HHsearch alignment for GI: 254780328 and conserved domain: TIGR02356
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=96.26 E-value=0.0063 Score=37.33 Aligned_cols=97 Identities=18% Similarity=0.242 Sum_probs=56.7
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC----CCCCCHHHH------------------------CCCCE--
Q ss_conf 964479996878827799999999879-88999926----876752130------------------------23867--
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERG-FLPIVLDN----LSSGHAEFV------------------------LWGPL-- 49 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g-~~v~~~d~----~~~~~~~~~------------------------~~~~~-- 49 (333)
T Consensus 19 L~~s~VLiiGaGg-LGs~~~~~LA~AGVG~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN~~i~v~a 97 (210)
T TIGR02356 19 LLASHVLIIGAGG-LGSPAALYLAAAGVGTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELNSDIRVTA 97 (210)
T ss_pred HHHCCEEEEEECH-HHHHHHHHHHHCCCCEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 8608659997261-456899999828883789985167701012055430324420131589999999985388968998
Q ss_pred EEEECCCHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 984268999999998756988999571440112234310012330123332221-122222222222233
Q gi|254780328|r 50 EQVDICDYTNLRAVFAKYQPASVMHFAGLTNISESVKNPSLFYEINIKGSFNLI-ATAIESNVRRFIFSS 118 (333)
Q Consensus 50 ~~~Di~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll-~~~~~~~~~~~i~~S 118 (333)
T Consensus 98 ~~~~-vt~~~~~~~i~~~DPdlVlDc~-----D-Nf~------------tryliNdaC~~~~~-PlI~aa 147 (210)
T TIGR02356 98 LKER-VTAENLELLIENVDPDLVLDCT-----D-NFA------------TRYLINDACQALGI-PLISAA 147 (210)
T ss_pred EEEC-CCHHHHHHHHHCCCCCEEEECC-----C-CHH------------HHHHHHHHHHHHCC-CEEEEE
T ss_conf 5420-2779999996238996896156-----6-877------------88999999998479-869998