HHsearch alignment for GI: 254780328 and conserved domain: pfam05368

>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=99.92  E-value=6.9e-25  Score=173.12  Aligned_cols=226  Identities=19%  Similarity=0.141  Sum_probs=156.4

Q ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC-HH--HHCCCCEEEEECCCHHHHHHHHHHCCCCEEEECHHHCCCC
Q ss_conf             99968788277999999998798899992687675-21--3023867984268999999998756988999571440112
Q gi|254780328|r    6 VLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGH-AE--FVLWGPLEQVDICDYTNLRAVFAKYQPASVMHFAGLTNIS   82 (333)
Q Consensus         6 IlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~-~~--~~~~~~~~~~Di~d~~~l~~~~~~~~~d~ViHlAa~~~~~   82 (333)
T Consensus         1 IlV~GatG~iG~~vv~~L~~~g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~al~gv--d~v~~~~~~~~--   76 (232)
T pfam05368         1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEALKGV--DVVFSVTGFWL--   76 (232)
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCC--CEEEEECCCCC--
T ss_conf             09989682899999999985899389997187366566664179889990688878999996799--88999158874--


Q ss_pred             CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23431001233012333222112222222222223333222222222222222222222222222233322222222222
Q gi|254780328|r   83 ESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNG  162 (333)
Q Consensus        83 ~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~  162 (333)
T Consensus        77 ----------~~~~~~~~~~~~AA~~aGVk~~V~ss-~~~~-------~~~~~~~~~~~~~~~~K~~~e~~l~----~~g  134 (232)
T pfam05368        77 ----------SKEIEDGKKLADAAKEAGVKHFIPSE-FGND-------VDRSNGVEPAVPHFDSKAEVERYIR----ALG  134 (232)
T ss_pred             ----------CHHHHHHHHHHHHHHHCCCCCEEEEE-ECCC-------CCCCCCCCCCCHHHHHHHHHHHHHH----HHC
T ss_conf             ----------17799999999999973998345555-0125-------5456766655278898999999999----819


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHH
Q ss_conf             2222222222222222222222333332222222222222222222222222222232-211001111100000001110
Q gi|254780328|r  163 LRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGT-CLRDYIHVLDLANAHIMALEY  241 (333)
Q Consensus       163 ~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~-~~Rdfi~v~D~~~a~~~~~~~  241 (333)
T Consensus       135 ~~~tilrp~~f~~~~~~~-----------~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~Dva~~~~~~l~~  195 (232)
T pfam05368       135 IPYTFVYAGFFMGNFLSN-----------LAPPGD--LAPPRDKVTLLG------PGNPKAVPLDDEEDIGTYVIKILDD  195 (232)
T ss_pred             CCEEEEECCCHHHHHHHH-----------HHHHHH--CCCCCCEEEEEC------CCCCCEEEEEEHHHHHHHHHHHHCC
T ss_conf             985999684254301656-----------544320--257653699944------8987611265288999999999649


Q ss_pred             CCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCE
Q ss_conf             0235873103641799802999999999983789875
Q gi|254780328|r  242 LINQGDSIAINLGTGTGITVKEIISTIQSMYECAFPI  278 (333)
Q Consensus       242 ~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i  278 (333)
T Consensus       196 p~~~-~~~~~~~-~~~~lT~~Eia~~~~~~~Gr~v~y  230 (232)
T pfam05368       196 PRKL-KGKYIRP-PGNILSGNEIAELWSKKIGKTVKY  230 (232)
T ss_pred             HHHC-CCEEEEE-CCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf             1211-9999982-898679999999999988998377