HHsearch alignment for GI: 254780328 and conserved domain: cd05211
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=90.92 E-value=0.58 Score=25.20 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=29.3
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 96447999687882779999999987988999926
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDN 35 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~ 35 (333)
T Consensus 21 l~g~~vaVqG-fGnVG~~~a~~l~~~GakvvavsD 54 (217)
T cd05211 21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSD 54 (217)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 5799999989-889999999999985998999985