HHsearch alignment for GI: 254780328 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=99.92 E-value=6.9e-25 Score=173.12 Aligned_cols=226 Identities=19% Similarity=0.141 Sum_probs=156.4
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC-HH--HHCCCCEEEEECCCHHHHHHHHHHCCCCEEEECHHHCCCC
Q ss_conf 99968788277999999998798899992687675-21--3023867984268999999998756988999571440112
Q gi|254780328|r 6 VLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGH-AE--FVLWGPLEQVDICDYTNLRAVFAKYQPASVMHFAGLTNIS 82 (333)
Q Consensus 6 IlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~-~~--~~~~~~~~~~Di~d~~~l~~~~~~~~~d~ViHlAa~~~~~ 82 (333)
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~al~gv--d~v~~~~~~~~-- 76 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEALKGV--DVVFSVTGFWL-- 76 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCC--CEEEEECCCCC--
T ss_conf 09989682899999999985899389997187366566664179889990688878999996799--88999158874--
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23431001233012333222112222222222223333222222222222222222222222222233322222222222
Q gi|254780328|r 83 ESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNG 162 (333)
Q Consensus 83 ~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~ 162 (333)
T Consensus 77 ----------~~~~~~~~~~~~AA~~aGVk~~V~ss-~~~~-------~~~~~~~~~~~~~~~~K~~~e~~l~----~~g 134 (232)
T pfam05368 77 ----------SKEIEDGKKLADAAKEAGVKHFIPSE-FGND-------VDRSNGVEPAVPHFDSKAEVERYIR----ALG 134 (232)
T ss_pred ----------CHHHHHHHHHHHHHHHCCCCCEEEEE-ECCC-------CCCCCCCCCCCHHHHHHHHHHHHHH----HHC
T ss_conf ----------17799999999999973998345555-0125-------5456766655278898999999999----819
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHH
Q ss_conf 2222222222222222222222333332222222222222222222222222222232-211001111100000001110
Q gi|254780328|r 163 LRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGT-CLRDYIHVLDLANAHIMALEY 241 (333)
Q Consensus 163 ~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~-~~Rdfi~v~D~~~a~~~~~~~ 241 (333)
T Consensus 135 ~~~tilrp~~f~~~~~~~-----------~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~Dva~~~~~~l~~ 195 (232)
T pfam05368 135 IPYTFVYAGFFMGNFLSN-----------LAPPGD--LAPPRDKVTLLG------PGNPKAVPLDDEEDIGTYVIKILDD 195 (232)
T ss_pred CCEEEEECCCHHHHHHHH-----------HHHHHH--CCCCCCEEEEEC------CCCCCEEEEEEHHHHHHHHHHHHCC
T ss_conf 985999684254301656-----------544320--257653699944------8987611265288999999999649
Q ss_pred CCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCE
Q ss_conf 0235873103641799802999999999983789875
Q gi|254780328|r 242 LINQGDSIAINLGTGTGITVKEIISTIQSMYECAFPI 278 (333)
Q Consensus 242 ~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i 278 (333)
T Consensus 196 p~~~-~~~~~~~-~~~~lT~~Eia~~~~~~~Gr~v~y 230 (232)
T pfam05368 196 PRKL-KGKYIRP-PGNILSGNEIAELWSKKIGKTVKY 230 (232)
T ss_pred HHHC-CCEEEEE-CCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf 1211-9999982-898679999999999988998377