HHsearch alignment for GI: 254780328 and conserved domain: cd01487
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.64 E-value=0.016 Score=34.88 Aligned_cols=118 Identities=14% Similarity=0.147 Sum_probs=56.4
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC--CCCCCHHHHCCCCEEEEECCCH--HHHHHHHHHCCCCEEEECHHHC
Q ss_conf 799968788277999999998798-8999926--8767521302386798426899--9999998756988999571440
Q gi|254780328|r 5 NVLVVGGAGYIGAHTCRVLYERGF-LPIVLDN--LSSGHAEFVLWGPLEQVDICDY--TNLRAVFAKYQPASVMHFAGLT 79 (333)
Q Consensus 5 kIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~--~~~~~~~~~~~~~~~~~Di~d~--~~l~~~~~~~~~d~ViHlAa~~ 79 (333)
T Consensus 1 kV~IvG~GG-LG~~~a~~La~aGvg~i~lvD~D~Ve~SN-L~RQ-~-~~~~diG~~Ka~~a~~~l~~iNp~i~i~~~~~~ 76 (174)
T cd01487 1 KVGIAGAGG-LGSNIAVLLARSGVGNLKLVDFDVVEPSN-LNRQ-Q-YFLSQIGEPKVEALKENLREINPFVKIEAINIK 76 (174)
T ss_pred CEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCCCCCCC-HHCC-H-HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 989987678-89999999998189739999899466644-3013-2-477747974999999999987979889999144
Q ss_pred CCCCC----CCCCEEEEE--ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11223----431001233--012333222112222222222223333222222
Q gi|254780328|r 80 NISES----VKNPSLFYE--INIKGSFNLIATAIESNVRRFIFSSTCATYGIP 126 (333)
Q Consensus 80 ~~~~~----~~~p~~~~~--~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~ 126 (333)
T Consensus 77 l~~~n~~~l~~~~D~ViD~~Dn~~tr~~l~~~~~~~~~~plv~as~~~~~g~~ 129 (174)
T cd01487 77 IDENNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCASGMAGFGDS 129 (174)
T ss_pred CCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 49999999983799999999998999999999999879959999745108660