HHsearch alignment for GI: 254780328 and conserved domain: cd00704
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.45 E-value=0.0056 Score=37.66 Aligned_cols=163 Identities=15% Similarity=0.089 Sum_probs=80.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-------EEEEEECCCC-----CCHHHHCCC--CE-EEEECCCHHHHHHHHHHCC
Q ss_conf 4799968788277999999998798-------8999926876-----752130238--67-9842689999999987569
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGF-------LPIVLDNLSS-----GHAEFVLWG--PL-EQVDICDYTNLRAVFAKYQ 68 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~-------~v~~~d~~~~-----~~~~~~~~~--~~-~~~Di~d~~~l~~~~~~~~ 68 (333)
T Consensus 1 ~KV~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~~~~~~v~~~--~~~~~~~~~-- 76 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--TDPEEAFKD-- 76 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEC--CCHHHHHCC--
T ss_conf 9899989997899999999972863699860089997588865553148786653466555874842--885898379--
Q ss_pred CCEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC-CC-CCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 889995714401122343100123301233322211222222-22-222233332---2222222222222222222222
Q gi|254780328|r 69 PASVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESN-VR-RFIFSSTCA---TYGIPHNTIITENDPQESITPY 143 (333)
Q Consensus 69 ~d~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~-~~-~~i~~SS~~---vYG~~~~~~~~E~~~~~p~~~Y 143 (333)
T Consensus 77 aDvViitaG~prkp-G-~tR~DLl~~N~~I~k~~~~~i~~~a~p~~~vivvsNPvD~~~~-----v~~k~sg~~~~~~i~ 149 (323)
T cd00704 77 VDVAILVGAFPRKP-G-MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNAL-----IALKNAPNLPPKNFT 149 (323)
T ss_pred CCEEEECCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH-----HHHHHCCCCCCCEEE
T ss_conf 98899827878899-9-8279999874899999999998517998389995786468999-----999976999824799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2222233322222222222222222222222222
Q gi|254780328|r 144 GYTKYVVERELLQHNKVNGLRSVVLRYFNAAGAT 177 (333)
Q Consensus 144 g~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 177 (333)
T Consensus 150 ~~t~LDsaR~r~~la~~l~v~~~~V~~~iI~GeH 183 (323)
T cd00704 150 ALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNH 183 (323)
T ss_pred EEEEHHHHHHHHHHHHHHCCCHHHCEEEEEEECC
T ss_conf 9652799999999999978397892787999878