999999999829-9089


Q ss_pred             EECHHHCCCCC----CCCCCEEEEEECCCCCCCCCCCCCCC----CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             95714401122----34310012330123332221122222----22222223333-22222222222222222222222
Q gi|254780328|r   73 MHFAGLTNISE----SVKNPSLFYEINIKGSFNLIATAIES----NVRRFIFSSTC-ATYGIPHNTIITENDPQESITPY  143 (333)
Q Consensus        73 iHlAa~~~~~~----~~~~p~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~-~vYG~~~~~~~~E~~~~~p~~~Y  143 (333)
T Consensus        80 VNNAGITrD~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQa------------NY  147 (238)
T TIGR01830        80 VNNAGITRDNLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQA------------NY  147 (238)
T ss_pred             EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHH------------HH
T ss_conf             978741343010048855689999861266878889988988750674348610020000687426------------78


Q ss_pred             CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2222233322222222222---2222222222222222222222333332222222222222222222222222222232
Q gi|254780328|r  144 GYTKYVVERELLQHNKVNG---LRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGT  220 (333)
Q Consensus       144 g~sK~~~E~~~~~~~~~~~---~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~  220 (333)
T Consensus       148 aASKAG~IGftKSlAkElasRnItVNaVAPGFI~T------------dMT~~L~e~~~~~~l~~IPLgR~G~--------  207 (238)
T TIGR01830       148 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIET------------DMTDKLSEKVKKAMLSQIPLGRFGT--------  207 (238)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC------------CCCHHCCHHHHHHHHHCCCCCCCCC--------
T ss_conf             88875589999999986036870588874899897------------0002169889999985277232677--------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
Q ss_conf             211001111100000001110023587310364179
Q gi|254780328|r  221 CLRDYIHVLDLANAHIMALEYLINQGDSIAINLGTG  256 (333)
Q Consensus       221 ~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~Nig~~  256 (333)
T Consensus       208 -------pEeVA~~v~FLASd~AsYITGqv~~VdGG  236 (238)
T TIGR01830       208 -------PEEVANAVAFLASDEASYITGQVIHVDGG  236 (238)
T ss_pred             -------HHHHHHHHHHHCCCCCCCCCCCEEECCCC
T ss_conf             -------65699999973251247425516630687