HHSEARCH alignment of GI: 254780329 and SCOP domain: d1vmba_

Alignment
>d1vmba_ d.58.14.1 (A:) Ribosomal protein S6 {Thermotoga maritima [TaxId: 2336]}
Probab=99.96  E-value=3.6e-30  Score=194.75  Aligned_cols=96  Identities=20%  Similarity=0.436  Sum_probs=93.1

Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCEECCCCCEEEEEEEEEECCHHHHHHHHHHH
Q ss_conf             987059999878999999999999999999856-9789997036865353032224189999999808977999999980
Q gi|254780329|r    1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKM   79 (135)
Q Consensus         1 M~~YE~~~i~~p~~~~~~~~~~~~~~~~~i~~~-gg~i~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~i~el~~~l   79 (135)
                      ||+||++||++|+++++++..+++++.++|+++ ||+|.++++||+|+|||||+|+++|+|++|+|+++|+.+++|++.|
T Consensus         2 ~R~YE~~~Il~p~l~~~~~~~~~~~~~~~i~~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~i~el~~~l   81 (107)
T d1vmba_           2 ERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDYTVIYFRCDGQNLQELENFY   81 (107)
T ss_dssp             CEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECSSSTHHHHHHH
T ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEECCCCCEEEEEEEEEEECHHHHHHHHHHH
T ss_conf             73657999988999989999999999999985699889998720223050475888379999999998988899999986


Q ss_pred             CCCCHHEEEEEEEECCC
Q ss_conf             89802100112441134
Q gi|254780329|r   80 RIDENVLRSLTLLVDSH   96 (135)
Q Consensus        80 k~~~~VLR~l~vk~~~~   96 (135)
                      ++|++|||||+||+++.
T Consensus        82 ~l~~~VlR~livk~~~~   98 (107)
T d1vmba_          82 RVTPEIIRWQTFRRFDL   98 (107)
T ss_dssp             HTCTTEEEEEEEECHHH
T ss_pred             CCCCCEEEEEEEECCCC
T ss_conf             57768378999972100


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Ribosomal protein S6
family: Ribosomal protein S6
domain: Ribosomal protein S6
species: Thermotoga maritima [TaxId: 2336]