HHsearch alignment for GI: 254780328 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.34 E-value=0.0012 Score=41.79 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=50.9
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHH------HHCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf 964479996878827799999999879889999268767521------30238679842689999999987569889995
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAE------FVLWGPLEQVDICDYTNLRAVFAKYQPASVMH 74 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~------~~~~~~~~~~Di~d~~~l~~~~~~~~~d~ViH 74 (333)
T Consensus 26 l~g~~~~V~G~tG~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~~~~~~~~~~~~~~~~~l~~a--diV~~ 103 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGA--DVVFA 103 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC--CEEEE
T ss_conf 6798899985885789999999998399799995878889999999999709873113578877899774669--89996
Q ss_pred CHH
Q ss_conf 714
Q gi|254780328|r 75 FAG 77 (333)
Q Consensus 75 lAa 77 (333)
T Consensus 104 a~a 106 (194)
T cd01078 104 AGA 106 (194)
T ss_pred CCH
T ss_conf 427