RPSBLAST alignment for GI: 254780328 and conserved domain: COG1088
>gnl|CDD|31285 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]. Length = 340
Score = 124 bits (312), Expect = 4e-29
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 38/337 (11%)
Query: 4 KNVLVVGGAGYIGAHTCRVLYERG--FLPIVLDNLS-SGHAEFV--LWGP----LEQVDI 54
+LV GGAG+IG++ R + + + LD L+ +G+ E + + Q DI
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI 60
Query: 55 CDYTNLRAVFAKYQPASVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVR-R 113
CD + +F +YQP +V+HFA +++ S+ P+ F + N+ G++ L+ A + + R
Sbjct: 61 CDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120
Query: 114 FIFSSTCATYG-IPHN-TIITENDPQESITPYGYTKYVVERELLQHNKVNGLRSVVLRYF 171
F ST YG + + TE P +PY +K + + + + GL + + R
Sbjct: 121 FHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCS 180
Query: 172 NAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIHVLDL 231
N G + PE +IPL I A+ V+G DG +RD+++V D
Sbjct: 181 NNYGP--------YQFPEK-LIPLMIINAL-LGKPLPVYG------DGLQIRDWLYVED- 223
Query: 232 ANAHIMALEYLINQGDSIAI-NLGTGTGITVKEIISTIQSMYE-----CAFPITYESRRI 285
H A++ ++ +G N+G G T E++ TI + IT+ R
Sbjct: 224 ---HCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRP 280
Query: 286 GDPPSLVADNKKAKKILGWNPKYKLRDIIESAWNWHL 322
G D K K+ LGW P+ + +W+L
Sbjct: 281 GHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYL 317