HHsearch alignment of GI: 254780329 and MMDB domain: 1cqm_A_
>1cqm_A (A:) Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus}
Probab=99.96 E-value=1e-29 Score=194.39 Aligned_cols=101 Identities=24% Similarity=0.451 Sum_probs=97.7
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCEEEEEEEEEECCHHHHHHHHHHHC
Q ss_conf 98705999987899999999999999999985697899970368653530322241899999998089779999999808
Q gi|254780329|r 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMR 80 (135)
Q Consensus 1 M~~YE~~~i~~p~~~~~~~~~~~~~~~~~i~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~i~el~~~lk 80 (135)
||+||++||++|++++++++++++++.+.|.++||.|.++++||+|+|||||+|+++|+|++++|+++|+.+++|++.|+
T Consensus 1 M~~YE~~~i~~~~~~~~~~~~~~~~~~~~i~~~gg~i~~~e~~G~r~LaY~Ikk~~~G~Y~~~~f~~~~~~i~el~~~lr 80 (101)
T 1cqm_A 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELR 80 (101)
T ss_dssp CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEECCCCCEEEEEEEEEEECHHHHHHHHHHHC
T ss_conf 98614999988999999999999999999987898999998761510660747876899999999959999999999867
Q ss_pred CCCHHEEEEEEEECCCCCCCC
Q ss_conf 980210011244113455643
Q gi|254780329|r 81 IDENVLRSLTLLVDSHEQSPT 101 (135)
Q Consensus 81 ~~~~VLR~l~vk~~~~~~~~~ 101 (135)
+|++|||||++|+++....++
T Consensus 81 ~~~~VlR~l~vk~~~~~~~~s 101 (101)
T 1cqm_A 81 IRDNVRRVMVVKSQEPFLANA 101 (101)
T ss_dssp TSTTEEEEEEEECSSCCC---
T ss_pred CCCCEEEEEEEECCCCCCCCC
T ss_conf 898848999997277668999