BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780329|ref|YP_003064742.1| 30S ribosomal protein S6
[Candidatus Liberibacter asiaticus str. psy62]
(135 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780329|ref|YP_003064742.1| 30S ribosomal protein S6 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040006|gb|ACT56802.1| 30S ribosomal protein S6 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 135
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY
Sbjct: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR
Sbjct: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
Query: 121 NVDRKQHVSEEKPLS 135
NVDRKQHVSEEKPLS
Sbjct: 121 NVDRKQHVSEEKPLS 135
>gi|315122246|ref|YP_004062735.1| 30S ribosomal protein S6 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495648|gb|ADR52247.1| 30S ribosomal protein S6 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 135
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/135 (80%), Positives = 122/135 (90%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFLLRQDI SQ+IKDTI QYQSLI+ENGGEVRLVNE GMRTIAYRI K+RKAYY
Sbjct: 1 MNLYEHVFLLRQDIPSQKIKDTIEQYQSLIKENGGEVRLVNEWGMRTIAYRINKHRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNIASPPA+IHE++R+MRIDENVLR LT+ VDSHE SP+LT+QR+DRDD+NDRFP+DR
Sbjct: 61 VLMNIASPPASIHELERRMRIDENVLRYLTISVDSHEDSPSLTMQRYDRDDKNDRFPKDR 120
Query: 121 NVDRKQHVSEEKPLS 135
N DRK HV EEK LS
Sbjct: 121 NADRKSHVDEEKVLS 135
>gi|86357078|ref|YP_468970.1| 30S ribosomal protein S6 [Rhizobium etli CFN 42]
gi|123512430|sp|Q2KA93|RS6_RHIEC RecName: Full=30S ribosomal protein S6
gi|86281180|gb|ABC90243.1| 30S ribosomal protein S6 [Rhizobium etli CFN 42]
Length = 152
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 91/125 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
M+I +PPAAI EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDDR R DR
Sbjct: 61 ALMDIDAPPAAIQEMERQMRISEDVLRYMTIAVEKHEEGPSAMLQKRDRDDRGPREGGDR 120
Query: 121 NVDRK 125
R+
Sbjct: 121 GPRRE 125
>gi|190891122|ref|YP_001977664.1| 30S ribosomal protein S6 [Rhizobium etli CIAT 652]
gi|218514152|ref|ZP_03510992.1| 30S ribosomal protein S6 [Rhizobium etli 8C-3]
gi|226695119|sp|B3PUT7|RS6_RHIE6 RecName: Full=30S ribosomal protein S6
gi|190696401|gb|ACE90486.1| 30S ribosomal protein S6 [Rhizobium etli CIAT 652]
gi|327188001|gb|EGE55231.1| 30S ribosomal protein S6 [Rhizobium etli CNPAF512]
Length = 152
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 90/125 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
M+I +P AAI EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDDR R DR
Sbjct: 61 ALMDIDAPAAAIQEMERQMRISEDVLRYMTIAVEKHEEGPSAMLQKRDRDDRGPREGGDR 120
Query: 121 NVDRK 125
R+
Sbjct: 121 GPRRE 125
>gi|150395965|ref|YP_001326432.1| 30S ribosomal protein S6 [Sinorhizobium medicae WSM419]
gi|166227387|sp|A6U7G7|RS6_SINMW RecName: Full=30S ribosomal protein S6
gi|150027480|gb|ABR59597.1| ribosomal protein S6 [Sinorhizobium medicae WSM419]
Length = 145
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 86/112 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +I+ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDGLVEQYKGVIEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
V M+I +P A+HE++R+MRI+E++LR +T+ VD HE+ P+ +Q+ DRDDR
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDILRYMTIAVDKHEEGPSAMMQKRDRDDR 112
>gi|209548657|ref|YP_002280574.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226695120|sp|B5ZWC9|RS6_RHILW RecName: Full=30S ribosomal protein S6
gi|209534413|gb|ACI54348.1| ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 155
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 84/111 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
M+I +P AA+ EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDD
Sbjct: 61 ALMDIDAPAAAVQEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQKRDRDD 111
>gi|116251321|ref|YP_767159.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. viciae 3841]
gi|241203935|ref|YP_002975031.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|166227372|sp|Q1MJ10|RS6_RHIL3 RecName: Full=30S ribosomal protein S6
gi|115255969|emb|CAK07050.1| putative 30S ribosomal protein S6 [Rhizobium leguminosarum bv.
viciae 3841]
gi|240857825|gb|ACS55492.1| ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 155
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 84/111 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
M+I +P AA+ EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDD
Sbjct: 61 ALMDIDAPAAAVQEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQKRDRDD 111
>gi|170740808|ref|YP_001769463.1| 30S ribosomal protein S6 [Methylobacterium sp. 4-46]
gi|226703488|sp|B0UL29|RS6_METS4 RecName: Full=30S ribosomal protein S6
gi|168195082|gb|ACA17029.1| ribosomal protein S6 [Methylobacterium sp. 4-46]
Length = 134
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 83/110 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++SQQ++ I Y+ +I+ NGG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVFLARQDVTSQQVESMIEAYKGVIESNGGKVEKTEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+NI +PPAA+ EM+R+MRI E++LR LT+ VD+ E P+ +Q+ DRD
Sbjct: 61 TLLNIDAPPAALAEMERQMRISEDILRFLTIRVDALEGEPSAMMQKRDRD 110
>gi|222085436|ref|YP_002543966.1| ribosomal protein S6 [Agrobacterium radiobacter K84]
gi|254765215|sp|B9JCB9|RS6_AGRRK RecName: Full=30S ribosomal protein S6
gi|221722884|gb|ACM26040.1| ribosomal protein S6 [Agrobacterium radiobacter K84]
Length = 150
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 81/106 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AA+HEM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQK 106
>gi|158425932|ref|YP_001527224.1| 30S ribosomal protein S6 [Azorhizobium caulinodans ORS 571]
gi|189045453|sp|A8HVF1|RS6_AZOC5 RecName: Full=30S ribosomal protein S6
gi|158332821|dbj|BAF90306.1| ribosomal protein S6 [Azorhizobium caulinodans ORS 571]
Length = 150
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL+RQD+++QQ+++ +++ +I+ NGG V V G++++ YRI+KNRKA++
Sbjct: 1 MSLYEHVFLVRQDVTAQQVEELAARFKGVIEANGGTVSKVEAWGVKSLTYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
NI +P AA+ EM+R+M IDE+VLR LT+ VD E+ P+ +Q+ DRDD
Sbjct: 61 TLFNIDAPAAAVQEMERQMGIDEDVLRFLTIRVDELEEGPSAMLQKRDRDD 111
>gi|260466963|ref|ZP_05813145.1| ribosomal protein S6 [Mesorhizobium opportunistum WSM2075]
gi|259029260|gb|EEW30554.1| ribosomal protein S6 [Mesorhizobium opportunistum WSM2075]
Length = 163
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVIAANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
M++ PPAA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q R +R +R RD
Sbjct: 61 TLMDLTCPPAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGGFGDRD 120
Query: 120 RN 121
R
Sbjct: 121 RG 122
>gi|13476510|ref|NP_108080.1| 30S ribosomal protein S6 [Mesorhizobium loti MAFF303099]
gi|24212327|sp|Q984T8|RS6_RHILO RecName: Full=30S ribosomal protein S6
gi|14027271|dbj|BAB54225.1| 30S ribosomal protein S6 [Mesorhizobium loti MAFF303099]
Length = 166
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVISANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
M++ PPAA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q R +R +R RD
Sbjct: 61 TLMDLNCPPAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGSFGDRD 120
Query: 120 RN 121
R
Sbjct: 121 RG 122
>gi|319898718|ref|YP_004158811.1| 30S ribosomal protein S6 [Bartonella clarridgeiae 73]
gi|319402682|emb|CBI76228.1| 30S ribosomal protein S6 [Bartonella clarridgeiae 73]
Length = 135
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 94/128 (73%), Gaps = 5/128 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ Q+I + + Y+ +I+ +GG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHVFLARQDIAPQRIDELLETYKGVIEAHGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI +P AAI E++R+MRI+E++LR +T+ V+ HE+ + T+ R +RDD FP +
Sbjct: 61 VLMNIDAPAAAIVELERQMRINEDILRYMTIRVEKHEKEQSTTLSRLNRDD----FP-SK 115
Query: 121 NVDRKQHV 128
N ++ Q++
Sbjct: 116 NEEKGQNL 123
>gi|220924505|ref|YP_002499807.1| 30S ribosomal protein S6 [Methylobacterium nodulans ORS 2060]
gi|254765444|sp|B8IED2|RS6_METNO RecName: Full=30S ribosomal protein S6
gi|219949112|gb|ACL59504.1| ribosomal protein S6 [Methylobacterium nodulans ORS 2060]
Length = 134
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 83/110 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++SQQ++ I Y+ +I+ NGG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVFLARQDVTSQQVESMIDTYKGVIEANGGKVEKTEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+NI +PPAA+ EM+R+MRI E++LR LT+ V++ E P+ +Q+ DRD
Sbjct: 61 TLLNIDAPPAALAEMERQMRISEDILRFLTIRVEALETEPSAMMQKRDRD 110
>gi|121601858|ref|YP_988809.1| 30S ribosomal protein S6 [Bartonella bacilliformis KC583]
gi|166226802|sp|A1US56|RS6_BARBK RecName: Full=30S ribosomal protein S6
gi|120614035|gb|ABM44636.1| ribosomal protein S6 [Bartonella bacilliformis KC583]
Length = 136
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + + Y+++I+ +GG+V G+R++AYRIRKNRKA+Y
Sbjct: 1 MALYEHVFLARQDIAPQQVDELLKTYKNVIESHGGKVERTENWGLRSLAYRIRKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
V +NI +P AAI EM+R+MRI+E++LR +T+ V+ HE+ + + R DRDD FP
Sbjct: 61 VLINIDAPAAAIAEMERQMRINEDILRYITIRVEKHEKEQSAMLSRPDRDD----FP 113
>gi|222148136|ref|YP_002549093.1| 30S ribosomal protein S6 [Agrobacterium vitis S4]
gi|254765216|sp|B9JUU2|RS6_AGRVS RecName: Full=30S ribosomal protein S6
gi|221735124|gb|ACM36087.1| 30S ribosomal protein S6 [Agrobacterium vitis S4]
Length = 153
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 82/106 (77%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ+ + QY+ +I+ NGG+V V G++++ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDMSAQQVDALVEQYKGVIEANGGKVGRVENWGLKSLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AA+HE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEVERQMRINEDVLRYMTIAVEAHEEGPSAMMQK 106
>gi|319784438|ref|YP_004143914.1| ribosomal protein S6 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170326|gb|ADV13864.1| ribosomal protein S6 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 166
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVISANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
M++ P AA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q R +R +R RD
Sbjct: 61 TLMDLNCPAAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGGFGDRD 120
Query: 120 RN 121
R
Sbjct: 121 RG 122
>gi|298291083|ref|YP_003693022.1| ribosomal protein S6 [Starkeya novella DSM 506]
gi|296927594|gb|ADH88403.1| ribosomal protein S6 [Starkeya novella DSM 506]
Length = 164
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 84/114 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ+++ +++ +I+ NGG V G++T+ YRIRKNRKA++
Sbjct: 1 MALYEHVFLARQDVTAQQVEELTARFKGIIEANGGSVTKAEYWGVKTLTYRIRKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+N+ +P AAI E++R+ RIDE+VLR LT+ V+ E+ ++ +Q+ DRDDR +
Sbjct: 61 SLLNVDAPAAAIAELERQQRIDEDVLRFLTIRVEELEEGQSVMLQKRDRDDRGE 114
>gi|159184610|ref|NP_529003.1| 30S ribosomal protein S6 [Agrobacterium tumefaciens str. C58]
gi|24212301|sp|Q8UGE7|RS6_AGRT5 RecName: Full=30S ribosomal protein S6
gi|17739486|gb|AAL42104.1| 30S ribosomal protein S6 [Agrobacterium tumefaciens str. C58]
Length = 153
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 82/106 (77%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDIS+QQ+ + QY+ +I+ GG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHIFLARQDISAQQVDALVEQYKGVIESFGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AA+HE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEVERQMRINEDVLRYMTIAVEAHEEGPSAMMQK 106
>gi|15964891|ref|NP_385244.1| 30S ribosomal protein S6 [Sinorhizobium meliloti 1021]
gi|307300962|ref|ZP_07580731.1| ribosomal protein S6 [Sinorhizobium meliloti BL225C]
gi|307322232|ref|ZP_07601600.1| ribosomal protein S6 [Sinorhizobium meliloti AK83]
gi|24212320|sp|Q92QZ7|RS6_RHIME RecName: Full=30S ribosomal protein S6
gi|15074070|emb|CAC45717.1| Putative 30S ribosomal protein S6 [Sinorhizobium meliloti 1021]
gi|306892119|gb|EFN22937.1| ribosomal protein S6 [Sinorhizobium meliloti AK83]
gi|306903917|gb|EFN34503.1| ribosomal protein S6 [Sinorhizobium meliloti BL225C]
Length = 149
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 80/106 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +I+ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDALVEQYKGVIEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V M+I +P A+HE++R+MRI+E+VLR +T+ V HE+ P+ +Q+
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDVLRYMTIAVGKHEEGPSAMMQK 106
>gi|319405480|emb|CBI79099.1| 30S ribosomal protein S6 [Bartonella sp. AR 15-3]
Length = 135
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 83/110 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL+RQDI+ QQI + + Y+ +I+ +GG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLVRQDIAPQQIDELLETYKGVIEAHGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI +P AI E++R+MRI+E++LR +T+ V HE+ + T+ R +RD
Sbjct: 61 VLINIDAPAQAIAELERQMRINEDILRYMTIHVKKHEKEQSTTLSRFNRD 110
>gi|325292470|ref|YP_004278334.1| 30S ribosomal protein S6 [Agrobacterium sp. H13-3]
gi|325060323|gb|ADY64014.1| 30S ribosomal protein S6 [Agrobacterium sp. H13-3]
Length = 153
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 81/106 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDIS+QQ+ + QY+ +I+ GG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHIFLARQDISAQQVDALVEQYKGVIESFGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AIHE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAPAIHEIERQMRINEDVLRYMTIAVEAHEEGPSAMMQK 106
>gi|227821460|ref|YP_002825430.1| 30S ribosomal protein S6 [Sinorhizobium fredii NGR234]
gi|254765448|sp|C3M9B1|RS6_RHISN RecName: Full=30S ribosomal protein S6
gi|227340459|gb|ACP24677.1| 30S ribosomal protein S6 [Sinorhizobium fredii NGR234]
Length = 149
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 81/106 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +++ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDALVEQYKGVLEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V M+I +P A+HE++R+MRI+E++LR +T+ V+ HE+ P+ +Q+
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDILRYMTIAVEKHEEGPSAMMQK 106
>gi|163868015|ref|YP_001609219.1| 30S ribosomal protein S6 [Bartonella tribocorum CIP 105476]
gi|189045455|sp|A9IRU5|RS6_BART1 RecName: Full=30S ribosomal protein S6
gi|161017666|emb|CAK01224.1| 30S ribosomal protein S6 [Bartonella tribocorum CIP 105476]
Length = 135
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 85/124 (68%), Gaps = 6/124 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD++ QQ+ + + Y+ +I+ +GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDVAPQQVDELLSLYKGVIETHGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
V +NI +P AAI EM+R+MRI+E++LR +T+ V+ HE+ + + DR D+
Sbjct: 61 VLVNIDAPAAAIAEMERQMRINEDILRYMTIRVEKHEKEKSAMLSHLDRNAHAGQDEERS 120
Query: 115 RFPR 118
R PR
Sbjct: 121 RSPR 124
>gi|307946730|ref|ZP_07662065.1| 30S ribosomal protein S6 [Roseibium sp. TrichSKD4]
gi|307770394|gb|EFO29620.1| 30S ribosomal protein S6 [Roseibium sp. TrichSKD4]
Length = 136
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + QY+ +++ GG V + G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSAQQVEQLVEQYKGVLEAGGGSVGKIENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E++LR +T V+ HE+ P+ +Q+
Sbjct: 61 TLMNITAPHAAVAEMERQMGLSEDILRFMTFKVEEHEEEPSAMMQK 106
>gi|239831325|ref|ZP_04679654.1| ribosomal protein S6 [Ochrobactrum intermedium LMG 3301]
gi|239823592|gb|EEQ95160.1| ribosomal protein S6 [Ochrobactrum intermedium LMG 3301]
Length = 160
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + QY+ +++ NGG+V V G+R + YRI+KNRKAYY
Sbjct: 13 MALYEHVLLARQDISQQQVDALVEQYKGVLEANGGKVGKVESWGLRPLTYRIKKNRKAYY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ VD HE QS LT
Sbjct: 73 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVDEHEEGQSAMLT 117
>gi|328544025|ref|YP_004304134.1| 30S ribosomal protein S6 [polymorphum gilvum SL003B-26A1]
gi|326413769|gb|ADZ70832.1| 30S ribosomal protein S6 [Polymorphum gilvum SL003B-26A1]
Length = 153
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 80/106 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + Q++ LI+ GG V + G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSTQQVEQLVDQFKGLIESGGGTVGKIENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AAI EM+R+M ++E++LR +T+ V++H+ P+ +Q+
Sbjct: 61 TLMNIDAPHAAIAEMERQMGLNEDILRFMTIKVEAHDDEPSAMMQK 106
>gi|319407055|emb|CBI80692.1| 30S ribosomal protein S6 [Bartonella sp. 1-1C]
Length = 135
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 81/110 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQI + + Y+ +I+ NGG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI +P + I E++R+MRI+E++LR +T+ V+ HE+ + + +RD
Sbjct: 61 VLVNIDAPASTIAELERQMRINEDILRYMTVRVEKHEKEQSTALSSLNRD 110
>gi|163842735|ref|YP_001627139.1| 30S ribosomal protein S6 [Brucella suis ATCC 23445]
gi|189045457|sp|B0CKD9|RS6_BRUSI RecName: Full=30S ribosomal protein S6
gi|163673458|gb|ABY37569.1| ribosomal protein S6 [Brucella suis ATCC 23445]
Length = 148
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 85/141 (60%), Gaps = 22/141 (15%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT--------------- 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLTRRDDRRERDGDDRPR 120
Query: 104 -----IQRHDRDDRNDRFPRD 119
R DR DR+ R PRD
Sbjct: 121 RREGGFDRGDRGDRSPRRPRD 141
>gi|114704792|ref|ZP_01437700.1| 30S ribosomal protein S6 [Fulvimarina pelagi HTCC2506]
gi|114539577|gb|EAU42697.1| 30S ribosomal protein S6 [Fulvimarina pelagi HTCC2506]
Length = 155
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+ Q++ + + +++ GG+V V G++T+AYR+ KNRKA+Y
Sbjct: 7 MALYEHVFLARQDVSNNQVEQLVENLRGILESGGGKVGKVENWGLKTLAYRMDKNRKAHY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+HEM+R+MR +E++LR +T+ VD HE P+ +Q+
Sbjct: 67 TLMNIDAPSAAVHEMERQMRFNEDILRFMTIRVDEHEDGPSAMMQK 112
>gi|90419489|ref|ZP_01227399.1| ribosomal protein S6 [Aurantimonas manganoxydans SI85-9A1]
gi|90336426|gb|EAS50167.1| ribosomal protein S6 [Aurantimonas manganoxydans SI85-9A1]
Length = 146
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ++ + Q + +++ NGG++ V G++T+ +RI+KNRKAYY
Sbjct: 1 MALYEHVFLARQDISNQQVEQLVEQLRGILETNGGKIGKVENWGLKTLTFRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+MR +E++LR +T+ V+ HE+ + +Q+
Sbjct: 61 TLMNIDAPSAAVQEMERQMRFNEDILRYMTIRVEEHEEGQSAMMQK 106
>gi|254500250|ref|ZP_05112401.1| ribosomal protein S6, putative [Labrenzia alexandrii DFL-11]
gi|222436321|gb|EEE43000.1| ribosomal protein S6, putative [Labrenzia alexandrii DFL-11]
Length = 154
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S+QQ++ + QY+ LI+ GG + V G+RT+AYRI+KNRKA+Y
Sbjct: 1 MPLYEHIFLARQDVSAQQVETLVEQYKGLIEGAGGTIGKVENWGLRTLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E+VLR +T VD ++ P+ +Q+
Sbjct: 61 TLMNITAPHAAVAEMERQMGLSEDVLRFMTFKVDELDEEPSAMMQK 106
>gi|153007914|ref|YP_001369129.1| 30S ribosomal protein S6 [Ochrobactrum anthropi ATCC 49188]
gi|166227357|sp|A6WWE6|RS6_OCHA4 RecName: Full=30S ribosomal protein S6
gi|151559802|gb|ABS13300.1| ribosomal protein S6 [Ochrobactrum anthropi ATCC 49188]
Length = 151
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + QY+ +++ NGG+V V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQYKGVLEANGGKVGKVESWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLT 105
>gi|240850219|ref|YP_002971612.1| 30S ribosomal protein S6 [Bartonella grahamii as4aup]
gi|240267342|gb|ACS50930.1| 30S ribosomal protein S6 [Bartonella grahamii as4aup]
Length = 135
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 85/124 (68%), Gaps = 6/124 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+ +I+ +GG+V + G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDITPQQVDELLSLYKGVIEAHGGKVGRIENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
+NI +P +AI E++R+MRI+E++LR +T+ V+ HE+ + + DR D+
Sbjct: 61 TLVNIDAPASAIAEVERQMRINEDILRYMTIRVEKHEKEKSAMLSHLDRNSHIGQDEERP 120
Query: 115 RFPR 118
RFPR
Sbjct: 121 RFPR 124
>gi|163759111|ref|ZP_02166197.1| 30S ribosomal protein S6 [Hoeflea phototrophica DFL-43]
gi|162283515|gb|EDQ33800.1| 30S ribosomal protein S6 [Hoeflea phototrophica DFL-43]
Length = 139
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+SSQQ++ + QY+ +I+ GG+V + G++++ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDVSSQQVEALVEQYKGVIEGLGGKVGRIEHWGLKSLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P A+ EM+R+MR +E++LR +T+ VD+HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAPAVKEMERQMRFNEDILRFMTVSVDAHEEGPSAMLQK 106
>gi|110634266|ref|YP_674474.1| 30S ribosomal protein S6 [Mesorhizobium sp. BNC1]
gi|123162195|sp|Q11H16|RS6_MESSB RecName: Full=30S ribosomal protein S6
gi|110285250|gb|ABG63309.1| SSU ribosomal protein S6P [Chelativorans sp. BNC1]
Length = 148
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 78/105 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ+ + QY+ +I+ GG+V + G++++AYRI+KNRKAY+
Sbjct: 1 MALYEHVFLARQDLSAQQVDALVEQYKGVIESGGGKVGRIENWGVKSLAYRIKKNRKAYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
M++ +P A+ EM+R+M I E++LR +T+ V++HE+ P+ +Q
Sbjct: 61 TLMDLDAPAEAVKEMERQMGISEDILRFMTIRVEAHEEGPSAMLQ 105
>gi|49474088|ref|YP_032130.1| 30S ribosomal protein S6 [Bartonella quintana str. Toulouse]
gi|61215537|sp|Q6G060|RS6_BARQU RecName: Full=30S ribosomal protein S6
gi|49239592|emb|CAF25949.1| 30s ribosomal protein s6 [Bartonella quintana str. Toulouse]
Length = 136
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 80/110 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+S+I+ +GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQVDELLSLYKSVIEAHGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI +P AI E++R+M I+E++LR +T+ V+ HE+ + R DR+
Sbjct: 61 VLINIDAPATAIAEVERQMHINEDILRYMTVRVEKHEKEKSAMFSRLDRN 110
>gi|118588141|ref|ZP_01545551.1| 30S ribosomal protein S6 [Stappia aggregata IAM 12614]
gi|118439763|gb|EAV46394.1| 30S ribosomal protein S6 [Stappia aggregata IAM 12614]
Length = 148
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + QY+ LI+ GG V V G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSAQQVEQLVEQYKGLIEGAGGTVGKVENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E++LR +T VD ++ P+ +Q+
Sbjct: 61 TLMNINAPHAAVAEMERQMGLSEDILRFMTFKVDELDEEPSAMMQK 106
>gi|306845084|ref|ZP_07477664.1| ribosomal protein S6 [Brucella sp. BO1]
gi|306274499|gb|EFM56294.1| ribosomal protein S6 [Brucella sp. BO1]
Length = 148
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ VD HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVDEHEEGQSAMLT 105
>gi|49475326|ref|YP_033367.1| 30S ribosomal protein S6 [Bartonella henselae str. Houston-1]
gi|61215539|sp|Q6G446|RS6_BARHE RecName: Full=30S ribosomal protein S6
gi|49238132|emb|CAF27340.1| 30S ribosomal protein s6 [Bartonella henselae str. Houston-1]
Length = 135
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+ +I+ GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDIAPQQVDELLNIYKGVIETYGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
V +NI +P AI E++R+MRI+E++LR +T+ V+ HE+ + R DR D+++
Sbjct: 61 VLVNIDAPATAIAEVERQMRINEDILRYMTIRVEKHEKEKSAMFSRLDRNGHIGHDEKHP 120
Query: 115 RFP 117
R P
Sbjct: 121 RSP 123
>gi|154247047|ref|YP_001418005.1| 30S ribosomal protein S6 [Xanthobacter autotrophicus Py2]
gi|226705649|sp|A7IK05|RS6_XANP2 RecName: Full=30S ribosomal protein S6
gi|154161132|gb|ABS68348.1| ribosomal protein S6 [Xanthobacter autotrophicus Py2]
Length = 152
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ+++ +++ +I+ NGG V G++++ YRI KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVEELTTRFKGVIEANGGSVGKTEYWGVKSLTYRINKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P AAI E++R+ RIDE+VLR LTL V+ HE+ P+ +Q+
Sbjct: 61 TLLNINAPAAAIQELERQQRIDEDVLRILTLRVEEHEEGPSAMLQK 106
>gi|182679259|ref|YP_001833405.1| 30S ribosomal protein S6 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226703422|sp|B2IHD1|RS6_BEII9 RecName: Full=30S ribosomal protein S6
gi|182635142|gb|ACB95916.1| ribosomal protein S6 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 151
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 82/111 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV+L RQDIS+QQ++ Q +S+I+ G+V V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVYLARQDISAQQVEALTEQLKSVIESFQGKVTKVEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+NI +P AA+ EM+R+M I+E+VLR +TL V+ HEQ P+ +++ D DD
Sbjct: 61 SLLNIEAPAAALTEMERQMGINEDVLRFMTLRVEEHEQGPSAMMRKRDDDD 111
>gi|240140757|ref|YP_002965237.1| 30S ribosomal protein S6 [Methylobacterium extorquens AM1]
gi|240010734|gb|ACS41960.1| 30S ribosomal protein S6 [Methylobacterium extorquens AM1]
Length = 148
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAAVAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|163853341|ref|YP_001641384.1| ribosomal protein S6 [Methylobacterium extorquens PA1]
gi|218532198|ref|YP_002423014.1| 30S ribosomal protein S6 [Methylobacterium chloromethanicum CM4]
gi|254563267|ref|YP_003070362.1| 30S ribosomal protein S6 [Methylobacterium extorquens DM4]
gi|226703485|sp|A9W8G4|RS6_METEP RecName: Full=30S ribosomal protein S6
gi|254765443|sp|B7L2P2|RS6_METC4 RecName: Full=30S ribosomal protein S6
gi|163664946|gb|ABY32313.1| ribosomal protein S6 [Methylobacterium extorquens PA1]
gi|218524501|gb|ACK85086.1| ribosomal protein S6 [Methylobacterium chloromethanicum CM4]
gi|254270545|emb|CAX26548.1| 30S ribosomal protein S6 [Methylobacterium extorquens DM4]
Length = 151
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAAVAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|23501356|ref|NP_697483.1| 30S ribosomal protein S6 [Brucella suis 1330]
gi|161618426|ref|YP_001592313.1| 30S ribosomal protein S6 [Brucella canis ATCC 23365]
gi|254703806|ref|ZP_05165634.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
gi|260566941|ref|ZP_05837411.1| ribosomal protein S6 [Brucella suis bv. 4 str. 40]
gi|261754453|ref|ZP_05998162.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
gi|32171565|sp|Q8G274|RS6_BRUSU RecName: Full=30S ribosomal protein S6
gi|189045456|sp|A9M8X8|RS6_BRUC2 RecName: Full=30S ribosomal protein S6
gi|23347249|gb|AAN29398.1| ribosomal protein S6 [Brucella suis 1330]
gi|161335237|gb|ABX61542.1| ribosomal protein S6 [Brucella canis ATCC 23365]
gi|260156459|gb|EEW91539.1| ribosomal protein S6 [Brucella suis bv. 4 str. 40]
gi|261744206|gb|EEY32132.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
Length = 148
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLT 105
>gi|148559735|ref|YP_001258474.1| 30S ribosomal protein S6 [Brucella ovis ATCC 25840]
gi|225626963|ref|ZP_03785002.1| ribosomal protein S6 [Brucella ceti str. Cudo]
gi|237814928|ref|ZP_04593926.1| ribosomal protein S6 [Brucella abortus str. 2308 A]
gi|148370992|gb|ABQ60971.1| 30S ribosomal protein S6 [Brucella ovis ATCC 25840]
gi|225618620|gb|EEH15663.1| ribosomal protein S6 [Brucella ceti str. Cudo]
gi|237789765|gb|EEP63975.1| ribosomal protein S6 [Brucella abortus str. 2308 A]
Length = 156
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 9 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE QS LT
Sbjct: 69 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLT 113
>gi|188583607|ref|YP_001927052.1| 30S ribosomal protein S6 [Methylobacterium populi BJ001]
gi|226703486|sp|B1ZFQ8|RS6_METPB RecName: Full=30S ribosomal protein S6
gi|179347105|gb|ACB82517.1| ribosomal protein S6 [Methylobacterium populi BJ001]
Length = 151
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAALAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|62289440|ref|YP_221233.1| 30S ribosomal protein S6 [Brucella abortus bv. 1 str. 9-941]
gi|82699366|ref|YP_413940.1| 30S ribosomal protein S6 [Brucella melitensis biovar Abortus 2308]
gi|189023690|ref|YP_001934458.1| 30S ribosomal protein S6 [Brucella abortus S19]
gi|225851991|ref|YP_002732224.1| 30S ribosomal protein S6 [Brucella melitensis ATCC 23457]
gi|254688752|ref|ZP_05152006.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|254693235|ref|ZP_05155063.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|254696881|ref|ZP_05158709.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701259|ref|ZP_05163087.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|254707816|ref|ZP_05169644.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|254709602|ref|ZP_05171413.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|254712982|ref|ZP_05174793.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|254716664|ref|ZP_05178475.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|254718631|ref|ZP_05180442.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|254729785|ref|ZP_05188363.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|256031094|ref|ZP_05444708.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|256060588|ref|ZP_05450756.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|256112979|ref|ZP_05453882.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|256159167|ref|ZP_05456980.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|256254497|ref|ZP_05460033.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|256256999|ref|ZP_05462535.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|256264502|ref|ZP_05467034.1| ribosomal protein S6 [Brucella melitensis bv. 2 str. 63/9]
gi|256368908|ref|YP_003106414.1| 30S ribosomal protein S6 [Brucella microti CCM 4915]
gi|260168225|ref|ZP_05755036.1| 30S ribosomal protein S6 [Brucella sp. F5/99]
gi|260545809|ref|ZP_05821550.1| ribosomal protein S6 [Brucella abortus NCTC 8038]
gi|260754231|ref|ZP_05866579.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|260757451|ref|ZP_05869799.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|260761276|ref|ZP_05873619.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883257|ref|ZP_05894871.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|261213478|ref|ZP_05927759.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|261218465|ref|ZP_05932746.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|261221671|ref|ZP_05935952.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|261315303|ref|ZP_05954500.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|261317130|ref|ZP_05956327.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|261320685|ref|ZP_05959882.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|261324584|ref|ZP_05963781.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|261751798|ref|ZP_05995507.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|261757686|ref|ZP_06001395.1| ribosomal protein S6 [Brucella sp. F5/99]
gi|265983610|ref|ZP_06096345.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|265988168|ref|ZP_06100725.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|265994414|ref|ZP_06106971.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|265997634|ref|ZP_06110191.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|294851833|ref|ZP_06792506.1| small subunit ribosomal protein S6 [Brucella sp. NVSL 07-0026]
gi|297247852|ref|ZP_06931570.1| small subunit ribosomal protein S6 [Brucella abortus bv. 5 str.
B3196]
gi|306839849|ref|ZP_07472647.1| ribosomal protein S6 [Brucella sp. NF 2653]
gi|306842260|ref|ZP_07474923.1| ribosomal protein S6 [Brucella sp. BO2]
gi|75497231|sp|Q57ER2|RS6_BRUAB RecName: Full=30S ribosomal protein S6
gi|91207903|sp|Q2YMG9|RS6_BRUA2 RecName: Full=30S ribosomal protein S6
gi|226703429|sp|B2S9V4|RS6_BRUA1 RecName: Full=30S ribosomal protein S6
gi|254765224|sp|C0RHG2|RS6_BRUMB RecName: Full=30S ribosomal protein S6
gi|62195572|gb|AAX73872.1| RpsF, ribosomal protein S6 [Brucella abortus bv. 1 str. 9-941]
gi|82615467|emb|CAJ10436.1| Ribosomal protein S6 [Brucella melitensis biovar Abortus 2308]
gi|189019262|gb|ACD71984.1| Ribosomal protein S6 [Brucella abortus S19]
gi|225640356|gb|ACO00270.1| ribosomal protein S6 [Brucella melitensis ATCC 23457]
gi|255999066|gb|ACU47465.1| 30S ribosomal protein S6 [Brucella microti CCM 4915]
gi|260097216|gb|EEW81091.1| ribosomal protein S6 [Brucella abortus NCTC 8038]
gi|260667769|gb|EEX54709.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|260671708|gb|EEX58529.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|260674339|gb|EEX61160.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|260872785|gb|EEX79854.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|260915085|gb|EEX81946.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|260920255|gb|EEX86908.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|260923554|gb|EEX90122.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|261293375|gb|EEX96871.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|261296353|gb|EEX99849.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|261300564|gb|EEY04061.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|261304329|gb|EEY07826.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|261737670|gb|EEY25666.1| ribosomal protein S6 [Brucella sp. F5/99]
gi|261741551|gb|EEY29477.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|262552102|gb|EEZ08092.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|262765527|gb|EEZ11316.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|263094835|gb|EEZ18573.1| ribosomal protein S6 [Brucella melitensis bv. 2 str. 63/9]
gi|264660365|gb|EEZ30626.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|264662202|gb|EEZ32463.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|294820422|gb|EFG37421.1| small subunit ribosomal protein S6 [Brucella sp. NVSL 07-0026]
gi|297175021|gb|EFH34368.1| small subunit ribosomal protein S6 [Brucella abortus bv. 5 str.
B3196]
gi|306287640|gb|EFM59087.1| ribosomal protein S6 [Brucella sp. BO2]
gi|306405035|gb|EFM61316.1| ribosomal protein S6 [Brucella sp. NF 2653]
gi|326408487|gb|ADZ65552.1| Ribosomal protein S6 [Brucella melitensis M28]
gi|326538203|gb|ADZ86418.1| ribosomal protein S6 [Brucella melitensis M5-90]
Length = 148
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLT 105
>gi|304319742|ref|YP_003853385.1| 30S ribosomal protein S6 [Parvularcula bermudensis HTCC2503]
gi|303298645|gb|ADM08244.1| ribosomal protein S6 [Parvularcula bermudensis HTCC2503]
Length = 110
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 76/110 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQDIS Q++ + Q++I+ENGGE+R G+R + Y+I KNRK +Y
Sbjct: 1 MPLYEHVFVARQDISPAQVEALTDELQTIIRENGGEIRKSEYWGLRNLQYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
MNI SP AI E++R+MRI E++LR +TL V+ H+ P+ + R DRD
Sbjct: 61 SLMNIDSPSEAIVELERQMRIKEDILRFMTLKVEEHDDEPSPVMSRRDRD 110
>gi|319408307|emb|CBI81960.1| 30S ribosomal protein S6 [Bartonella schoenbuchensis R1]
Length = 135
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 86/127 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQ ++ QQI + + Y+++I+ +GG + + G+ T+AYRIRKNRKA+Y
Sbjct: 1 MALYEHVFLARQGVTPQQIDELLKIYKNVIEAHGGTIGRIENWGLCTLAYRIRKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P AA+ E++R+MRI+E+VLR +T+ V+ HE+ + + R +++D +
Sbjct: 61 VLLNIDAPAAAMAEIERQMRINEDVLRYMTIRVEKHEKEQSAMLSRSNQEDSFSKNEERS 120
Query: 121 NVDRKQH 127
R QH
Sbjct: 121 RPTRHQH 127
>gi|83311202|ref|YP_421466.1| 30S ribosomal protein S6 [Magnetospirillum magneticum AMB-1]
gi|123542046|sp|Q2W5G8|RS6_MAGMM RecName: Full=30S ribosomal protein S6
gi|82946043|dbj|BAE50907.1| Ribosomal protein S6 [Magnetospirillum magneticum AMB-1]
Length = 144
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 77/112 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE VF+ RQDIS+ Q++ + ++I + GG V G+R IAYR++KNRK +Y
Sbjct: 1 MSLYECVFIARQDISTPQVETLTEELSNIITQGGGSVSKKEYWGLRNIAYRVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
V +NI +P AA+ EM+R+M I+E+VLR+LT+ V+ E+ P+ +Q RDDR
Sbjct: 61 VLLNIDAPSAAVKEMERQMSINEDVLRTLTIRVEELEEGPSAMMQSKSRDDR 112
>gi|17987763|ref|NP_540397.1| 30S ribosomal protein S6 [Brucella melitensis bv. 1 str. 16M]
gi|256044171|ref|ZP_05447078.1| 30S ribosomal protein S6 [Brucella melitensis bv. 1 str. Rev.1]
gi|260563529|ref|ZP_05834015.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. 16M]
gi|265990584|ref|ZP_06103141.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. Rev.1]
gi|24212309|sp|Q8YFP0|RS6_BRUME RecName: Full=30S ribosomal protein S6
gi|17983485|gb|AAL52661.1| ssu ribosomal protein s6p [Brucella melitensis bv. 1 str. 16M]
gi|260153545|gb|EEW88637.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. 16M]
gi|263001368|gb|EEZ13943.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. Rev.1]
Length = 148
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLT 103
+NI +P AA+ EM+R+MRI+E+VL LT+ V+ HE QS LT
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLSFLTVRVEEHEEGQSAMLT 105
>gi|170751791|ref|YP_001758051.1| ribosomal protein S6 [Methylobacterium radiotolerans JCM 2831]
gi|226703487|sp|B1LYI4|RS6_METRJ RecName: Full=30S ribosomal protein S6
gi|170658313|gb|ACB27368.1| ribosomal protein S6 [Methylobacterium radiotolerans JCM 2831]
Length = 154
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 78/105 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQD++SQQ++ I Y+ +I++NGG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVLLARQDVTSQQVETMIDTYKGVIEQNGGRLEKIEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+NI +PPAAI EM+R+M+I E+VLR +T+ V+ + P+ +Q
Sbjct: 61 ALLNIDAPPAAIAEMERQMQISEDVLRFMTIRVEELDSEPSAMMQ 105
>gi|307294385|ref|ZP_07574229.1| ribosomal protein S6 [Sphingobium chlorophenolicum L-1]
gi|306880536|gb|EFN11753.1| ribosomal protein S6 [Sphingobium chlorophenolicum L-1]
Length = 137
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 82/124 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ +++EN G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEENEGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +R +R DR PR
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTIKVDELEGGPSVMMRKQERSERGDRGPRGD 120
Query: 121 NVDR 124
DR
Sbjct: 121 RGDR 124
>gi|304392027|ref|ZP_07373969.1| ribosomal protein S6 [Ahrensia sp. R2A130]
gi|303296256|gb|EFL90614.1| ribosomal protein S6 [Ahrensia sp. R2A130]
Length = 121
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F+ RQD+SSQQ+ + ++ +++ NGG V + G++T+ YR++KNRKA+Y
Sbjct: 1 MALYEHIFMARQDVSSQQVDTLVEHFKGVLEANGGSVGKIENWGLKTLPYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P A+ EM+R+MRI E+VLR +T+ V+ HE +P+ +++
Sbjct: 61 ALINIDAPSDAVAEMERQMRIHEDVLRYMTVKVEEHEDAPSAMLRK 106
>gi|300023233|ref|YP_003755844.1| ribosomal protein S6 [Hyphomicrobium denitrificans ATCC 51888]
gi|299525054|gb|ADJ23523.1| ribosomal protein S6 [Hyphomicrobium denitrificans ATCC 51888]
Length = 179
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 80/111 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH FL RQD++ Q++ + ++Q +++E G+V G++ +A++I+KNRKA+Y
Sbjct: 1 MPLYEHTFLARQDVTQAQVEALMKEFQDVVEEGQGKVTKQEYWGLKNLAFKIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F NI +PPAA+ EM+R+M I+ +V+R LT+ V+ HE P++ +++ DR++
Sbjct: 61 AFFNIDAPPAAVTEMERRMGINSDVIRFLTIRVEEHETEPSVQMRKQDREE 111
>gi|260575001|ref|ZP_05843002.1| ribosomal protein S6 [Rhodobacter sp. SW2]
gi|259022623|gb|EEW25918.1| ribosomal protein S6 [Rhodobacter sp. SW2]
Length = 157
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 78/115 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQDISS Q + I + ++I +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDISSTQAESLIEHFSTVIADNGGKVVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
F+ +P AAI EM+R R+ ++V+R LT+ VD+H + P++ +Q+ D DR DR
Sbjct: 61 AFLKTDAPSAAIQEMERLARLHDDVMRVLTIKVDAHVEGPSVQMQKRDERDRGDR 115
>gi|319404043|emb|CBI77631.1| 30S ribosomal protein S6 (fragment) [Bartonella rochalimae ATCC
BAA-1498]
Length = 96
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 73/96 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQI + + Y+ +I+ NGG+V V G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRVENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +NI +P + I E++R+MRI+E++LR +T+ V+
Sbjct: 61 VLINIDAPASTIAELERQMRINEDILRYMTVRVEKQ 96
>gi|146277395|ref|YP_001167554.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides ATCC 17025]
gi|166227374|sp|A4WS85|RS6_RHOS5 RecName: Full=30S ribosomal protein S6
gi|145555636|gb|ABP70249.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides ATCC 17025]
Length = 132
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 83/126 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D +R DR R
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRDERERGDRGDRPD 120
Query: 121 NVDRKQ 126
DR +
Sbjct: 121 RGDRGE 126
>gi|296444435|ref|ZP_06886400.1| ribosomal protein S6 [Methylosinus trichosporium OB3b]
gi|296258082|gb|EFH05144.1| ribosomal protein S6 [Methylosinus trichosporium OB3b]
Length = 146
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH++L RQDIS QQ++ GQ++++I GG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHIYLARQDISPQQVEALTGQFKTIIASLGGKVSKTEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +PPAA+ E++R+ + E+VLR LTL VD+ E+ P+ +++
Sbjct: 61 TLLNIEAPPAALAEVERQQGLSEDVLRFLTLRVDALEEGPSAQLRK 106
>gi|323136067|ref|ZP_08071150.1| ribosomal protein S6 [Methylocystis sp. ATCC 49242]
gi|322399158|gb|EFY01677.1| ribosomal protein S6 [Methylocystis sp. ATCC 49242]
Length = 139
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV+L RQDIS QQ++ GQ++++I GG V G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVYLARQDISPQQVEALTGQFKNIITSLGGTVGKTEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +PPAAI EM+R+ I+E+VLR LTL V+ E+ P+ +++
Sbjct: 61 TLLNIDAPPAAIAEMERQQSINEDVLRVLTLRVEELEEGPSAQLRK 106
>gi|254473348|ref|ZP_05086745.1| 30S ribosomal protein S6 [Pseudovibrio sp. JE062]
gi|211957464|gb|EEA92667.1| 30S ribosomal protein S6 [Pseudovibrio sp. JE062]
Length = 140
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 86/134 (64%), Gaps = 17/134 (12%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ++ + Q++++++ENGG+V + G+RT+ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISTQQVEALVEQFKTVLEENGGKVGKIESWGLRTLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ--------------- 105
+ MN+ +P AA+ EM+R+ ++E++LR +T+ V+ ++ + +Q
Sbjct: 61 ILMNVDAPHAAVAEMERQQGLNEDILRFMTIRVEELDEEQSAMMQKRDRDDRRRGDRNDR 120
Query: 106 --RHDRDDRNDRFP 117
R DR R DR P
Sbjct: 121 GPRPDRGPRPDRRP 134
>gi|163797516|ref|ZP_02191467.1| Ribosomal protein S6 [alpha proteobacterium BAL199]
gi|159177265|gb|EDP61824.1| Ribosomal protein S6 [alpha proteobacterium BAL199]
Length = 158
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 75/105 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+ RQDISS Q++ I Q+ ++ GGEV+ G+R++AYRI+KNRK +Y
Sbjct: 1 MSYYESVFIARQDISSTQVEQLIEQFAEIVATGGGEVKKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V N+ +P AA+ EM+R MR++E++LR LT+ VD+ E+ P++ +Q
Sbjct: 61 VLFNLDAPAAAVSEMERLMRLNEDILRYLTVKVDALEEGPSVMMQ 105
>gi|149203936|ref|ZP_01880904.1| ribosomal protein S6 [Roseovarius sp. TM1035]
gi|149142378|gb|EDM30423.1| ribosomal protein S6 [Roseovarius sp. TM1035]
Length = 141
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+SS Q + I + +++ ENGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSSAQAEGLIEHFGAVLTENGGTLVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ----RHDRDDRNDRF 116
F+ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q R DR DR DR
Sbjct: 61 AFLKSDAPSSAVQEMERLMRLHDDVMRVLTVKVDAHEEGPSVQMQKRDERGDRPDRGDRP 120
Query: 117 PRDRNVDR 124
R DR
Sbjct: 121 DRGDRPDR 128
>gi|296285059|ref|ZP_06863057.1| 30S ribosomal protein S6 [Citromicrobium bathyomarinum JL354]
Length = 123
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 80/123 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ Q +I+ N G+V G++ +AY+I +NRKA++
Sbjct: 1 MALYEHVFLARQDLSQSQVDALAAQATEIIESNEGKVTKTETWGLKNLAYKIDRNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P A + E++R+ RI+E+V+R +T+ VD HE+ P+ +++++RD + R DR
Sbjct: 61 VLLNIEGPGAMVAELERQTRINEDVIRYMTIRVDEHEEGPSAMMRKNERDSKKRRERSDR 120
Query: 121 NVD 123
D
Sbjct: 121 GDD 123
>gi|154253798|ref|YP_001414622.1| 30S ribosomal protein S6 [Parvibaculum lavamentivorans DS-1]
gi|189045484|sp|A7HYI2|RS6_PARL1 RecName: Full=30S ribosomal protein S6
gi|154157748|gb|ABS64965.1| ribosomal protein S6 [Parvibaculum lavamentivorans DS-1]
Length = 155
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 74/105 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F+ RQD+S QQ++ Q+ ++I+E GG+V G+R +A++++KNRK +Y
Sbjct: 1 MALYEHIFIARQDVSQQQVEALTEQFSNIIKEQGGQVGKTEYWGLRNLAFKVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+NI +P AA+ EM+R+M I E+VLR +T+ V+ HE P+ +Q
Sbjct: 61 TLVNIDAPHAAVAEMERQMGISEDVLRFITVRVEEHETEPSAMMQ 105
>gi|310815619|ref|YP_003963583.1| 30S ribosomal protein S6 [Ketogulonicigenium vulgare Y25]
gi|308754354|gb|ADO42283.1| 30S ribosomal protein S6 [Ketogulonicigenium vulgare Y25]
Length = 128
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 78/115 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG V L G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSAVLADNGGAVVLSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
++ +P AA+ EM+R R+ ++V+R LT+ VD+HE P++ +Q+ D DR +R
Sbjct: 61 AYLRTDAPAAAVLEMERLARLHDDVMRVLTIKVDAHEDGPSVQMQKRDERDRGER 115
>gi|209964874|ref|YP_002297789.1| ribosomal protein S6 [Rhodospirillum centenum SW]
gi|226695121|sp|B6IN79|RS6_RHOCS RecName: Full=30S ribosomal protein S6
gi|209958340|gb|ACI98976.1| ribosomal protein S6 [Rhodospirillum centenum SW]
Length = 163
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE + + RQDI++ Q++ + +++ENGGEV+ V + G++T+ YRI+KNRKA+Y
Sbjct: 1 MALYETILIARQDITASQVEGLTETFTGILKENGGEVKKVEQWGLKTLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V++ +P AA+ EM+R M I+E+VLR +T+ V+ E+ T + ++ +R++R PR
Sbjct: 61 VYIGHEAPAAAVAEMERNMSINEDVLRFMTVKVEKIEEGQTAMLT--NKGERSERGPRGG 118
Query: 121 NVDR 124
DR
Sbjct: 119 FGDR 122
>gi|85374299|ref|YP_458361.1| 30S ribosomal protein S6 [Erythrobacter litoralis HTCC2594]
gi|84787382|gb|ABC63564.1| ribosomal protein S6 [Erythrobacter litoralis HTCC2594]
Length = 126
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 82/121 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S Q+ +I++N G+V G++ +AY+I +NRKA++
Sbjct: 6 MALYEHIFLARQDLSQSQVDALAATATDIIEKNDGKVTKTETWGLKNLAYKIDRNRKAHF 65
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P + + E++R+ RI+E+V+R +T+ V+ HE+ P++ ++++DRD++ R +R
Sbjct: 66 VMLNIEGPGSVVAELERQTRINEDVIRYMTIRVEEHEEGPSVMMRKNDRDNKKRRDREER 125
Query: 121 N 121
N
Sbjct: 126 N 126
>gi|316933693|ref|YP_004108675.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris DX-1]
gi|315601407|gb|ADU43942.1| ribosomal protein S6 [Rhodopseudomonas palustris DX-1]
Length = 158
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 18/133 (13%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEELTTQITGVIESLGGKVTKTESWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ--------------- 105
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ ++
Sbjct: 61 VLLNIDGPAAVVAEIERQERINEDVIRYLTVRVDEHEEGPSAMMRKADRDRERDDRGPRE 120
Query: 106 ---RHDRDDRNDR 115
R DR+ R DR
Sbjct: 121 GGFRGDREGRGDR 133
>gi|149184752|ref|ZP_01863070.1| ribosomal protein S6 [Erythrobacter sp. SD-21]
gi|148832072|gb|EDL50505.1| ribosomal protein S6 [Erythrobacter sp. SD-21]
Length = 121
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 80/121 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G++ +AY+I +NRKA++
Sbjct: 1 MALYEHVFLARQDLSQAQVDQLAATATEIVEANDGKVTKTETWGLKNLAYKIDRNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P A + E++R+ RI+E+V+R +T+ VD HE+ P++ +++++RD + + +R
Sbjct: 61 VMLNIEGPGAVVAELERQTRINEDVIRYMTIRVDEHEEGPSVMMRKNERDSKKRKDREER 120
Query: 121 N 121
N
Sbjct: 121 N 121
>gi|39936140|ref|NP_948416.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris CGA009]
gi|192291858|ref|YP_001992463.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris TIE-1]
gi|61216210|sp|Q6N5A4|RS6_RHOPA RecName: Full=30S ribosomal protein S6; AltName: Full=RRP-S6
gi|226695122|sp|B3Q9T5|RS6_RHOPT RecName: Full=30S ribosomal protein S6
gi|39649994|emb|CAE28518.1| possible 30S ribosomal protein S6 [Rhodopseudomonas palustris
CGA009]
gi|192285607|gb|ACF01988.1| ribosomal protein S6 [Rhodopseudomonas palustris TIE-1]
Length = 158
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 18/133 (13%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEELTTQITGVIEGLGGKVTKTESWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ--------------- 105
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ ++
Sbjct: 61 VLLNIDGPAAVVSEIERQERINEDVIRYLTVRVDEHEEGPSAMMRKADRDRERDDRGPRE 120
Query: 106 ---RHDRDDRNDR 115
R DR+ R DR
Sbjct: 121 GGFRGDREGRGDR 133
>gi|254439789|ref|ZP_05053283.1| ribosomal protein S6 [Octadecabacter antarcticus 307]
gi|198255235|gb|EDY79549.1| ribosomal protein S6 [Octadecabacter antarcticus 307]
Length = 128
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +N G+V + G++T+AY+I KNRK +Y
Sbjct: 12 MPLYEHVFIARQDLSNTQAESLIEHFSTVLSDNDGKVVMSEYWGVKTMAYKINKNRKGHY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
FM +P A+ EM+R MR+ E+V+R LT+ VD+HE+ P++ +Q+
Sbjct: 72 AFMRSDAPAPAVQEMERLMRLHEDVMRILTIKVDAHEEGPSVQMQK 117
>gi|56552121|ref|YP_162960.1| 30S ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762067|ref|ZP_04760151.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752354|ref|YP_003225247.1| 30S ribosomal protein S6 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|61216127|sp|Q5NN61|RS6_ZYMMO RecName: Full=30S ribosomal protein S6
gi|56543695|gb|AAV89849.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373533|gb|EER63120.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258551717|gb|ACV74663.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 124
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ S+I+E G+V G+R +AYRI+KNRKAYY
Sbjct: 1 MPLYEHVFLARQDLAQTQVDGLAATATSIIEEKSGKVVKTEIWGLRNLAYRIQKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + I +P AI E++R+M ++E+V+R +T+ VD+HEQ P+ ++R
Sbjct: 61 IMLEIDAPADAIQELERQMALNEDVIRYMTVRVDAHEQGPSAMMRR 106
>gi|288958518|ref|YP_003448859.1| small subunit ribosomal protein S6 [Azospirillum sp. B510]
gi|288910826|dbj|BAI72315.1| small subunit ribosomal protein S6 [Azospirillum sp. B510]
Length = 146
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + RQDIS+ Q + Q+ ++++NGG + G++T+ Y+I+KNRK +Y
Sbjct: 1 MALYECVLIARQDISAAQAEQLSEQFAQIVRDNGGTIAKSEYWGLKTLTYKIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ----RHDRDDRNDRF 116
NI +P AA+ EM+R M I E+VLR +T+ VD+ + +P+ +Q R +R +R DR
Sbjct: 61 TLFNIDAPAAAVAEMERNMSISEDVLRFMTVRVDALDANPSAMMQSRNERGERGERGDRG 120
Query: 117 PR 118
PR
Sbjct: 121 PR 122
>gi|85708887|ref|ZP_01039953.1| ribosomal protein S6 [Erythrobacter sp. NAP1]
gi|85690421|gb|EAQ30424.1| ribosomal protein S6 [Erythrobacter sp. NAP1]
Length = 137
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S Q+ +++ N G+V G++++AY+I +NRKA++
Sbjct: 17 MALYEHIFLARQDLSQAQVDALAATATEIVEANEGKVTKTETWGLKSLAYKIDRNRKAHF 76
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--RNDRFPR 118
V +NI +P + + E++R+ RI+E+V+R +T+ V+ HE+ P++ +++++RD R+DR R
Sbjct: 77 VMLNIDAPGSVVEELERQTRINEDVIRYMTIRVEEHEEGPSVMMRKNERDKKRRSDREER 136
Query: 119 D 119
D
Sbjct: 137 D 137
>gi|77463710|ref|YP_353214.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides 2.4.1]
gi|91207787|sp|Q3J1M1|RS6_RHOS4 RecName: Full=30S ribosomal protein S6
gi|77388128|gb|ABA79313.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides 2.4.1]
Length = 132
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 75/108 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MSLYEHVFIARQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRD 108
>gi|126462539|ref|YP_001043653.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides ATCC 17029]
gi|221639576|ref|YP_002525838.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides KD131]
gi|332558561|ref|ZP_08412883.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides WS8N]
gi|166227373|sp|A3PKL5|RS6_RHOS1 RecName: Full=30S ribosomal protein S6
gi|254765450|sp|B9KJP0|RS6_RHOSK RecName: Full=30S ribosomal protein S6
gi|126104203|gb|ABN76881.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides ATCC 17029]
gi|221160357|gb|ACM01337.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides KD131]
gi|332276273|gb|EGJ21588.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides WS8N]
Length = 135
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 75/108 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MSLYEHVFIARQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRD 108
>gi|86749584|ref|YP_486080.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris HaA2]
gi|123098719|sp|Q2IX91|RS6_RHOP2 RecName: Full=30S ribosomal protein S6
gi|86572612|gb|ABD07169.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris HaA2]
Length = 159
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVTKTEAWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+++R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPSAVVSEIERQERINEDIVRYLTVRVDEHEEGPSAMMRK 106
>gi|209885492|ref|YP_002289349.1| 30S ribosomal protein S6 (RRP-S6) [Oligotropha carboxidovorans OM5]
gi|226695108|sp|B6JGN7|RS6_OLICO RecName: Full=30S ribosomal protein S6
gi|209873688|gb|ACI93484.1| 30S ribosomal protein S6 (RRP-S6) [Oligotropha carboxidovorans OM5]
Length = 144
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YRI+KNRKA++
Sbjct: 1 MPYYEHVFLARQDASAQQVEELTTQITGVIEGLGGKVTKTESWGVRSLTYRIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD-DRNDR-FPR 118
V +NI P + E++R+ RI+E+++R LT+ VD E+ P+ +++ DRD +R++R PR
Sbjct: 61 VLLNIDGPATIVAEVERQERINEDIIRYLTVRVDELEEGPSAMMRKADRDRERDERGGPR 120
Query: 119 D 119
+
Sbjct: 121 E 121
>gi|144899045|emb|CAM75909.1| 30S ribosomal protein S6 [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 15/134 (11%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V L RQ++S+ Q++ I + ++ + GG V G+R IAYR++KNRKA+Y
Sbjct: 1 MPFYECVILARQEVSAPQVETLIDEMAGVLAQGGGTVAKKEFWGLRNIAYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
V +N+ SP AA+ EM+R+M ++E+VLR LT+ VD E+ P+ +Q
Sbjct: 61 VLLNLDSPSAAVKEMERQMSLNEDVLRVLTVRVDELEEGPSAMMQAKNSRDERPRREDRG 120
Query: 107 -HDRDDRNDRFPRD 119
DR R DR PR+
Sbjct: 121 FGDRGPREDRGPRE 134
>gi|115525311|ref|YP_782222.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisA53]
gi|122295615|sp|Q07LE2|RS6_RHOP5 RecName: Full=30S ribosomal protein S6
gi|115519258|gb|ABJ07242.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisA53]
Length = 157
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V + G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVVKMEAWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPSAVVAEVERQERINEDVIRYLTVRVDEHEEGPSAMMRK 106
>gi|255262950|ref|ZP_05342292.1| ribosomal protein S6 [Thalassiobium sp. R2A62]
gi|255105285|gb|EET47959.1| ribosomal protein S6 [Thalassiobium sp. R2A62]
Length = 117
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNTQAESLIEHFSTVLADNGGKVADSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD HE+ P++ +Q+
Sbjct: 61 AFLRSDAPAPAVQEMERLMRLHDDVMRVLTIKVDEHEEGPSVQMQK 106
>gi|85707089|ref|ZP_01038177.1| ribosomal protein S6 [Roseovarius sp. 217]
gi|85668375|gb|EAQ23248.1| ribosomal protein S6 [Roseovarius sp. 217]
Length = 150
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+SS Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSSAQAEGLIEHFGAVLTDNGGTLVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
F+ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q+ RD+R+
Sbjct: 61 AFLKTDAPSSAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMQK--RDERS 111
>gi|126725406|ref|ZP_01741248.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2150]
gi|126704610|gb|EBA03701.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2150]
Length = 118
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNTQAEGLIEHFTAVLADNGGKVVENEYWGIKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AI EM+R MR+ ++V+R LT+ VD+H++ P++ +Q+
Sbjct: 61 AFLKTDAPATAIQEMERLMRLHDDVMRILTIKVDAHDEGPSVQMQK 106
>gi|91977453|ref|YP_570112.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisB5]
gi|123721764|sp|Q135M8|RS6_RHOPS RecName: Full=30S ribosomal protein S6
gi|91683909|gb|ABE40211.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisB5]
Length = 160
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVTKTEAWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+++R LT+ V+ HE+ P+ +++
Sbjct: 61 VMLNIDGPSAVVAEVERQERINEDIIRYLTVRVEEHEEGPSAMMRK 106
>gi|83949660|ref|ZP_00958393.1| ribosomal protein S6 [Roseovarius nubinhibens ISM]
gi|83837559|gb|EAP76855.1| ribosomal protein S6 [Roseovarius nubinhibens ISM]
Length = 118
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNTQAEGLVEHFGTVLSDNGGKVVESEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLKSDAPAAAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|217977083|ref|YP_002361230.1| 30S ribosomal protein S6 [Methylocella silvestris BL2]
gi|254765445|sp|B8ESH8|RS6_METSB RecName: Full=30S ribosomal protein S6
gi|217502459|gb|ACK49868.1| ribosomal protein S6 [Methylocella silvestris BL2]
Length = 146
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH++L RQD+S+QQ++ Q++ +I+ GG++ V G++T+AYRI+KNRKA++
Sbjct: 1 MALYEHIYLARQDVSAQQVETLTEQFRGIIESLGGKIEKVEYWGVKTLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P AAI EM+R+ ++E+VLR LT+ V++ E + +++
Sbjct: 61 TLLNIDAPAAAITEMERQSSLNEDVLRLLTIRVEALEAGQSAMMRK 106
>gi|312113717|ref|YP_004011313.1| ribosomal protein S6 [Rhodomicrobium vannielii ATCC 17100]
gi|311218846|gb|ADP70214.1| ribosomal protein S6 [Rhodomicrobium vannielii ATCC 17100]
Length = 174
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 76/106 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH FL RQD+++QQ+ + Y+++I+E+GG+V G+++ AY+I+KNR+A+Y
Sbjct: 1 MPLYEHTFLARQDVTAQQVTGLMNTYKAVIEEHGGKVSKTEYWGLKSTAYKIKKNRRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F NI +P A+ EM+R+M I +VLR LT+ V+ ++ P++ +++
Sbjct: 61 AFFNIDAPHQAVLEMERQMGISTDVLRFLTVRVEELDEKPSIQMRK 106
>gi|114768973|ref|ZP_01446599.1| Ribosomal protein S6 [alpha proteobacterium HTCC2255]
gi|114549890|gb|EAU52771.1| Ribosomal protein S6 [alpha proteobacterium HTCC2255]
Length = 119
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 73/105 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +N G+V G++T+AY+I KNRK +Y
Sbjct: 1 MALYEHVFISRQDLSNAQAEGLIEHFSAVLSDNDGKVIDQEYWGLKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
F+ +P +A+ EM+R MR+ E+V+R +T+ VD HE+ P++ IQ
Sbjct: 61 AFLKSDAPSSAVQEMERLMRLHEDVMRVMTIRVDEHEEGPSVVIQ 105
>gi|85716344|ref|ZP_01047317.1| 30S ribosomal protein S6 [Nitrobacter sp. Nb-311A]
gi|85696860|gb|EAQ34745.1| 30S ribosomal protein S6 [Nitrobacter sp. Nb-311A]
Length = 139
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTNQITGAITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P ++E++R+ RI E+V+R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPATIVNEIERQERIHEDVIRYLTVRVDEHEEGPSAMMRK 106
>gi|92117878|ref|YP_577607.1| 30S ribosomal protein S6 [Nitrobacter hamburgensis X14]
gi|122417598|sp|Q1QKV0|RS6_NITHX RecName: Full=30S ribosomal protein S6
gi|91800772|gb|ABE63147.1| SSU ribosomal protein S6P [Nitrobacter hamburgensis X14]
Length = 147
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q +I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTNQITGVITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI E+V+R L++ V+ HE+ P+ +++
Sbjct: 61 VLLNIDGPAAVVSEIERQERIHEDVIRYLSIRVEEHEEGPSAMMRK 106
>gi|114762811|ref|ZP_01442243.1| ribosomal protein S6 [Pelagibaca bermudensis HTCC2601]
gi|114544421|gb|EAU47428.1| ribosomal protein S6 [Roseovarius sp. HTCC2601]
Length = 118
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLVEHFGTVLSDNGGKVVESEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLKTDAPATAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|75675883|ref|YP_318304.1| 30S ribosomal protein S6 [Nitrobacter winogradskyi Nb-255]
gi|91207925|sp|Q3SRY9|RS6_NITWN RecName: Full=30S ribosomal protein S6
gi|74420753|gb|ABA04952.1| SSU ribosomal protein S6P [Nitrobacter winogradskyi Nb-255]
Length = 139
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q +I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTTQITGVITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P ++E++R+ RI E+V+R LT+ VD HE P+ +++
Sbjct: 61 VLLNIDGPATIVNEIERQERIHEDVIRYLTVRVDEHEDGPSAMMRK 106
>gi|294011583|ref|YP_003545043.1| ribosomal protein S6 [Sphingobium japonicum UT26S]
gi|292674913|dbj|BAI96431.1| ribosomal protein S6 [Sphingobium japonicum UT26S]
Length = 134
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ +++E G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEEMQGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +R +R R R
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTIKVDELETGPSVMMRKQERAERGPRGERGD 120
Query: 121 NVDRKQHVSEEKPLS 135
R++ EE P
Sbjct: 121 RGPRRER--EEAPAG 133
>gi|126728810|ref|ZP_01744625.1| Ribosomal protein S6 [Sagittula stellata E-37]
gi|126710740|gb|EBA09791.1| Ribosomal protein S6 [Sagittula stellata E-37]
Length = 120
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 76/106 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++++NGG V G++T+A++I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAEGLVEHFSTVLKDNGGNVIESEYWGVKTMAFKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
++ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q+
Sbjct: 61 AYLRTDAPSSAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMQK 106
>gi|126735965|ref|ZP_01751709.1| ribosomal protein S6 [Roseobacter sp. CCS2]
gi|126714522|gb|EBA11389.1| ribosomal protein S6 [Roseobacter sp. CCS2]
Length = 117
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE-LGMRTIAYRIRKNRKAY 59
M LYEHV + RQD+S+ Q + I + +++ +NGG++ L NE G++T+AY+I KNRK +
Sbjct: 1 MPLYEHVMIARQDLSNTQAESLIEHFGTVLADNGGKL-LENEYWGVKTMAYKINKNRKGH 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
Y FM +P AI EM+R MR+ E+V+R LT+ VD+H++ P++ +Q+
Sbjct: 60 YAFMRTDAPAPAIQEMERLMRLHEDVMRVLTIKVDAHQEGPSVQMQK 106
>gi|159044729|ref|YP_001533523.1| 30S ribosomal protein S6 [Dinoroseobacter shibae DFL 12]
gi|189045465|sp|A8LQQ5|RS6_DINSH RecName: Full=30S ribosomal protein S6
gi|157912489|gb|ABV93922.1| 30S ribosomal protein S6 [Dinoroseobacter shibae DFL 12]
Length = 117
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + S++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAESLVEHFGSVLADNGGKVVDSEYWGLKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R +T+ VD H + P++ +Q+
Sbjct: 61 AFLKTDAPAPAVQEMERLMRLHDDVMRVMTIKVDEHPEGPSIQMQK 106
>gi|294677547|ref|YP_003578162.1| 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
gi|7388214|sp|O68126|RS6_RHOCA RecName: Full=30S ribosomal protein S6
gi|3128364|gb|AAC16216.1| potential 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
gi|294476367|gb|ADE85755.1| 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
Length = 144
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + ++I +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSTVIGDNGGKVLGTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R R+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 GFLRTDAPSAAVQEMERLARLHDDVMRVLTIKVDGHDEGPSVQMQK 106
>gi|90423799|ref|YP_532169.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisB18]
gi|122476387|sp|Q215T6|RS6_RHOPB RecName: Full=30S ribosomal protein S6
gi|90105813|gb|ABD87850.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisB18]
Length = 168
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q S+I+ GG+V + G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITSVIEGLGGKVVKMESWGVRSLTYRMHKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+V+R LT+ VD E+ P+ +++
Sbjct: 61 VLLNIDGPSAVVAEVERQERINEDVIRYLTVRVDELEEGPSAMMRK 106
>gi|148255213|ref|YP_001239798.1| 30S ribosomal protein S6 [Bradyrhizobium sp. BTAi1]
gi|166226804|sp|A5EI98|RS6_BRASB RecName: Full=30S ribosomal protein S6
gi|146407386|gb|ABQ35892.1| SSU ribosomal protein S6P [Bradyrhizobium sp. BTAi1]
Length = 153
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ VD E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVDELEEGPSAMMRK 106
>gi|89068232|ref|ZP_01155642.1| Ribosomal protein S6 [Oceanicola granulosus HTCC2516]
gi|89046149|gb|EAR52207.1| Ribosomal protein S6 [Oceanicola granulosus HTCC2516]
Length = 118
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + ++ +N G+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLIEHFSQVLADNDGKVVDTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD HE+ P++ +Q+
Sbjct: 61 AFLKTDAPAPAVQEMERLMRLHDDVMRVLTIRVDEHEEGPSIQMQK 106
>gi|329890141|ref|ZP_08268484.1| ribosomal protein S6 [Brevundimonas diminuta ATCC 11568]
gi|328845442|gb|EGF95006.1| ribosomal protein S6 [Brevundimonas diminuta ATCC 11568]
Length = 125
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQDIS+QQ + ++LI+ENGG V + G+R + YR++KNRKA+Y
Sbjct: 1 MALYEHTVMTRQDISAQQAEALNDTIKALIEENGGSVAKIEYWGLRNLTYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRD 110
M + PPAA+ E++R++ I+E+VLR LT+ V+ E SP L + +RD
Sbjct: 61 SLMAVDCPPAAMAEVERQLSINEDVLRWLTIRVEELDLELSPLLARRERERD 112
>gi|260427680|ref|ZP_05781659.1| ribosomal protein S6 [Citreicella sp. SE45]
gi|260422172|gb|EEX15423.1| ribosomal protein S6 [Citreicella sp. SE45]
Length = 118
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLVEHFGTVLSDNGGKIVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLRTDAPAAAVQEMERLMRLHDDVMRVLTIKVEEHAEGPSVQMQK 106
>gi|167646474|ref|YP_001684137.1| 30S ribosomal protein S6 [Caulobacter sp. K31]
gi|189045459|sp|B0SWL1|RS6_CAUSK RecName: Full=30S ribosomal protein S6
gi|167348904|gb|ABZ71639.1| ribosomal protein S6 [Caulobacter sp. K31]
Length = 126
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++L++ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALLEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPR 118
+ I +P AA+ EM+R++ I+E+VLR +T+ V+ E SP L + +R +R++R PR
Sbjct: 61 SLLAIDAPAAAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDRERGERSER-PR 119
Query: 119 D 119
D
Sbjct: 120 D 120
>gi|84684849|ref|ZP_01012749.1| Ribosomal protein S6 [Maritimibacter alkaliphilus HTCC2654]
gi|84667184|gb|EAQ13654.1| Ribosomal protein S6 [Rhodobacterales bacterium HTCC2654]
Length = 121
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNAQAEGLVEHFSTVLSDNGGKVVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +++
Sbjct: 61 AFLKTDAPSTAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMKK 106
>gi|27379190|ref|NP_770719.1| 30S ribosomal protein S6 [Bradyrhizobium japonicum USDA 110]
gi|32171527|sp|Q89MW3|RS6_BRAJA RecName: Full=30S ribosomal protein S6
gi|27352341|dbj|BAC49344.1| 30S ribosomal protein S6 [Bradyrhizobium japonicum USDA 110]
Length = 166
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MALYEHVFLARQDASPQQVEELTAQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ V+ E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVEELEEGPSAMMRK 106
>gi|295689695|ref|YP_003593388.1| 30S ribosomal protein S6 [Caulobacter segnis ATCC 21756]
gi|295431598|gb|ADG10770.1| ribosomal protein S6 [Caulobacter segnis ATCC 21756]
Length = 124
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++LI+ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALIEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+ I +P A+ EM+R++ I+E+VLR +T+ V+ + + + R DR DR +R PR+
Sbjct: 61 SLLAIDAPAPAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDRGDRPER-PRE 118
>gi|16125915|ref|NP_420479.1| 30S ribosomal protein S6 [Caulobacter crescentus CB15]
gi|221234678|ref|YP_002517114.1| 30S ribosomal protein S6 [Caulobacter crescentus NA1000]
gi|24212335|sp|Q9A7Q1|RS6_CAUCR RecName: Full=30S ribosomal protein S6
gi|254765228|sp|B8GVN6|RS6_CAUCN RecName: Full=30S ribosomal protein S6
gi|13423077|gb|AAK23647.1| ribosomal protein S6 [Caulobacter crescentus CB15]
gi|220963850|gb|ACL95206.1| SSU ribosomal protein S6P [Caulobacter crescentus NA1000]
Length = 126
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++LI+ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALIEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+ I +P A+ EM+R++ I+E+VLR +T+ V+ + + + R DR DR +R PR+
Sbjct: 61 SLLAIDAPAPAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDRGDRPER-PRE 118
>gi|299133698|ref|ZP_07026892.1| ribosomal protein S6 [Afipia sp. 1NLS2]
gi|298591534|gb|EFI51735.1| ribosomal protein S6 [Afipia sp. 1NLS2]
Length = 150
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEEFTTQITGVIEGLGGKVAKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+++R LT+ VD E+ P+ +++
Sbjct: 61 VLLNIDGPAAIVSEIERQERINEDIIRYLTVRVDELEEGPSAMMRK 106
>gi|87199437|ref|YP_496694.1| 30S ribosomal protein S6 [Novosphingobium aromaticivorans DSM
12444]
gi|123489788|sp|Q2G8G3|RS6_NOVAD RecName: Full=30S ribosomal protein S6
gi|87135118|gb|ABD25860.1| SSU ribosomal protein S6P [Novosphingobium aromaticivorans DSM
12444]
Length = 120
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 74/108 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G+R++AY+I+KNRKA++
Sbjct: 1 MPLYEHVFLARQDLSQAQVDALAAAATEIVESNEGKVTKTETWGLRSLAYKIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI + A I E++R+ +I+E+V+R +T+ VD HE P++ ++++D
Sbjct: 61 VLLNIEASGATIAELERQTQINEDVIRYMTVRVDEHEAGPSVMMRKND 108
>gi|315499769|ref|YP_004088572.1| ribosomal protein s6 [Asticcacaulis excentricus CB 48]
gi|315417781|gb|ADU14421.1| ribosomal protein S6 [Asticcacaulis excentricus CB 48]
Length = 124
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ + ++LI+E GG V + G+R + YR++KNRKA+Y
Sbjct: 1 MALYEHVVLARQDISPQQAEGLNDTLKALIEELGGSVAKIEYWGLRNLTYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPR 118
+ I +P AA+ EM+R++ I+E+V+R LT+ V+ E SP L+ R DR +R +R R
Sbjct: 61 SLLAIDAPAAAVKEMERQLSINEDVIRFLTVRVEELDLELSPVLS--RRDRPERAERSER 118
>gi|146340286|ref|YP_001205334.1| 30S ribosomal protein S6 [Bradyrhizobium sp. ORS278]
gi|166226805|sp|A4YT77|RS6_BRASO RecName: Full=30S ribosomal protein S6
gi|146193092|emb|CAL77103.1| 30S ribosomal protein S6 [Bradyrhizobium sp. ORS278]
Length = 153
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ V+ E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVEELEEGPSAMMRK 106
>gi|84517317|ref|ZP_01004671.1| ribosomal protein S6 [Loktanella vestfoldensis SKA53]
gi|84508797|gb|EAQ05260.1| ribosomal protein S6 [Loktanella vestfoldensis SKA53]
Length = 133
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE-LGMRTIAYRIRKNRKAY 59
M LYEHV + RQD+S+ Q + I + +++ +NGG++ L NE G++T+AY+I KNRK +
Sbjct: 1 MPLYEHVMIARQDLSNTQAEALIEHFGTILADNGGKL-LENEYWGVKTMAYKINKNRKGH 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
Y + +P AI EM+R MR++E+V+R LT+ VD+HE P++ +Q+
Sbjct: 60 YALLRTDAPAPAIQEMERLMRLNEDVMRVLTIKVDAHEDGPSVQMQK 106
>gi|149913882|ref|ZP_01902414.1| 30S ribosomal protein S6 [Roseobacter sp. AzwK-3b]
gi|149812166|gb|EDM71997.1| 30S ribosomal protein S6 [Roseobacter sp. AzwK-3b]
Length = 126
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 10 MPLYEHVFIARQDLSNAQAEGLIEHFGTVLSDNGGKIVDSEYWGVKTMAYKINKNRKGHY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R +T+ VD H + P++ +Q+
Sbjct: 70 SFLRTDAPAPAVQEMERLMRLHDDVMRVMTIKVDEHAEGPSVQMQK 115
>gi|254477083|ref|ZP_05090469.1| ribosomal protein S6 [Ruegeria sp. R11]
gi|214031326|gb|EEB72161.1| ribosomal protein S6 [Ruegeria sp. R11]
Length = 117
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AAI EM+R MR+ ++V+R LT+ VD+HE P++ +Q+
Sbjct: 61 SFLKTDASAAAIQEMERLMRLHDDVMRVLTIKVDAHEDGPSVQMQK 106
>gi|163736680|ref|ZP_02144099.1| 30S ribosomal protein S6 [Phaeobacter gallaeciensis BS107]
gi|163742693|ref|ZP_02150078.1| ribosomal protein S6 [Phaeobacter gallaeciensis 2.10]
gi|161383948|gb|EDQ08332.1| ribosomal protein S6 [Phaeobacter gallaeciensis 2.10]
gi|161390550|gb|EDQ14900.1| 30S ribosomal protein S6 [Phaeobacter gallaeciensis BS107]
Length = 117
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGSLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AAI EM+R MR+ ++V+R LT+ VD+HE P++ +Q+
Sbjct: 61 SFLKTDASAAAIQEMERLMRLHDDVMRVLTIKVDAHEDGPSVQMQK 106
>gi|260433336|ref|ZP_05787307.1| ribosomal protein S6 [Silicibacter lacuscaerulensis ITI-1157]
gi|260417164|gb|EEX10423.1| ribosomal protein S6 [Silicibacter lacuscaerulensis ITI-1157]
Length = 139
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 23 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNGGKLVDSEYWGVKTMAYKINKNRKGHY 82
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 83 AFLKTDAPAGAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 128
>gi|326389002|ref|ZP_08210584.1| ribosomal protein S6 [Novosphingobium nitrogenifigens DSM 19370]
gi|326206602|gb|EGD57437.1| ribosomal protein S6 [Novosphingobium nitrogenifigens DSM 19370]
Length = 120
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G+R++AY+I+KNRKA++
Sbjct: 1 MPLYEHVFLARQDLSQSQVDALAATATEIVEANQGKVTKTETWGLRSLAYKIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI +P + E++R+ I+E+++R LT+ VD E P++ ++++D
Sbjct: 61 VLLNIEAPAGVVAELERQTSINEDIIRFLTVRVDELETGPSVMMRKND 108
>gi|254464513|ref|ZP_05077924.1| ribosomal protein S6 [Rhodobacterales bacterium Y4I]
gi|206685421|gb|EDZ45903.1| ribosomal protein S6 [Rhodobacterales bacterium Y4I]
Length = 117
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPASAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|84503440|ref|ZP_01001500.1| Ribosomal protein S6 [Oceanicola batsensis HTCC2597]
gi|84388227|gb|EAQ01179.1| Ribosomal protein S6 [Oceanicola batsensis HTCC2597]
Length = 118
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLIEHFGTVLSDNGGKLVEQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLKSDAPAPAVQEMERLMRLHDDVMRVLTIRVEEHAEGPSIQMQK 106
>gi|110680235|ref|YP_683242.1| 30S ribosomal protein S6 [Roseobacter denitrificans OCh 114]
gi|123065437|sp|Q164N7|RS6_ROSDO RecName: Full=30S ribosomal protein S6
gi|109456351|gb|ABG32556.1| ribosomal protein S6 [Roseobacter denitrificans OCh 114]
Length = 117
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLSDNGGKLVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+HEM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRSDAPAPAVHEMERLMRLHDDVMRVLTIKVDEHAELPSVQMQK 106
>gi|119383642|ref|YP_914698.1| 30S ribosomal protein S6 [Paracoccus denitrificans PD1222]
gi|166227360|sp|A1B0F8|RS6_PARDP RecName: Full=30S ribosomal protein S6
gi|119373409|gb|ABL69002.1| SSU ribosomal protein S6P [Paracoccus denitrificans PD1222]
Length = 131
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + ++I +NGG+V G+RT+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSTVIADNGGKVVDNEYWGVRTLAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
++ +P AA+ EM+R R+ ++V+R LT+ VD H+ P++ +Q+
Sbjct: 61 AYLRSDAPSAAVQEMERLARLHDDVMRVLTVRVDEHKDGPSVQMQK 106
>gi|163731327|ref|ZP_02138774.1| 30S ribosomal protein S6 [Roseobacter litoralis Och 149]
gi|161394781|gb|EDQ19103.1| 30S ribosomal protein S6 [Roseobacter litoralis Och 149]
Length = 117
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLSDNGGALVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+HEM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRSDAPAPAVHEMERLMRLHDDVMRVLTIKVDEHAELPSVQMQK 106
>gi|56697142|ref|YP_167505.1| 30S ribosomal protein S6 [Ruegeria pomeroyi DSS-3]
gi|81349630|sp|Q5LR50|RS6_SILPO RecName: Full=30S ribosomal protein S6
gi|56678879|gb|AAV95545.1| ribosomal protein S6 [Ruegeria pomeroyi DSS-3]
Length = 117
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGAVLSDNGGSLVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPASAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|83591754|ref|YP_425506.1| 30S ribosomal protein S6 [Rhodospirillum rubrum ATCC 11170]
gi|91207786|sp|Q2RXC6|RS6_RHORT RecName: Full=30S ribosomal protein S6
gi|83574668|gb|ABC21219.1| SSU ribosomal protein S6P [Rhodospirillum rubrum ATCC 11170]
Length = 160
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIG-QYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M LYE V + RQDIS+ Q+ DT+G + +++ E GG V G+RT+ +RI+KNRK +
Sbjct: 1 MALYECVLIARQDISNAQV-DTMGDEVSAILSEGGGSVSKREYWGLRTLNFRIKKNRKGH 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
Y+ +NI +P A+HE+ R++R++E+V+R +T+ V+ E++P+ +Q++
Sbjct: 60 YLLLNIDAPAPAVHELDRRLRLNEDVIRHMTVKVEELEEAPSAMMQKN 107
>gi|86138736|ref|ZP_01057308.1| ribosomal protein S6 [Roseobacter sp. MED193]
gi|85824383|gb|EAQ44586.1| ribosomal protein S6 [Roseobacter sp. MED193]
Length = 117
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLVEHFGAVLADNEGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AAI EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPAAAIQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|58038781|ref|YP_190745.1| 30S ribosomal protein S6 [Gluconobacter oxydans 621H]
gi|81352549|sp|Q5FU57|RS6_GLUOX RecName: Full=30S ribosomal protein S6
gi|58001195|gb|AAW60089.1| SSU ribosomal protein S6P [Gluconobacter oxydans 621H]
Length = 160
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S Q++ + ++L+++NGG ++ G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYESVLIARNDVSQAQVETLVETIETLLKDNGGSIQKREFWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
V + + P + E++R++ ++E+VLR LTL VD +++P+ + R DDR DR
Sbjct: 61 VLLGLDCTPDTLRELERQLGLNEDVLRVLTLRVDEIDENPSSVLARKS-DDRGDR 114
>gi|254294299|ref|YP_003060322.1| ribosomal protein S6 [Hirschia baltica ATCC 49814]
gi|254042830|gb|ACT59625.1| ribosomal protein S6 [Hirschia baltica ATCC 49814]
Length = 134
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + R D+S QQ++ + + +++ E G V G+R +AY I K+RK +Y
Sbjct: 1 MAFYEHVVISRPDVSPQQVETLVEELTAIVTEKEGTVAKTEYWGLRNLAYPINKSRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTLT 103
+NI +PPAAIHE++R++RI+E+V+R LT+ V+ S E SP L+
Sbjct: 61 SLLNIDAPPAAIHEIERRLRINEDVIRFLTIKVEELSEEPSPVLS 105
>gi|99080886|ref|YP_613040.1| 30S ribosomal protein S6 [Ruegeria sp. TM1040]
gi|259418663|ref|ZP_05742580.1| ribosomal protein S6 [Silicibacter sp. TrichCH4B]
gi|123252445|sp|Q1GHT8|RS6_SILST RecName: Full=30S ribosomal protein S6
gi|99037166|gb|ABF63778.1| SSU ribosomal protein S6P [Ruegeria sp. TM1040]
gi|259344885|gb|EEW56739.1| ribosomal protein S6 [Silicibacter sp. TrichCH4B]
Length = 117
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLRSDAPSSAVQEMERLMRLHDDVMRVLTIKVEEHAEGPSVQMQK 106
>gi|89054113|ref|YP_509564.1| 30S ribosomal protein S6 [Jannaschia sp. CCS1]
gi|122498966|sp|Q28RX3|RS6_JANSC RecName: Full=30S ribosomal protein S6
gi|88863662|gb|ABD54539.1| SSU ribosomal protein S6P [Jannaschia sp. CCS1]
Length = 117
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + +++ +NGG V G++T+AY+I KNRK +Y
Sbjct: 1 MALYEHVMIARQDLSNAQAEALNEHFGAVLADNGGTVVDTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
++ +P A+ EM+R MR+ ++V+R LT+ VD+H++ P++ +Q+
Sbjct: 61 SYLRTDAPSDAVQEMERLMRLHDDVMRVLTIKVDAHDEGPSVQMQK 106
>gi|162149103|ref|YP_001603564.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545154|ref|YP_002277383.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|189045471|sp|A9H1N0|RS6_GLUDA RecName: Full=30S ribosomal protein S6
gi|161787680|emb|CAP57276.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532831|gb|ACI52768.1| ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
Length = 161
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE VF+ R D+S QQ++ +L++ +GG V+ G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYETVFIARNDVSQQQVEAVADGIAALLETDGGAVKKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH-DRDDRNDRFPR 118
+ + + + P I E++R++ ++E+V+R LTL VD +++P++ + R D +R R P+
Sbjct: 61 MLLGLDAKPETIKEIERQLGLNEDVMRVLTLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|329850895|ref|ZP_08265740.1| ribosomal protein S6 [Asticcacaulis biprosthecum C19]
gi|328841210|gb|EGF90781.1| ribosomal protein S6 [Asticcacaulis biprosthecum C19]
Length = 125
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEH + RQDIS QQ + Q + LI++NGG + + G+R + YR++KNRK +Y
Sbjct: 1 MPFYEHTVIARQDISPQQAEALNDQLKHLIEDNGGHIAKIEYWGLRNLTYRVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ I +P AA+ EM+R++ I+E+V+R LT+ V+ + + + R DR +R +R
Sbjct: 61 SLLAIDAPAAAVKEMERQLGINEDVIRFLTVRVEELDLELSPILSRRDRPERAER 115
>gi|94497410|ref|ZP_01303980.1| ribosomal protein S6 [Sphingomonas sp. SKA58]
gi|94423041|gb|EAT08072.1| ribosomal protein S6 [Sphingomonas sp. SKA58]
Length = 141
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 72/108 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ ++++ G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEDMDGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTVKVDELETGPSVMMRKQE 108
>gi|296532306|ref|ZP_06895045.1| 30S ribosomal protein S6 [Roseomonas cervicalis ATCC 49957]
gi|296267382|gb|EFH13268.1| 30S ribosomal protein S6 [Roseomonas cervicalis ATCC 49957]
Length = 171
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D++ Q++ Q S+I E GGEV+ G+R +AYRI+KNRKA+Y
Sbjct: 16 MPLYETVLIARNDLTQAQVEAIADQVTSVITEAGGEVKKREYWGLRGLAYRIKKNRKAHY 75
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD---DRNDRFP 117
+ + + P AA E+ R++ ++E+VLR +TL +++ +++P+ + + D DR R P
Sbjct: 76 MLLGLDCPAAAEQEVARQLGLNEDVLRHMTLRIEAIDEAPSAILAKRGDDRERDRGFRGP 135
Query: 118 R 118
R
Sbjct: 136 R 136
>gi|114328878|ref|YP_746035.1| 30S ribosomal protein S6 [Granulibacter bethesdensis CGDNIH1]
gi|122326173|sp|Q0BPZ0|RS6_GRABC RecName: Full=30S ribosomal protein S6
gi|114317052|gb|ABI63112.1| SSU ribosomal protein S6P [Granulibacter bethesdensis CGDNIH1]
Length = 154
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D++ QQ++ SLI+ GG ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYESVLIARNDVTQQQVESVADHVASLIEAEGGAIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ + + + PA I E++R++R++E+VLR +T+ V+ + P++ + R DDR F
Sbjct: 61 MLLGLDAKPATITEVERQLRLNEDVLRFMTIRVEEIDDVPSVILSRKS-DDRERGF 115
>gi|254487872|ref|ZP_05101077.1| ribosomal protein S6 [Roseobacter sp. GAI101]
gi|214044741|gb|EEB85379.1| ribosomal protein S6 [Roseobacter sp. GAI101]
Length = 120
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AI EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAIQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|163746684|ref|ZP_02154041.1| 30S ribosomal protein S6 [Oceanibulbus indolifex HEL-45]
gi|161379798|gb|EDQ04210.1| 30S ribosomal protein S6 [Oceanibulbus indolifex HEL-45]
Length = 117
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAVQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|83943161|ref|ZP_00955621.1| ribosomal protein S6 [Sulfitobacter sp. EE-36]
gi|83954296|ref|ZP_00963016.1| ribosomal protein S6 [Sulfitobacter sp. NAS-14.1]
gi|83841333|gb|EAP80503.1| ribosomal protein S6 [Sulfitobacter sp. NAS-14.1]
gi|83846169|gb|EAP84046.1| ribosomal protein S6 [Sulfitobacter sp. EE-36]
Length = 120
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAVQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|197105009|ref|YP_002130386.1| ribosomal protein S6 [Phenylobacterium zucineum HLK1]
gi|196478429|gb|ACG77957.1| ribosomal protein S6 [Phenylobacterium zucineum HLK1]
Length = 222
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQDIS QQ + Q ++LI++ GG V + G+R + YRI+KNRK +Y
Sbjct: 103 MALYEHVVISRQDISPQQAEALNDQLKALIEQGGGSVAKIEYWGLRNLTYRIKKNRKGHY 162
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLT 103
+ I +P A+ EM+R++ I+E+VLR +T+ VD E SP L
Sbjct: 163 SLLAIDAPADAVKEMERQLSINEDVLRYMTVRVDELDLELSPILA 207
>gi|126739373|ref|ZP_01755066.1| ribosomal protein S6 [Roseobacter sp. SK209-2-6]
gi|126719473|gb|EBA16182.1| ribosomal protein S6 [Roseobacter sp. SK209-2-6]
Length = 117
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 71/106 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLADNEGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 SFLRTDASAAAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|114569763|ref|YP_756443.1| 30S ribosomal protein S6 [Maricaulis maris MCS10]
gi|122316233|sp|Q0AQD2|RS6_MARMM RecName: Full=30S ribosomal protein S6
gi|114340225|gb|ABI65505.1| SSU ribosomal protein S6P [Maricaulis maris MCS10]
Length = 117
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F++R D+S Q++ + + ++LI+E GG+ + G+R ++YRI K+RK +Y
Sbjct: 1 MALYEHIFIVRPDVSPAQMESLLEETKALIEEKGGKTGKIEYWGLRNLSYRINKSRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
++I + I+E++R R+ E+V+R +TL V++H + P+ + + +DDR R R+R
Sbjct: 61 GLIDIDAEADVINELERLQRLSEDVIRHMTLRVEAHTEEPSAILTK--KDDRRGR--RER 116
Query: 121 N 121
N
Sbjct: 117 N 117
>gi|254454531|ref|ZP_05067968.1| ribosomal protein S6 [Octadecabacter antarcticus 238]
gi|198268937|gb|EDY93207.1| ribosomal protein S6 [Octadecabacter antarcticus 238]
Length = 111
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 70/100 (70%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+F+ RQD+S+ Q + I + +++ +N G+V + G++T+AY+I KNRK +Y F+
Sbjct: 1 MFIARQDLSNTQAEALIEHFSTVLSDNDGKVVMSEYWGVKTMAYKINKNRKGHYAFLRSD 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+P A+ EM+R MR+ E+V+R LT+ VD+HE+ P++ +Q+
Sbjct: 61 APAPAVQEMERLMRLHEDVMRILTIKVDAHEEGPSVQMQK 100
>gi|254417739|ref|ZP_05031463.1| ribosomal protein S6, putative [Brevundimonas sp. BAL3]
gi|196183916|gb|EDX78892.1| ribosomal protein S6, putative [Brevundimonas sp. BAL3]
Length = 147
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 8/124 (6%)
Query: 1 MKLYEHVFLLRQDISSQQ---IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M LYEH + RQDIS+QQ + DTI + LI + GG V + G+R + YR++KNRK
Sbjct: 20 MALYEHTVMTRQDISAQQAEALNDTI---KDLIVQGGGSVAKIEYWGLRNLTYRVKKNRK 76
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDR 115
A+Y + + +PPAA+ E++R++ I+E+VLR LT+ V+ E SP L + +R+ +R
Sbjct: 77 AHYSLLAVDAPPAAMAEVERQLGINEDVLRWLTVRVEELDLELSPLLARRERERERERER 136
Query: 116 FPRD 119
PRD
Sbjct: 137 TPRD 140
>gi|296116663|ref|ZP_06835273.1| 30S ribosomal protein S6 [Gluconacetobacter hansenii ATCC 23769]
gi|295976875|gb|EFG83643.1| 30S ribosomal protein S6 [Gluconacetobacter hansenii ATCC 23769]
Length = 167
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S QQ++ ++++ G ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDVSQQQVETIADGIATVLEAESGSIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-HDRDDRNDRFPR 118
+ + + + PAAI E++R++ ++E+VLR L L VD +++P++ + R D +R R P+
Sbjct: 61 MLLGLDATPAAIKEIERQLSLNEDVLRVLMLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|114800162|ref|YP_760858.1| 30S ribosomal protein S6 [Hyphomonas neptunium ATCC 15444]
gi|123323137|sp|Q0C085|RS6_HYPNA RecName: Full=30S ribosomal protein S6
gi|114740336|gb|ABI78461.1| ribosomal protein S6 [Hyphomonas neptunium ATCC 15444]
Length = 112
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + R DIS Q++ I + + ++E G V G+R++AY I+K RK +Y
Sbjct: 1 MALYEHVVITRPDISPAQVESFIEEMTTFLKEKGATVGKTEYWGLRSLAYPIKKQRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+NI P AIHE++R+ RI E+V+R +T+ V++ P+ + R +R
Sbjct: 61 SLINIDGPADAIHELERRQRIAEDVMRYMTVRVETLSDEPSPVLSRKER 109
>gi|330993921|ref|ZP_08317851.1| 30S ribosomal protein S6 [Gluconacetobacter sp. SXCC-1]
gi|329758867|gb|EGG75381.1| 30S ribosomal protein S6 [Gluconacetobacter sp. SXCC-1]
Length = 161
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S QQ++ + ++ G V+ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDVSQQQVEAIADGIATYLEAESGSVKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH-DRDDRNDRFPR 118
+ + + + AAI E++R++ ++E+VLR LTL VD +++P++ + R D +R R P+
Sbjct: 61 MLLGLDASSAAIKEIERQLSLNEDVLRVLTLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|294084211|ref|YP_003550969.1| 30S ribosomal protein S6 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663784|gb|ADE38885.1| Ribosomal protein S6 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 146
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 69/105 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE VF+ RQD+SS Q++ ++ +I GG ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MRLYESVFIARQDVSSTQVEAMADEFAGIITSTGGSIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V N+ + + E +R M ++E+VLR + + ++ +++P++ +Q
Sbjct: 61 VMFNMETDSDTLKEYERIMGLNEDVLRFMNIRIEEVDEAPSIMMQ 105
>gi|329114158|ref|ZP_08242920.1| 30S ribosomal protein S6 [Acetobacter pomorum DM001]
gi|326696234|gb|EGE47913.1| 30S ribosomal protein S6 [Acetobacter pomorum DM001]
Length = 160
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R DIS QQ+ + + I+ +GG VR G+R++AYRI+KNRK +Y
Sbjct: 8 MPLYETVLIARNDISQQQVDAILDGIAAQIEADGGAVRKREYWGLRSLAYRIKKNRKGHY 67
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ + + + E++R++ ++E+VLR LTL V+ +++P+ + R DDR DR
Sbjct: 68 ALLGLEARSELVKEIERQLALNEDVLRLLTLRVEEIDEAPSPVLSRKG-DDRGDR 121
>gi|258542089|ref|YP_003187522.1| 30S ribosomal protein S6 [Acetobacter pasteurianus IFO 3283-01]
gi|256633167|dbj|BAH99142.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-01]
gi|256636224|dbj|BAI02193.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-03]
gi|256639279|dbj|BAI05241.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-07]
gi|256642333|dbj|BAI08288.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-22]
gi|256645388|dbj|BAI11336.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-26]
gi|256648443|dbj|BAI14384.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-32]
gi|256651496|dbj|BAI17430.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654487|dbj|BAI20414.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-12]
Length = 153
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R DIS QQ+ + + I+ +GG VR G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDISQQQVDAILDGIAAQIEADGGAVRKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ + + + E++R++ ++E+VLR +TL V+ +++P+ + R DDR DR
Sbjct: 61 ALLGLEARSELVKEIERQLALNEDVLRLMTLRVEEIDETPSPVLSRKG-DDRGDR 114
>gi|302383704|ref|YP_003819527.1| ribosomal protein S6 [Brevundimonas subvibrioides ATCC 15264]
gi|302194332|gb|ADL01904.1| ribosomal protein S6 [Brevundimonas subvibrioides ATCC 15264]
Length = 127
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 1 MKLYEHVFLLRQDISSQQ---IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M LYEH + RQDIS+QQ + DTI + LI GG V + G+R + YR++KNRK
Sbjct: 1 MALYEHTVMSRQDISAQQAEALNDTI---KDLIVAGGGSVAKIEYWGLRNLTYRVKKNRK 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLT 103
A+Y + I PP A+ E++R++ I+E+VLR LT+ V+ E SP L
Sbjct: 58 AHYSLLAIDCPPPAMAEVERQLGINEDVLRWLTVRVEELDLELSPLLA 105
>gi|254510771|ref|ZP_05122838.1| ribosomal protein S6 [Rhodobacteraceae bacterium KLH11]
gi|221534482|gb|EEE37470.1| ribosomal protein S6 [Rhodobacteraceae bacterium KLH11]
Length = 110
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 65/99 (65%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+ RQD+S+ Q + + + +++ +NGG V G++T+AY+I KNRK +Y F+ +
Sbjct: 1 MIARQDLSNAQAESLVEHFGTVLADNGGNVVDSEYWGVKTMAYKINKNRKGHYSFLKTDA 60
Query: 68 PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 PAGAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 99
>gi|332185227|ref|ZP_08386976.1| ribosomal protein S6 [Sphingomonas sp. S17]
gi|332014951|gb|EGI57007.1| ribosomal protein S6 [Sphingomonas sp. S17]
Length = 130
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 67/101 (66%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+FL RQD++ Q+ ++++N G+V G+R++AY+I KNRKA+YV + I
Sbjct: 1 MFLARQDLAQAQVDALAEAATKIVEDNQGKVVKTETWGLRSLAYKIAKNRKAHYVMLEID 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+P + E++R+ +I+E+V+R +T+ VD HE+ P++ +++
Sbjct: 61 APAGVVAELERQTQINEDVIRYMTVKVDGHEEGPSVMMRKQ 101
>gi|157803226|ref|YP_001491775.1| 30S ribosomal protein S6 [Rickettsia canadensis str. McKiel]
gi|166227376|sp|A8EXA7|RS6_RICCK RecName: Full=30S ribosomal protein S6
gi|157784489|gb|ABV72990.1| 30S ribosomal protein S6 [Rickettsia canadensis str. McKiel]
Length = 121
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQDIS I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDISLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGSNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + P E++RKM+++EN++R LT+ D S E SP L
Sbjct: 61 YFLGLDITPNVKEEIERKMKLNENIIRFLTIKADAISSEPSPML 104
>gi|83945281|ref|ZP_00957630.1| 30S ribosomal protein S6 [Oceanicaulis alexandrii HTCC2633]
gi|83851451|gb|EAP89307.1| 30S ribosomal protein S6 [Oceanicaulis alexandrii HTCC2633]
Length = 116
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 69/115 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVF+ R D+S Q++ I + ++LI+E GG+V G+RT+AYR+ KNRK +Y
Sbjct: 1 MNKYEHVFIARPDVSPAQVESAIEELKALIEEKGGKVHKTEYWGLRTLAYRMNKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
++++ + + + + R ++V+R +T VD + P+ +++ + R +R
Sbjct: 61 GYLDMEAGNEVLEALDYRQRFADDVMRYMTCRVDELNEEPSAVLRKGEDRKRRER 115
>gi|254459893|ref|ZP_05073309.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2083]
gi|206676482|gb|EDZ40969.1| ribosomal protein S6 [Rhodobacteraceae bacterium HTCC2083]
Length = 110
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 66/99 (66%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y F+ +
Sbjct: 1 MIARQDLSNTQAEGLIEHFGTVLADNGGKLVDHEYWGVKTMAYKINKNRKGHYAFLRSDA 60
Query: 68 PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
P A+ EM+R MR+ E+V+R LT+ +D H + P++ +Q+
Sbjct: 61 PAPAVQEMERLMRLHEDVMRVLTIKMDDHAELPSVQMQK 99
>gi|15603918|ref|NP_220433.1| 30S ribosomal protein S6 [Rickettsia prowazekii str. Madrid E]
gi|6226109|sp|Q9ZEA6|RS6_RICPR RecName: Full=30S ribosomal protein S6
gi|3860609|emb|CAA14510.1| 30S RIBOSOMAL PROTEIN S6 (rpsF) [Rickettsia prowazekii]
Length = 121
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ I E++RKM+++EN++R LT+ D S E SP L
Sbjct: 61 YFLGIDITSNVKEELERKMKLNENIIRFLTIKADSISSEPSPIL 104
>gi|148260512|ref|YP_001234639.1| ribosomal protein S6 [Acidiphilium cryptum JF-5]
gi|166226792|sp|A5FYN8|RS6_ACICJ RecName: Full=30S ribosomal protein S6
gi|146402193|gb|ABQ30720.1| SSU ribosomal protein S6P [Acidiphilium cryptum JF-5]
Length = 158
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 65/104 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R +I+ QQ+ + ++ G V+ G+R +AYRI+KNRK +Y
Sbjct: 1 MPLYECVLIARSEITQQQVDTIADAVTAQVESESGAVKKREYWGLRNLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V + + + PA I EM+R++ ++E+VLR +T+ V+ +++P+ +
Sbjct: 61 VLLGLDAEPATISEMERQLGLNEDVLRFMTVRVEDIDEAPSAPL 104
>gi|91204937|ref|YP_537292.1| 30S ribosomal protein S6 [Rickettsia bellii RML369-C]
gi|122426077|sp|Q1RKB1|RS6_RICBR RecName: Full=30S ribosomal protein S6
gi|91068481|gb|ABE04203.1| 30S ribosomal protein S6 [Rickettsia bellii RML369-C]
Length = 120
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+R +AY+I ++K +Y
Sbjct: 1 MSFYESVFIVRQDVSLNDIDKIVDDFSKIIKDNNGAIVKKEYWGLRALAYKIGNHKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
+ + + PA E++RKM+++EN++R LT VD S+E SP L
Sbjct: 61 YLLGLDTTPAVKQELERKMKLNENIIRFLTQKVDSISNEPSPIL 104
>gi|157827735|ref|YP_001496799.1| 30S ribosomal protein S6 [Rickettsia bellii OSU 85-389]
gi|166227375|sp|A8GY12|RS6_RICB8 RecName: Full=30S ribosomal protein S6
gi|157803039|gb|ABV79762.1| 30S ribosomal protein S6 [Rickettsia bellii OSU 85-389]
Length = 120
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+R +AY+I ++K +Y
Sbjct: 1 MSFYESVFIVRQDVSLNDIDKIVDDFTKIIKDNNGAIVKKEYWGLRALAYKIGNHKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
+ + + PA E++RKM+++EN++R LT VD S+E SP L
Sbjct: 61 YLLGLDTTPAVKQELERKMKLNENIIRFLTQKVDSISNEPSPIL 104
>gi|103487384|ref|YP_616945.1| 30S ribosomal protein S6 [Sphingopyxis alaskensis RB2256]
gi|122984936|sp|Q1GRW0|RS6_SPHAL RecName: Full=30S ribosomal protein S6
gi|98977461|gb|ABF53612.1| SSU ribosomal protein S6P [Sphingopyxis alaskensis RB2256]
Length = 122
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVF+ RQD+S Q+ +I E G+V G++ +AY+I+KNRK +Y
Sbjct: 1 MPFYEHVFIARQDLSQAQVDALAETVTGVIGEYKGQVHKTETWGLKQLAYKIQKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V ++ AI E++R+ I+E+++R +T+ VD E+ P++ +++
Sbjct: 61 VMLSAEVSGEAIAEIERQAAINEDIIRWMTIKVDELEKGPSVMMRK 106
>gi|292571635|gb|ADE29550.1| 30S ribosomal protein S6 [Rickettsia prowazekii Rp22]
Length = 145
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ I E++RKM+++EN++R LT+ D S E SP L
Sbjct: 85 YFLGIDITSNVKEELERKMKLNENIIRFLTIKADSISSEPSPIL 128
>gi|162022125|ref|YP_246159.2| 30S ribosomal protein S6 [Rickettsia felis URRWXCal2]
gi|91207788|sp|Q4UN64|RS6_RICFE RecName: Full=30S ribosomal protein S6
Length = 121
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIVKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
F+ + E++RKM+++EN++R LT+ DS P+
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPS 101
>gi|157825189|ref|YP_001492909.1| 30S ribosomal protein S6 [Rickettsia akari str. Hartford]
gi|157799147|gb|ABV74401.1| 30S ribosomal protein S6 [Rickettsia akari str. Hartford]
Length = 142
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 22 MSFYESVFIIRQDVSLNDIDKIVDDFVKIIKDNNGTIIKKEYWGIRTLAYKIGNNKKGHY 81
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ I E++RKM+++EN++R LT+ D S E SP L
Sbjct: 82 YFLGIDVTCNVKEELERKMKLNENIIRFLTIKTDSISSEPSPIL 125
>gi|51473302|ref|YP_067059.1| 30S ribosomal protein S6 [Rickettsia typhi str. Wilmington]
gi|61216179|sp|Q68XR5|RS6_RICTY RecName: Full=30S ribosomal protein S6
gi|51459614|gb|AAU03577.1| 30S ribosomal protein S6 [Rickettsia typhi str. Wilmington]
Length = 121
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNDGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ I E++RKM+++E+++R LT+ VD S E SP L
Sbjct: 61 YFLGIDITSNIKEELERKMKLNESIIRFLTIKVDSISSEPSPIL 104
>gi|67004068|gb|AAY60994.1| 30S ribosomal protein S6 [Rickettsia felis URRWXCal2]
Length = 129
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 9 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIVKKEYWGLRTLAYKIGNNKKGHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
F+ + E++RKM+++EN++R LT+ DS P+
Sbjct: 69 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPS 109
>gi|161723851|ref|NP_359701.2| 30S ribosomal protein S6 [Rickettsia conorii str. Malish 7]
gi|20139897|sp|Q92JK3|RS6_RICCN RecName: Full=30S ribosomal protein S6
Length = 121
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 104
>gi|157827935|ref|YP_001494177.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|238650506|ref|YP_002916358.1| 30S ribosomal protein S6 [Rickettsia peacockii str. Rustic]
gi|166227377|sp|A8GQJ4|RS6_RICRS RecName: Full=30S ribosomal protein S6
gi|259495343|sp|C4K159|RS6_RICPU RecName: Full=30S ribosomal protein S6
gi|157800416|gb|ABV75669.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|238624604|gb|ACR47310.1| 30S ribosomal protein S6 [Rickettsia peacockii str. Rustic]
Length = 121
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 104
>gi|224438131|ref|ZP_03659066.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
gi|313144571|ref|ZP_07806764.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
gi|313129602|gb|EFR47219.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
Length = 136
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 63/98 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IK I ++ +I +NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MKFYETMFILKPTLVEEEIKARIDFFKEVITKNGGEIETCLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + P+ I E++R RI+E +LR + + +S ++
Sbjct: 61 FVIYFKAEPSLILELERNYRINEEILRFIVIKYESKKE 98
>gi|34580978|ref|ZP_00142458.1| 30S ribosomal protein S6 [Rickettsia sibirica 246]
gi|28262363|gb|EAA25867.1| 30S ribosomal protein S6 [Rickettsia sibirica 246]
Length = 121
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 104
>gi|307721626|ref|YP_003892766.1| 30S ribosomal protein S6P [Sulfurimonas autotrophica DSM 16294]
gi|306979719|gb|ADN09754.1| SSU ribosomal protein S6P [Sulfurimonas autotrophica DSM 16294]
Length = 153
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 64/96 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++++I+ +I + +I NGGE+ N +GMR +AY I KN + YY
Sbjct: 1 MRHYENLVIVKPTFTAEEIQASIKAVEEVITSNGGEIAATNAMGMRKLAYPIDKNERGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + PAAI E++R+ RI+E++LR +T+ DS+
Sbjct: 61 YVIYYSVAPAAIAEIERRFRINEDLLRFVTIKYDSN 96
>gi|165932623|ref|YP_001649412.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. Iowa]
gi|165907710|gb|ABY72006.1| SSU ribosomal protein S6P [Rickettsia rickettsii str. Iowa]
Length = 133
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 13 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 73 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 116
>gi|326403704|ref|YP_004283786.1| 30S ribosomal protein S6 [Acidiphilium multivorum AIU301]
gi|325050566|dbj|BAJ80904.1| 30S ribosomal protein S6 [Acidiphilium multivorum AIU301]
Length = 158
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 64/104 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R +I+ QQ+ + ++ G V+ G+R +AYRI+KNRK +Y
Sbjct: 1 MPLYECVLIARSEITQQQVDTIADAVTAQVESESGAVKKREYWGLRNLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V + + + P I EM+R++ ++E+VLR +T+ V+ +++P+ +
Sbjct: 61 VLLGLDAEPVTISEMERQLGLNEDVLRFMTVRVEDIDEAPSAPL 104
>gi|157165390|ref|YP_001467164.1| 30S ribosomal protein S6 [Campylobacter concisus 13826]
gi|166226813|sp|A7ZEF6|RS6_CAMC1 RecName: Full=30S ribosomal protein S6
gi|112801440|gb|EAT98784.1| ribosomal protein S6 [Campylobacter concisus 13826]
Length = 139
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++K + + +I +NGGE+ V E+G R +AY I+K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVKAKVDFVKEVITKNGGEIATVIEMGTRKLAYTIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL---------TIQRHDRDD 111
+ +PPA + E+ R +RI E+++R L++ ++ + TI++ R+
Sbjct: 61 FVIYYKAPPALLAELTRNVRITEDIIRFLSVKYENKREIAAWERLCKGIKQTIKKEPREP 120
Query: 112 RNDRFPRDRNVDRKQHVSE 130
R R PR VD + E
Sbjct: 121 RAPREPRVEKVDEQTFTEE 139
>gi|239946940|ref|ZP_04698693.1| 30S ribosomal protein S6 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921216|gb|EER21240.1| 30S ribosomal protein S6 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 145
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPSPIL 128
>gi|229586274|ref|YP_002844775.1| 30S ribosomal protein S6 [Rickettsia africae ESF-5]
gi|15619101|gb|AAL02602.1| 30S ribosomal protein S6 [Rickettsia conorii str. Malish 7]
gi|228021324|gb|ACP53032.1| 30S ribosomal protein S6 [Rickettsia africae ESF-5]
Length = 145
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 128
>gi|157964104|ref|YP_001498928.1| 30S ribosomal protein S6 [Rickettsia massiliae MTU5]
gi|157843880|gb|ABV84381.1| 30S ribosomal protein S6 [Rickettsia massiliae MTU5]
Length = 145
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVNDFAKIIKDNNGTIIKKEYWGVRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
F+ + E++RKM+++EN++R LT+ D S E SP L
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPIL 128
>gi|154175471|ref|YP_001407996.1| 30S ribosomal protein S6 [Campylobacter curvus 525.92]
gi|166226814|sp|A7GXQ4|RS6_CAMC5 RecName: Full=30S ribosomal protein S6
gi|112803344|gb|EAU00688.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
(Polyprenylp-hydroxybenzoate decarboxylase)
[Campylobacter curvus 525.92]
Length = 142
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++K + + +I +NGGE+ V E+G R +AY I+K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVKAKVDFVKEVITKNGGEIATVVEMGTRKLAYTIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL---------TIQRHDRDD 111
+ +PP + E+ R +RI E+++R L++ ++ + TI++ R+
Sbjct: 61 FVIYYKAPPTLLAELTRNIRITEDIIRFLSVKYENKREIAAWERLCKGIKQTIKKEPREP 120
Query: 112 RNDRFPRDRNVDR--KQHVSEE 131
R R PR+ ++ +Q SEE
Sbjct: 121 REPRAPREPKAEKIEEQTFSEE 142
>gi|225023644|ref|ZP_03712836.1| hypothetical protein EIKCOROL_00507 [Eikenella corrodens ATCC
23834]
gi|224943526|gb|EEG24735.1| hypothetical protein EIKCOROL_00507 [Eikenella corrodens ATCC
23834]
Length = 124
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++LI E+GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTLITESGGHIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI PAAI E++ R ++ VLR LT+ +D E SP +
Sbjct: 60 VLMNIECTPAAIEELETGFRFNDAVLRHLTIKMDEAVTEASPMM 103
>gi|224418788|ref|ZP_03656794.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|253826689|ref|ZP_04869574.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|313142305|ref|ZP_07804498.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|253510095|gb|EES88754.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|313131336|gb|EFR48953.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
Length = 142
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEITQKIDFYKAAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+ + P + E++R RI+E++LR + + DS ++ +
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEDILRFIVIKYDSKKEQKAWEV 104
>gi|119513487|ref|ZP_01632511.1| Ribosomal protein S6 [Nodularia spumigena CCY9414]
gi|119461867|gb|EAW42880.1| Ribosomal protein S6 [Nodularia spumigena CCY9414]
Length = 113
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D+ +Q++ I +YQ L+ E G E + G R +AY I+K+R YV
Sbjct: 4 VYETIYILRPDLGEEQVEQAIAKYQGLLTEQGAENIEIQNRGKRRLAYEIKKHRDGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN P AI M+R MR+ E V+R LT+ D
Sbjct: 64 MNYTGPGTAIAPMERAMRLSEEVIRYLTIKQD 95
>gi|32266035|ref|NP_860067.1| 30S ribosomal protein S6 [Helicobacter hepaticus ATCC 51449]
gi|61215713|sp|Q7VIR8|RS6_HELHP RecName: Full=30S ribosomal protein S6
gi|32262084|gb|AAP77133.1| ribosomal protein S6 [Helicobacter hepaticus ATCC 51449]
Length = 137
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + +IK + ++ +I +NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MKFYETMFILKPTLVEVEIKARLDFFKEVIIKNGGEIETCLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQS 99
+ + P+ I E++R RI+E +LR + + +S EQS
Sbjct: 61 FVIYFKAQPSLILELERNYRINEEILRFIVIKYESKKEQS 100
>gi|242310275|ref|ZP_04809430.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
gi|239523572|gb|EEQ63438.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
Length = 145
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEIVQKIDFYKTAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLTIQRHDRDDRNDRF--- 116
+ + P + E++R RI+E++LR + + DS EQ T+ DR N +
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEDILRFIVIKYDSKKEQKAWETL--VDRAINNKKATPL 118
Query: 117 --PRDRNVDRKQHVSEE 131
P+++ V+++ ++E
Sbjct: 119 KEPKEKAVEKEAPKAQE 135
>gi|22298822|ref|NP_682069.1| 30S ribosomal protein S6 [Thermosynechococcus elongatus BP-1]
gi|32171538|sp|Q8DJE6|RS6_THEEB RecName: Full=30S ribosomal protein S6
gi|22295003|dbj|BAC08831.1| 30S ribosomal protein S6 [Thermosynechococcus elongatus BP-1]
Length = 114
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 58/90 (64%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D+ +Q++ TI Q+++ ++E G V G R AY I+K R+ YY+ M
Sbjct: 6 YETLYIIRPDVGEEQLEQTISQFRTFLEEQGATKLKVQNRGKRRFAYPIKKLREGYYILM 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+P AI ++R MR++EN+LR +T+++
Sbjct: 66 TYTAPGTAIAPLERAMRLNENILRFMTIVL 95
>gi|254457666|ref|ZP_05071094.1| 30S ribosomal protein S6 [Campylobacterales bacterium GD 1]
gi|207086458|gb|EDZ63742.1| 30S ribosomal protein S6 [Campylobacterales bacterium GD 1]
Length = 151
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++++I+ +I + +I NGGE+ + +GMR +AY I KN + YY
Sbjct: 1 MRNYENLVIVKPTFTAEEIQSSIKAIEEVITSNGGEIATTDSMGMRKLAYPINKNERGYY 60
Query: 61 --VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++ +IA P+AI E++R+ RI+E++LR +T+ D++
Sbjct: 61 HVIYYSIA--PSAISEIERRFRINEDLLRFVTIKYDTN 96
>gi|319957605|ref|YP_004168868.1| SSU ribosomal protein s6p [Nitratifractor salsuginis DSM 16511]
gi|319420009|gb|ADV47119.1| SSU ribosomal protein S6P [Nitratifractor salsuginis DSM 16511]
Length = 154
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 60/91 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ +++++I+ I + + +I ENGGE++ +E+GMR +AY I K + YY
Sbjct: 1 MNCYETLFVVKPTLTAEEIEGQIARVKEIIAENGGELKATDEMGMRRLAYPIEKQERGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P + E++R++R +E +LR +T+
Sbjct: 61 TVVYYTAPSEMVIELERQLRYNEEILRFMTV 91
>gi|238021235|ref|ZP_04601661.1| hypothetical protein GCWU000324_01133 [Kingella oralis ATCC 51147]
gi|237868215|gb|EEP69221.1| hypothetical protein GCWU000324_01133 [Kingella oralis ATCC 51147]
Length = 124
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+S+I E GG++ + + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKSMITEAGGKIHRLEDWGRRQLAYQINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MNI + PA I E++ R ++ VLR LT+ + P++ +Q
Sbjct: 60 VLMNIEATPAIIEELETGFRFNDAVLRHLTIQKKAAVTEPSVMMQ 104
>gi|237750843|ref|ZP_04581323.1| ribosomal protein S6 [Helicobacter bilis ATCC 43879]
gi|229373288|gb|EEO23679.1| ribosomal protein S6 [Helicobacter bilis ATCC 43879]
Length = 145
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+L+ + ++IK I ++ +I +NGG + ++GMR +AY+I+KN + YY
Sbjct: 1 MRHYETAFVLKPTLVEEEIKAKIDFFKEVILKNGGHIETCLDMGMRNLAYQIKKNSRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLT-IQRHDR--------- 109
+ + P I E++R I+E VLR + + +S EQ T ++R +
Sbjct: 61 FCIYFKADPTLIAELERLYGINEEVLRFIVIKYESKKEQEAWKTLVERAKKPEKPRTLKK 120
Query: 110 -DDRNDRFPRDRNVDRKQHVSE 130
+DR +R P+ NV ++ S+
Sbjct: 121 DEDRAERTPKKENVQNEEQSSQ 142
>gi|291277459|ref|YP_003517231.1| putative 30S ribosomal protein S6 [Helicobacter mustelae 12198]
gi|290964653|emb|CBG40508.1| putative 30S ribosomal protein S6 [Helicobacter mustelae 12198]
Length = 139
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++I I Y+ I +NGG ++ ++GMR +AY I+KN++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIASKIEFYKEAITKNGGSIQTTLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP--- 117
+ + P+ + E++R RI+E+VLR + + +S ++ H DR ++ P
Sbjct: 61 FVIYFQANPSLVLELERLYRINEDVLRFIVIKYESKKEQKAW----HALVDRANKKPHAS 116
Query: 118 ------RDRNVDRKQHVSEE 131
++ ++ +H SEE
Sbjct: 117 TSRPKSEEKTEEQAEHKSEE 136
>gi|34558168|ref|NP_907983.1| 30S ribosomal protein S6 [Wolinella succinogenes DSM 1740]
gi|61216265|sp|Q7MQZ8|RS6_WOLSU RecName: Full=30S ribosomal protein S6
gi|34483887|emb|CAE10883.1| HYPOTHETICAL PROTEIN-Ribosomal protein S6 [Wolinella
succinogenes]
Length = 137
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 63/98 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I + I Y+ I +NGGE+ ++GMR +AY I KN++ YY
Sbjct: 1 MRHYETMFIVKPTLTPEEIVEKINFYKEAIIKNGGEICATQDMGMRNLAYEINKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ S P+ + E++R RI+E++LR + + +S ++
Sbjct: 61 FVVYFKSAPSLVIELERLYRINEDILRFIVIKYESKKE 98
>gi|268316169|ref|YP_003289888.1| 30S ribosomal protein S6 [Rhodothermus marinus DSM 4252]
gi|262333703|gb|ACY47500.1| ribosomal protein S6 [Rhodothermus marinus DSM 4252]
Length = 144
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++ +S QIK+ I + I+E+GGE+ ++E G R +AY I+K R YYV
Sbjct: 7 FYELTYIINAALSDDQIKEVIRRVNQYIEEHGGEIVEIDEWGTRRLAYPIQKRRNGYYVN 66
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M +P + I ++R + IDE VLR LTL +D+
Sbjct: 67 MYFRAPASLIAALERFLEIDEQVLRYLTLRMDA 99
>gi|237753479|ref|ZP_04583959.1| 30S ribosomal protein S6 [Helicobacter winghamensis ATCC BAA-430]
gi|229375746|gb|EEO25837.1| 30S ribosomal protein S6 [Helicobacter winghamensis ATCC BAA-430]
Length = 128
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 61/98 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEITQKIDFYKAAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + P + E++R RI+E +LR + + +S ++
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEEILRFIVIKYESKKE 98
>gi|198284527|ref|YP_002220848.1| 30S ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666120|ref|YP_002427194.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226703409|sp|B7J917|RS6_ACIF2 RecName: Full=30S ribosomal protein S6
gi|226703410|sp|B5EPA0|RS6_ACIF5 RecName: Full=30S ribosomal protein S6
gi|198249048|gb|ACH84641.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518333|gb|ACK78919.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 134
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ +I+ +GG + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPQMIERYRGMIESDGGHFHRLEDWGRRQLAYPIKKAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
V MNI A+ E++ R ++ VLR L L D SP+ + D DR +R
Sbjct: 60 VLMNIECSSVALAELEDAFRFNDAVLRHLILARDEAVTSPSFLAR--DETDRRER 112
>gi|294788328|ref|ZP_06753571.1| ribosomal protein S6 [Simonsiella muelleri ATCC 29453]
gi|294483759|gb|EFG31443.1| ribosomal protein S6 [Simonsiella muelleri ATCC 29453]
Length = 127
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVNAMVERYKTMITEAGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + PA + E++ R ++ VLR LT+ S E SP +
Sbjct: 60 VLMNIEATPATVDELETAFRFNDAVLRHLTIQTKSAITEASPMM 103
>gi|289607152|emb|CBI60876.1| unnamed protein product [Sordaria macrospora]
Length = 121
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 17/108 (15%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ ++Q+ G+V NRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVQDMNGKV-----------------NRKAHY 43
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V + I +P + E++R+ +I+E+V+R +T+ VD+HE+ PT+ +++ +
Sbjct: 44 VMLEIDAPGDVVAELERQTQINEDVIRFMTVKVDAHEEGPTVMMRKSE 91
>gi|124009488|ref|ZP_01694164.1| ribosomal protein S6 [Microscilla marina ATCC 23134]
gi|123984937|gb|EAY24900.1| ribosomal protein S6 [Microscilla marina ATCC 23134]
Length = 124
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S +QIKDT+ ++Q ++ +NG E+ V+ GM+ +AY I+K Y +
Sbjct: 6 YETVFILTPVLSDEQIKDTVEKFQKILADNGAEIVHVDHWGMKKLAYPIKKKTSGVYTVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P + ++ + R DE V+R + +++D H
Sbjct: 66 EFKAPSTIVKALETEYRRDERVMRHICIVLDKH 98
>gi|294669618|ref|ZP_06734685.1| hypothetical protein NEIELOOT_01519 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308531|gb|EFE49774.1| hypothetical protein NEIELOOT_01519 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 121
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ EN G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKALVTENNGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + PA I E++ R ++ VLR LT+
Sbjct: 60 VLMNIEATPAVIEELETGFRFNDAVLRHLTI 90
>gi|119492201|ref|ZP_01623611.1| Ribosomal protein S6 [Lyngbya sp. PCC 8106]
gi|119453258|gb|EAW34424.1| Ribosomal protein S6 [Lyngbya sp. PCC 8106]
Length = 119
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D+ +Q+ I +YQ L+QE GG+ + LG R +AY I +R+ YV
Sbjct: 5 VYETMYILRPDLIDEQVDVAIAKYQDLLQEQGGQNIQIQNLGKRRLAYEIDNHREGVYVL 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
MN P I M+R MRI ++V+R LT
Sbjct: 65 MNYDGPGHQIAVMERAMRISDDVIRYLT 92
>gi|254413827|ref|ZP_05027596.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
gi|196179424|gb|EDX74419.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
Length = 109
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+S +Q+ + +Y+ L+QE GGE + G R +AY I ++R+ Y+ M
Sbjct: 5 YEMMYILRPDMSEEQVNQAVTKYKDLLQEQGGEEIEIQHRGKRRLAYPIERHREGVYIQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +PP + +++R MR + V+R LTL
Sbjct: 65 NYKAPPIHVAQLQRAMRYGDEVIRYLTL 92
>gi|71083408|ref|YP_266127.1| 30S ribosomal protein S6 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762169|ref|ZP_01264134.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1002]
gi|91207928|sp|Q4FMR5|RS6_PELUB RecName: Full=30S ribosomal protein S6
gi|71062521|gb|AAZ21524.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1062]
gi|91717971|gb|EAS84621.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1002]
Length = 121
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQD S Q+K +Y ++++N GE+ + G+ +AY I+KN+K Y
Sbjct: 1 MNLYEHTIVARQDTSPAQVKQLTEKYSKIVEKNEGEIVQTEDWGLLNLAYIIKKNKKGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ I P I E+++ ID+N+LR +T+ V
Sbjct: 61 MHFKIKGPGKIIDELEKNEAIDKNLLRYMTVKV 93
>gi|161579540|ref|YP_114470.2| 30S ribosomal protein S6 [Methylococcus capsulatus str. Bath]
gi|61215443|sp|Q606H8|RS6_METCA RecName: Full=30S ribosomal protein S6
Length = 136
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ I +Y+S+I+ G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSGQVPAMIERYRSIIEGAAGRIHRLEDWGRRQLAYPIAKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A + E++ R ++ VLRSLT+ D P+ + R D DR P D
Sbjct: 60 VLMNIECDQATLEELESGFRFNDAVLRSLTIRRDEAVTEPS-ALARSGSDAEADRAPADE 118
Query: 121 N 121
Sbjct: 119 G 119
>gi|325265835|ref|ZP_08132521.1| 30S ribosomal protein S6 [Kingella denitrificans ATCC 33394]
gi|324982473|gb|EGC18099.1| 30S ribosomal protein S6 [Kingella denitrificans ATCC 33394]
Length = 169
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 46 MRHYEIVFIVHPD-QSEQVNAMVERYKTMITEAGGKIHRLEDWGRRQLAYPINKIHKAHY 104
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + PA + E++ R ++ +LR LT+ + + E SP +
Sbjct: 105 VLMNIEATPATVEELETGFRFNDAILRHLTIQMKAAVTEASPMM 148
>gi|17232294|ref|NP_488842.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120]
gi|24212311|sp|Q8YMX2|RS6_ANASP RecName: Full=30S ribosomal protein S6
gi|17133939|dbj|BAB76501.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120]
Length = 108
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D++ +Q++ I +YQ+L+QE G V G R +AY I+K R +YV
Sbjct: 4 VYETLYILRPDLTDEQVELAIAKYQNLLQEQGATDLEVQNRGKRRLAYEIKKQRDGFYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +P AI ++R MR+ E V+R LT+
Sbjct: 64 FNYNAPGKAIAILERAMRLSEEVIRYLTV 92
>gi|258512888|ref|YP_003186322.1| 30S ribosomal protein S6 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479614|gb|ACV59933.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + ++Q + I +YQS++ + GG++ + E+G R +AY I +R+ YY
Sbjct: 1 MRQYETMYIVNPSLEAEQTAEVIQRYQSIVTDKGGQIDELQEIGKRRLAYEIDGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V M E++R MRID+NV+R LT+ V
Sbjct: 61 VLMKFTCDTETPKELERLMRIDDNVIRYLTVRV 93
>gi|322381357|ref|ZP_08055360.1| 30S ribosomal protein S6-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154933|gb|EFX47204.1| 30S ribosomal protein S6-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI Q++ T+ ++Q +I NGGE+ + +G R +AY I+K R +Y
Sbjct: 1 MRKYEIMYIIRPDIEQDQVQATVEKFQGIITNNGGEITKHDVMGKRRLAYEIKKFRDGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + P + E+ R M+I + ++R L +
Sbjct: 61 VLVNFTAEPEVVKELDRVMKISDEIIRYLIV 91
>gi|226315509|ref|YP_002775405.1| 30S ribosomal protein S6 [Brevibacillus brevis NBRC 100599]
gi|254765223|sp|C0ZA47|RS6_BREBN RecName: Full=30S ribosomal protein S6
gi|226098459|dbj|BAH46901.1| 30S ribosomal protein S6 [Brevibacillus brevis NBRC 100599]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ +++K + +Y ++ GGE+ + E+G R +AY I K R+ YY
Sbjct: 1 MRQYEVMYVLRPDLEEEKVKSNVARYSDVVTNYGGEISKLQEMGKRRLAYEINKFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN + A+ E +R M+I+++V+R + +
Sbjct: 61 VLMNFKANSDAVAEAERLMKINDDVIRFMFV 91
>gi|329119368|ref|ZP_08248054.1| 30S ribosomal protein S6 [Neisseria bacilliformis ATCC BAA-1200]
gi|327464513|gb|EGF10812.1| 30S ribosomal protein S6 [Neisseria bacilliformis ATCC BAA-1200]
Length = 122
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ EN G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKALVTENNGVIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + PA I E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPAVIEELETGFRFNDAVLRHLTI 90
>gi|315453473|ref|YP_004073743.1| putative 30S ribosomal protein S6 [Helicobacter felis ATCC 49179]
gi|315132525|emb|CBY83153.1| putative 30S ribosomal protein S6 [Helicobacter felis ATCC 49179]
Length = 140
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IK+ + YQ I + GG + ++G+R +AY I+K ++ YY
Sbjct: 1 MKHYETMFILKSTMVEEEIKEKLAFYQEAINKQGGVIEATLDMGIRQLAYEIKKQKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLTIQRHDRDDRNDRFPRD 119
+ + A+ E++R RI+E+VLR + L +S EQ T+ DR +
Sbjct: 61 FVIYFKAQAHAVLELERLYRINEDVLRFIILKYESKKEQKAWQTL--------VDRALKK 112
Query: 120 RNVDRKQHVSEEKPLS 135
+ KQ + E+ P S
Sbjct: 113 PGTETKQRLKEQAPES 128
>gi|75908293|ref|YP_322589.1| 30S ribosomal protein S6 [Anabaena variabilis ATCC 29413]
gi|91207901|sp|Q3MBE2|RS6_ANAVT RecName: Full=30S ribosomal protein S6
gi|75702018|gb|ABA21694.1| SSU ribosomal protein S6P [Anabaena variabilis ATCC 29413]
Length = 108
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D++ +Q++ I +YQ+L+QE G V G R +AY I+K R +YV
Sbjct: 4 VYETLYILRPDLTDEQVELAIAKYQNLLQEQGATDIEVQNRGKRRLAYEIKKQRDGFYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +P AI ++R MR+ E V+R LT+
Sbjct: 64 FNYNAPGKAIAILERAMRLSEEVIRYLTV 92
>gi|261855981|ref|YP_003263264.1| ribosomal protein S6 [Halothiobacillus neapolitanus c2]
gi|261836450|gb|ACX96217.1| ribosomal protein S6 [Halothiobacillus neapolitanus c2]
Length = 142
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ +I+ +GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYRGIIETSGGTVHRLEDWGRRQLAYPINKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MN+ + AA+ E++ R ++ VLR LT ++ E P++ +
Sbjct: 60 VMMNVEASQAAVAELEEAFRFNDAVLRHLTSRMEEAETEPSIIM 103
>gi|20809110|ref|NP_624281.1| 30S ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
gi|24212292|sp|Q8R6M1|RS6_THETN RecName: Full=30S ribosomal protein S6
gi|20517788|gb|AAM25885.1| Ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
Length = 95
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D++ ++ K I ++++LI E GGE+ +E G R +AY I+K + YY
Sbjct: 1 MRSYETMYVLSPDLNEEERKGLIERFKNLIVERGGEITNFDEWGKRKLAYPIQKKSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S P E++R RI + VLR L + D
Sbjct: 61 VLMNFNSSPDVSRELERVYRITDGVLRYLIIRTD 94
>gi|302390768|ref|YP_003826589.1| SSU ribosomal protein S6P [Thermosediminibacter oceani DSM 16646]
gi|302201396|gb|ADL08966.1| SSU ribosomal protein S6P [Thermosediminibacter oceani DSM 16646]
Length = 95
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L ++ + I + ++++LI+E GGEV+ ++ G R +AY I ++ YY
Sbjct: 1 MREYETMYILDPELDEESINGLVDKFKALIEERGGEVKEIDRWGKRRLAYPISHRKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN ++ P+A EM+R +I VLR +
Sbjct: 61 VVMNFSATPSAAQEMERVFKITTGVLRHIIF 91
>gi|323705826|ref|ZP_08117398.1| ribosomal protein S6 [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534822|gb|EGB24601.1| ribosomal protein S6 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 95
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D++ + I ++++LI E GGE+ V+E G + +AY I K + YY
Sbjct: 1 MRAYETIFIISPDVNDEARPALIEKFKNLITEKGGEITKVDEWGRKKLAYEIDKKTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S HE++R +I + +LR L + VD
Sbjct: 61 VLMNFTSNVDVPHELERVYKITDGILRYLIVKVD 94
>gi|304318116|ref|YP_003853261.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779618|gb|ADL70177.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 95
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D++ + I ++++LI E GGE+ V+E G R +AY I K + YY
Sbjct: 1 MRSYETIFIISPDVNDEARPALIEKFKNLITEKGGEITNVDEWGRRKLAYEIDKKSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S HE++R +I + +LR L + VD
Sbjct: 61 VLMNFNSDVDVPHELERVYKITDGILRYLIVKVD 94
>gi|270265014|ref|ZP_06193277.1| 30S ribosomal protein S6 [Serratia odorifera 4Rx13]
gi|270040948|gb|EFA14049.1| 30S ribosomal protein S6 [Serratia odorifera 4Rx13]
Length = 132
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ + D SEE
Sbjct: 120 ETSDDADAGDSEE 132
>gi|229917470|ref|YP_002886116.1| 30S ribosomal protein S6 [Exiguobacterium sp. AT1b]
gi|259495334|sp|C4L008|RS6_EXISA RecName: Full=30S ribosomal protein S6
gi|229468899|gb|ACQ70671.1| ribosomal protein S6 [Exiguobacterium sp. AT1b]
Length = 95
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K I ++ ++I ENGG V ++G R AY I K R+ +Y
Sbjct: 1 MRKYELLYIIRPSVDEEAKKALIERFNNVITENGGTVEKTTDMGKRRFAYEINKMREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +NI + P AI E +R M+I ++V+R +T
Sbjct: 61 VLLNIVAEPKAILETERLMKISDDVVRQMT 90
>gi|254784759|ref|YP_003072187.1| 30S ribosomal protein S6 [Teredinibacter turnerae T7901]
gi|259495345|sp|C5BN45|RS6_TERTT RecName: Full=30S ribosomal protein S6
gi|237684065|gb|ACR11329.1| ribosomal protein S6 [Teredinibacter turnerae T7901]
Length = 151
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y S ++++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTSAVKDSGGSVHRLEDWGRRQMAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRN 113
V MNI A+ E+ R ++ +LR++ + D E+SP ++ +R+ +N
Sbjct: 60 VLMNIECGDQALEELTTNFRYNDAILRNMVIRCDEAVTEESPIQKAEKENRERKN 114
>gi|109946866|ref|YP_664094.1| 30S ribosomal protein S6 [Helicobacter acinonychis str. Sheeba]
gi|123362772|sp|Q17Z31|RS6_HELAH RecName: Full=30S ribosomal protein S6
gi|109714087|emb|CAJ99095.1| 30S ribosomal protein S6 [Helicobacter acinonychis str. Sheeba]
Length = 142
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHNGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
M + P+ I E++R RI+E+VLR + + DS ++ H DR ++ P
Sbjct: 61 YVMYFKAEPSMILELERLYRINEDVLRFIVIKYDSKKEVEAW----HALVDRANKKP 113
>gi|218291073|ref|ZP_03495096.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius LAA1]
gi|218238958|gb|EED06165.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius LAA1]
Length = 95
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + ++Q + I +YQ+++ + GG++ + E+G R +AY I +R+ YY
Sbjct: 1 MRQYETMYIVNPSLEAEQTAEVIQRYQAIVTDKGGQIDELQEIGKRRLAYEIDGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V M E++R MRID+NV+R LT+ V
Sbjct: 61 VLMKFTCDTETPKEIERLMRIDDNVIRYLTVRV 93
>gi|157368693|ref|YP_001476682.1| 30S ribosomal protein S6 [Serratia proteamaculans 568]
gi|167011248|sp|A8G8W4|RS6_SERP5 RecName: Full=30S ribosomal protein S6
gi|157320457|gb|ABV39554.1| ribosomal protein S6 [Serratia proteamaculans 568]
Length = 132
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|332970410|gb|EGK09402.1| 30S ribosomal protein S6 [Kingella kingae ATCC 23330]
Length = 124
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEASGKIHRLEDWGRRQLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + PA + E++ R ++ VLR LT+ + E SP +
Sbjct: 60 VLMNIEATPATVEELETAFRFNDAVLRHLTIQTKAAVTEASPMM 103
>gi|289579515|ref|YP_003478142.1| ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|297545638|ref|YP_003677940.1| 30S ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529228|gb|ADD03580.1| ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|296843413|gb|ADH61929.1| ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 95
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIVENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSDSKVSQELERVYKITDGVLRYLIIRTD 94
>gi|163857369|ref|YP_001631667.1| 30S ribosomal protein S6 [Bordetella petrii DSM 12804]
gi|226703426|sp|A9ITA2|RS6_BORPD RecName: Full=30S ribosomal protein S6
gi|163261097|emb|CAP43399.1| 30S ribosomal protein S6 [Bordetella petrii]
Length = 125
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQTLVTGQGGAVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI A + E++ R ++ VLR L + + SP++ ++ +R++
Sbjct: 60 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTSPSIMMKSVEREE 110
>gi|167855347|ref|ZP_02478114.1| 30S ribosomal protein S6 [Haemophilus parasuis 29755]
gi|219871262|ref|YP_002475637.1| 30S ribosomal protein S6 [Haemophilus parasuis SH0165]
gi|254765440|sp|B8F5T7|RS6_HAEPS RecName: Full=30S ribosomal protein S6
gi|167853495|gb|EDS24742.1| 30S ribosomal protein S6 [Haemophilus parasuis 29755]
gi|219691466|gb|ACL32689.1| 30S ribosomal protein S6 [Haemophilus parasuis SH0165]
Length = 126
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ +P I E++ R ++ VLRSL L + E SP L
Sbjct: 60 VLMNVEAPQNVIDELETNFRYNDAVLRSLVLHTKAAVTEASPML 103
>gi|322379728|ref|ZP_08054041.1| 30S ribosomal protein S6 [Helicobacter suis HS5]
gi|321147877|gb|EFX42464.1| 30S ribosomal protein S6 [Helicobacter suis HS5]
Length = 135
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 60/95 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IKD + YQ +I ++GGEV ++G R +AY I+K+++ YY
Sbjct: 1 MKHYETMFILKPTLVEEEIKDKLAFYQEVITKSGGEVVNTLDMGHRNLAYEIQKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + E++R RI+E++LR + L +S
Sbjct: 61 FVIYFTAHADVVLELERLYRINEDILRFMILKYES 95
>gi|126665194|ref|ZP_01736177.1| ribosomal protein S6 [Marinobacter sp. ELB17]
gi|126630564|gb|EBA01179.1| ribosomal protein S6 [Marinobacter sp. ELB17]
Length = 138
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y SLI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFMVHPD-QSEQVPAMIERYTSLITEDGGQVDRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQ-RHDRDDRNDRFP 117
V MNI A+ E+ R ++ ++R L L D + SP + + R DR D P
Sbjct: 60 VLMNIQCSQTAMDELTHNFRFNDAIIRELILRRDEAVTDMSPMKSAESREDRRPSGDDRP 119
Query: 118 R 118
R
Sbjct: 120 R 120
>gi|254455872|ref|ZP_05069301.1| ribosomal protein S6 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082874|gb|EDZ60300.1| ribosomal protein S6 [Candidatus Pelagibacter sp. HTCC7211]
Length = 117
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQD S +IK +Y ++++N GE+ G+ ++Y I+KN+K +
Sbjct: 1 MNLYEHTIIARQDTSPSEIKQLTEKYSKIVEKNEGEIVKTENWGLINLSYLIKKNKKGSF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ I I E+++ ID+ +LR LT+ V + +R D D +
Sbjct: 61 IHFKIKGKGNVIEELEKNEAIDKKLLRYLTVKVKKFDLDTNYFTKREDDDKK 112
>gi|83589001|ref|YP_429010.1| 30S ribosomal protein S6 [Moorella thermoacetica ATCC 39073]
gi|91207918|sp|Q2RM72|RS6_MOOTA RecName: Full=30S ribosomal protein S6
gi|83571915|gb|ABC18467.1| SSU ribosomal protein S6P [Moorella thermoacetica ATCC 39073]
Length = 98
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++R D+ ++ + ++ LI + GG+V V++ G + +AY +RK R+ YY
Sbjct: 1 MRNYEVVFVIRPDLEAEATTAVVEKFTQLITDQGGQVTRVDQWGKKRMAYEVRKYREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V + PA E++R ++I ++V+R L
Sbjct: 61 VLVEFKGTPAVAQELERVLKISDDVIRYL 89
>gi|332143174|ref|YP_004428912.1| 30S ribosomal protein S6 [Alteromonas macleodii str. 'Deep
ecotype']
gi|226703415|sp|B4S012|RS6_ALTMD RecName: Full=30S ribosomal protein S6
gi|327553196|gb|AEA99914.1| 30S ribosomal protein S6 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 133
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++++++GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQDGGQVHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-RDDRNDRFPRD 119
V +N + A+ E++ R ++ +LR++ + + P+ ++ R+ R+D PR
Sbjct: 60 VLINAEATAEAVDELENAFRFNDVILRNMVMRTKTAVTEPSPMMKEEPRRERRDDSAPRQ 119
Query: 120 RNVDRKQHVSEE 131
++K +E+
Sbjct: 120 ERAEKKTETTED 131
>gi|212640666|ref|YP_002317186.1| 30S ribosomal protein S6 [Anoxybacillus flavithermus WK1]
gi|212562146|gb|ACJ35201.1| Ribosomal protein S6 [Anoxybacillus flavithermus WK1]
Length = 98
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ ENG E+ V E G R +AY I K R YY
Sbjct: 4 MRKYEIMYIIRPNMEEEARKAVVERFNNVLTENGAEITNVKEWGKRRLAYEIEKFRDGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ + PAA+ E R RI E+++R + +
Sbjct: 64 MILNVVAKPAAVQEFDRLARISEDIIRHIVV 94
>gi|255066236|ref|ZP_05318091.1| ribosomal protein S6 [Neisseria sicca ATCC 29256]
gi|255049446|gb|EET44910.1| ribosomal protein S6 [Neisseria sicca ATCC 29256]
Length = 123
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEAGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + P + E++ R ++ VLR LT+ E SP L
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|120555298|ref|YP_959649.1| 30S ribosomal protein S6 [Marinobacter aquaeolei VT8]
gi|166226978|sp|A1U393|RS6_MARAV RecName: Full=30S ribosomal protein S6
gi|120325147|gb|ABM19462.1| SSU ribosomal protein S6P [Marinobacter aquaeolei VT8]
Length = 137
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y S+I E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTSVITEDGGKVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQ-RHDRDDRNDRFP 117
V MNI AA+ E+ R ++ ++R L L D + SP + R DR D P
Sbjct: 60 VLMNIECSQAAMDELTHNFRFNDAIIRDLILRRDEAVTDLSPMKAAESREDRRSGGDDRP 119
Query: 118 RDRNVDRKQ 126
R R+ D ++
Sbjct: 120 R-RSADSEE 127
>gi|78777857|ref|YP_394172.1| 30S ribosomal protein S6 [Sulfurimonas denitrificans DSM 1251]
gi|91207800|sp|Q30PZ4|RS6_SULDN RecName: Full=30S ribosomal protein S6
gi|78498397|gb|ABB44937.1| SSU ribosomal protein S6P [Sulfurimonas denitrificans DSM 1251]
Length = 137
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 63/96 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ +++++I+ I + +I NGGE+ + +GMR +AY + KN + Y+
Sbjct: 1 MRNYENLVIVKPTLTAEEIQANISAIEEIITSNGGEIAARDAMGMRKLAYPLGKNERGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P+AI E++R+ RI+E +LR +T+ D++
Sbjct: 61 HVIYYSVDPSAISEIERRFRINEELLRFVTIKYDTN 96
>gi|292493501|ref|YP_003528940.1| ribosomal protein S6 [Nitrosococcus halophilus Nc4]
gi|291582096|gb|ADE16553.1| ribosomal protein S6 [Nitrosococcus halophilus Nc4]
Length = 148
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQLPAMIERYRQLIETDGGRIHRLEDWGRRQLAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ P AI E+ R ++ VLR + +
Sbjct: 60 VLMNVECTPQAIEELTSAFRFNDAVLRDVVM 90
>gi|167038654|ref|YP_001666232.1| 30S ribosomal protein S6 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167041004|ref|YP_001663989.1| 30S ribosomal protein S6 [Thermoanaerobacter sp. X514]
gi|256751476|ref|ZP_05492354.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus CCSD1]
gi|300913785|ref|ZP_07131102.1| ribosomal protein S6 [Thermoanaerobacter sp. X561]
gi|307725529|ref|YP_003905280.1| 30S ribosomal protein S6 [Thermoanaerobacter sp. X513]
gi|320117046|ref|YP_004187205.1| 30S ribosomal protein S6 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|226695294|sp|B0K8G4|RS6_THEP3 RecName: Full=30S ribosomal protein S6
gi|226695295|sp|B0K5L9|RS6_THEPX RecName: Full=30S ribosomal protein S6
gi|166855244|gb|ABY93653.1| ribosomal protein S6 [Thermoanaerobacter sp. X514]
gi|166857488|gb|ABY95896.1| ribosomal protein S6 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749695|gb|EEU62721.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus CCSD1]
gi|300890470|gb|EFK85615.1| ribosomal protein S6 [Thermoanaerobacter sp. X561]
gi|307582590|gb|ADN55989.1| ribosomal protein S6 [Thermoanaerobacter sp. X513]
gi|319930137|gb|ADV80822.1| ribosomal protein S6 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 95
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYLIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSDSKVSQELERVYKITDGVLRYLIIRTD 94
>gi|326391892|ref|ZP_08213402.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
gi|325992054|gb|EGD50536.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
Length = 95
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSNSKVSQELERVYKITDGVLRYLIIRTD 94
>gi|282898434|ref|ZP_06306424.1| Ribosomal protein S6 [Raphidiopsis brookii D9]
gi|281196600|gb|EFA71506.1| Ribosomal protein S6 [Raphidiopsis brookii D9]
Length = 108
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE ++LR D+ Q+ I +YQ+L+ E G E V G R +AY I ++R YV
Sbjct: 4 VYETTYILRSDLGDDQVDQAIVKYQNLLNEQGAENLEVQNRGKRRLAYEINRHRDGVYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +P +AI +R MR++E+V+R LT+
Sbjct: 64 FNYTAPASAIAVFERSMRLNEDVIRYLTV 92
>gi|261867096|ref|YP_003255018.1| 30S ribosomal protein S6 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293390735|ref|ZP_06635069.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|261412428|gb|ACX81799.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951269|gb|EFE01388.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 125
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E+++ R ++ VLRSL +
Sbjct: 60 VLMNVEAPQQVIDELEKTFRYNDAVLRSLVI 90
>gi|320353928|ref|YP_004195267.1| ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
gi|320122430|gb|ADW17976.1| ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
Length = 141
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+LR ++ Q + I + ++I + G + ++ G++ +AY I K + YY
Sbjct: 1 MRHYETTFILRPNLGEDQFTEIIDRTTAIINGDEGSIICLDRWGIKRLAYEINKEVQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V++N A+P + E++R RID+ VLR LT+
Sbjct: 61 VYLNYAAPGKTVDEIERIFRIDDRVLRYLTV 91
>gi|293393198|ref|ZP_06637513.1| 30S ribosomal protein S6 [Serratia odorifera DSM 4582]
gi|291424344|gb|EFE97558.1| 30S ribosomal protein S6 [Serratia odorifera DSM 4582]
Length = 132
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|88810598|ref|ZP_01125855.1| Ribosomal protein S6 [Nitrococcus mobilis Nb-231]
gi|88792228|gb|EAR23338.1| Ribosomal protein S6 [Nitrococcus mobilis Nb-231]
Length = 141
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y+SLI+ NGG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSDQVSAMIERYRSLIEGNGGQIHRLEDWGRRQLAYPIKKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-----LVDSHEQSPTLTIQRHDRDDRNDR 115
+ MN+ P + E+ R ++ V+R + L + D + + +R R +R D+
Sbjct: 60 ILMNVECRPENMEELVSMFRFNDAVIRHMVLSRQEAITDPSPLAKSQDEERGARGERLDK 119
Query: 116 FPRDRNVDRKQHVSEEK 132
R DR + SE++
Sbjct: 120 QGRTDKPDRSETESEQE 136
>gi|307265459|ref|ZP_07547015.1| ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919573|gb|EFN49791.1| ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 95
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKLEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSNSKVSQELERVYKITDGVLRYLIIRTD 94
>gi|162447063|ref|YP_001620195.1| 30S ribosomal protein S6 [Acholeplasma laidlawii PG-8A]
gi|189045451|sp|A9NEN9|RS6_ACHLI RecName: Full=30S ribosomal protein S6
gi|161985170|gb|ABX80819.1| small subunit ribosomal protein S6 [Acholeplasma laidlawii PG-8A]
Length = 95
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ + +++K + ++I NGG V + E+G++ +AY I K+RK YY
Sbjct: 1 MRKYELMYIANPQLDPEKLKGLVANLSNVITSNGGSVLSLKEIGLKDLAYEINKHRKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V+M + + P AI E KR + I E+V+R++
Sbjct: 61 VWMLVEASPEAIAEYKRVVNITESVIRNI 89
>gi|322433962|ref|YP_004216174.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX9]
gi|321161689|gb|ADW67394.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX9]
Length = 162
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 59/97 (60%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D+ + + +Q I + GEV+ + ++G R +AY +RK +YV
Sbjct: 3 RTYEIMFIVRPDVEEADLDKLVEGFQKNITDGNGEVKSIEKMGRRRLAYTVRKFNDGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
MNIA+ I E++R++R+ E V++ +T+ +D E+
Sbjct: 63 LMNIAAEGQLITEIERRLRVSEPVIKFITVRMDEEEK 99
>gi|153209207|ref|ZP_01947273.1| ribosomal protein S6 [Coxiella burnetii 'MSU Goat Q177']
gi|212218344|ref|YP_002305131.1| 30S ribosomal protein S6 [Coxiella burnetii CbuK_Q154]
gi|226703445|sp|B6J6T7|RS6_COXB1 RecName: Full=30S ribosomal protein S6
gi|120575462|gb|EAX32086.1| ribosomal protein S6 [Coxiella burnetii 'MSU Goat Q177']
gi|212012606|gb|ACJ19986.1| SSU ribosomal protein S6P [Coxiella burnetii CbuK_Q154]
Length = 127
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D SSQ + + +YQS+I+E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPDQSSQ-VPAMVERYQSMIKEKGGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI S I E++ R ++ V+RSL L D +L +Q
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITQSSLIMQ 104
>gi|311746135|ref|ZP_07719920.1| ribosomal protein S6 [Algoriphagus sp. PR1]
gi|126576356|gb|EAZ80634.1| ribosomal protein S6 [Algoriphagus sp. PR1]
Length = 123
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S Q+KDT+ ++ +L++E G +V V G++ +AY I K +YV +
Sbjct: 6 YETVFILTPVLSDVQMKDTVDKFVNLLKEEGADVINVENWGLKKMAYTIDKKTTGFYVLV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P I + + + R DE V+R LT +++ H
Sbjct: 66 EFKADPTVISKFELEFRRDEKVMRFLTTVLEKH 98
>gi|332995433|gb|AEF05488.1| 30S ribosomal protein S6 [Alteromonas sp. SN2]
Length = 132
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++++N G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQNDGQIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N + A+ E++ R ++ +LR++ + + P+ + R+ R+D PR
Sbjct: 60 VLINAEATAEAVDELENAFRYNDVILRNMVMRTKNAVTEPSPMTKEERRERRDDSAPRTE 119
Query: 121 NVDRKQHVSEE 131
+R+ +E+
Sbjct: 120 RAERRPESTED 130
>gi|91775679|ref|YP_545435.1| SSU ribosomal protein S6P [Methylobacillus flagellatus KT]
gi|123380513|sp|Q1H1P3|RS6_METFK RecName: Full=30S ribosomal protein S6
gi|91709666|gb|ABE49594.1| SSU ribosomal protein S6P [Methylobacillus flagellatus KT]
Length = 131
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRTLVTSNGGTIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI ++E++ + ++ VLR LTL D +P+
Sbjct: 60 VLMNIEVSQEVLNELEHAFKFNDAVLRHLTLNTDEAVTAPS 100
>gi|282898577|ref|ZP_06306565.1| Ribosomal protein S6 [Cylindrospermopsis raciborskii CS-505]
gi|281196445|gb|EFA71354.1| Ribosomal protein S6 [Cylindrospermopsis raciborskii CS-505]
Length = 108
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE ++LR D+ Q+ I +YQ+L+ E G E + G R +AY I ++R YV
Sbjct: 4 VYETTYILRPDLGDDQVDQAIVKYQNLLNEQGAENLEIQNRGKRRLAYEINRHRDGVYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
N +P AI +R MR++E+V+R LT+ + +P
Sbjct: 64 FNYTAPAGAIAVFERSMRLNEDVIRYLTVKQEVKTTAP 101
>gi|165918507|ref|ZP_02218593.1| ribosomal protein S6 [Coxiella burnetii RSA 334]
gi|165917753|gb|EDR36357.1| ribosomal protein S6 [Coxiella burnetii RSA 334]
Length = 127
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D SSQ + + +YQS+I+E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPDQSSQ-VPAMVERYQSMIKEKGGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI S I E++ R ++ V+RSL L D +L +Q
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQ 104
>gi|317493583|ref|ZP_07952004.1| ribosomal protein S6 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918526|gb|EFV39864.1| ribosomal protein S6 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 132
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|119474661|ref|ZP_01615014.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2143]
gi|119450864|gb|EAW32097.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2143]
Length = 145
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y I++NGG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVPGMVERYTQAIEKNGGKIHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
MN+ + AI E+ R ++ VLR+L + +D +SP + ++ R+ R R R
Sbjct: 60 TLMNVEADQEAIDELTTNFRYNDAVLRNLVIKMDESVTAESPIMKAEKESRERRASRPER 119
>gi|73667309|ref|YP_303325.1| 30S ribosomal protein S6 [Ehrlichia canis str. Jake]
gi|91207915|sp|Q3YRC8|RS6_EHRCJ RecName: Full=30S ribosomal protein S6
gi|72394450|gb|AAZ68727.1| SSU ribosomal protein S6P [Ehrlichia canis str. Jake]
Length = 109
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYTIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ I + P+++ E KRK+R++E+VLR L L D + +L IQ +
Sbjct: 61 CMIYIKATPSSMDEFKRKVRLNEDVLRFLCLKKDKLPKGDSLMIQAN 107
>gi|332184105|gb|AEE26359.1| SSU ribosomal protein S6p [Francisella cf. novicida 3523]
Length = 111
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+S+I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEVVLMIHPD-QSDQLDAMLGKYRSIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|254422309|ref|ZP_05036027.1| ribosomal protein S6 [Synechococcus sp. PCC 7335]
gi|196189798|gb|EDX84762.1| ribosomal protein S6 [Synechococcus sp. PCC 7335]
Length = 112
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR D+ + + D I +YQ+L+ E G E G R +AY I ++R+ Y+ MN
Sbjct: 1 MYILRPDLGDEAVDDAISRYQTLLSEGGAEDIETQHRGKRRLAYEINRHREGIYIQMNYE 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+P + I M+R MR+ E+V+R LT++ +
Sbjct: 61 APGSVIAPMERAMRLSEDVIRYLTIVFE 88
>gi|282877914|ref|ZP_06286723.1| ribosomal protein S6 [Prevotella buccalis ATCC 35310]
gi|281299915|gb|EFA92275.1| ribosomal protein S6 [Prevotella buccalis ATCC 35310]
Length = 114
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ GM+ +AY+I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGMKKLAYQIQKKNSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P + ++ R DE V+R +T+ +D +
Sbjct: 61 CLFEFKGEPTLVQTLETGFRRDEKVIRYMTVKLDKY 96
>gi|239995321|ref|ZP_04715845.1| 30S ribosomal protein S6 [Alteromonas macleodii ATCC 27126]
Length = 133
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++++++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQDGGQIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-RDDRNDRFPRD 119
V +N + A+ E++ R ++ +LR++ + + P+ ++ R+ R+D PR
Sbjct: 60 VLINAEASAEAVDELENAFRFNDVILRNMVMRTKTAVTEPSPMMKEEPRRERRDDSAPRQ 119
Query: 120 RNVDRKQHVSEE 131
++K +E+
Sbjct: 120 DRAEKKTETTED 131
>gi|317130991|ref|YP_004097273.1| ribosomal protein S6 [Bacillus cellulosilyticus DSM 2522]
gi|315475939|gb|ADU32542.1| ribosomal protein S6 [Bacillus cellulosilyticus DSM 2522]
Length = 96
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ K+ + ++ ++ +NG EV V E G R +AY I ++ +Y
Sbjct: 1 MRKYEIMYIVRPNLEEAATKEVVERFNKVLTDNGAEVENVEEKGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ +P AI E R ++I++NVLR L +
Sbjct: 61 VLLNVNAPTVAIDEFNRLIKINDNVLRHLVV 91
>gi|218778774|ref|YP_002430092.1| 30S ribosomal protein S6 [Desulfatibacillum alkenivorans AK-01]
gi|226703451|sp|B8FI57|RS6_DESAA RecName: Full=30S ribosomal protein S6
gi|218760158|gb|ACL02624.1| ribosomal protein S6 [Desulfatibacillum alkenivorans AK-01]
Length = 185
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ D+ + Q LI E+ G + +E G R +AY ++K ++ YY
Sbjct: 1 MRRYETIFISDPDLPEDNRATLFEKMQGLIAEHDGYIAFFDEWGARKLAYEVKKKKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M+ + + I EM+R MRID+ +L+ LT+
Sbjct: 61 VLMDFCAEGSLIAEMERIMRIDDRILKFLTI 91
>gi|253996554|ref|YP_003048618.1| 30S ribosomal protein S6 [Methylotenera mobilis JLW8]
gi|253983233|gb|ACT48091.1| ribosomal protein S6 [Methylotenera mobilis JLW8]
Length = 127
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++LI NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYRALITSNGGAIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR LT+ + +P+
Sbjct: 60 VLMNIECNQTVLEELEHGFKFNDAVLRHLTMATKTAVTAPS 100
>gi|282860310|ref|ZP_06269379.1| ribosomal protein S6 [Prevotella bivia JCVIHMP010]
gi|282586907|gb|EFB92143.1| ribosomal protein S6 [Prevotella bivia JCVIHMP010]
Length = 114
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 58/99 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKALLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|325291434|ref|YP_004267615.1| SSU ribosomal protein S6P [Syntrophobotulus glycolicus DSM 8271]
gi|324966835|gb|ADY57614.1| SSU ribosomal protein S6P [Syntrophobotulus glycolicus DSM 8271]
Length = 94
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R D+ +Q K + ++ ++ NGG V E G R +AY ++K + YY
Sbjct: 1 MKAYEVLYIIRPDLDEEQTKAQVTRFADIVNANGGSELKVEEWGKRRLAYEVKKFNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V MN + E++R M+I + +R LT
Sbjct: 61 VLMNFNGEANTVQELERVMKISDTAIRFLT 90
>gi|186685611|ref|YP_001868807.1| 30S ribosomal protein S6 [Nostoc punctiforme PCC 73102]
gi|226695106|sp|B2J6T8|RS6_NOSP7 RecName: Full=30S ribosomal protein S6
gi|186468063|gb|ACC83864.1| ribosomal protein S6 [Nostoc punctiforme PCC 73102]
Length = 116
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ +Q + I +YQ+L+++ G E + G R +AY I+K+R Y+ +
Sbjct: 5 YETMYILRPDLGDEQAEQAITKYQNLLRDQGAEDIQIQNRGKRRLAYEIKKHRDGIYIQL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +P AI +R MR+ E V+R LT+
Sbjct: 65 NYTAPATAIAPFERAMRLSEEVIRYLTI 92
>gi|81298823|ref|YP_399031.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 7942]
gi|123557696|sp|Q31SC5|RS6_SYNE7 RecName: Full=30S ribosomal protein S6
gi|81167704|gb|ABB56044.1| SSU ribosomal protein S6P [Synechococcus elongatus PCC 7942]
Length = 107
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ I +YQ+L+ E G EV+ G R +AY I K R+ YV +
Sbjct: 6 YETMYILRADLTEEQVEQAIAKYQTLLTEAGAEVQDTQHRGKRRLAYLINKQREGIYVQI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + I ++R +R+ E VLR LT+
Sbjct: 66 NYTGDGSQIAPLERALRLSEEVLRFLTV 93
>gi|16272491|ref|NP_438705.1| 30S ribosomal protein S6 [Haemophilus influenzae Rd KW20]
gi|68249144|ref|YP_248256.1| 30S ribosomal protein S6 [Haemophilus influenzae 86-028NP]
gi|145628928|ref|ZP_01784728.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.1-21]
gi|145630272|ref|ZP_01786053.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|145633501|ref|ZP_01789230.1| 30S ribosomal protein S6 [Haemophilus influenzae 3655]
gi|145635372|ref|ZP_01791074.1| 30S ribosomal protein S6 [Haemophilus influenzae PittAA]
gi|145637412|ref|ZP_01793071.1| 30S ribosomal protein S6 [Haemophilus influenzae PittHH]
gi|145638543|ref|ZP_01794152.1| 30S ribosomal protein S6 [Haemophilus influenzae PittII]
gi|145640520|ref|ZP_01796104.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|148827738|ref|YP_001292491.1| 30S ribosomal protein S6 [Haemophilus influenzae PittGG]
gi|229844294|ref|ZP_04464434.1| 30S ribosomal protein S6 [Haemophilus influenzae 6P18H1]
gi|229846630|ref|ZP_04466738.1| 30S ribosomal protein S6 [Haemophilus influenzae 7P49H1]
gi|260580994|ref|ZP_05848817.1| ribosomal protein S6 [Haemophilus influenzae RdAW]
gi|260582749|ref|ZP_05850536.1| ribosomal protein S6 [Haemophilus influenzae NT127]
gi|319775532|ref|YP_004138020.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3047]
gi|319897936|ref|YP_004136133.1| 30S ribosomal subunit protein s6 [Haemophilus influenzae F3031]
gi|325579202|ref|ZP_08149158.1| 30S ribosomal protein S6 [Haemophilus parainfluenzae ATCC 33392]
gi|329122425|ref|ZP_08251012.1| 30S ribosomal protein S6 [Haemophilus aegyptius ATCC 11116]
gi|1173270|sp|P44375|RS6_HAEIN RecName: Full=30S ribosomal protein S6
gi|81336449|sp|Q4QN01|RS6_HAEI8 RecName: Full=30S ribosomal protein S6
gi|166226970|sp|A5UH52|RS6_HAEIG RecName: Full=30S ribosomal protein S6
gi|1573532|gb|AAC22205.1| ribosomal protein S6 (rpS6) [Haemophilus influenzae Rd KW20]
gi|68057343|gb|AAX87596.1| 30S ribosomal protein S6 [Haemophilus influenzae 86-028NP]
gi|144979398|gb|EDJ89084.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.1-21]
gi|144984007|gb|EDJ91444.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|144985870|gb|EDJ92478.1| 30S ribosomal protein S6 [Haemophilus influenzae 3655]
gi|145267378|gb|EDK07380.1| 30S ribosomal protein S6 [Haemophilus influenzae PittAA]
gi|145269358|gb|EDK09302.1| 30S ribosomal protein S6 [Haemophilus influenzae PittHH]
gi|145272138|gb|EDK12046.1| 30S ribosomal protein S6 [Haemophilus influenzae PittII]
gi|145275106|gb|EDK14968.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.4-21]
gi|148718980|gb|ABR00108.1| 30S ribosomal protein S6 [Haemophilus influenzae PittGG]
gi|229810723|gb|EEP46441.1| 30S ribosomal protein S6 [Haemophilus influenzae 7P49H1]
gi|229812543|gb|EEP48232.1| 30S ribosomal protein S6 [Haemophilus influenzae 6P18H1]
gi|260092353|gb|EEW76293.1| ribosomal protein S6 [Haemophilus influenzae RdAW]
gi|260094199|gb|EEW78100.1| ribosomal protein S6 [Haemophilus influenzae NT127]
gi|301155577|emb|CBW15045.1| 30S ribosomal subunit protein S6 [Haemophilus parainfluenzae
T3T1]
gi|301169262|emb|CBW28859.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae 10810]
gi|309750047|gb|ADO80031.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae R2866]
gi|309972302|gb|ADO95503.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae R2846]
gi|317433442|emb|CBY81825.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3031]
gi|317450123|emb|CBY86337.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3047]
gi|325159437|gb|EGC71571.1| 30S ribosomal protein S6 [Haemophilus parainfluenzae ATCC 33392]
gi|327473707|gb|EGF19126.1| 30S ribosomal protein S6 [Haemophilus aegyptius ATCC 11116]
Length = 125
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLRSL +
Sbjct: 60 VLMNVEAPQQVIDELETTFRYNDAVLRSLVI 90
>gi|68171813|ref|ZP_00545151.1| Ribosomal protein S6 [Ehrlichia chaffeensis str. Sapulpa]
gi|88658444|ref|YP_507129.1| 30S ribosomal protein S6 [Ehrlichia chaffeensis str. Arkansas]
gi|123493682|sp|Q2GHF4|RS6_EHRCR RecName: Full=30S ribosomal protein S6
gi|67998762|gb|EAM85476.1| Ribosomal protein S6 [Ehrlichia chaffeensis str. Sapulpa]
gi|88599901|gb|ABD45370.1| ribosomal protein S6 [Ehrlichia chaffeensis str. Arkansas]
Length = 109
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYTIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ I + P+++ E KRK+R++E++LR L L D + +L IQ
Sbjct: 61 CMIYIKATPSSMDEFKRKVRLNEDILRFLCLKKDKLPKGDSLMIQ 105
>gi|238897796|ref|YP_002923475.1| 30S ribosomal subunit protein S6 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259495337|sp|C4K434|RS6_HAMD5 RecName: Full=30S ribosomal protein S6
gi|229465553|gb|ACQ67327.1| 30S ribosomal subunit protein S6 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 143
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ I +Y ++I ++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSDQVPGMIQRYSTVITQSGGQIHRIEDWGRRQLAYAINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N+ +P AI+E++ R ++ V+R+L
Sbjct: 60 VLLNVEAPQNAINELETNFRFNDAVMRNL 88
>gi|296136560|ref|YP_003643802.1| ribosomal protein S6 [Thiomonas intermedia K12]
gi|294340688|emb|CAZ89080.1| 30S ribosomal protein S6 [Thiomonas sp. 3As]
gi|295796682|gb|ADG31472.1| ribosomal protein S6 [Thiomonas intermedia K12]
Length = 120
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V + D S+Q+ I +Y+S + G++ V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLIFHPD-QSEQVPAMIERYKSAVTAKAGQIHRVEDWGRRQLAYPIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
MNI + E++ + ++ VLRSL + D E +P++ +++ +RD+
Sbjct: 60 ACMNIECDLETLRELEHSFKFNDAVLRSLVIKTDKAETAPSIMMKQVERDE 110
>gi|260773679|ref|ZP_05882595.1| SSU ribosomal protein S6p [Vibrio metschnikovii CIP 69.14]
gi|260612818|gb|EEX38021.1| SSU ribosomal protein S6p [Vibrio metschnikovii CIP 69.14]
Length = 122
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTVHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
V MN+ + A I E++ R ++ VLR++ + + P++ ++ RD+R+ R
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKA--RDERSKR 112
>gi|332678242|gb|AEE87371.1| SSU ribosomal protein S6p [Francisella cf. novicida Fx1]
Length = 111
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG+V + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKVHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|293604273|ref|ZP_06686680.1| 30S ribosomal protein S6 [Achromobacter piechaudii ATCC 43553]
gi|292817150|gb|EFF76224.1| 30S ribosomal protein S6 [Achromobacter piechaudii ATCC 43553]
Length = 124
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI A + E++ R ++ VLR L + + +P++ ++ +R++
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTTPSIMMKSVEREE 110
>gi|251793278|ref|YP_003008006.1| 30S ribosomal protein S6 [Aggregatibacter aphrophilus NJ8700]
gi|315633587|ref|ZP_07888877.1| 30S ribosomal protein S6 [Aggregatibacter segnis ATCC 33393]
gi|247534673|gb|ACS97919.1| ribosomal protein S6 [Aggregatibacter aphrophilus NJ8700]
gi|315477629|gb|EFU68371.1| 30S ribosomal protein S6 [Aggregatibacter segnis ATCC 33393]
Length = 125
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLRSL +
Sbjct: 60 VLMNVEAPQQVIDELETTFRYNDAVLRSLVI 90
>gi|325857464|ref|ZP_08172519.1| ribosomal protein S6 [Prevotella denticola CRIS 18C-A]
gi|327314150|ref|YP_004329587.1| 30S ribosomal protein S6 [Prevotella denticola F0289]
gi|325483174|gb|EGC86154.1| ribosomal protein S6 [Prevotella denticola CRIS 18C-A]
gi|326946235|gb|AEA22120.1| ribosomal protein S6 [Prevotella denticola F0289]
Length = 114
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRKLLADNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVIYTLETAFRRDEKVIRYITVKQDKYSAA 99
>gi|157736502|ref|YP_001489185.1| 30S ribosomal protein S6 [Arcobacter butzleri RM4018]
gi|157698356|gb|ABV66516.1| 30S ribosomal protein S6 [Arcobacter butzleri RM4018]
Length = 118
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 62/103 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F+L+ ++ ++ I ++LI++NGGE+ + +G+R +AY I K ++ YY
Sbjct: 4 IKHYETMFILKPTLTEEETVAQIDGIKALIEKNGGEISSTDNVGIRELAYEIEKCKRGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ P+ I E++R R +EN++R + + D+ ++ + T
Sbjct: 64 YVIYFKGNPSGIAEIERNYRNNENLIRFIFIKYDTKKEIASWT 106
>gi|322831169|ref|YP_004211196.1| ribosomal protein S6 [Rahnella sp. Y9602]
gi|321166370|gb|ADW72069.1| ribosomal protein S6 [Rahnella sp. Y9602]
Length = 130
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V +N+ +P AI E++ R ++ V+RS+ + E SP + + RD R D
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRDRRED 115
>gi|303257675|ref|ZP_07343687.1| ribosomal protein S6 [Burkholderiales bacterium 1_1_47]
gi|331000771|ref|ZP_08324420.1| ribosomal protein S6 [Parasutterella excrementihominis YIT 11859]
gi|302859645|gb|EFL82724.1| ribosomal protein S6 [Burkholderiales bacterium 1_1_47]
gi|329570503|gb|EGG52228.1| ribosomal protein S6 [Parasutterella excrementihominis YIT 11859]
Length = 138
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ I +Y++ ++ +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEICFIVHPD-QSEQVPAMIERYKAAVESHGGKIHRLEDWGRRQLAYPIEKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI P + E++ R ++ VLR LT+ + E P+
Sbjct: 60 VLMNIECGPEVLEELENNFRYNDAVLRHLTVKMKKAETEPS 100
>gi|315587137|gb|ADU41518.1| 30S ribosomal protein S6 [Helicobacter pylori 35A]
gi|332674049|gb|AEE70866.1| 30S ribosomal protein S6 [Helicobacter pylori 83]
Length = 158
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 17 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 76
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 77 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 136
Query: 108 DRDDRN 113
++ +
Sbjct: 137 EKTEHT 142
>gi|297380426|gb|ADI35313.1| ribosomal protein S6 [Helicobacter pylori v225d]
Length = 137
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVGAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|108563614|ref|YP_627930.1| 30S ribosomal protein S6 [Helicobacter pylori HPAG1]
gi|123073733|sp|Q1CS16|RS6_HELPH RecName: Full=30S ribosomal protein S6
gi|107837387|gb|ABF85256.1| ribosomal protein S6 [Helicobacter pylori HPAG1]
gi|317182495|dbj|BAJ60279.1| 30S ribosomal protein S6 [Helicobacter pylori F57]
Length = 142
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|304312010|ref|YP_003811608.1| 30S ribosomal protein S6 [gamma proteobacterium HdN1]
gi|301797743|emb|CBL45965.1| 30S ribosomal protein S6 [gamma proteobacterium HdN1]
Length = 141
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+ +I E GG++ + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMVERYKGVITEGGGKIHRFEDWGRRQLAYPIDKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ MN+ A+ E+ R ++ VLR++ + D S + ++ D+ +R R P
Sbjct: 60 ILMNVECSQEALDELGTNFRYNDAVLRNIVIRKDEAVTSESPMLKAGDKPERERRSP 116
>gi|208435141|ref|YP_002266807.1| ribosomal protein S6 [Helicobacter pylori G27]
gi|226703475|sp|B5Z8P2|RS6_HELPG RecName: Full=30S ribosomal protein S6
gi|208433070|gb|ACI27941.1| ribosomal protein S6 [Helicobacter pylori G27]
Length = 142
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDD 111
++ +
Sbjct: 121 EKTE 124
>gi|167629779|ref|YP_001680278.1| 30S ribosomal protein s6 [Heliobacterium modesticaldum Ice1]
gi|226703473|sp|B0TE72|RS6_HELMI RecName: Full=30S ribosomal protein S6
gi|167592519|gb|ABZ84267.1| 30S ribosomal protein s6 [Heliobacterium modesticaldum Ice1]
Length = 96
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+R ++ + ++ I ++ +L+ + GGEV V++ G R + Y ++K ++A+Y
Sbjct: 1 MREYEAVVLVRPNLEEEALQGVIDKFVNLVPQQGGEVVKVDKWGKRRLQYEVKKFKEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N PA E++R M+I ++++R L +
Sbjct: 61 FLLNFKGEPAVAQELERVMKISDDIIRFLVV 91
>gi|240013909|ref|ZP_04720822.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae DGI18]
gi|240113162|ref|ZP_04727652.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|240121478|ref|ZP_04734440.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID24-1]
gi|240128467|ref|ZP_04741128.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|268599241|ref|ZP_06133408.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|268686858|ref|ZP_06153720.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|293398875|ref|ZP_06643040.1| small subunit ribosomal protein S6 [Neisseria gonorrhoeae F62]
gi|268583372|gb|EEZ48048.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|268627142|gb|EEZ59542.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|291610289|gb|EFF39399.1| small subunit ribosomal protein S6 [Neisseria gonorrhoeae F62]
Length = 122
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|298368601|ref|ZP_06979919.1| ribosomal protein S6 [Neisseria sp. oral taxon 014 str. F0314]
gi|298282604|gb|EFI24091.1| ribosomal protein S6 [Neisseria sp. oral taxon 014 str. F0314]
Length = 125
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|322379200|ref|ZP_08053591.1| 30S ribosomal protein S6 [Helicobacter suis HS1]
gi|321148340|gb|EFX42849.1| 30S ribosomal protein S6 [Helicobacter suis HS1]
Length = 157
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 59/95 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F+L+ + + IKD + YQ +I ++GGEV ++G R +AY I+K+++ YY
Sbjct: 23 LKHYETMFILKPTLVEEDIKDKLAFYQEVITKSGGEVVNTLDMGHRNLAYEIQKHKRGYY 82
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + E++R RI+E++LR + L +S
Sbjct: 83 FVIYFTAHADVVLELERLYRINEDILRFMILKYES 117
>gi|217032305|ref|ZP_03437801.1| hypothetical protein HPB128_132g3 [Helicobacter pylori B128]
gi|217033567|ref|ZP_03438995.1| hypothetical protein HP9810_899g3 [Helicobacter pylori 98-10]
gi|298735730|ref|YP_003728255.1| 30S ribosomal protein S6 [Helicobacter pylori B8]
gi|308183356|ref|YP_003927483.1| 30S ribosomal protein S6 [Helicobacter pylori PeCan4]
gi|216943913|gb|EEC23347.1| hypothetical protein HP9810_899g3 [Helicobacter pylori 98-10]
gi|216945971|gb|EEC24585.1| hypothetical protein HPB128_132g3 [Helicobacter pylori B128]
gi|261838569|gb|ACX98335.1| ribosomal protein S6 [Helicobacter pylori 51]
gi|298354919|emb|CBI65791.1| small subunit ribosomal protein S6 [Helicobacter pylori B8]
gi|308065541|gb|ADO07433.1| 30S ribosomal protein S6 [Helicobacter pylori PeCan4]
gi|317009930|gb|ADU80510.1| 30S ribosomal protein S6 [Helicobacter pylori India7]
gi|317178460|dbj|BAJ56248.1| 30S ribosomal protein S6 [Helicobacter pylori F30]
gi|317180972|dbj|BAJ58758.1| 30S ribosomal protein S6 [Helicobacter pylori F32]
Length = 142
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|317011446|gb|ADU85193.1| 30S ribosomal protein S6 [Helicobacter pylori SouthAfrica7]
Length = 142
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKTKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQH 127
++ + + ++ H
Sbjct: 121 EKTEHTHSHHTEEAGSKESH 140
>gi|56708147|ref|YP_170043.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89256363|ref|YP_513725.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
LVS]
gi|110670618|ref|YP_667175.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC198]
gi|118497543|ref|YP_898593.1| 30S ribosomal protein S6 [Francisella tularensis subsp. novicida
U112]
gi|134301960|ref|YP_001121929.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|167010708|ref|ZP_02275639.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC200]
gi|187931623|ref|YP_001891607.1| 30S ribosomal protein S6 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457243|ref|ZP_03665716.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254367699|ref|ZP_04983720.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
257]
gi|254369337|ref|ZP_04985349.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC022]
gi|254370631|ref|ZP_04986636.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC033]
gi|254874950|ref|ZP_05247660.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|290954056|ref|ZP_06558677.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
URFT1]
gi|295312549|ref|ZP_06803309.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
URFT1]
gi|61215373|sp|Q5NFZ9|RS6_FRATT RecName: Full=30S ribosomal protein S6
gi|122500738|sp|Q2A3H7|RS6_FRATH RecName: Full=30S ribosomal protein S6
gi|122970928|sp|Q14HF1|RS6_FRAT1 RecName: Full=30S ribosomal protein S6
gi|166226831|sp|A0Q6H4|RS6_FRATN RecName: Full=30S ribosomal protein S6
gi|166226967|sp|A4IY07|RS6_FRATW RecName: Full=30S ribosomal protein S6
gi|226703470|sp|B2SGH0|RS6_FRATM RecName: Full=30S ribosomal protein S6
gi|56604639|emb|CAG45695.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89144194|emb|CAJ79463.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
LVS]
gi|110320951|emb|CAL09078.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC198]
gi|118423449|gb|ABK89839.1| 30S ribosomal protein S6 [Francisella novicida U112]
gi|134049737|gb|ABO46808.1| ribosomal protein S6 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134253510|gb|EBA52604.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
257]
gi|151568874|gb|EDN34528.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC033]
gi|157122287|gb|EDO66427.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC022]
gi|187712532|gb|ACD30829.1| 30S ribosomal protein S6 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840949|gb|EET19385.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159353|gb|ADA78744.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
NE061598]
Length = 111
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEVVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|15645860|ref|NP_208038.1| 30S ribosomal protein S6 [Helicobacter pylori 26695]
gi|2500411|sp|P56013|RS6_HELPY RecName: Full=30S ribosomal protein S6
gi|2314412|gb|AAD08292.1| ribosomal protein S6 (rps6) [Helicobacter pylori 26695]
Length = 142
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|169656606|ref|YP_001428513.2| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|164551674|gb|ABU61557.2| ribosomal protein S6 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 120
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 10 MKHYEVVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 69 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 118
>gi|304413762|ref|ZP_07395206.1| 30S ribosomal subunit protein S6 [Candidatus Regiella insecticola
LSR1]
gi|304283853|gb|EFL92247.1| 30S ribosomal subunit protein S6 [Candidatus Regiella insecticola
LSR1]
Length = 133
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ D I +Y +I G++ + + G R +AY I K KA+Y
Sbjct: 6 MRHYEIVFMVHPD-QSEQVPDMIERYSQIITNANGQIHRLEDWGRRQLAYPINKLHKAHY 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V N+ + AI E+++ R E VLRSL + E SP + +D+R DR
Sbjct: 65 VLFNVEAAQEAIDELEKSFRFSEAVLRSLVMRSKGAVTEASPMVKA----KDERRDR 117
>gi|225075140|ref|ZP_03718339.1| hypothetical protein NEIFLAOT_00140 [Neisseria flavescens
NRL30031/H210]
gi|224953624|gb|EEG34833.1| hypothetical protein NEIFLAOT_00140 [Neisseria flavescens
NRL30031/H210]
Length = 123
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|304396941|ref|ZP_07378821.1| ribosomal protein S6 [Pantoea sp. aB]
gi|308188255|ref|YP_003932386.1| 30S ribosomal protein S6 [Pantoea vagans C9-1]
gi|304355737|gb|EFM20104.1| ribosomal protein S6 [Pantoea sp. aB]
gi|308058765|gb|ADO10937.1| 30S ribosomal protein S6 [Pantoea vagans C9-1]
Length = 131
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ +P AI E++ R ++ V+RS+ + V + E SP + + RD R D
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRVKNAVTEASPMVKAKDERRDRRED 115
>gi|254372904|ref|ZP_04988393.1| 30S ribosomal protein S6 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374358|ref|ZP_04989840.1| 30S ribosomal protein S6 [Francisella novicida GA99-3548]
gi|151570631|gb|EDN36285.1| 30S ribosomal protein S6 [Francisella novicida GA99-3549]
gi|151572078|gb|EDN37732.1| 30S ribosomal protein S6 [Francisella novicida GA99-3548]
Length = 111
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|220907101|ref|YP_002482412.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 7425]
gi|254765234|sp|B8HR63|RS6_CYAP4 RecName: Full=30S ribosomal protein S6
gi|219863712|gb|ACL44051.1| ribosomal protein S6 [Cyanothece sp. PCC 7425]
Length = 106
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++++R D+ + + I QYQSL+++ G E G R +AY IRK R+ YV
Sbjct: 3 QLYETMYIIRPDLGEETVDQVINQYQSLLRDQGAEDVQTQHRGKRRLAYEIRKFREGIYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + + ++R MR+ + V+R LT+ D
Sbjct: 63 QMNYKAAGPLVANLQRAMRLSDEVIRYLTICQD 95
>gi|261365212|ref|ZP_05978095.1| ribosomal protein S6 [Neisseria mucosa ATCC 25996]
gi|288566474|gb|EFC88034.1| ribosomal protein S6 [Neisseria mucosa ATCC 25996]
Length = 123
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKAMIAEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + P + E++ R ++ VLR LT+ E SP L
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 [Neisseria flavescens SK114]
gi|319637635|ref|ZP_07992401.1| 30S ribosomal protein S6 [Neisseria mucosa C102]
gi|241319253|gb|EER55731.1| ribosomal protein S6 [Neisseria flavescens SK114]
gi|317400790|gb|EFV81445.1| 30S ribosomal protein S6 [Neisseria mucosa C102]
Length = 123
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|54310419|ref|YP_131439.1| 30S ribosomal protein S6 [Photobacterium profundum SS9]
gi|61216203|sp|Q6LM41|RS6_PHOPR RecName: Full=30S ribosomal protein S6
gi|46914860|emb|CAG21637.1| putative ribosomal protein S6 [Photobacterium profundum SS9]
Length = 147
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLT------IQRHDRDDR 112
V MNI + + + E++ R ++ V+R++ + + E SP + +R DR++R
Sbjct: 60 VLMNIEAEQSVVDELESTFRFNDAVIRNMIMRAKNAVTEPSPMMKAKEERFTKRDDREER 119
Query: 113 NDR 115
+DR
Sbjct: 120 SDR 122
>gi|332527889|ref|ZP_08403926.1| 30S ribosomal protein S6 [Rubrivivax benzoatilyticus JA2]
gi|332112466|gb|EGJ12259.1| 30S ribosomal protein S6 [Rubrivivax benzoatilyticus JA2]
Length = 121
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y++L+ GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKTLVTAGGGKVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + E++ R ++ VLR LT+ + E +P++ ++ +R++
Sbjct: 60 LCLNIECDKPVLEELETGFRFNDAVLRHLTVRKEKAETTPSVMMKAVEREE 110
>gi|296314490|ref|ZP_06864431.1| ribosomal protein S6 [Neisseria polysaccharea ATCC 43768]
gi|296838792|gb|EFH22730.1| ribosomal protein S6 [Neisseria polysaccharea ATCC 43768]
Length = 122
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|121635034|ref|YP_975279.1| 30S ribosomal protein S6 [Neisseria meningitidis FAM18]
gi|161870198|ref|YP_001599368.1| 30S ribosomal protein S6 [Neisseria meningitidis 053442]
gi|218768343|ref|YP_002342855.1| 30S ribosomal protein S6 [Neisseria meningitidis Z2491]
gi|254805122|ref|YP_003083343.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha14]
gi|304387366|ref|ZP_07369558.1| 30S ribosomal protein S6 [Neisseria meningitidis ATCC 13091]
gi|13959509|sp|Q9JU24|RS6_NEIMA RecName: Full=30S ribosomal protein S6
gi|166227354|sp|A1KUF0|RS6_NEIMF RecName: Full=30S ribosomal protein S6
gi|189045476|sp|A9LZQ3|RS6_NEIM0 RecName: Full=30S ribosomal protein S6
gi|120866740|emb|CAM10493.1| 30S ribosomal protein S6 [Neisseria meningitidis FAM18]
gi|121052351|emb|CAM08683.1| 30S ribosomal protein S6 [Neisseria meningitidis Z2491]
gi|161595751|gb|ABX73411.1| 30S ribosomal protein S6 [Neisseria meningitidis 053442]
gi|254668664|emb|CBA06348.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha14]
gi|254671746|emb|CBA09568.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha153]
gi|261392397|emb|CAX49939.1| 30S ribosomal protein S6 [Neisseria meningitidis 8013]
gi|304338617|gb|EFM04735.1| 30S ribosomal protein S6 [Neisseria meningitidis ATCC 13091]
gi|308389441|gb|ADO31761.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha710]
gi|316984125|gb|EFV63103.1| ribosomal protein S6 [Neisseria meningitidis H44/76]
gi|319410589|emb|CBY90958.1| 30S ribosomal protein S6 [Neisseria meningitidis WUE 2594]
gi|325128380|gb|EGC51263.1| ribosomal protein S6 [Neisseria meningitidis N1568]
gi|325134437|gb|EGC57082.1| ribosomal protein S6 [Neisseria meningitidis M13399]
gi|325138251|gb|EGC60820.1| ribosomal protein S6 [Neisseria meningitidis ES14902]
gi|325140453|gb|EGC62974.1| ribosomal protein S6 [Neisseria meningitidis CU385]
gi|325205905|gb|ADZ01358.1| ribosomal protein S6 [Neisseria meningitidis M04-240196]
Length = 122
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|323345546|ref|ZP_08085769.1| 30S ribosomal protein S6 [Prevotella oralis ATCC 33269]
gi|323093660|gb|EFZ36238.1| 30S ribosomal protein S6 [Prevotella oralis ATCC 33269]
Length = 114
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ VNE G++ +AY+I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEI--VNEEAWGLKKMAYQIQKKTSG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y P +++++ R DE V+R +T+ +D +
Sbjct: 59 FYCLFEFKGEPTIVNKLETGYRRDEKVIRYITVSLDKY 96
>gi|307822878|ref|ZP_07653109.1| ribosomal protein S6 [Methylobacter tundripaludum SV96]
gi|307736482|gb|EFO07328.1| ribosomal protein S6 [Methylobacter tundripaludum SV96]
Length = 152
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D SSQ + I +Y+S I+ G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPDQSSQ-VPAMIERYKSTIETASGKIHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V MN+ A + E++ R ++ +LRS+TLL
Sbjct: 60 VLMNVECDQATLEELESGFRFNDAILRSMTLL 91
>gi|308062529|gb|ADO04417.1| 30S ribosomal protein S6 [Helicobacter pylori Cuz20]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|145600834|ref|YP_001164910.1| 30S ribosomal protein S6 [Yersinia pestis Pestoides F]
gi|166227404|sp|A4TRM5|RS6_YERPP RecName: Full=30S ribosomal protein S6
gi|145212530|gb|ABP41937.1| SSU ribosomal protein S6P [Yersinia pestis Pestoides F]
Length = 130
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPISKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + +R +R+D F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASP-MVKAKDERRERHD-FAS 117
Query: 119 DRNVDRKQHVSEE 131
+ N D + SEE
Sbjct: 118 EANDDSEAGDSEE 130
>gi|320161642|ref|YP_004174867.1| 30S ribosomal protein S6 [Anaerolinea thermophila UNI-1]
gi|319995496|dbj|BAJ64267.1| 30S ribosomal protein S6 [Anaerolinea thermophila UNI-1]
Length = 94
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ I + Q I GG V + G RT+AY IRK R+ Y
Sbjct: 1 MRNYEVIFIIHPELDETASTALIEKVQGWITGAGGTVEKTDVWGKRTMAYSIRKQREGNY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V+M +A PPA ++E+ +R+ E VLR L
Sbjct: 61 VYMQVAMPPAFVNELSTNLRLTEPVLRYL 89
>gi|325132477|gb|EGC55170.1| ribosomal protein S6 [Neisseria meningitidis M6190]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|313668460|ref|YP_004048744.1| 30S ribosomal protein S6 [Neisseria lactamica ST-640]
gi|309379252|emb|CBX22209.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005922|emb|CBN87379.1| 30S ribosomal protein S6 [Neisseria lactamica 020-06]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|261401265|ref|ZP_05987390.1| ribosomal protein S6 [Neisseria lactamica ATCC 23970]
gi|269208748|gb|EEZ75203.1| ribosomal protein S6 [Neisseria lactamica ATCC 23970]
gi|325136174|gb|EGC58782.1| ribosomal protein S6 [Neisseria meningitidis M0579]
gi|325201967|gb|ADY97421.1| ribosomal protein S6 [Neisseria meningitidis M01-240149]
gi|325208282|gb|ADZ03734.1| ribosomal protein S6 [Neisseria meningitidis NZ-05/33]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|22124559|ref|NP_667982.1| 30S ribosomal protein S6 [Yersinia pestis KIM 10]
gi|45440396|ref|NP_991935.1| 30S ribosomal protein S6 [Yersinia pestis biovar Microtus str.
91001]
gi|51594790|ref|YP_068981.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 32953]
gi|108806087|ref|YP_650003.1| 30S ribosomal protein S6 [Yersinia pestis Antiqua]
gi|108813443|ref|YP_649210.1| 30S ribosomal protein S6 [Yersinia pestis Nepal516]
gi|123440773|ref|YP_001004765.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|153950227|ref|YP_001402593.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 31758]
gi|153997316|ref|ZP_02022416.1| 30S ribosomal protein S6 [Yersinia pestis CA88-4125]
gi|162419609|ref|YP_001605263.1| 30S ribosomal protein S6 [Yersinia pestis Angola]
gi|165928153|ref|ZP_02223985.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937530|ref|ZP_02226093.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. IP275]
gi|166011303|ref|ZP_02232201.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166214044|ref|ZP_02240079.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401345|ref|ZP_02306845.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420582|ref|ZP_02312335.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423107|ref|ZP_02314860.1| ribosomal protein S6 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170025999|ref|YP_001722504.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis YPIII]
gi|186893799|ref|YP_001870911.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis PB1/+]
gi|218930553|ref|YP_002348428.1| 30S ribosomal protein S6 [Yersinia pestis CO92]
gi|229836649|ref|ZP_04456815.1| 30S ribosomal subunit protein S6 [Yersinia pestis Pestoides A]
gi|229839193|ref|ZP_04459352.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899757|ref|ZP_04514898.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903919|ref|ZP_04519032.1| 30S ribosomal subunit protein S6 [Yersinia pestis Nepal516]
gi|270489091|ref|ZP_06206165.1| ribosomal protein S6 [Yersinia pestis KIM D27]
gi|294505336|ref|YP_003569398.1| 30S ribosomal protein S6 [Yersinia pestis Z176003]
gi|332160035|ref|YP_004296612.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|24212313|sp|Q8ZB81|RS6_YERPE RecName: Full=30S ribosomal protein S6
gi|61216169|sp|Q66FA2|RS6_YERPS RecName: Full=30S ribosomal protein S6
gi|123246054|sp|Q1CBW4|RS6_YERPA RecName: Full=30S ribosomal protein S6
gi|123372931|sp|Q1CEH0|RS6_YERPN RecName: Full=30S ribosomal protein S6
gi|166227403|sp|A1JIS8|RS6_YERE8 RecName: Full=30S ribosomal protein S6
gi|167011250|sp|A7FMW5|RS6_YERP3 RecName: Full=30S ribosomal protein S6
gi|226705652|sp|B2K2L3|RS6_YERPB RecName: Full=30S ribosomal protein S6
gi|226705653|sp|A9QYL5|RS6_YERPG RecName: Full=30S ribosomal protein S6
gi|226705654|sp|B1JMM4|RS6_YERPY RecName: Full=30S ribosomal protein S6
gi|21957359|gb|AAM84233.1|AE013667_6 30S ribosomal subunit protein S6 [Yersinia pestis KIM 10]
gi|45435253|gb|AAS60812.1| 30S ribosomal protein S6 [Yersinia pestis biovar Microtus str.
91001]
gi|51588072|emb|CAH19678.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 32953]
gi|108777091|gb|ABG19610.1| SSU ribosomal protein S6P [Yersinia pestis Nepal516]
gi|108778000|gb|ABG12058.1| SSU ribosomal protein S6P [Yersinia pestis Antiqua]
gi|115349164|emb|CAL22127.1| 30S ribosomal protein S6 [Yersinia pestis CO92]
gi|122087734|emb|CAL10519.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|149288953|gb|EDM39033.1| 30S ribosomal protein S6 [Yersinia pestis CA88-4125]
gi|152961722|gb|ABS49183.1| ribosomal protein S6 [Yersinia pseudotuberculosis IP 31758]
gi|162352424|gb|ABX86372.1| ribosomal protein S6 [Yersinia pestis Angola]
gi|165914635|gb|EDR33249.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. IP275]
gi|165919840|gb|EDR37141.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989687|gb|EDR41988.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166204839|gb|EDR49319.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961388|gb|EDR57409.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049370|gb|EDR60778.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057277|gb|EDR67023.1| ribosomal protein S6 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752533|gb|ACA70051.1| ribosomal protein S6 [Yersinia pseudotuberculosis YPIII]
gi|186696825|gb|ACC87454.1| ribosomal protein S6 [Yersinia pseudotuberculosis PB1/+]
gi|229679689|gb|EEO75792.1| 30S ribosomal subunit protein S6 [Yersinia pestis Nepal516]
gi|229687249|gb|EEO79324.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695559|gb|EEO85606.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706333|gb|EEO92341.1| 30S ribosomal subunit protein S6 [Yersinia pestis Pestoides A]
gi|262363400|gb|ACY60121.1| 30S ribosomal protein S6 [Yersinia pestis D106004]
gi|262367223|gb|ACY63780.1| 30S ribosomal protein S6 [Yersinia pestis D182038]
gi|270337595|gb|EFA48372.1| ribosomal protein S6 [Yersinia pestis KIM D27]
gi|294355795|gb|ADE66136.1| 30S ribosomal protein S6 [Yersinia pestis Z176003]
gi|318607405|emb|CBY28903.1| SSU ribosomal protein S6p [Yersinia enterocolitica subsp.
palearctica Y11]
gi|320013743|gb|ADV97314.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|325664265|gb|ADZ40909.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862081|emb|CBX72247.1| 30S ribosomal protein S6 [Yersinia enterocolitica W22703]
Length = 130
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + +R +R+D F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVK-AKDERRERHD-FAS 117
Query: 119 DRNVDRKQHVSEE 131
+ N D + SEE
Sbjct: 118 EANDDSEAGDSEE 130
>gi|261379071|ref|ZP_05983644.1| ribosomal protein S6 [Neisseria cinerea ATCC 14685]
gi|269144450|gb|EEZ70868.1| ribosomal protein S6 [Neisseria cinerea ATCC 14685]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|90414464|ref|ZP_01222440.1| 30S ribosomal protein S6 [Photobacterium profundum 3TCK]
gi|90324469|gb|EAS41028.1| 30S ribosomal protein S6 [Photobacterium profundum 3TCK]
Length = 141
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLT------IQRHDRDDR 112
V MNI + + + E++ R ++ V+R++ + + E SP + +R DR++R
Sbjct: 60 VLMNIEAEQSVVDELETTFRFNDAVIRNMIMRAKNAVTEPSPMMKAKEERFTKRDDREER 119
Query: 113 NDR 115
+DR
Sbjct: 120 SDR 122
>gi|261379684|ref|ZP_05984257.1| ribosomal protein S6 [Neisseria subflava NJ9703]
gi|284797346|gb|EFC52693.1| ribosomal protein S6 [Neisseria subflava NJ9703]
Length = 123
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTI 90
>gi|295402139|ref|ZP_06812098.1| ribosomal protein S6 [Geobacillus thermoglucosidasius C56-YS93]
gi|312112740|ref|YP_003991056.1| ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
gi|294975822|gb|EFG51441.1| ribosomal protein S6 [Geobacillus thermoglucosidasius C56-YS93]
gi|311217841|gb|ADP76445.1| ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
Length = 95
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R YY
Sbjct: 1 MRKYEIMYIIRPNLDDEARQALVDRFNNILKENGAEITNVTDWGKRRLAYEIKKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S P A+ E R RI ++++R + +
Sbjct: 61 MIINVVSEPKAVQEFDRLARISDDIIRHIVV 91
>gi|320539667|ref|ZP_08039331.1| 30S ribosomal subunit protein S6 [Serratia symbiotica str. Tucson]
gi|320030279|gb|EFW12294.1| 30S ribosomal subunit protein S6 [Serratia symbiotica str. Tucson]
Length = 132
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFHFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDVDAGDSEE 132
>gi|210135405|ref|YP_002301844.1| 30S ribosomal protein S6 [Helicobacter pylori P12]
gi|226703474|sp|B6JN86|RS6_HELP2 RecName: Full=30S ribosomal protein S6
gi|210133373|gb|ACJ08364.1| 30S ribosomal protein S6 [Helicobacter pylori P12]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|148825179|ref|YP_001289932.1| 30S ribosomal protein S6 [Haemophilus influenzae PittEE]
gi|166226969|sp|A5U9U8|RS6_HAEIE RecName: Full=30S ribosomal protein S6
gi|148715339|gb|ABQ97549.1| 30S ribosomal protein S6 [Haemophilus influenzae PittEE]
Length = 125
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ P I E++ R ++ VLRSL +
Sbjct: 60 VLMNVEVPQQVIDELETTFRYNDAVLRSLVI 90
>gi|254779789|ref|YP_003057895.1| 30S ribosomal protein S6 [Helicobacter pylori B38]
gi|254001701|emb|CAX29932.1| 30S ribosomal subunit protein S6 [Helicobacter pylori B38]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEIEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|317013032|gb|ADU83640.1| 30S ribosomal protein S6 [Helicobacter pylori Lithuania75]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|308064026|gb|ADO05913.1| 30S ribosomal protein S6 [Helicobacter pylori Sat464]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKANPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|207092387|ref|ZP_03240174.1| 30S ribosomal protein S6 [Helicobacter pylori HPKX_438_AG0C1]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|259907189|ref|YP_002647545.1| 30S ribosomal protein S6 [Erwinia pyrifoliae Ep1/96]
gi|224962811|emb|CAX54269.1| 30S ribosomal protein S6 [Erwinia pyrifoliae Ep1/96]
gi|283476998|emb|CAY72890.1| 30S ribosomal protein S6 [Erwinia pyrifoliae DSM 12163]
Length = 131
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AAI E++ R ++ V+RS+ + V E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQAAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ + D SEE
Sbjct: 119 ETSDDADAGDSEE 131
>gi|188528036|ref|YP_001910723.1| 30S ribosomal protein S6 [Helicobacter pylori Shi470]
gi|226703476|sp|B2UV11|RS6_HELPS RecName: Full=30S ribosomal protein S6
gi|188144276|gb|ACD48693.1| 30S ribosomal protein S6 [Helicobacter pylori Shi470]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKANPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|288926385|ref|ZP_06420307.1| ribosomal protein S6 [Prevotella buccae D17]
gi|315608714|ref|ZP_07883692.1| 30S ribosomal protein S6 [Prevotella buccae ATCC 33574]
gi|288336838|gb|EFC75202.1| ribosomal protein S6 [Prevotella buccae D17]
gi|315249564|gb|EFU29575.1| 30S ribosomal protein S6 [Prevotella buccae ATCC 33574]
Length = 114
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAELVSEETWGLKKLAYNIQKKTSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ I +++ R +E V+R +T+ +D +
Sbjct: 61 CLFEFKAEPSVIEKLETGFRREEKVIRYMTVKLDKY 96
>gi|329896990|ref|ZP_08271783.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC3088]
gi|328921498|gb|EGG28883.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC3088]
Length = 147
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I+++GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTQIIEKDGGKVHRLEDWGRRQLAYTINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ + A+ E+ R ++ V+R+L + +D + S +L ++
Sbjct: 60 VLMNVEASLEAMDELTTIFRYNDAVIRNLVIKMDEADTSESLIMK 104
>gi|319778268|ref|YP_004129181.1| SSU ribosomal protein S6p [Taylorella equigenitalis MCE9]
gi|317108292|gb|ADU91038.1| SSU ribosomal protein S6p [Taylorella equigenitalis MCE9]
Length = 159
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+++ D S+Q+ +Y +LI+ NGG+V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVYIVHPD-QSEQVPAMTERYTALIKSNGGQVHRSEDWGRRILAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD-RNDRFPRD 119
V +NI + E++ R ++ +LR L + + P++ ++ +R++ R D
Sbjct: 60 VCLNIECNQETLDELENNFRYNDAILRHLVIKQKAAVTEPSIMMKSTEREESRKAASAED 119
Query: 120 RNVDRKQHVSEE 131
RN + H +E+
Sbjct: 120 RNSSKANHSAED 131
>gi|167836329|ref|ZP_02463212.1| 30S ribosomal protein S6 [Burkholderia thailandensis MSMB43]
Length = 124
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI A + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|154148390|ref|YP_001405847.1| 30S ribosomal protein S6 [Campylobacter hominis ATCC BAA-381]
gi|166226816|sp|A7I006|RS6_CAMHC RecName: Full=30S ribosomal protein S6
gi|153804399|gb|ABS51406.1| ribosomal protein S6 [Campylobacter hominis ATCC BAA-381]
Length = 145
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+++ + ++K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYEVLFIVKPTLQDDEVKTKVDFVKEVITKNGGEIAAVVEMGTRKLAYKIDKYERGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E+ R +RI+E+++R LT+
Sbjct: 61 FVIYFTAPTKLIAELVRNLRINEDIIRFLTI 91
>gi|332983148|ref|YP_004464589.1| 30S ribosomal protein S6P [Mahella australiensis 50-1 BON]
gi|332700826|gb|AEE97767.1| SSU ribosomal protein S6P [Mahella australiensis 50-1 BON]
Length = 96
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ + ++ + I ++++LI E GGEVR V+E G R +AY I+ + YY
Sbjct: 1 MREYETMFVINPTLDAEATQAVIERFKNLISEQGGEVRNVDEWGRRKLAYEIKDFNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M A+ P E++R +I ++++R L +
Sbjct: 61 VLMEFAANPDLPAELERVYKITDDIIRYLII 91
>gi|240080470|ref|ZP_04725013.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA19]
gi|268596607|ref|ZP_06130774.1| ribosomal protein S6 [Neisseria gonorrhoeae FA19]
gi|268550395|gb|EEZ45414.1| ribosomal protein S6 [Neisseria gonorrhoeae FA19]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR LT+
Sbjct: 60 VLMNIETTPEVVGELETAFRFNDAVLRHLTI 90
>gi|115314808|ref|YP_763531.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
OSU18]
gi|115129707|gb|ABI82894.1| ribosomal protein S6 [Francisella tularensis subsp. holarctica
OSU18]
Length = 120
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y +I+E GG++ + G R +AY I K KA+Y
Sbjct: 10 MKHYEVVLMIHPD-QSDQLDAMLGKYCGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 69 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 118
>gi|261839965|gb|ACX99730.1| 30S ribosomal protein S6 [Helicobacter pylori 52]
Length = 142
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYSEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|104773264|ref|YP_618244.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|300812006|ref|ZP_07092462.1| ribosomal protein S6 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313122782|ref|YP_004033041.1| 30S ribosomal protein s6 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|103422345|emb|CAI96853.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|300497032|gb|EFK32098.1| ribosomal protein S6 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279345|gb|ADQ60064.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325124862|gb|ADY84192.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325685100|gb|EGD27231.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 97
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK-AYYVF 62
YE ++++ D+ + K I +Y +I +NGGE+ + G R AY I K R+ +YY+
Sbjct: 5 YEITYIIKPDVDDEAKKAIIDKYTKVIADNGGEMVEAKDWGKRRFAYEIEKYREGSYYIM 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
A AA++E R +ID++VLRS+T+ +D
Sbjct: 65 TFTAEDAAAVNEFARLSKIDDSVLRSMTVKLD 96
>gi|90408974|ref|ZP_01217106.1| 30S ribosomal protein S6 [Psychromonas sp. CNPT3]
gi|90309922|gb|EAS38075.1| 30S ribosomal protein S6 [Psychromonas sp. CNPT3]
Length = 130
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVNGMIERYTTSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH-EQSPTLTIQRHDRDDRNDRFPR 118
V MNI + + +++ R ++ V+R++ + + ++ + R +R +R DR PR
Sbjct: 60 VLMNIEAEQNVLDDLENAFRFNDAVIRTMIMRTKTAVTEASVVAKAREERSERADRAPR 118
>gi|53729064|ref|ZP_00348308.1| COG0360: Ribosomal protein S6 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|165976599|ref|YP_001652192.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190150499|ref|YP_001969024.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|254361767|ref|ZP_04977902.1| ribosomal protein S6 [Mannheimia haemolytica PHL213]
gi|261494031|ref|ZP_05990534.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496209|ref|ZP_05992615.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|303250079|ref|ZP_07336281.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303253252|ref|ZP_07339401.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307246087|ref|ZP_07528169.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307248195|ref|ZP_07530223.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307250427|ref|ZP_07532374.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307252812|ref|ZP_07534702.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307255068|ref|ZP_07536886.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307257227|ref|ZP_07538998.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307259505|ref|ZP_07541230.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261654|ref|ZP_07543321.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263842|ref|ZP_07545447.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322515406|ref|ZP_08068398.1| 30S ribosomal protein S6 [Actinobacillus ureae ATCC 25976]
gi|226703411|sp|B3GY59|RS6_ACTP7 RecName: Full=30S ribosomal protein S6
gi|226703412|sp|B0BQB3|RS6_ACTPJ RecName: Full=30S ribosomal protein S6
gi|153093302|gb|EDN74298.1| ribosomal protein S6 [Mannheimia haemolytica PHL213]
gi|165876700|gb|ABY69748.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189915630|gb|ACE61882.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|261308161|gb|EEY09458.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310197|gb|EEY11397.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|302647934|gb|EFL78141.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302651142|gb|EFL81296.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853022|gb|EFM85245.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855372|gb|EFM87547.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306857556|gb|EFM89665.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306859711|gb|EFM91734.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306861941|gb|EFM93917.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306864269|gb|EFM96181.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306866441|gb|EFM98304.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868646|gb|EFN00456.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870831|gb|EFN02570.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322118561|gb|EFX90793.1| 30S ribosomal protein S6 [Actinobacillus ureae ATCC 25976]
Length = 124
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P + I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIV 90
>gi|260767149|ref|ZP_05876093.1| SSU ribosomal protein S6p [Vibrio furnissii CIP 102972]
gi|260617870|gb|EEX43045.1| SSU ribosomal protein S6p [Vibrio furnissii CIP 102972]
gi|315181339|gb|ADT88253.1| 30S ribosomal protein S6 [Vibrio furnissii NCTC 11218]
Length = 122
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRND-RFPR 118
V MN+ + A I E++ R ++ VLR++ + + P++ ++ + +R R++ +F
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAKEERSKRDEAKFEA 119
Query: 119 D 119
D
Sbjct: 120 D 120
>gi|149377617|ref|ZP_01895355.1| ribosomal protein S6 [Marinobacter algicola DG893]
gi|149358090|gb|EDM46574.1| ribosomal protein S6 [Marinobacter algicola DG893]
Length = 138
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTGVITEDGGKVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI AA+ E+ R ++ ++R + L
Sbjct: 60 VLMNIECSQAAMDELTHNFRFNDAIIRDMIL 90
>gi|15612232|ref|NP_223885.1| 30S ribosomal protein S6 [Helicobacter pylori J99]
gi|7388226|sp|Q9ZJY1|RS6_HELPJ RecName: Full=30S ribosomal protein S6
gi|4155764|gb|AAD06741.1| 30S RIBOSOMAL PROTEIN S6 [Helicobacter pylori J99]
Length = 142
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRN 113
++ +
Sbjct: 121 EKTEHT 126
>gi|307566428|ref|ZP_07628863.1| 30S ribosomal protein S6 [Prevotella amnii CRIS 21A-A]
gi|307344853|gb|EFN90255.1| 30S ribosomal protein S6 [Prevotella amnii CRIS 21A-A]
Length = 114
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDDQMKETVAKFKTLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ ++ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFKAEPSVVNTLETGFRRDERVIRYITVKQDKYSAA 99
>gi|207110026|ref|ZP_03244188.1| 30S ribosomal protein S6 [Helicobacter pylori HPKX_438_CA4C1]
Length = 136
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 7 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 67 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 126
Query: 108 DRDD 111
++ +
Sbjct: 127 EKPN 130
>gi|113461581|ref|YP_719650.1| 30S ribosomal protein S6 [Haemophilus somnus 129PT]
gi|123132186|sp|Q0I4E5|RS6_HAES1 RecName: Full=30S ribosomal protein S6
gi|112823624|gb|ABI25713.1| SSU ribosomal protein S6P [Haemophilus somnus 129PT]
Length = 125
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y S I+E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTSSIKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVII 90
>gi|317014637|gb|ADU82073.1| 30S ribosomal protein S6 [Helicobacter pylori Gambia94/24]
Length = 142
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDD 111
++ +
Sbjct: 121 EKTE 124
>gi|15640393|ref|NP_230020.1| 30S ribosomal protein S6 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590972|ref|ZP_01678292.1| ribosomal protein S6 [Vibrio cholerae 2740-80]
gi|121730195|ref|ZP_01682585.1| ribosomal protein S6 [Vibrio cholerae V52]
gi|147675449|ref|YP_001218635.1| 30S ribosomal protein S6 [Vibrio cholerae O395]
gi|153216649|ref|ZP_01950556.1| ribosomal protein S6 [Vibrio cholerae 1587]
gi|153820255|ref|ZP_01972922.1| ribosomal protein S6 [Vibrio cholerae NCTC 8457]
gi|153827636|ref|ZP_01980303.1| ribosomal protein S6 [Vibrio cholerae MZO-2]
gi|153830466|ref|ZP_01983133.1| ribosomal protein S6 [Vibrio cholerae 623-39]
gi|227080578|ref|YP_002809129.1| ribosomal protein S6 [Vibrio cholerae M66-2]
gi|229504949|ref|ZP_04394460.1| SSU ribosomal protein S6p [Vibrio cholerae BX 330286]
gi|229508613|ref|ZP_04398109.1| SSU ribosomal protein S6p [Vibrio cholerae B33]
gi|229512614|ref|ZP_04402084.1| SSU ribosomal protein S6p [Vibrio cholerae TMA 21]
gi|229516025|ref|ZP_04405476.1| SSU ribosomal protein S6p [Vibrio cholerae RC9]
gi|229519927|ref|ZP_04409358.1| SSU ribosomal protein S6p [Vibrio cholerae TM 11079-80]
gi|229525060|ref|ZP_04414465.1| SSU ribosomal protein S6p [Vibrio cholerae bv. albensis VL426]
gi|229526941|ref|ZP_04416338.1| SSU ribosomal protein S6p [Vibrio cholerae 12129(1)]
gi|229606353|ref|YP_002877001.1| 30S ribosomal protein S6 [Vibrio cholerae MJ-1236]
gi|254286210|ref|ZP_04961169.1| ribosomal protein S6 [Vibrio cholerae AM-19226]
gi|254851677|ref|ZP_05241027.1| 30S ribosomal protein S6 [Vibrio cholerae MO10]
gi|255747164|ref|ZP_05421107.1| SSU ribosomal protein S6p [Vibrio cholera CIRS 101]
gi|262166876|ref|ZP_06034598.1| SSU ribosomal protein S6p [Vibrio cholerae RC27]
gi|297582250|ref|ZP_06944165.1| ribosomal protein S6 [Vibrio cholerae RC385]
gi|298501263|ref|ZP_07011061.1| ribosomal protein S6 [Vibrio cholerae MAK 757]
gi|13959535|sp|Q9KUZ2|RS6_VIBCH RecName: Full=30S ribosomal protein S6
gi|189045594|sp|A5F3K3|RS6_VIBC3 RecName: Full=30S ribosomal protein S6
gi|254765463|sp|C3LR98|RS6_VIBCM RecName: Full=30S ribosomal protein S6
gi|9654783|gb|AAF93539.1| ribosomal protein S6 [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547198|gb|EAX57325.1| ribosomal protein S6 [Vibrio cholerae 2740-80]
gi|121628053|gb|EAX60598.1| ribosomal protein S6 [Vibrio cholerae V52]
gi|124114160|gb|EAY32980.1| ribosomal protein S6 [Vibrio cholerae 1587]
gi|126509206|gb|EAZ71800.1| ribosomal protein S6 [Vibrio cholerae NCTC 8457]
gi|146317332|gb|ABQ21871.1| ribosomal protein S6 [Vibrio cholerae O395]
gi|148874068|gb|EDL72203.1| ribosomal protein S6 [Vibrio cholerae 623-39]
gi|149737886|gb|EDM52791.1| ribosomal protein S6 [Vibrio cholerae MZO-2]
gi|150423625|gb|EDN15567.1| ribosomal protein S6 [Vibrio cholerae AM-19226]
gi|227008466|gb|ACP04678.1| ribosomal protein S6 [Vibrio cholerae M66-2]
gi|227012222|gb|ACP08432.1| ribosomal protein S6 [Vibrio cholerae O395]
gi|229335553|gb|EEO01033.1| SSU ribosomal protein S6p [Vibrio cholerae 12129(1)]
gi|229338641|gb|EEO03658.1| SSU ribosomal protein S6p [Vibrio cholerae bv. albensis VL426]
gi|229343055|gb|EEO08042.1| SSU ribosomal protein S6p [Vibrio cholerae TM 11079-80]
gi|229346928|gb|EEO11895.1| SSU ribosomal protein S6p [Vibrio cholerae RC9]
gi|229350396|gb|EEO15346.1| SSU ribosomal protein S6p [Vibrio cholerae TMA 21]
gi|229354381|gb|EEO19308.1| SSU ribosomal protein S6p [Vibrio cholerae B33]
gi|229358007|gb|EEO22923.1| SSU ribosomal protein S6p [Vibrio cholerae BX 330286]
gi|229369008|gb|ACQ59431.1| SSU ribosomal protein S6p [Vibrio cholerae MJ-1236]
gi|254847382|gb|EET25796.1| 30S ribosomal protein S6 [Vibrio cholerae MO10]
gi|255735213|gb|EET90615.1| SSU ribosomal protein S6p [Vibrio cholera CIRS 101]
gi|262024706|gb|EEY43385.1| SSU ribosomal protein S6p [Vibrio cholerae RC27]
gi|297533508|gb|EFH72354.1| ribosomal protein S6 [Vibrio cholerae RC385]
gi|297540017|gb|EFH76080.1| ribosomal protein S6 [Vibrio cholerae MAK 757]
Length = 122
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A + E++ R ++ VLR++ + + P++ ++ + + D D
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDA 119
Query: 121 NVD 123
+V+
Sbjct: 120 DVE 122
>gi|87119508|ref|ZP_01075405.1| 30S ribosomal protein S6 [Marinomonas sp. MED121]
gi|86164984|gb|EAQ66252.1| 30S ribosomal protein S6 [Marinomonas sp. MED121]
Length = 135
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMVERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MNI + A + E+ R ++ ++R+L + E SP + R+DR R PR
Sbjct: 60 VLMNIEASEAVMSELNDTFRYNDAIIRNLVIRRKGAVTEVSPIKAAE--SREDR--RAPR 115
Query: 119 DRNVDRKQ 126
+ +R +
Sbjct: 116 EERQERTE 123
>gi|220934099|ref|YP_002512998.1| ribosomal protein S6 [Thioalkalivibrio sp. HL-EbGR7]
gi|254765462|sp|B8GNS2|RS6_THISH RecName: Full=30S ribosomal protein S6
gi|219995409|gb|ACL72011.1| ribosomal protein S6 [Thioalkalivibrio sp. HL-EbGR7]
Length = 138
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ LI+ +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSAMIERYRGLIEGDGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V MN+ AA+ E+ R ++ V+R + +L++ E SP
Sbjct: 60 VLMNVECGEAALAELVSAFRFNDAVIRHMVMLMERAFTEASP 101
>gi|85058323|ref|YP_454025.1| 30S ribosomal protein S6 [Sodalis glossinidius str. 'morsitans']
gi|123520151|sp|Q2NW55|RS6_SODGM RecName: Full=30S ribosomal protein S6
gi|84778843|dbj|BAE73620.1| 30S ribosomal protein S6 [Sodalis glossinidius str. 'morsitans']
Length = 131
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S+Q+ I +Y +LI G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFMVHPD-QSEQVAGMIERYSALITGAEGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + V E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQEVIDELETVFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRERRED-FAT 118
Query: 119 DRNVDRKQHVSEE 131
+ N D SEE
Sbjct: 119 ETNEDSDAGDSEE 131
>gi|169335536|ref|ZP_02862729.1| hypothetical protein ANASTE_01950 [Anaerofustis stercorihominis
DSM 17244]
gi|169258274|gb|EDS72240.1| hypothetical protein ANASTE_01950 [Anaerofustis stercorihominis
DSM 17244]
Length = 98
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M+ YE +F +R D++ +++K + + Q++I NGG+V V+E GM+ +AY+I K R AY
Sbjct: 4 MQKYETLFAVRPDMTEEEVKAMVEKIQNVITSNGGKVEEVDEWGMKKLAYKINNKYRDAY 63
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y +N + + + RI E+++R + +
Sbjct: 64 YTLINFEAEKPCLDALNHTFRITEDIIRDIIV 95
>gi|15677189|ref|NP_274342.1| 30S ribosomal protein S6 [Neisseria meningitidis MC58]
gi|13959510|sp|Q9JZ29|RS6_NEIMB RecName: Full=30S ribosomal protein S6
gi|7226565|gb|AAF41698.1| 30S ribosomal protein S6 [Neisseria meningitidis MC58]
Length = 122
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ +LR LT+
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAILRHLTI 90
>gi|297627499|ref|YP_003689262.1| 30S ribosomal protein S6 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296923264|emb|CBL57861.1| 30S ribosomal protein S6 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 104
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D+ +Q++ + +Y ++I + GG V V+ G R +AY I+K + Y
Sbjct: 10 MRKYEVMAIISPDVDERQLQPIVDKYTAIITKEGGTVDNVDIWGRRHLAYPIQKKTEGLY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ PA++ EM R M IDE V+R+ + +DS
Sbjct: 70 AVIDLTCEPASVSEMNRLMGIDEQVMRTKVMRIDS 104
>gi|253999143|ref|YP_003051206.1| 30S ribosomal protein S6 [Methylovorus sp. SIP3-4]
gi|313201244|ref|YP_004039902.1| 30S ribosomal protein S6 [Methylovorus sp. MP688]
gi|253985822|gb|ACT50679.1| ribosomal protein S6 [Methylovorus sp. SIP3-4]
gi|312440560|gb|ADQ84666.1| ribosomal protein S6 [Methylovorus sp. MP688]
Length = 125
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYRTLVTSNGGAIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR LT+ +P+
Sbjct: 60 VLMNIECNQTVLEELEHAFKFNDAVLRHLTIATKEAVVAPS 100
>gi|254516843|ref|ZP_05128901.1| Na+/solute symporter [gamma proteobacterium NOR5-3]
gi|219674348|gb|EED30716.1| Na+/solute symporter [gamma proteobacterium NOR5-3]
Length = 149
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++I ++GG V + + G R +A+ I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYSNIITKDGGSVHRMEDWGRRQLAFPISKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRF 116
+ MN+ + A+ E+ R ++ V+R+L + D+ E+SP + ++ R +R R+
Sbjct: 60 ILMNVEASNEAMDELTTTFRYNDAVIRNLVIRRDAPDLEESPIMKAEKESR-ERKSRY 116
>gi|57239414|ref|YP_180550.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58579386|ref|YP_197598.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58617441|ref|YP_196640.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Gardel]
gi|75356738|sp|Q5FG27|RS6_EHRRG RecName: Full=30S ribosomal protein S6
gi|81352829|sp|Q5HAJ4|RS6_EHRRW RecName: Full=30S ribosomal protein S6
gi|57161493|emb|CAH58419.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58417053|emb|CAI28166.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Gardel]
gi|58418012|emb|CAI27216.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
Length = 109
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYAIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
M I S ++ E KRK+R++E+VLR L L D + +L +Q
Sbjct: 61 CMMYIRSSSTSMDEFKRKVRLNEDVLRFLCLKRDKLPEGDSLMVQ 105
>gi|315635661|ref|ZP_07890924.1| 30S ribosomal protein S6 [Arcobacter butzleri JV22]
gi|315479958|gb|EFU70628.1| 30S ribosomal protein S6 [Arcobacter butzleri JV22]
Length = 107
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 61/99 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F+L+ ++ ++ I ++LI++NGGE+ + +G+R +AY I K ++ YY
Sbjct: 4 IKHYETMFILKPTLTEEETVAQIDGIKALIEKNGGEISSTDNVGIRELAYEIEKCKRGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ P+ I E++R R +EN++R + + D+ ++S
Sbjct: 64 YVIYFKGNPSGIAEIERNYRNNENLIRFIFIKYDTKKRS 102
>gi|119471284|ref|ZP_01613787.1| 30S ribosomal protein S6 [Alteromonadales bacterium TW-7]
gi|119445750|gb|EAW27033.1| 30S ribosomal protein S6 [Alteromonadales bacterium TW-7]
Length = 113
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGSIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V MN+ +P I E++ R ++ VLR+L + S E SP
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVIRTKSAVTEASP 101
>gi|294139214|ref|YP_003555192.1| 30S ribosomal protein S6 [Shewanella violacea DSS12]
gi|293325683|dbj|BAJ00414.1| ribosomal protein S6 [Shewanella violacea DSS12]
Length = 140
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPSMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + ++ E++ R ++ VLRS+ L + E SP + + +RD R
Sbjct: 60 VLMNVEASAESVEELETAFRFNDAVLRSMVLRTKAAITEASPMAKL-KEERDSRRSTEGE 118
Query: 119 DRNVDRKQHVSEEK 132
R+ ++ V E K
Sbjct: 119 RRSAPAEKAVEEVK 132
>gi|192358927|ref|YP_001983437.1| 30S ribosomal protein S6 [Cellvibrio japonicus Ueda107]
gi|226703436|sp|B3PCS2|RS6_CELJU RecName: Full=30S ribosomal protein S6
gi|190685092|gb|ACE82770.1| 30S ribosomal protein S6 [Cellvibrio japonicus Ueda107]
Length = 147
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y S ++ +GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVVLIHPD-QSEQVPAMVERYTSTVKADGGQVHRFEDWGRRQLAYSINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRD 110
V +N+ AA+ E+ R ++ VLRSL + D+ E+S L ++ R+
Sbjct: 60 VLLNVECSDAALEELTTNFRYNDAVLRSLVIREDAAITEESFILKAEKEGRE 111
>gi|59801012|ref|YP_207724.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA 1090]
gi|239999183|ref|ZP_04719107.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|240016351|ref|ZP_04722891.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA6140]
gi|240115918|ref|ZP_04729980.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|240118216|ref|ZP_04732278.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|240123764|ref|ZP_04736720.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|240125955|ref|ZP_04738841.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|254493954|ref|ZP_05107125.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 1291]
gi|260440267|ref|ZP_05794083.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
gi|268595013|ref|ZP_06129180.1| ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|268601588|ref|ZP_06135755.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|268603927|ref|ZP_06138094.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|268682390|ref|ZP_06149252.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|268684548|ref|ZP_06151410.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|291043561|ref|ZP_06569277.1| ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
gi|3122818|sp|O07813|RS6_NEIGO RecName: Full=30S ribosomal protein S6
gi|75432531|sp|Q5F925|RS6_NEIG1 RecName: Full=30S ribosomal protein S6
gi|2196757|gb|AAB61228.1| ribosomal protein S6 [Neisseria gonorrhoeae]
gi|59717907|gb|AAW89312.1| putative 30S ribosomal protein S6 [Neisseria gonorrhoeae FA 1090]
gi|226512994|gb|EEH62339.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 1291]
gi|268548402|gb|EEZ43820.1| ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|268585719|gb|EEZ50395.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|268588058|gb|EEZ52734.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|268622674|gb|EEZ55074.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|268624832|gb|EEZ57232.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|291012024|gb|EFE04013.1| ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
Length = 122
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + P + E++ R ++ VLR LT+ E SP L
Sbjct: 60 VLMNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|325996521|gb|ADZ51926.1| 30S ribosomal protein S6 [Helicobacter pylori 2018]
gi|325998109|gb|ADZ50317.1| 30S ribosomal protein S6 [Helicobacter pylori 2017]
Length = 142
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHYGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-------------LVDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + LVD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDD 111
++ +
Sbjct: 121 EKTE 124
>gi|258622407|ref|ZP_05717430.1| 30S ribosomal protein S6 [Vibrio mimicus VM573]
gi|258625992|ref|ZP_05720857.1| 30S ribosomal protein S6 [Vibrio mimicus VM603]
gi|261210397|ref|ZP_05924691.1| SSU ribosomal protein S6p [Vibrio sp. RC341]
gi|262163854|ref|ZP_06031594.1| SSU ribosomal protein S6p [Vibrio mimicus VM223]
gi|262172537|ref|ZP_06040215.1| SSU ribosomal protein S6p [Vibrio mimicus MB-451]
gi|262401543|ref|ZP_06078110.1| SSU ribosomal protein S6p [Vibrio sp. RC586]
gi|258581740|gb|EEW06624.1| 30S ribosomal protein S6 [Vibrio mimicus VM603]
gi|258585321|gb|EEW10047.1| 30S ribosomal protein S6 [Vibrio mimicus VM573]
gi|260840455|gb|EEX67021.1| SSU ribosomal protein S6p [Vibrio sp. RC341]
gi|261893613|gb|EEY39599.1| SSU ribosomal protein S6p [Vibrio mimicus MB-451]
gi|262027834|gb|EEY46499.1| SSU ribosomal protein S6p [Vibrio mimicus VM223]
gi|262352258|gb|EEZ01387.1| SSU ribosomal protein S6p [Vibrio sp. RC586]
Length = 122
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A + E++ R ++ VLR++ + + P++ ++ + + D D
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEVKFDA 119
Query: 121 NVD 123
+V+
Sbjct: 120 DVE 122
>gi|311105033|ref|YP_003977886.1| 30S ribosomal protein S6 [Achromobacter xylosoxidans A8]
gi|310759722|gb|ADP15171.1| ribosomal protein S6 [Achromobacter xylosoxidans A8]
Length = 125
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI A + E++ R ++ VLR L + + +P++ ++ +R
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQATPSIMMKSVER 108
>gi|300115388|ref|YP_003761963.1| 30S ribosomal protein S6 [Nitrosococcus watsonii C-113]
gi|299541325|gb|ADJ29642.1| ribosomal protein S6 [Nitrosococcus watsonii C-113]
Length = 156
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQLSAMMDRYRQMIEVDGGRIHRLEDWGRRQLAYPIQKLYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI P AI E+ R ++ VLR + +
Sbjct: 60 VLMNIECTPRAIEELTSAFRFNDAVLRDMVI 90
>gi|332710818|ref|ZP_08430755.1| SSU ribosomal protein S6P [Lyngbya majuscula 3L]
gi|332350371|gb|EGJ29974.1| SSU ribosomal protein S6P [Lyngbya majuscula 3L]
Length = 102
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR D+ +Q+ IG+Y+ L+QE GGE + G R +AY I + R+ Y+ MN
Sbjct: 1 MYILRPDLGEEQVDQAIGKYRDLLQELGGEQIEIQHRGKRRLAYPIDRYREGIYIQMNYN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
P + +++R MR+ ++V+R LT+ E SP T
Sbjct: 61 GPGTHVAKIERAMRLSQDVIRYLTI---RQESSPAPT 94
>gi|319938328|ref|ZP_08012724.1| 30S ribosomal protein S6 [Coprobacillus sp. 29_1]
gi|319806511|gb|EFW03173.1| 30S ribosomal protein S6 [Coprobacillus sp. 29_1]
Length = 94
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ I ++ ++ G V VNE G+R +AY I+ K YY
Sbjct: 1 MNKYEIMFIVKPDVEEDARNAIIENFKKVLTNTEGTVDNVNEWGLRDLAYEIKDYTKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ + PA I E +R RI+ N+LR LTL
Sbjct: 61 VVLDTTTTPANIAEFERLSRINANMLRHLTL 91
>gi|56422017|ref|YP_149335.1| 30S ribosomal protein S6 [Geobacillus kaustophilus HTA426]
gi|261420891|ref|YP_003254573.1| 30S ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297531676|ref|YP_003672951.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|319768562|ref|YP_004134063.1| ribosomal protein S6 [Geobacillus sp. Y412MC52]
gi|61215358|sp|Q5KU69|RS6_GEOKA RecName: Full=30S ribosomal protein S6
gi|56381859|dbj|BAD77767.1| 30S ribosomal protein S6 (BS9) [Geobacillus kaustophilus HTA426]
gi|261377348|gb|ACX80091.1| ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297254928|gb|ADI28374.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|317113428|gb|ADU95920.1| ribosomal protein S6 [Geobacillus sp. Y412MC52]
Length = 95
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R YY
Sbjct: 1 MRKYEIMYIIRPNMDDEARQALVERFNNVLKENGAEITNVTDWGKRRLAYEIQKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S P A+ E R RI E+++R + +
Sbjct: 61 MIVNVVSEPKAVQEFDRLARISEDIIRHIVV 91
>gi|326796492|ref|YP_004314312.1| 30S ribosomal protein S6 [Marinomonas mediterranea MMB-1]
gi|326547256|gb|ADZ92476.1| 30S ribosomal protein S6 [Marinomonas mediterranea MMB-1]
Length = 135
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMIERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + A + E+ R ++ ++R++ +
Sbjct: 60 VLMNIEASEAVLAELNDTFRYNDAIIRNMVI 90
>gi|323142970|ref|ZP_08077678.1| ribosomal protein S6 [Succinatimonas hippei YIT 12066]
gi|322417243|gb|EFY07869.1| ribosomal protein S6 [Succinatimonas hippei YIT 12066]
Length = 139
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y+ I++ GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSDQVPGMIERYKGEIEKTGGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + AI ++ R ++ V+R+L + + EQSP + R +R R
Sbjct: 60 VLMNVEAEQEAIDSIENNFRFNDAVIRNLVIRTNGPVTEQSPMMKA-------REERRAR 112
Query: 119 DRNVDRKQH 127
+ + +++QH
Sbjct: 113 EDDGEQRQH 121
>gi|288802529|ref|ZP_06407968.1| ribosomal protein S6 [Prevotella melaninogenica D18]
gi|288335057|gb|EFC73493.1| ribosomal protein S6 [Prevotella melaninogenica D18]
Length = 114
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPTVIDTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|152997468|ref|YP_001342303.1| 30S ribosomal protein S6 [Marinomonas sp. MWYL1]
gi|189045475|sp|A6W0Y9|RS6_MARMS RecName: Full=30S ribosomal protein S6
gi|150838392|gb|ABR72368.1| ribosomal protein S6 [Marinomonas sp. MWYL1]
Length = 134
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMVERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR-D 119
V MNI + + E+ R ++ ++R+L + + R+DR R +
Sbjct: 60 VLMNIECSDSVLSELNDTFRYNDAIIRNLVIRRKEAVTDVSPIKASEGREDRRSAPQREE 119
Query: 120 RNVDRKQHVSEE 131
RN D VSEE
Sbjct: 120 RNHDNSDEVSEE 131
>gi|282880328|ref|ZP_06289042.1| ribosomal protein S6 [Prevotella timonensis CRIS 5C-B1]
gi|281305830|gb|EFA97876.1| ribosomal protein S6 [Prevotella timonensis CRIS 5C-B1]
Length = 114
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ G++ +AY+I+K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKETVAKFKTLLTDNGAEILNEEAWGLKKLAYQIQKKNSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P + ++ R DE V+R +T+ +D +
Sbjct: 61 CLFEFKGEPTLVDTLEIGFRRDEKVIRFMTVKLDKY 96
>gi|91788897|ref|YP_549849.1| 30S ribosomal protein S6 [Polaromonas sp. JS666]
gi|123164720|sp|Q128U1|RS6_POLSJ RecName: Full=30S ribosomal protein S6
gi|91698122|gb|ABE44951.1| SSU ribosomal protein S6P [Polaromonas sp. JS666]
Length = 121
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V V + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLVYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E P+L ++ +R++
Sbjct: 60 LCINIEASQAVMEEIEHAFKFNDAVLRHLTVVKKKAETGPSLMMRNVEREE 110
>gi|33152177|ref|NP_873530.1| 30S ribosomal protein S6 [Haemophilus ducreyi 35000HP]
gi|61215717|sp|Q7VMD7|RS6_HAEDU RecName: Full=30S ribosomal protein S6
gi|33148399|gb|AAP95919.1| 30S ribosomal protein S6 [Haemophilus ducreyi 35000HP]
Length = 124
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + + E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVTEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P + I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPKSVIDELETNFRYNDAVLRNLIV 90
>gi|317177988|dbj|BAJ55777.1| 30S ribosomal protein S6 [Helicobacter pylori F16]
Length = 142
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 59/95 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P+ I E++R RI+E+VLR + + +S
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYES 95
>gi|300691705|ref|YP_003752700.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum PSI07]
gi|299078765|emb|CBJ51425.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum PSI07]
Length = 122
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCMNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|158335092|ref|YP_001516264.1| 30S ribosomal protein S6 [Acaryochloris marina MBIC11017]
gi|158305333|gb|ABW26950.1| 30S ribosomal protein S6 [Acaryochloris marina MBIC11017]
Length = 108
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR D+ +Q+ I +YQ L++E G E G R +AY I+ R+ Y
Sbjct: 1 MTAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN AI +++R+MRI E V+R LTL
Sbjct: 61 IQMNYNGQGHAIAKLEREMRISEQVIRYLTL 91
>gi|119502818|ref|ZP_01624903.1| Na+/solute symporter [marine gamma proteobacterium HTCC2080]
gi|119461164|gb|EAW42254.1| Na+/solute symporter [marine gamma proteobacterium HTCC2080]
Length = 151
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I ++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFMVHPD-QSEQVPGMIERYSAVITKDGGTVHRLEDWGRRQLAYHINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRF 116
+ MN+ + A+ E+ R ++ V+R+L + D E+S + ++ DR +R R+
Sbjct: 60 ILMNVEASNEAMEELSTTFRYNDAVIRNLVIRRDELVAEESLIMKAEKEDR-ERKSRY 116
>gi|172059040|ref|YP_001815500.1| 30S ribosomal protein S6 [Exiguobacterium sibiricum 255-15]
gi|226703468|sp|B1YG99|RS6_EXIS2 RecName: Full=30S ribosomal protein S6
gi|171991561|gb|ACB62483.1| ribosomal protein S6 [Exiguobacterium sibiricum 255-15]
Length = 95
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ ++ +NGG V E+G R AY I R+ +Y
Sbjct: 1 MRKYEVLYIIRPEVDEEARKALVERFNKVLTDNGGTVEKTTEMGKRRFAYEINDMREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
V +N+ + PAA E+ R M+I ++++R
Sbjct: 61 VLLNVTAEPAATKELDRLMKISDDIVR 87
>gi|253573876|ref|ZP_04851218.1| 30S ribosomal protein S6 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251846353|gb|EES74359.1| 30S ribosomal protein S6 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 94
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + ++ T+ ++Q +IQ NGGE+ LG R +AY I K R Y
Sbjct: 1 MRKYEVMYIIRPDVEQEAVQATVEKFQGIIQ-NGGEITKHEVLGKRRLAYEINKVRDGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N + P + E++R ++I + V+R L
Sbjct: 60 VLVNFTAAPEVVAELERILKISDEVIRYL 88
>gi|254467837|ref|ZP_05081243.1| ribosomal protein S6 [beta proteobacterium KB13]
gi|207086647|gb|EDZ63930.1| ribosomal protein S6 [beta proteobacterium KB13]
Length = 128
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +YQ+L++ N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYQTLLKTNSGNIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR LT + +P+
Sbjct: 60 VLMNIECDQKTLEELETSFKFNDAVLRHLTFATKNAVTAPS 100
>gi|304383091|ref|ZP_07365566.1| 30S ribosomal protein S6 [Prevotella marshii DSM 16973]
gi|304335777|gb|EFM02032.1| 30S ribosomal protein S6 [Prevotella marshii DSM 16973]
Length = 115
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T+ ++++L+ E G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRNLLVEKGAEI--VNEETWGLKKMAYAIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I+ ++ + R +E V+R +T+ +D +
Sbjct: 59 FYCLLEFKAEPEVINTLETQFRREEKVIRFMTVKLDKY 96
>gi|295697818|ref|YP_003591056.1| ribosomal protein S6 [Bacillus tusciae DSM 2912]
gi|295413420|gb|ADG07912.1| ribosomal protein S6 [Bacillus tusciae DSM 2912]
Length = 95
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ + D + + ++ GGE++ VN G R +AY I +R+ YY
Sbjct: 1 MRNYETLYILRPDLEEEATADQVKRLAEVVTTAGGELQEVNTWGKRRMAYEIEGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M AS E++R +RI E VLR + +
Sbjct: 61 VLMKFASDTEVPKELERVLRISEPVLRYIVV 91
>gi|157963400|ref|YP_001503434.1| 30S ribosomal protein S6 [Shewanella pealeana ATCC 700345]
gi|189045848|sp|A8H8L2|RS6_SHEPA RecName: Full=30S ribosomal protein S6
gi|157848400|gb|ABV88899.1| ribosomal protein S6 [Shewanella pealeana ATCC 700345]
Length = 137
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR---NDR 115
V MN+ + A+ E++ R ++ VLRS+ + + E SP + + +RD R +R
Sbjct: 60 VLMNVETTAEAVEELETAFRFNDAVLRSMVMRTKAAITEASP-MAKAKDERDTRRSSEER 118
Query: 116 FPR 118
PR
Sbjct: 119 APR 121
>gi|73541694|ref|YP_296214.1| 30S ribosomal protein S6 [Ralstonia eutropha JMP134]
gi|91207785|sp|Q46ZR3|RS6_RALEJ RecName: Full=30S ribosomal protein S6
gi|72119107|gb|AAZ61370.1| SSU ribosomal protein S6P [Ralstonia eutropha JMP134]
Length = 124
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+SL+ GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSLVTSQGGQVHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCVNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|238027016|ref|YP_002911247.1| 30S ribosomal protein S6 [Burkholderia glumae BGR1]
gi|237876210|gb|ACR28543.1| Ribosomal protein S6 [Burkholderia glumae BGR1]
Length = 124
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITTRGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI A + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|308184993|ref|YP_003929126.1| 30S ribosomal protein S6 [Helicobacter pylori SJM180]
gi|308060913|gb|ADO02809.1| 30S ribosomal protein S6 [Helicobacter pylori SJM180]
Length = 142
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ P+ I E++R RI+E+VLR + + +S ++ H DR ++ P
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAW----HALVDRANKKP 113
>gi|90416566|ref|ZP_01224497.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2207]
gi|90331765|gb|EAS46993.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2207]
Length = 153
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y + I+ G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVSGMIERYTASIEAGEGKVHRMEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
+ MN+ + E+ R ++ VLRSL + D +SP + I+ D+ D+ R R
Sbjct: 60 ILMNVECSQEVLDELSSTFRYNDAVLRSLVVRRDEAITAESPIMKIENADKADKEARERR 119
Query: 119 D 119
+
Sbjct: 120 N 120
>gi|71281997|ref|YP_267173.1| 30S ribosomal protein S6 [Colwellia psychrerythraea 34H]
gi|91207909|sp|Q489U1|RS6_COLP3 RecName: Full=30S ribosomal protein S6
gi|71147737|gb|AAZ28210.1| ribosomal protein S6 [Colwellia psychrerythraea 34H]
Length = 143
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y LI G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSGMIQRYTDLINAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR 112
V MNI +P I E++ R ++ V+R++ + E SP + RDDR
Sbjct: 60 VLMNIEAPQVVIDELETAFRYNDVVIRNMIMRTKDAVTEASPMAAAKEERRDDR 113
>gi|29654191|ref|NP_819883.1| 30S ribosomal protein S6 [Coxiella burnetii RSA 493]
gi|161830223|ref|YP_001596843.1| 30S ribosomal protein S6 [Coxiella burnetii RSA 331]
gi|212212683|ref|YP_002303619.1| 30S ribosomal protein S6 [Coxiella burnetii CbuG_Q212]
gi|61215752|sp|Q83D76|RS6_COXBU RecName: Full=30S ribosomal protein S6
gi|189045463|sp|A9ND53|RS6_COXBR RecName: Full=30S ribosomal protein S6
gi|226703446|sp|B6J0J6|RS6_COXB2 RecName: Full=30S ribosomal protein S6
gi|29541457|gb|AAO90397.1| SSU ribosomal protein S6P [Coxiella burnetii RSA 493]
gi|161762090|gb|ABX77732.1| ribosomal protein S6 [Coxiella burnetii RSA 331]
gi|212011093|gb|ACJ18474.1| SSU ribosomal protein S6P [Coxiella burnetii CbuG_Q212]
Length = 127
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D SSQ + + +YQS+I+E G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPDQSSQ-VPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI S I E++ R ++ V+RSL L D +L +Q
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQ 104
>gi|209696172|ref|YP_002264102.1| 30S ribosomal protein S6 [Aliivibrio salmonicida LFI1238]
gi|226703414|sp|B6EMP6|RS6_ALISL RecName: Full=30S ribosomal protein S6
gi|208010125|emb|CAQ80450.1| 30S ribosomal protein S6 [Aliivibrio salmonicida LFI1238]
Length = 126
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ S AAI E++ R ++ VLR++ + + P++ ++
Sbjct: 60 VLMNVESEQAAIDELETAFRYNDAVLRNMIMRTKAAITEPSVMMK 104
>gi|121605294|ref|YP_982623.1| 30S ribosomal protein S6 [Polaromonas naphthalenivorans CJ2]
gi|166227362|sp|A1VPX4|RS6_POLNA RecName: Full=30S ribosomal protein S6
gi|120594263|gb|ABM37702.1| SSU ribosomal protein S6P [Polaromonas naphthalenivorans CJ2]
Length = 121
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG V V + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGTVHRVEDWGRRQLVYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E P+L ++ +R++
Sbjct: 60 LCINIEASQAVMEEIEHAFKFNDAVLRHLTVVKKKAETGPSLMMRNVEREE 110
>gi|302346421|ref|YP_003814719.1| ribosomal protein S6 [Prevotella melaninogenica ATCC 25845]
gi|302150932|gb|ADK97193.1| ribosomal protein S6 [Prevotella melaninogenica ATCC 25845]
Length = 141
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 28 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 87
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I ++ R DE V+R +T+ D + +
Sbjct: 88 ALLEFNAEPTVIDTLETGFRRDEKVIRYITVKQDKYSAA 126
>gi|37520003|ref|NP_923380.1| 30S ribosomal protein S6 [Gloeobacter violaceus PCC 7421]
gi|61215683|sp|Q7NNH7|RS6_GLOVI RecName: Full=30S ribosomal protein S6
gi|35210995|dbj|BAC88375.1| 30S ribosomal protein S6 [Gloeobacter violaceus PCC 7421]
Length = 96
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ + I TI +YQ+L+ E G G R +AY ++K ++ YV M
Sbjct: 5 YETMYILRPDLTDEIIDQTITRYQTLLAEQGAAPVETQHRGKRRLAYELKKFKEGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N +P A+ E+++ R+ E V+R LT+
Sbjct: 65 NYDAPTTAVAELEKAFRLSEEVIRFLTV 92
>gi|315125712|ref|YP_004067715.1| 30S ribosomal protein S6 [Pseudoalteromonas sp. SM9913]
gi|315014226|gb|ADT67564.1| 30S ribosomal protein S6 [Pseudoalteromonas sp. SM9913]
Length = 113
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVM 90
>gi|154706381|ref|YP_001424309.1| 30S ribosomal protein S6 [Coxiella burnetii Dugway 5J108-111]
gi|189045462|sp|A9KFL5|RS6_COXBN RecName: Full=30S ribosomal protein S6
gi|154355667|gb|ABS77129.1| SSU ribosomal protein S6P [Coxiella burnetii Dugway 5J108-111]
Length = 126
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D SSQ + + +YQS+I+E G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPDQSSQ-VPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI S I E++ R ++ V+RSL L D +L +Q
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQ 104
>gi|299140846|ref|ZP_07033984.1| ribosomal protein S6 [Prevotella oris C735]
gi|298577812|gb|EFI49680.1| ribosomal protein S6 [Prevotella oris C735]
Length = 114
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ I+ ++ R DE V+R +T+ +D +
Sbjct: 61 CLIEFKGEPSIINTLETGYRRDEKVIRYMTVRLDKY 96
>gi|295676422|ref|YP_003604946.1| ribosomal protein S6 [Burkholderia sp. CCGE1002]
gi|295436265|gb|ADG15435.1| ribosomal protein S6 [Burkholderia sp. CCGE1002]
Length = 124
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 110
>gi|163749303|ref|ZP_02156552.1| 30S ribosomal protein S6 [Shewanella benthica KT99]
gi|161331022|gb|EDQ01948.1| 30S ribosomal protein S6 [Shewanella benthica KT99]
Length = 140
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG+V + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQVHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + +I E++ R+++ VLRS+ + + E SP + + +RD R
Sbjct: 60 VLMNVETTAESIEELETVFRLNDAVLRSMVMRTKAAITEASPMAKL-KEERDSRRSSEGE 118
Query: 119 DRNVDRKQHVSEEK 132
R+ ++ V E K
Sbjct: 119 RRSAPVEKAVEEVK 132
>gi|229496130|ref|ZP_04389851.1| ribosomal protein S6 [Porphyromonas endodontalis ATCC 35406]
gi|229316961|gb|EEN82873.1| ribosomal protein S6 [Porphyromonas endodontalis ATCC 35406]
Length = 115
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S QQ+K+T+ ++ L++E G E+ VNE G++ +AY I K
Sbjct: 1 MNSYETVFILTPVLSDQQMKETVQKFVDLLKEQGSEI--VNEENWGLKMLAYPIDKKTTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+Y F+ + P+ I +++ R DE VLR LT+
Sbjct: 59 FYQFVEFNAEPSVIKKLEVNFRRDERVLRFLTI 91
>gi|332535619|ref|ZP_08411385.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis ANT/505]
gi|332034974|gb|EGI71496.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis ANT/505]
Length = 113
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVTGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVM 90
>gi|239828696|ref|YP_002951320.1| 30S ribosomal protein S6 [Geobacillus sp. WCH70]
gi|259495336|sp|C5D9X6|RS6_GEOSW RecName: Full=30S ribosomal protein S6
gi|239808989|gb|ACS26054.1| ribosomal protein S6 [Geobacillus sp. WCH70]
Length = 95
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R +Y
Sbjct: 1 MRKYEIMYIIRPNLDDEARQAVVDRFNNILKENGAEITNVTDWGKRRLAYEIKKYRDGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S P A+ E R RI ++++R + +
Sbjct: 61 MILNVVSEPKAVQEFDRLARISDDIIRHIVV 91
>gi|300866122|ref|ZP_07110847.1| 30S ribosomal protein S6 [Oscillatoria sp. PCC 6506]
gi|300335883|emb|CBN56005.1| 30S ribosomal protein S6 [Oscillatoria sp. PCC 6506]
Length = 114
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D+ + + I +YQ+++++ G + G R +AY I+K R Y+
Sbjct: 5 IYETMYILRPDLGEELTEAAIAKYQTILRDQGAQNLETQHRGKRRLAYEIQKQRDGIYIQ 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
MN +P AI ++R MR+ E+V+R LT+ D+
Sbjct: 65 MNYTAPGTAIAILERAMRLSEDVIRYLTIKQDA 97
>gi|312796131|ref|YP_004029053.1| SSU ribosomal protein S6P [Burkholderia rhizoxinica HKI 454]
gi|312167906|emb|CBW74909.1| SSU ribosomal protein S6P [Burkholderia rhizoxinica HKI 454]
Length = 127
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ I +Y+S I +GG++ + + G R +AY I K KA+Y
Sbjct: 3 MRHYEITFIVHPD-QSEQVPAMIEKYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI A + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 62 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 112
>gi|53757419|gb|AAU91710.1| ribosomal protein S6 [Methylococcus capsulatus str. Bath]
Length = 128
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S Q+ I +Y+S+I+ G + + + G R +AY I K KA+YV MNI A + E+
Sbjct: 7 SGQVPAMIERYRSIIEGAAGRIHRLEDWGRRQLAYPIAKLHKAHYVLMNIECDQATLEEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ R ++ VLRSLT+ D P+ + R D DR P D
Sbjct: 67 ESGFRFNDAVLRSLTIRRDEAVTEPS-ALARSGSDAEADRAPADEG 111
>gi|307546116|ref|YP_003898595.1| 30S ribosomal protein S6 [Halomonas elongata DSM 2581]
gi|307218140|emb|CBV43410.1| 30S ribosomal protein S6 [Halomonas elongata DSM 2581]
Length = 123
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y ++ ENGG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMVERYTGIVTENGGTVHRLEDWGRRHMAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + E++ R ++ ++RSL + E SP + D+ R D PR
Sbjct: 60 VLMNVECSGETLEEIENIFRFNDAIIRSLVVRCKEAITEASPMMK-PAEDKRARRDEKPR 118
>gi|317402863|gb|EFV83405.1| 30S ribosomal protein S6 [Achromobacter xylosoxidans C54]
Length = 124
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIV-HPAQSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI A + E++ R ++ VLR L + + +P++ ++ +R++
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTAPSIMMKSVEREE 110
>gi|281420809|ref|ZP_06251808.1| ribosomal protein S6 [Prevotella copri DSM 18205]
gi|281405101|gb|EFB35781.1| ribosomal protein S6 [Prevotella copri DSM 18205]
Length = 114
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ ++ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFEKVLTDNGAEILNKEAWGLKKLAYNIEKKTSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I +++ R DE V+R +T+ +D + +
Sbjct: 61 SLVEFKAEPTVIAKLETAYRRDEKVIRYMTVKLDKYAAA 99
>gi|56751494|ref|YP_172195.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 6301]
gi|61216125|sp|Q5N1Z5|RS6_SYNP6 RecName: Full=30S ribosomal protein S6
gi|56686453|dbj|BAD79675.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 6301]
Length = 107
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++LR D++ +Q++ I +YQ+ + E G EV+ G R +AY I K R+ YV +
Sbjct: 6 YETTYILRADLTEEQVEQAIAKYQTPLTEAGAEVQDTQHRGKRRLAYLINKQREGIYVQI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + I ++R +R+ E VLR LT+
Sbjct: 66 NYTGDGSQIAPLERALRLSEEVLRFLTV 93
>gi|291297663|ref|YP_003508941.1| 30S ribosomal protein S6 [Stackebrandtia nassauensis DSM 44728]
gi|290566883|gb|ADD39848.1| ribosomal protein S6 [Stackebrandtia nassauensis DSM 44728]
Length = 96
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ +Q+ ++ + +I E GG V ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERQVTPSLENFLKVISEAGGAVENLDIWGRRRLAYEINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ S PAA+ EM+R+MR++E+++R+ L
Sbjct: 61 AVANLQSEPAAVAEMERQMRLNESIMRTKVL 91
>gi|152973066|ref|YP_001338212.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238892680|ref|YP_002917414.1| 30S ribosomal protein S6 [Klebsiella pneumoniae NTUH-K2044]
gi|262045372|ref|ZP_06018396.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330003413|ref|ZP_08304611.1| ribosomal protein S6 [Klebsiella sp. MS 92-3]
gi|166226974|sp|A6THB1|RS6_KLEP7 RecName: Full=30S ribosomal protein S6
gi|150957915|gb|ABR79945.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238544996|dbj|BAH61347.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259037290|gb|EEW38537.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536973|gb|EGF63266.1| ribosomal protein S6 [Klebsiella sp. MS 92-3]
Length = 131
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P AI E++ R ++ V+RS+ + E SP + + R+ R D F
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDSEAGDSEE 131
>gi|27364781|ref|NP_760309.1| 30S ribosomal protein S6 [Vibrio vulnificus CMCP6]
gi|161486597|ref|NP_935777.2| 30S ribosomal protein S6 [Vibrio vulnificus YJ016]
gi|320155175|ref|YP_004187554.1| 30S ribosomal protein S6p [Vibrio vulnificus MO6-24/O]
gi|31340389|sp|Q8DCL6|RS6_VIBVU RecName: Full=30S ribosomal protein S6
gi|61216263|sp|Q7MH88|RS6_VIBVY RecName: Full=30S ribosomal protein S6
gi|27360926|gb|AAO09836.1| ribosomal protein S6 [Vibrio vulnificus CMCP6]
gi|319930487|gb|ADV85351.1| SSU ribosomal protein S6p [Vibrio vulnificus MO6-24/O]
Length = 123
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + A I E++ R ++ VLR++ + + P++ +++ + +R PR
Sbjct: 60 VLMNVEADQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSIMLKQ-----KEERAPR 112
>gi|149191591|ref|ZP_01869836.1| 30S ribosomal protein S6 [Vibrio shilonii AK1]
gi|148834549|gb|EDL51541.1| 30S ribosomal protein S6 [Vibrio shilonii AK1]
Length = 126
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEANGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V MN+ +P AI E++ R ++ VLR++ + + P++ +++
Sbjct: 60 VLMNVEAPQEAIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKQ 105
>gi|257461421|ref|ZP_05626517.1| 30S ribosomal protein S6 [Campylobacter gracilis RM3268]
gi|257441144|gb|EEV16291.1| 30S ribosomal protein S6 [Campylobacter gracilis RM3268]
Length = 137
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MRNYEVLFIVKPTLTDDEVKTKVDFVKEIITKNGGEIASVIEMGARKLAYKIDKYERGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + P+ I E+ R +RI E+++R LT+
Sbjct: 61 FVIYFKAEPSLISELVRNLRITEDIIRFLTV 91
>gi|240948274|ref|ZP_04752660.1| 30S ribosomal protein S6 [Actinobacillus minor NM305]
gi|240297313|gb|EER47854.1| 30S ribosomal protein S6 [Actinobacillus minor NM305]
Length = 122
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASIKDAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P + I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIV 90
>gi|304405907|ref|ZP_07387565.1| ribosomal protein S6 [Paenibacillus curdlanolyticus YK9]
gi|304345150|gb|EFM10986.1| ribosomal protein S6 [Paenibacillus curdlanolyticus YK9]
Length = 95
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ + ++ + ++ +I GGEV + +G R +AY I K R Y
Sbjct: 1 MRKYEVMYILRSDVEQEAVQAIVEKFNGIITNGGGEVSKTDIIGKRRLAYEINKQRDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ ++P I E+ R M+I + V R+L +
Sbjct: 61 VLVHFSAPAEVIVELDRVMKIADEVFRTLIV 91
>gi|257465545|ref|ZP_05629916.1| 30S ribosomal protein S6 [Actinobacillus minor 202]
gi|257451205|gb|EEV25248.1| 30S ribosomal protein S6 [Actinobacillus minor 202]
Length = 123
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASIKDAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P + I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIV 90
>gi|308071627|ref|YP_003873232.1| 30S ribosomal protein S6 [Paenibacillus polymyxa E681]
gi|305860906|gb|ADM72694.1| 30S ribosomal protein S6 [Paenibacillus polymyxa E681]
Length = 94
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ T+ ++Q +I GGE+ +++ R +AY I+K R +
Sbjct: 1 MRKYEAMYIIRPDIEQEAVQATVDKFQGIISNGGGEIT-SHDVTKRRLAYEIKKFRDGSF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N + PA + E++R M+I + V+R L
Sbjct: 60 VLVNFTAEPAVVTELERIMKISDEVIRYL 88
>gi|37199919|dbj|BAC95748.1| ribosomal protein S6 [Vibrio vulnificus YJ016]
Length = 134
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 12 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 70
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + A I E++ R ++ VLR++ + + P++ +++ + +R PR
Sbjct: 71 VLMNVEADQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSIMLKQ-----KEERAPR 123
>gi|167562479|ref|ZP_02355395.1| 30S ribosomal protein S6 [Burkholderia oklahomensis EO147]
gi|167569663|ref|ZP_02362537.1| 30S ribosomal protein S6 [Burkholderia oklahomensis C6786]
Length = 124
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAESGPS 100
>gi|212633589|ref|YP_002310114.1| 30S ribosomal protein S6 [Shewanella piezotolerans WP3]
gi|226695131|sp|B8CIQ1|RS6_SHEPW RecName: Full=30S ribosomal protein S6
gi|212555073|gb|ACJ27527.1| Ribosomal protein S6 [Shewanella piezotolerans WP3]
Length = 137
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR---NDR 115
V MN+ + ++ E++ R ++ VLRS+ + + E SP + + +RD R +R
Sbjct: 60 VLMNVETTAESVEELETAFRFNDAVLRSMVMRTKAAITEASP-MAKAKDERDTRRSSEER 118
Query: 116 FPRDRNVDRKQHVSE 130
PR + + +E
Sbjct: 119 APRAEATEEVKESAE 133
>gi|186475676|ref|YP_001857146.1| 30S ribosomal protein S6 [Burkholderia phymatum STM815]
gi|226703434|sp|B2JG18|RS6_BURP8 RecName: Full=30S ribosomal protein S6
gi|184192135|gb|ACC70100.1| ribosomal protein S6 [Burkholderia phymatum STM815]
Length = 124
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI A + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|260592154|ref|ZP_05857612.1| ribosomal protein S6 [Prevotella veroralis F0319]
gi|260535788|gb|EEX18405.1| ribosomal protein S6 [Prevotella veroralis F0319]
Length = 114
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+ + ++++L+ +NG E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKTLLTDNGAEI--LNEEIWGLKKLAYNIQKKSSG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+Y + + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 59 FYALLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|300311390|ref|YP_003775482.1| 30S ribosomal protein S6 [Herbaspirillum seropedicae SmR1]
gi|124483538|emb|CAM32642.1| 30S ribosomal subunit protein S6 [Herbaspirillum seropedicae]
gi|300074175|gb|ADJ63574.1| 30S ribosomal subunit S6 protein [Herbaspirillum seropedicae SmR1]
Length = 121
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG+V V + G R +AY+I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR LT+ + E P+ ++ ++D
Sbjct: 60 VCLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKED 110
>gi|15603045|ref|NP_246117.1| 30S ribosomal protein S6 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13959508|sp|Q9CLN8|RS6_PASMU RecName: Full=30S ribosomal protein S6
gi|12721531|gb|AAK03264.1| RpS6 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 125
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVII 90
>gi|325144537|gb|EGC66836.1| ribosomal protein S6 [Neisseria meningitidis M01-240013]
Length = 122
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + P + E++ R ++ VLR L +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLAI 90
>gi|260885357|ref|ZP_05734878.2| ribosomal protein S6 [Prevotella tannerae ATCC 51259]
gi|260852777|gb|EEX72646.1| ribosomal protein S6 [Prevotella tannerae ATCC 51259]
Length = 114
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QQ+K+T+ +++ ++ G E+ E G++ +AY I+K +Y
Sbjct: 2 MNQYETVFILTPVLSDQQMKETVEKFKDVLTAEGAEIINEEEWGLKHLAYPIQKKSTGFY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V + + P I +++ R DE V+R LT +D +
Sbjct: 62 VLIEFKAEPTVIKKLEVAYRRDERVIRDLTTKLDKY 97
>gi|301062690|ref|ZP_07203308.1| ribosomal protein S6 [delta proteobacterium NaphS2]
gi|300443213|gb|EFK07360.1| ribosomal protein S6 [delta proteobacterium NaphS2]
Length = 137
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ +++ + + + ++ ++++NGG V V+E G +T+AY I+K K +Y
Sbjct: 1 MRYYETLYIINPNLADEDYRAVVAKFTDVVEKNGGVVTKVDEWGKKTLAYDIKKFDKGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E+KR++ +D+ VL+ T+
Sbjct: 61 VLLQFCGEAGLTAELKRELGLDDRVLKYQTI 91
>gi|126208639|ref|YP_001053864.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae L20]
gi|166226794|sp|A3N1H3|RS6_ACTP2 RecName: Full=30S ribosomal protein S6
gi|126097431|gb|ABN74259.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 124
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPQRVIDELETNFRYNDAVLRNLIV 90
>gi|170733233|ref|YP_001765180.1| 30S ribosomal protein S6 [Burkholderia cenocepacia MC0-3]
gi|206560309|ref|YP_002231073.1| 30S ribosomal protein S6 [Burkholderia cenocepacia J2315]
gi|226703431|sp|B1JTF3|RS6_BURCC RecName: Full=30S ribosomal protein S6
gi|226703432|sp|B4EBH3|RS6_BURCJ RecName: Full=30S ribosomal protein S6
gi|169816475|gb|ACA91058.1| ribosomal protein S6 [Burkholderia cenocepacia MC0-3]
gi|198036350|emb|CAR52246.1| 30S ribosomal protein S6 [Burkholderia cenocepacia J2315]
Length = 124
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|224373385|ref|YP_002607757.1| ribosomal protein S6 [Nautilia profundicola AmH]
gi|223588759|gb|ACM92495.1| ribosomal protein S6 [Nautilia profundicola AmH]
Length = 111
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 59/88 (67%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+L+ ++ ++ + Q++I+ENGGEV ++++G+R +AY I K + Y +
Sbjct: 6 YETMFILKPTLTDEERAKNVENIQNVIKENGGEVAALDKIGVRELAYPIAKFERGDYYIV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+P +A+ E++R+MR +E++LR +T+
Sbjct: 66 YYKAPASAVLELERQMRYNEDLLRFMTV 93
>gi|91783363|ref|YP_558569.1| 30S ribosomal protein S6 [Burkholderia xenovorans LB400]
gi|170692292|ref|ZP_02883455.1| ribosomal protein S6 [Burkholderia graminis C4D1M]
gi|187923776|ref|YP_001895418.1| 30S ribosomal protein S6 [Burkholderia phytofirmans PsJN]
gi|296157724|ref|ZP_06840558.1| ribosomal protein S6 [Burkholderia sp. Ch1-1]
gi|307729537|ref|YP_003906761.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1003]
gi|323526191|ref|YP_004228344.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1001]
gi|122970480|sp|Q13ZH2|RS6_BURXL RecName: Full=30S ribosomal protein S6
gi|226703435|sp|B2T3N3|RS6_BURPP RecName: Full=30S ribosomal protein S6
gi|91687317|gb|ABE30517.1| SSU ribosomal protein S6P [Burkholderia xenovorans LB400]
gi|170142722|gb|EDT10887.1| ribosomal protein S6 [Burkholderia graminis C4D1M]
gi|187714970|gb|ACD16194.1| ribosomal protein S6 [Burkholderia phytofirmans PsJN]
gi|295891970|gb|EFG71754.1| ribosomal protein S6 [Burkholderia sp. Ch1-1]
gi|307584072|gb|ADN57470.1| ribosomal protein S6 [Burkholderia sp. CCGE1003]
gi|323383193|gb|ADX55284.1| ribosomal protein S6 [Burkholderia sp. CCGE1001]
Length = 124
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 110
>gi|260911680|ref|ZP_05918260.1| 30S ribosomal protein S6 [Prevotella sp. oral taxon 472 str.
F0295]
gi|260634228|gb|EEX52338.1| 30S ribosomal protein S6 [Prevotella sp. oral taxon 472 str.
F0295]
Length = 115
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T+ +++ L+ + G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDKGAEI--VNEEAWGLKKMAYAIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I ++ R DE V+R +T+ +D +
Sbjct: 59 FYCLLEFKAEPEVIKSLETGYRRDEKVIRHMTVKLDKY 96
>gi|331268204|ref|YP_004394696.1| 30S ribosomal protein S6 [Clostridium botulinum BKT015925]
gi|329124754|gb|AEB74699.1| ribosomal protein S6 [Clostridium botulinum BKT015925]
Length = 95
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + + IK TI +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILQTSLEEEAIKATIEKFKGVIENEGGVVENVDEWGKRKLAYPINKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E++R RI + V+R + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVV 91
>gi|317503267|ref|ZP_07961322.1| 30S ribosomal protein S6 [Prevotella salivae DSM 15606]
gi|315665624|gb|EFV05236.1| 30S ribosomal protein S6 [Prevotella salivae DSM 15606]
Length = 114
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ +NE G++ +AY I K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRNLLTDNGAEI--LNEEIWGLKKMAYAIEKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + P+ ++ ++ R DE V+R +T+ +D +
Sbjct: 59 FYCLVEFKGEPSIVNTLETGFRRDEKVIRYMTVRLDKY 96
>gi|53719094|ref|YP_108080.1| 30S ribosomal protein S6 [Burkholderia pseudomallei K96243]
gi|53723581|ref|YP_103060.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 23344]
gi|67640204|ref|ZP_00439019.1| 30S ribosomal protein S6 [Burkholderia mallei GB8 horse 4]
gi|76810465|ref|YP_333811.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710b]
gi|83721320|ref|YP_442700.1| 30S ribosomal protein S6 [Burkholderia thailandensis E264]
gi|121600145|ref|YP_993214.1| 30S ribosomal protein S6 [Burkholderia mallei SAVP1]
gi|124386277|ref|YP_001026011.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10229]
gi|126440551|ref|YP_001059287.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 668]
gi|126450631|ref|YP_001080722.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10247]
gi|126453081|ref|YP_001066555.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106a]
gi|134277876|ref|ZP_01764591.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 305]
gi|167581639|ref|ZP_02374513.1| 30S ribosomal protein S6 [Burkholderia thailandensis TXDOH]
gi|167619759|ref|ZP_02388390.1| 30S ribosomal protein S6 [Burkholderia thailandensis Bt4]
gi|167719190|ref|ZP_02402426.1| 30S ribosomal protein S6 [Burkholderia pseudomallei DM98]
gi|167738192|ref|ZP_02410966.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 14]
gi|167815381|ref|ZP_02447061.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 91]
gi|167823789|ref|ZP_02455260.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 9]
gi|167845332|ref|ZP_02470840.1| 30S ribosomal protein S6 [Burkholderia pseudomallei B7210]
gi|167893874|ref|ZP_02481276.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 7894]
gi|167902328|ref|ZP_02489533.1| 30S ribosomal protein S6 [Burkholderia pseudomallei NCTC 13177]
gi|167910566|ref|ZP_02497657.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 112]
gi|167918592|ref|ZP_02505683.1| 30S ribosomal protein S6 [Burkholderia pseudomallei BCC215]
gi|217421378|ref|ZP_03452882.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 576]
gi|226197319|ref|ZP_03792896.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pakistan 9]
gi|237812613|ref|YP_002897064.1| ribosomal protein S6 [Burkholderia pseudomallei MSHR346]
gi|242314479|ref|ZP_04813495.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106b]
gi|254178587|ref|ZP_04885242.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 10399]
gi|254179490|ref|ZP_04886089.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1655]
gi|254189118|ref|ZP_04895629.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pasteur 52237]
gi|254197983|ref|ZP_04904405.1| 30S ribosomal protein S6 [Burkholderia pseudomallei S13]
gi|254200006|ref|ZP_04906372.1| 30S ribosomal protein S6 [Burkholderia mallei FMH]
gi|254206339|ref|ZP_04912691.1| 30S ribosomal protein S6 [Burkholderia mallei JHU]
gi|254258001|ref|ZP_04949055.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710a]
gi|254297372|ref|ZP_04964825.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 406e]
gi|254358246|ref|ZP_04974519.1| 30S ribosomal protein S6 [Burkholderia mallei 2002721280]
gi|257138912|ref|ZP_05587174.1| 30S ribosomal protein S6 [Burkholderia thailandensis E264]
gi|61215454|sp|Q62JQ9|RS6_BURMA RecName: Full=30S ribosomal protein S6
gi|61215467|sp|Q63UY6|RS6_BURPS RecName: Full=30S ribosomal protein S6
gi|91207904|sp|Q3JRJ2|RS6_BURP1 RecName: Full=30S ribosomal protein S6
gi|123536854|sp|Q2SWJ9|RS6_BURTA RecName: Full=30S ribosomal protein S6
gi|166226807|sp|A3MKD6|RS6_BURM7 RecName: Full=30S ribosomal protein S6
gi|166226808|sp|A2S242|RS6_BURM9 RecName: Full=30S ribosomal protein S6
gi|166226809|sp|A1V4R1|RS6_BURMS RecName: Full=30S ribosomal protein S6
gi|166226810|sp|A3NW34|RS6_BURP0 RecName: Full=30S ribosomal protein S6
gi|166226811|sp|A3NAB6|RS6_BURP6 RecName: Full=30S ribosomal protein S6
gi|52209508|emb|CAH35460.1| putative 30S ribosomal protein S6 [Burkholderia pseudomallei
K96243]
gi|52427004|gb|AAU47597.1| ribosomal protein S6 [Burkholderia mallei ATCC 23344]
gi|76579918|gb|ABA49393.1| ribosomal protein S6 [Burkholderia pseudomallei 1710b]
gi|83655145|gb|ABC39208.1| ribosomal protein S6 [Burkholderia thailandensis E264]
gi|121228955|gb|ABM51473.1| 30S ribosomal protein S6 [Burkholderia mallei SAVP1]
gi|124294297|gb|ABN03566.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10229]
gi|126220044|gb|ABN83550.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 668]
gi|126226723|gb|ABN90263.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106a]
gi|126243501|gb|ABO06594.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10247]
gi|134251526|gb|EBA51605.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 305]
gi|147749602|gb|EDK56676.1| 30S ribosomal protein S6 [Burkholderia mallei FMH]
gi|147753782|gb|EDK60847.1| 30S ribosomal protein S6 [Burkholderia mallei JHU]
gi|148027373|gb|EDK85394.1| 30S ribosomal protein S6 [Burkholderia mallei 2002721280]
gi|157807511|gb|EDO84681.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 406e]
gi|157936797|gb|EDO92467.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pasteur 52237]
gi|160699626|gb|EDP89596.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 10399]
gi|169654724|gb|EDS87417.1| 30S ribosomal protein S6 [Burkholderia pseudomallei S13]
gi|184210030|gb|EDU07073.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1655]
gi|217395120|gb|EEC35138.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 576]
gi|225930698|gb|EEH26708.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pakistan 9]
gi|237503908|gb|ACQ96226.1| ribosomal protein S6 [Burkholderia pseudomallei MSHR346]
gi|238520890|gb|EEP84346.1| 30S ribosomal protein S6 [Burkholderia mallei GB8 horse 4]
gi|242137718|gb|EES24120.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106b]
gi|254216690|gb|EET06074.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710a]
Length = 124
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|124266719|ref|YP_001020723.1| 30S ribosomal protein S6 [Methylibium petroleiphilum PM1]
gi|166227339|sp|A2SFZ9|RS6_METPP RecName: Full=30S ribosomal protein S6
gi|124259494|gb|ABM94488.1| SSU ribosomal protein S6P [Methylibium petroleiphilum PM1]
Length = 122
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ L+ GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGLVTAAGGKVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + E++ + ++ VLR LT++ E +P++ ++ +R++
Sbjct: 60 LCLNIECSKETLLELETGFKFNDAVLRHLTVVKSKAETAPSIMMKAVEREE 110
>gi|281424415|ref|ZP_06255328.1| ribosomal protein S6 [Prevotella oris F0302]
gi|281401684|gb|EFB32515.1| ribosomal protein S6 [Prevotella oris F0302]
Length = 114
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ ++ ++ R DE V+R +T+ +D +
Sbjct: 61 CLIEFKGEPSIVNTLETGYRRDEKVIRYMTVRLDKY 96
>gi|303235712|ref|ZP_07322319.1| ribosomal protein S6 [Prevotella disiens FB035-09AN]
gi|302484159|gb|EFL47147.1| ribosomal protein S6 [Prevotella disiens FB035-09AN]
Length = 114
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+ + ++++L+ +NG E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKTLLTDNGAEI--LNEELWGLKKLAYNIQKKSSG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+Y + + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 59 FYAMLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|261880413|ref|ZP_06006840.1| 30S ribosomal protein S6 [Prevotella bergensis DSM 17361]
gi|270332882|gb|EFA43668.1| 30S ribosomal protein S6 [Prevotella bergensis DSM 17361]
Length = 114
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ + +++ R DE V+R +T+ ++ + +
Sbjct: 61 CLLEFKAEPSVVDKLETGYRRDEKVIRFMTVKLEKYAAA 99
>gi|290473409|ref|YP_003466275.1| 30S ribosomal subunit protein S6 [Xenorhabdus bovienii SS-2004]
gi|289172708|emb|CBJ79479.1| 30S ribosomal subunit protein S6 [Xenorhabdus bovienii SS-2004]
Length = 132
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +N+ +P AI E++ R ++ V+RS+ + V P+ ++ D
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEPSPMVKAKD 107
>gi|113971592|ref|YP_735385.1| 30S ribosomal protein S6 [Shewanella sp. MR-4]
gi|114046196|ref|YP_736746.1| 30S ribosomal protein S6 [Shewanella sp. MR-7]
gi|123131744|sp|Q0HYW6|RS6_SHESR RecName: Full=30S ribosomal protein S6
gi|123324698|sp|Q0HF39|RS6_SHESM RecName: Full=30S ribosomal protein S6
gi|113886276|gb|ABI40328.1| SSU ribosomal protein S6P [Shewanella sp. MR-4]
gi|113887638|gb|ABI41689.1| SSU ribosomal protein S6P [Shewanella sp. MR-7]
Length = 131
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL--LVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ VLR++ + V E SP + + +RD R R P
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP-MAKAKDERDSR--RGPA 116
Query: 119 -DRNVD 123
DR+ D
Sbjct: 117 GDRSYD 122
>gi|94263202|ref|ZP_01287019.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|94270366|ref|ZP_01291724.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|93450832|gb|EAT01865.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|93456420|gb|EAT06540.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
Length = 126
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 1 MKLYEHVFLLRQDISSQ-QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M+ YE V ++R +++ +I +Y ++I E GEV VN G++ +AY ++K + +
Sbjct: 1 MRKYESVIIVRPGAAAEAEITAVSDKYAAVISEYQGEVASVNHWGLKRLAYPVKKENQGF 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQSPTLTIQRHDRDDR 112
Y+ + P I EM+R +RID+ +L+ LT+ L D + S +T D+ D+
Sbjct: 61 YLLLRYLCNPDGIKEMERLLRIDDRILKFLTVRLDDDLDISGAVTAADGDQADQ 114
>gi|120600214|ref|YP_964788.1| 30S ribosomal protein S6 [Shewanella sp. W3-18-1]
gi|146291858|ref|YP_001182282.1| 30S ribosomal protein S6 [Shewanella putrefaciens CN-32]
gi|166227384|sp|A4Y3F0|RS6_SHEPC RecName: Full=30S ribosomal protein S6
gi|166227386|sp|A1RNI9|RS6_SHESW RecName: Full=30S ribosomal protein S6
gi|120560307|gb|ABM26234.1| SSU ribosomal protein S6P [Shewanella sp. W3-18-1]
gi|145563548|gb|ABP74483.1| SSU ribosomal protein S6P [Shewanella putrefaciens CN-32]
gi|319425092|gb|ADV53166.1| ribosomal protein S6 [Shewanella putrefaciens 200]
Length = 131
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL--LVDSHEQSPTLTIQRHDRDDR 112
V MN+ +P I E++ R ++ VLR++ + V E SP + R +RD R
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP-MARARDERDSR 112
>gi|319792757|ref|YP_004154397.1| ribosomal protein s6 [Variovorax paradoxus EPS]
gi|315595220|gb|ADU36286.1| ribosomal protein S6 [Variovorax paradoxus EPS]
Length = 124
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ LI GG+V V + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGLITAGGGKVHRVEDWGRRQLAYQINKLNKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEAEQAVMGELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|77361359|ref|YP_340934.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis TAC125]
gi|91207933|sp|Q3IIA2|RS6_PSEHT RecName: Full=30S ribosomal protein S6
gi|76876270|emb|CAI87492.1| 30S ribosomal subunit protein S6 [Pseudoalteromonas haloplanktis
TAC125]
Length = 113
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVTGMIERYTGSITEAGGVIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR+L +
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVM 90
>gi|226326634|ref|ZP_03802152.1| hypothetical protein PROPEN_00484 [Proteus penneri ATCC 35198]
gi|225204855|gb|EEG87209.1| hypothetical protein PROPEN_00484 [Proteus penneri ATCC 35198]
Length = 132
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYKTAITNANGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ VLR++ + E SP + + R D D
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVLRNMIMRTKHAVTEASPMVKAKDERRRDIADDLDG 119
Query: 119 DRNVDRKQHVSEE 131
+ VD SEE
Sbjct: 120 EEEVDDVAEDSEE 132
>gi|92113016|ref|YP_572944.1| SSU ribosomal protein S6P [Chromohalobacter salexigens DSM 3043]
gi|122420514|sp|Q1QZ63|RS6_CHRSD RecName: Full=30S ribosomal protein S6
gi|91796106|gb|ABE58245.1| SSU ribosomal protein S6P [Chromohalobacter salexigens DSM 3043]
Length = 135
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y L+ ENGG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMVERYTGLVTENGGTVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + E++ R ++ ++RSL +
Sbjct: 60 VLMNIECSGETLDEIENIFRFNDAIIRSLVV 90
>gi|254480819|ref|ZP_05094065.1| ribosomal protein S6, putative [marine gamma proteobacterium
HTCC2148]
gi|214038614|gb|EEB79275.1| ribosomal protein S6, putative [marine gamma proteobacterium
HTCC2148]
Length = 148
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + IQ++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATIQKDGGSVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A+ E+ R ++ V+R+L +
Sbjct: 60 VLMNVEASNEALDELTTTFRFNDAVIRNLVI 90
>gi|261342857|ref|ZP_05970715.1| ribosomal protein S6 [Enterobacter cancerogenus ATCC 35316]
gi|288314900|gb|EFC53838.1| ribosomal protein S6 [Enterobacter cancerogenus ATCC 35316]
Length = 131
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P AI E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDSDAGDSEE 131
>gi|330817225|ref|YP_004360930.1| 30S ribosomal protein S6 [Burkholderia gladioli BSR3]
gi|327369618|gb|AEA60974.1| 30S ribosomal protein S6 [Burkholderia gladioli BSR3]
Length = 124
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITTRGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V +NI A + E++ + ++ VLR L + + E P+
Sbjct: 60 VCLNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|183600322|ref|ZP_02961815.1| hypothetical protein PROSTU_03884 [Providencia stuartii ATCC
25827]
gi|188020112|gb|EDU58152.1| hypothetical protein PROSTU_03884 [Providencia stuartii ATCC
25827]
Length = 131
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V MN+ +P AI E++ R ++ V+RS+ + V
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRV 92
>gi|170718757|ref|YP_001783942.1| 30S ribosomal protein S6 [Haemophilus somnus 2336]
gi|189045472|sp|B0US43|RS6_HAES2 RecName: Full=30S ribosomal protein S6
gi|168826886|gb|ACA32257.1| ribosomal protein S6 [Haemophilus somnus 2336]
Length = 125
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVII 90
>gi|52424524|ref|YP_087661.1| 30S ribosomal protein S6 [Mannheimia succiniciproducens MBEL55E]
gi|61215479|sp|Q65VD4|RS6_MANSM RecName: Full=30S ribosomal protein S6
gi|52306576|gb|AAU37076.1| RpsF protein [Mannheimia succiniciproducens MBEL55E]
Length = 125
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVII 90
>gi|188535073|ref|YP_001908870.1| 30S ribosomal protein S6 [Erwinia tasmaniensis Et1/99]
gi|292489608|ref|YP_003532498.1| 30S ribosomal protein S6 [Erwinia amylovora CFBP1430]
gi|292898171|ref|YP_003537540.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC 49946]
gi|226703466|sp|B2VCW1|RS6_ERWT9 RecName: Full=30S ribosomal protein S6
gi|188030115|emb|CAO98001.1| 30S ribosomal protein S6 [Erwinia tasmaniensis Et1/99]
gi|291198019|emb|CBJ45122.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC 49946]
gi|291555045|emb|CBA23118.1| 30S ribosomal protein S6 [Erwinia amylovora CFBP1430]
gi|310765320|gb|ADP10270.1| 30S ribosomal protein S6 [Erwinia sp. Ejp617]
gi|312173785|emb|CBX82039.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC BAA-2158]
Length = 131
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ + D SEE
Sbjct: 119 ETSDDADAGDSEE 131
>gi|261885713|ref|ZP_06009752.1| 30S ribosomal protein S6 [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 131
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ + K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYELLFILKPTLTEDEAKVKVDFIKEVITKNGGEIASVIEMGTRKLAYKIDKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + +P I E+ R +RI E ++R LT+
Sbjct: 61 VVIYFMAPTQLIAELVRNVRITEEIIRFLTV 91
>gi|77163755|ref|YP_342280.1| ribosomal protein S6 [Nitrosococcus oceani ATCC 19707]
gi|254435448|ref|ZP_05048955.1| ribosomal protein S6, putative [Nitrosococcus oceani AFC27]
gi|91207924|sp|Q3JEJ6|RS6_NITOC RecName: Full=30S ribosomal protein S6
gi|76882069|gb|ABA56750.1| SSU ribosomal protein S6P [Nitrosococcus oceani ATCC 19707]
gi|207088559|gb|EDZ65831.1| ribosomal protein S6, putative [Nitrosococcus oceani AFC27]
Length = 156
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQLSAMMDRYRQIIETDGGCIHRLEDWGRRQLAYPIQKLYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI P I E+ R ++ VLR + +
Sbjct: 60 VLMNIECTPRTIEELTSAFRFNDAVLRDMVI 90
>gi|331007840|ref|ZP_08330939.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC1989]
gi|330418357|gb|EGG92924.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC1989]
Length = 144
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y + I E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVAGMVERYTASINEEGGQVHRLEDWGRRHLAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
+ MN+ ++E+ R ++ VLR + + D E+SP +
Sbjct: 60 ILMNVECSDTVLNELTTTFRYNDAVLRHMVIRTDEAVVEESPIM 103
>gi|118474517|ref|YP_892289.1| 30S ribosomal protein S6 [Campylobacter fetus subsp. fetus 82-40]
gi|166226815|sp|A0RQ06|RS6_CAMFF RecName: Full=30S ribosomal protein S6
gi|118413743|gb|ABK82163.1| ribosomal protein S6 [Campylobacter fetus subsp. fetus 82-40]
Length = 128
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ + K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYELLFILKPTLTEDEAKVKVDFIKEVITKNGGEIASVIEMGTRKLAYKIDKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + +P I E+ R +RI E ++R LT+
Sbjct: 61 VVIYFMAPTQLIAELVRNVRITEEIIRFLTV 91
>gi|333007701|gb|EGK27178.1| ribosomal protein S6 [Shigella flexneri VA-6]
Length = 131
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MNI +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNIEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|253681311|ref|ZP_04862109.1| ribosomal protein S6 [Clostridium botulinum D str. 1873]
gi|253562549|gb|EES92000.1| ribosomal protein S6 [Clostridium botulinum D str. 1873]
Length = 95
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + + IK TI +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILQPSLEEEVIKATIEKFKGVIENEGGVVENVDEWGKRKLAYPINKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E++R RI + V+R + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVV 91
>gi|319787276|ref|YP_004146751.1| ribosomal protein S6 [Pseudoxanthomonas suwonensis 11-1]
gi|317465788|gb|ADV27520.1| ribosomal protein S6 [Pseudoxanthomonas suwonensis 11-1]
Length = 143
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ GG + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYKGLIENAGGSIHRLEDWGRRQLAYPIQNLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
V N AAI E+ R ++ +LR L + D E +L ++ +D++ D+
Sbjct: 60 VLFNAEVTQAAIDELVETFRFNDAILRHLVIRRDGPETEQSLIMK--SKDEKGDK 112
>gi|302036160|ref|YP_003796482.1| 30S ribosomal protein S6 [Candidatus Nitrospira defluvii]
gi|300604224|emb|CBK40556.1| 30S ribosomal protein S6 [Candidatus Nitrospira defluvii]
Length = 117
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE +F++R +S ++ I + + + +NG + G + +AY I++ RK Y
Sbjct: 1 MELYESLFIIRPTLSDEETTALIEKMKGTVTKNGASLERAENWGRKKLAYEIKRERKGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
V+ P A I E++R R+++++++ LT+ ++ P
Sbjct: 61 VYFYFKGPGAVIAELERAYRLEDSIIKFLTVKLEQEPAPP 100
>gi|157373896|ref|YP_001472496.1| 30S ribosomal protein S6 [Shewanella sediminis HAW-EB3]
gi|189045587|sp|A8FR95|RS6_SHESH RecName: Full=30S ribosomal protein S6
gi|157316270|gb|ABV35368.1| ribosomal protein S6 [Shewanella sediminis HAW-EB3]
Length = 139
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG+V + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQVHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR 112
V MN+ + ++ E++ R ++ VLRS+ + + E SP + + +RD R
Sbjct: 60 VLMNVEASAESVEELETAFRFNDAVLRSMVMRTKAAITEASP-MAKAKDERDSR 112
>gi|152978439|ref|YP_001344068.1| 30S ribosomal protein S6 [Actinobacillus succinogenes 130Z]
gi|189045452|sp|A6VMD6|RS6_ACTSZ RecName: Full=30S ribosomal protein S6
gi|150840162|gb|ABR74133.1| ribosomal protein S6 [Actinobacillus succinogenes 130Z]
Length = 126
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVII 90
>gi|117925751|ref|YP_866368.1| 30S ribosomal protein S6P [Magnetococcus sp. MC-1]
gi|167011247|sp|A0LAG9|RS6_MAGSM RecName: Full=30S ribosomal protein S6
gi|117609507|gb|ABK44962.1| SSU ribosomal protein S6P [Magnetococcus sp. MC-1]
Length = 144
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR D++++Q++ ++ + GG+V G R +AY ++KN K +Y
Sbjct: 1 MAFYESIYILRADLTTEQVELVNKRFSDNVAATGGKVVRTELWGRRQLAYLVKKNVKGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
VF + + +H+++ K+ IDE+VL+
Sbjct: 61 VFHILEGEGSMVHDLEAKLGIDEDVLK 87
>gi|330995928|ref|ZP_08319823.1| ribosomal protein S6 [Paraprevotella xylaniphila YIT 11841]
gi|332877545|ref|ZP_08445292.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|329574267|gb|EGG55842.1| ribosomal protein S6 [Paraprevotella xylaniphila YIT 11841]
gi|332684651|gb|EGJ57501.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 113
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ +NG E+ +NE G++ +AY I K
Sbjct: 1 MNQYETVFILTPVLSDDQMKEAVNKFRGILTDNGAEI--INEENWGLKKLAYAIEKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y+ M + P I ++ R DE VLR LT+ ++ +
Sbjct: 59 FYILMEFKAQPEVIKTLEVNFRRDEKVLRFLTIKMEKY 96
>gi|218707811|ref|YP_002415330.1| 30S ribosomal protein S6 [Escherichia coli UMN026]
gi|293402825|ref|ZP_06646922.1| 30S ribosomal protein S6 [Escherichia coli FVEC1412]
gi|298378354|ref|ZP_06988238.1| small subunit ribosomal protein S6 [Escherichia coli FVEC1302]
gi|300899739|ref|ZP_07117964.1| ribosomal protein S6 [Escherichia coli MS 198-1]
gi|226703462|sp|B7NGD4|RS6_ECOLU RecName: Full=30S ribosomal protein S6
gi|218434908|emb|CAR15846.1| 30S ribosomal subunit protein S6 [Escherichia coli UMN026]
gi|291429740|gb|EFF02754.1| 30S ribosomal protein S6 [Escherichia coli FVEC1412]
gi|298280688|gb|EFI22189.1| small subunit ribosomal protein S6 [Escherichia coli FVEC1302]
gi|300356711|gb|EFJ72581.1| ribosomal protein S6 [Escherichia coli MS 198-1]
Length = 131
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETTDDAEAGDSEE 131
>gi|156972403|ref|YP_001443310.1| 30S ribosomal protein S6 [Vibrio harveyi ATCC BAA-1116]
gi|269961472|ref|ZP_06175836.1| 30S ribosomal protein S6 [Vibrio harveyi 1DA3]
gi|166227402|sp|A7MSX8|RS6_VIBHB RecName: Full=30S ribosomal protein S6
gi|156523997|gb|ABU69083.1| hypothetical protein VIBHAR_00023 [Vibrio harveyi ATCC BAA-1116]
gi|269833849|gb|EEZ87944.1| 30S ribosomal protein S6 [Vibrio harveyi 1DA3]
Length = 129
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + I E++ R ++ VLR++ + + EQS L +++R +R PR
Sbjct: 60 VLMNVEAGQEVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLK----QKEERAERAPR 115
>gi|209520393|ref|ZP_03269156.1| ribosomal protein S6 [Burkholderia sp. H160]
gi|209499178|gb|EDZ99270.1| ribosomal protein S6 [Burkholderia sp. H160]
Length = 124
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKLKKAETGPSPMMKEVQREE 110
>gi|116513235|ref|YP_812141.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116092550|gb|ABJ57703.1| SSU ribosomal protein S6P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 97
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK-AYYVF 62
YE ++++ D+ + K I +Y +I +NGGE+ + G R AY I K R+ +YY+
Sbjct: 5 YEITYIIKPDVDDEAKKAIIDKYTKVIADNGGEMVEAKDWGKRRFAYEIEKYREGSYYIM 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
A AA++E R +ID++VLRS+ + +D
Sbjct: 65 TFTAEDAAAVNEFARLSKIDDSVLRSMIVKLD 96
>gi|325270187|ref|ZP_08136794.1| 30S ribosomal protein S6 [Prevotella multiformis DSM 16608]
gi|324987488|gb|EGC19464.1| 30S ribosomal protein S6 [Prevotella multiformis DSM 16608]
Length = 114
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFRKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVIDTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|227112368|ref|ZP_03826024.1| 30S ribosomal protein S6 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227325960|ref|ZP_03829984.1| 30S ribosomal protein S6 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253689797|ref|YP_003018987.1| ribosomal protein S6 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261822829|ref|YP_003260935.1| 30S ribosomal protein S6 [Pectobacterium wasabiae WPP163]
gi|259495340|sp|C6DE15|RS6_PECCP RecName: Full=30S ribosomal protein S6
gi|251756375|gb|ACT14451.1| ribosomal protein S6 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261606842|gb|ACX89328.1| ribosomal protein S6 [Pectobacterium wasabiae WPP163]
Length = 130
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTATITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R+ R D
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFAEA 119
Query: 119 DRNVD 123
+VD
Sbjct: 120 GDDVD 124
>gi|17546026|ref|NP_519428.1| 30S ribosomal protein S6 [Ralstonia solanacearum GMI1000]
gi|24212307|sp|Q8XZT8|RS6_RALSO RecName: Full=30S ribosomal protein S6
gi|17428321|emb|CAD15009.1| probable 30s ribosomal protein s6 [Ralstonia solanacearum GMI1000]
gi|299067359|emb|CBJ38558.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum CMR15]
Length = 122
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCVNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|332283718|ref|YP_004415629.1| 30S ribosomal protein S6 [Pusillimonas sp. T7-7]
gi|330427671|gb|AEC19005.1| 30S ribosomal protein S6 [Pusillimonas sp. T7-7]
Length = 126
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +YQ ++ NGG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYQGVVTTNGGTVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI A+ E++ R ++ +LR L + + +L ++ +R++
Sbjct: 60 VCLNIECGQVALDELEHSFRYNDAILRHLVIKTKKPVTAASLMMKSVEREE 110
>gi|117919153|ref|YP_868345.1| 30S ribosomal protein S6 [Shewanella sp. ANA-3]
gi|166227385|sp|A0KT20|RS6_SHESA RecName: Full=30S ribosomal protein S6
gi|117611485|gb|ABK46939.1| SSU ribosomal protein S6P [Shewanella sp. ANA-3]
Length = 131
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL--LVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ VLR++ + V E SP + + +RD R R P
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP-MAKAKDERDSR--RGPA 116
Query: 119 -DRNVD 123
DR+ D
Sbjct: 117 GDRSYD 122
>gi|332293236|ref|YP_004431845.1| ribosomal protein S6 [Krokinobacter diaphorus 4H-3-7-5]
gi|332171322|gb|AEE20577.1| ribosomal protein S6 [Krokinobacter diaphorus 4H-3-7-5]
Length = 113
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ L++E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQIKETVKKYEGLLKEKGAKMISKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ AI++ + R DE V+R LT+ +D H S
Sbjct: 61 HLLEFTVDGQAINDYELAFRRDERVMRYLTVTLDKHAIS 99
>gi|261410092|ref|YP_003246333.1| 30S ribosomal protein S6 [Paenibacillus sp. Y412MC10]
gi|329925059|ref|ZP_08280003.1| ribosomal protein S6 [Paenibacillus sp. HGF5]
gi|261286555|gb|ACX68526.1| ribosomal protein S6 [Paenibacillus sp. Y412MC10]
gi|328940178|gb|EGG36510.1| ribosomal protein S6 [Paenibacillus sp. HGF5]
Length = 94
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ + ++Q +I NGGE+ + +G R +AY I+K R Y
Sbjct: 1 MRKYEVMYIIRPDIEQEAVQAAVDKFQGIIS-NGGEITKHDVMGKRRLAYEIKKFRDGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N + P + E++R M+I + V+R L
Sbjct: 60 VLVNFNATPEVVAELERLMKISDEVIRYL 88
>gi|126661840|ref|ZP_01732839.1| 30S ribosomal subunit protein S6 [Flavobacteria bacterium BAL38]
gi|126625219|gb|EAZ95908.1| 30S ribosomal subunit protein S6 [Flavobacteria bacterium BAL38]
Length = 113
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QQ+K+T+ +++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEQQVKETVSKFEDFLTSKGSEMVSKEDWGLKKLAYEIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKAPAEIIIAFETEFRRDERVMRFLTVSLDKH 96
>gi|16763208|ref|NP_458825.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16767637|ref|NP_463252.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144687|ref|NP_808029.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56416182|ref|YP_153257.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62182835|ref|YP_219252.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|156932421|ref|YP_001436337.1| 30S ribosomal protein S6 [Cronobacter sakazakii ATCC BAA-894]
gi|161617663|ref|YP_001591628.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168263255|ref|ZP_02685228.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464724|ref|ZP_02698627.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443034|ref|YP_002043644.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450923|ref|YP_002048433.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471096|ref|ZP_03077080.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194735616|ref|YP_002117331.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197251398|ref|YP_002149305.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197262329|ref|ZP_03162403.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197365105|ref|YP_002144742.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|200389133|ref|ZP_03215745.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204926729|ref|ZP_03217931.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205355146|ref|YP_002228947.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859536|ref|YP_002246187.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213028574|ref|ZP_03343021.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213161637|ref|ZP_03347347.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213428643|ref|ZP_03361393.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213609730|ref|ZP_03369556.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213648999|ref|ZP_03379052.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213864945|ref|ZP_03387064.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224586230|ref|YP_002640029.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910548|ref|ZP_04654385.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|260599462|ref|YP_003212033.1| 30S ribosomal protein S6 [Cronobacter turicensis z3032]
gi|283786874|ref|YP_003366739.1| 30S ribosomal subunit protein S6 [Citrobacter rodentium ICC168]
gi|54039532|sp|P66594|RS6_SALTI RecName: Full=30S ribosomal protein S6
gi|54041975|sp|P66593|RS6_SALTY RecName: Full=30S ribosomal protein S6
gi|75478846|sp|Q57GJ1|RS6_SALCH RecName: Full=30S ribosomal protein S6
gi|81599615|sp|Q5PJ58|RS6_SALPA RecName: Full=30S ribosomal protein S6
gi|166226829|sp|A7MM76|RS6_ENTS8 RecName: Full=30S ribosomal protein S6
gi|189045492|sp|A9N518|RS6_SALPB RecName: Full=30S ribosomal protein S6
gi|226695123|sp|B5F3B7|RS6_SALA4 RecName: Full=30S ribosomal protein S6
gi|226695125|sp|B5R0R8|RS6_SALEP RecName: Full=30S ribosomal protein S6
gi|226695126|sp|B5R9E8|RS6_SALG2 RecName: Full=30S ribosomal protein S6
gi|226695127|sp|B4TFD5|RS6_SALHS RecName: Full=30S ribosomal protein S6
gi|226695128|sp|B4T3F1|RS6_SALNS RecName: Full=30S ribosomal protein S6
gi|226695129|sp|B5BKK9|RS6_SALPK RecName: Full=30S ribosomal protein S6
gi|226695130|sp|B4TT33|RS6_SALSV RecName: Full=30S ribosomal protein S6
gi|254765451|sp|C0Q6F8|RS6_SALPC RecName: Full=30S ribosomal protein S6
gi|25294538|pir||AG1052 30s ribosomal protein S6 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422953|gb|AAL23211.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505516|emb|CAD06868.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140326|gb|AAO71889.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130439|gb|AAV79945.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62130468|gb|AAX68171.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|156530675|gb|ABU75501.1| hypothetical protein ESA_00200 [Cronobacter sakazakii ATCC BAA-894]
gi|161367027|gb|ABX70795.1| hypothetical protein SPAB_05526 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401697|gb|ACF61919.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194409227|gb|ACF69446.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457460|gb|EDX46299.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194711118|gb|ACF90339.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195632912|gb|EDX51366.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197096582|emb|CAR62194.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215101|gb|ACH52498.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197240584|gb|EDY23204.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|199606231|gb|EDZ04776.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204323394|gb|EDZ08589.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205274927|emb|CAR39996.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205348027|gb|EDZ34658.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206711339|emb|CAR35717.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224470758|gb|ACN48588.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|260218639|emb|CBA33949.1| 30S ribosomal protein S6 [Cronobacter turicensis z3032]
gi|261249481|emb|CBG27346.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996725|gb|ACY91610.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|282950328|emb|CBG89975.1| 30S ribosomal subunit protein S6 [Citrobacter rodentium ICC168]
gi|301160878|emb|CBW20410.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915488|dbj|BAJ39462.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320088817|emb|CBY98575.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222645|gb|EFX47717.1| SSU ribosomal protein S6p [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615553|gb|EFY12473.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618613|gb|EFY15502.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322621974|gb|EFY18824.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627698|gb|EFY24489.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631005|gb|EFY27769.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637776|gb|EFY34477.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642338|gb|EFY38943.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322643991|gb|EFY40539.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650934|gb|EFY47319.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653577|gb|EFY49905.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659762|gb|EFY56005.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662027|gb|EFY58243.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666224|gb|EFY62402.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672644|gb|EFY68755.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676074|gb|EFY72145.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680558|gb|EFY76596.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684548|gb|EFY80552.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322717337|gb|EFZ08908.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132728|gb|ADX20158.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192863|gb|EFZ78089.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197261|gb|EFZ82401.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201622|gb|EFZ86686.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206136|gb|EFZ91098.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213144|gb|EFZ97946.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215518|gb|EGA00262.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219503|gb|EGA03988.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227806|gb|EGA11960.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228976|gb|EGA13105.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236412|gb|EGA20488.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238683|gb|EGA22735.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241866|gb|EGA25895.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247985|gb|EGA31922.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254684|gb|EGA38495.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258257|gb|EGA41934.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263597|gb|EGA47118.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265807|gb|EGA49303.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270251|gb|EGA53699.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326630304|gb|EGE36647.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332991202|gb|AEF10185.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 131
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|114319743|ref|YP_741426.1| 30S ribosomal protein S6 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312363|sp|Q0AB51|RS6_ALHEH RecName: Full=30S ribosomal protein S6
gi|114226137|gb|ABI55936.1| SSU ribosomal protein S6P [Alkalilimnicola ehrlichii MLHE-1]
Length = 119
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++ NGG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPSMIERYTGIVESNGGKVHRLEDWGRRQLAYPINKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MN+ + E++ R ++ V+R++ L D P+ + ++D+
Sbjct: 60 VLMNVECGKDELDELESLFRFNDAVIRNMVLGRDEAVTEPSPLARSQEKDE 110
>gi|147679227|ref|YP_001213442.1| 30S ribosomal protein S6 [Pelotomaculum thermopropionicum SI]
gi|189045485|sp|A5CY52|RS6_PELTS RecName: Full=30S ribosomal protein S6
gi|146275324|dbj|BAF61073.1| ribosomal protein S6 [Pelotomaculum thermopropionicum SI]
Length = 95
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+LR D+ ++ + I ++++LI+ +GGE+ +++ G R +AY ++ R+ +Y
Sbjct: 1 MRKYEVIFILRPDLEEEKNAEVIEKFKNLIESHGGEIIKIDKWGKRRLAYEVKDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + I + P E+ R +I + VLR + +
Sbjct: 61 IVIQINAEPKLAAELDRVFKITDEVLRHMIV 91
>gi|78066643|ref|YP_369412.1| 30S ribosomal protein S6 [Burkholderia sp. 383]
gi|161524573|ref|YP_001579585.1| 30S ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|167586986|ref|ZP_02379374.1| ribosomal protein S6 [Burkholderia ubonensis Bu]
gi|189350671|ref|YP_001946299.1| 30S ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|221198146|ref|ZP_03571192.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2M]
gi|221208363|ref|ZP_03581366.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2]
gi|221215114|ref|ZP_03588081.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD1]
gi|91207905|sp|Q39FJ8|RS6_BURS3 RecName: Full=30S ribosomal protein S6
gi|226703433|sp|A9AJW1|RS6_BURM1 RecName: Full=30S ribosomal protein S6
gi|77967388|gb|ABB08768.1| SSU ribosomal protein S6P [Burkholderia sp. 383]
gi|160342002|gb|ABX15088.1| ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|189334693|dbj|BAG43763.1| small subunit ribosomal protein S6 [Burkholderia multivorans ATCC
17616]
gi|221165050|gb|EED97529.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD1]
gi|221171776|gb|EEE04220.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2]
gi|221182078|gb|EEE14479.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2M]
gi|325522547|gb|EGD01099.1| 30S ribosomal protein S6 [Burkholderia sp. TJI49]
Length = 124
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|206579361|ref|YP_002240848.1| ribosomal protein S6 [Klebsiella pneumoniae 342]
gi|288937505|ref|YP_003441564.1| ribosomal protein S6 [Klebsiella variicola At-22]
gi|290512243|ref|ZP_06551610.1| small subunit ribosomal protein S6 [Klebsiella sp. 1_1_55]
gi|226703477|sp|B5Y307|RS6_KLEP3 RecName: Full=30S ribosomal protein S6
gi|206568419|gb|ACI10195.1| ribosomal protein S6 [Klebsiella pneumoniae 342]
gi|288892214|gb|ADC60532.1| ribosomal protein S6 [Klebsiella variicola At-22]
gi|289775238|gb|EFD83239.1| small subunit ribosomal protein S6 [Klebsiella sp. 1_1_55]
Length = 131
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDSEAGDSEE 131
>gi|254252202|ref|ZP_04945520.1| Ribosomal protein S6 [Burkholderia dolosa AUO158]
gi|124894811|gb|EAY68691.1| Ribosomal protein S6 [Burkholderia dolosa AUO158]
Length = 133
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 10 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 69 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 109
>gi|313681801|ref|YP_004059539.1| SSU ribosomal protein s6p [Sulfuricurvum kujiense DSM 16994]
gi|313154661|gb|ADR33339.1| SSU ribosomal protein S6P [Sulfuricurvum kujiense DSM 16994]
Length = 127
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 63/95 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++ ++IK+TI + +I NGGE+ + +GM+ +AY I KN + Y+
Sbjct: 1 MRHYENLVIVKPTLTEEEIKNTIALVEEVITANGGEIVARDAMGMKKLAYPIEKNARGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + PAAI E++R+ RI+E +LR +T+ DS
Sbjct: 61 YVMYYKAAPAAIAEIERRFRINEEILRFVTMKYDS 95
>gi|332289562|ref|YP_004420414.1| 30S ribosomal protein S6 [Gallibacterium anatis UMN179]
gi|330432458|gb|AEC17517.1| 30S ribosomal protein S6 [Gallibacterium anatis UMN179]
Length = 125
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ +LR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAILRNVII 90
>gi|310644857|ref|YP_003949616.1| 30S ribosomal protein s6 [Paenibacillus polymyxa SC2]
gi|309249808|gb|ADO59375.1| 30S ribosomal protein S6 [Paenibacillus polymyxa SC2]
Length = 94
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ T+ ++Q +I GGE+ +++ R +AY I+K R +
Sbjct: 1 MRKYEVMYIIRPDIEQEAVQATVDKFQGIISNGGGEITN-HDVTKRRLAYEIKKFRDGSF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N + PA + E++R M+I + V+R L
Sbjct: 60 VLVNFTAEPAVVTELERIMKISDEVIRYL 88
>gi|146310036|ref|YP_001175110.1| 30S ribosomal protein S6 [Enterobacter sp. 638]
gi|167011246|sp|A4W5S9|RS6_ENT38 RecName: Full=30S ribosomal protein S6
gi|145316912|gb|ABP59059.1| SSU ribosomal protein S6P [Enterobacter sp. 638]
Length = 131
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + + E SP + + +R +R D F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKNAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDSDAGDSEE 131
>gi|254994705|ref|ZP_05276895.1| 30S ribosomal protein S6 [Anaplasma marginale str. Mississippi]
gi|255002818|ref|ZP_05277782.1| 30S ribosomal protein S6 [Anaplasma marginale str. Puerto Rico]
gi|255003951|ref|ZP_05278752.1| 30S ribosomal protein S6 [Anaplasma marginale str. Virginia]
gi|91207900|sp|Q5PBN1|RS6_ANAMM RecName: Full=30S ribosomal protein S6
Length = 109
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 1 MPIYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
M I + PAA+ E +R++R++E+VLR L L VD
Sbjct: 61 CMMYIRAEPAAMDEFRRRVRLNEDVLRFLCLKVD 94
>gi|149926826|ref|ZP_01915085.1| 30S ribosomal protein S6 [Limnobacter sp. MED105]
gi|149824378|gb|EDM83596.1| 30S ribosomal protein S6 [Limnobacter sp. MED105]
Length = 134
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ + +Y+ I+ NGG+V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIAFIVHPD-QSEQVPAMVEKYRGTIEANGGKVHRHEDWGRRQLAYPIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI + E++ + ++ VLR LT+ + E +P+ ++ R+
Sbjct: 60 VLLNIECSQEVLEELETAFKFNDAVLRHLTVKMKKAETAPSPMMKEVQRE 109
>gi|312131695|ref|YP_003999035.1| ssu ribosomal protein s6p [Leadbetterella byssophila DSM 17132]
gi|311908241|gb|ADQ18682.1| SSU ribosomal protein S6P [Leadbetterella byssophila DSM 17132]
Length = 120
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S QIKD + +++S++ +NG E+ G++ +AY I+ YY +
Sbjct: 6 YETVFILTPVLSDAQIKDAVDKFKSVLTDNGAEIINEEAWGLKKLAYPIQHKTTGYYQLV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P I ++ + + DE VLR LT +D H
Sbjct: 66 EFKADPKLIATLETEYKRDERVLRFLTTKLDKH 98
>gi|269103598|ref|ZP_06156295.1| SSU ribosomal protein S6p [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163496|gb|EEZ41992.1| SSU ribosomal protein S6p [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 128
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V MN+ + A I E++ R ++ V+R++ + E SP + + R +R
Sbjct: 60 VLMNVEAEQAVIDELESNFRFNDAVIRNMIMRTKGAITEPSPMMKAKEERFTKREER 116
>gi|94501372|ref|ZP_01307892.1| ribosomal protein S6 [Oceanobacter sp. RED65]
gi|94426485|gb|EAT11473.1| ribosomal protein S6 [Oceanobacter sp. RED65]
Length = 137
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y I+E GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPSMIERYTGSIKEAGGQIHRLEDWGRRHLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQ-RHDRDDRNDRFP 117
V MNI + E+ R ++ V+RS+ + + E SP + R DR D P
Sbjct: 60 VLMNIECDNDTLAELNNTFRFNDAVIRSMVIRMKDAVTEASPIKAAESRQDRRDEPKAEP 119
Query: 118 R 118
+
Sbjct: 120 K 120
>gi|104783860|ref|YP_610358.1| 30S ribosomal protein S6 [Pseudomonas entomophila L48]
gi|122401638|sp|Q1I461|RS6_PSEE4 RecName: Full=30S ribosomal protein S6
gi|95112847|emb|CAK17575.1| 30S ribosomal protein S6 [Pseudomonas entomophila L48]
Length = 141
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V +N+ A+ E++ R ++ V+R+L + D P+
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGPS 100
>gi|107028947|ref|YP_626042.1| 30S ribosomal protein S6 [Burkholderia cenocepacia AU 1054]
gi|116689895|ref|YP_835518.1| 30S ribosomal protein S6 [Burkholderia cenocepacia HI2424]
gi|123179949|sp|Q1BH36|RS6_BURCA RecName: Full=30S ribosomal protein S6
gi|166226806|sp|A0K7Z8|RS6_BURCH RecName: Full=30S ribosomal protein S6
gi|105898111|gb|ABF81069.1| SSU ribosomal protein S6P [Burkholderia cenocepacia AU 1054]
gi|116647984|gb|ABK08625.1| SSU ribosomal protein S6P [Burkholderia cenocepacia HI2424]
Length = 124
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|15804789|ref|NP_290830.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 EDL933]
gi|15834430|ref|NP_313203.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. Sakai]
gi|24115554|ref|NP_710064.1| 30S ribosomal protein S6 [Shigella flexneri 2a str. 301]
gi|26251098|ref|NP_757138.1| 30S ribosomal protein S6 [Escherichia coli CFT073]
gi|30065571|ref|NP_839742.1| 30S ribosomal protein S6 [Shigella flexneri 2a str. 2457T]
gi|74314681|ref|YP_313100.1| 30S ribosomal protein S6 [Shigella sonnei Ss046]
gi|82546558|ref|YP_410505.1| 30S ribosomal protein S6 [Shigella boydii Sb227]
gi|82779398|ref|YP_405747.1| 30S ribosomal protein S6 [Shigella dysenteriae Sd197]
gi|89110920|ref|AP_004700.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. W3110]
gi|91213749|ref|YP_543735.1| 30S ribosomal protein S6 [Escherichia coli UTI89]
gi|110808115|ref|YP_691635.1| 30S ribosomal protein S6 [Shigella flexneri 5 str. 8401]
gi|117626546|ref|YP_859869.1| 30S ribosomal protein S6 [Escherichia coli APEC O1]
gi|157157810|ref|YP_001465700.1| 30S ribosomal protein S6 [Escherichia coli E24377A]
gi|157163665|ref|YP_001460983.1| 30S ribosomal protein S6 [Escherichia coli HS]
gi|168751448|ref|ZP_02776470.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4113]
gi|168754772|ref|ZP_02779779.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4401]
gi|168760443|ref|ZP_02785450.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4501]
gi|168766480|ref|ZP_02791487.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4486]
gi|168774087|ref|ZP_02799094.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4196]
gi|168780633|ref|ZP_02805640.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4076]
gi|168784838|ref|ZP_02809845.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC869]
gi|168801856|ref|ZP_02826863.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC508]
gi|170021790|ref|YP_001726744.1| 30S ribosomal protein S6 [Escherichia coli ATCC 8739]
gi|170083646|ref|YP_001732966.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. DH10B]
gi|170682447|ref|YP_001746595.1| 30S ribosomal protein S6 [Escherichia coli SMS-3-5]
gi|170766562|ref|ZP_02901015.1| ribosomal protein S6 [Escherichia albertii TW07627]
gi|187734235|ref|YP_001882889.1| 30S ribosomal protein S6 [Shigella boydii CDC 3083-94]
gi|191165624|ref|ZP_03027464.1| ribosomal protein S6 [Escherichia coli B7A]
gi|191170756|ref|ZP_03032308.1| ribosomal protein S6 [Escherichia coli F11]
gi|193066024|ref|ZP_03047082.1| ribosomal protein S6 [Escherichia coli E22]
gi|193070872|ref|ZP_03051804.1| ribosomal protein S6 [Escherichia coli E110019]
gi|194426546|ref|ZP_03059100.1| ribosomal protein S6 [Escherichia coli B171]
gi|194434603|ref|ZP_03066860.1| ribosomal protein S6 [Shigella dysenteriae 1012]
gi|195935990|ref|ZP_03081372.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. EC4024]
gi|208809437|ref|ZP_03251774.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4206]
gi|208812869|ref|ZP_03254198.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4045]
gi|208818740|ref|ZP_03259060.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4042]
gi|209398367|ref|YP_002273742.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4115]
gi|209921690|ref|YP_002295774.1| 30S ribosomal protein S6 [Escherichia coli SE11]
gi|215489544|ref|YP_002331975.1| 30S ribosomal protein S6 [Escherichia coli O127:H6 str. E2348/69]
gi|217324465|ref|ZP_03440549.1| ribosomal protein S6 [Escherichia coli O157:H7 str. TW14588]
gi|218551470|ref|YP_002385262.1| 30S ribosomal protein S6 [Escherichia fergusonii ATCC 35469]
gi|218556752|ref|YP_002389666.1| 30S ribosomal protein S6 [Escherichia coli IAI1]
gi|218561359|ref|YP_002394272.1| 30S ribosomal protein S6 [Escherichia coli S88]
gi|218692583|ref|YP_002400795.1| 30S ribosomal protein S6 [Escherichia coli ED1a]
gi|218697951|ref|YP_002405618.1| 30S ribosomal protein S6 [Escherichia coli 55989]
gi|218702897|ref|YP_002410526.1| 30S ribosomal protein S6 [Escherichia coli IAI39]
gi|227886756|ref|ZP_04004561.1| ribosomal protein S6 [Escherichia coli 83972]
gi|237703868|ref|ZP_04534349.1| ribosomal protein S6 [Escherichia sp. 3_2_53FAA]
gi|238903307|ref|YP_002929103.1| 30S ribosomal subunit protein S6 [Escherichia coli BW2952]
gi|254037220|ref|ZP_04871297.1| 30S ribosomal subunit protein S6 [Escherichia sp. 1_1_43]
gi|254796219|ref|YP_003081056.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. TW14359]
gi|256019845|ref|ZP_05433710.1| 30S ribosomal protein S6 [Shigella sp. D9]
gi|260847030|ref|YP_003224808.1| 30S ribosomal subunit protein S6 [Escherichia coli O103:H2 str.
12009]
gi|260858352|ref|YP_003232243.1| 30S ribosomal subunit protein S6 [Escherichia coli O26:H11 str.
11368]
gi|260870892|ref|YP_003237294.1| 30S ribosomal subunit protein S6 [Escherichia coli O111:H- str.
11128]
gi|261225320|ref|ZP_05939601.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255428|ref|ZP_05947961.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
FRIK966]
gi|291285612|ref|YP_003502430.1| Ribosomal protein S6 [Escherichia coli O55:H7 str. CB9615]
gi|293407925|ref|ZP_06651765.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417703|ref|ZP_06660325.1| 30S ribosomal protein S6 [Escherichia coli B185]
gi|293476509|ref|ZP_06664917.1| 30S ribosomal protein S6 [Escherichia coli B088]
gi|296044035|ref|NP_418621.5| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|300816498|ref|ZP_07096719.1| ribosomal protein S6 [Escherichia coli MS 107-1]
gi|300821294|ref|ZP_07101442.1| ribosomal protein S6 [Escherichia coli MS 119-7]
gi|300906030|ref|ZP_07123754.1| ribosomal protein S6 [Escherichia coli MS 84-1]
gi|300918338|ref|ZP_07134939.1| ribosomal protein S6 [Escherichia coli MS 115-1]
gi|300922392|ref|ZP_07138512.1| ribosomal protein S6 [Escherichia coli MS 182-1]
gi|300940687|ref|ZP_07155248.1| ribosomal protein S6 [Escherichia coli MS 21-1]
gi|300949167|ref|ZP_07163209.1| ribosomal protein S6 [Escherichia coli MS 116-1]
gi|300955264|ref|ZP_07167657.1| ribosomal protein S6 [Escherichia coli MS 175-1]
gi|300987234|ref|ZP_07178063.1| ribosomal protein S6 [Escherichia coli MS 45-1]
gi|300988552|ref|ZP_07178748.1| ribosomal protein S6 [Escherichia coli MS 200-1]
gi|301024524|ref|ZP_07188199.1| ribosomal protein S6 [Escherichia coli MS 69-1]
gi|301045966|ref|ZP_07193149.1| ribosomal protein S6 [Escherichia coli MS 185-1]
gi|301302617|ref|ZP_07208747.1| ribosomal protein S6 [Escherichia coli MS 124-1]
gi|301325965|ref|ZP_07219386.1| ribosomal protein S6 [Escherichia coli MS 78-1]
gi|306815585|ref|ZP_07449734.1| 30S ribosomal protein S6 [Escherichia coli NC101]
gi|307140897|ref|ZP_07500253.1| 30S ribosomal protein S6 [Escherichia coli H736]
gi|307314851|ref|ZP_07594443.1| ribosomal protein S6 [Escherichia coli W]
gi|309787732|ref|ZP_07682343.1| ribosomal protein S6 [Shigella dysenteriae 1617]
gi|309797012|ref|ZP_07691412.1| ribosomal protein S6 [Escherichia coli MS 145-7]
gi|312965874|ref|ZP_07780100.1| ribosomal protein S6 [Escherichia coli 2362-75]
gi|312973991|ref|ZP_07788162.1| ribosomal protein S6 [Escherichia coli 1827-70]
gi|331644952|ref|ZP_08346069.1| ribosomal protein S6 [Escherichia coli H736]
gi|331650325|ref|ZP_08351397.1| ribosomal protein S6 [Escherichia coli M605]
gi|331656029|ref|ZP_08357017.1| ribosomal protein S6 [Escherichia coli M718]
gi|331660775|ref|ZP_08361707.1| ribosomal protein S6 [Escherichia coli TA206]
gi|331665864|ref|ZP_08366758.1| ribosomal protein S6 [Escherichia coli TA143]
gi|331671109|ref|ZP_08371942.1| ribosomal protein S6 [Escherichia coli TA271]
gi|331671352|ref|ZP_08372150.1| ribosomal protein S6 [Escherichia coli TA280]
gi|331680330|ref|ZP_08380989.1| ribosomal protein S6 [Escherichia coli H591]
gi|331681219|ref|ZP_08381856.1| ribosomal protein S6 [Escherichia coli H299]
gi|332280985|ref|ZP_08393398.1| 30S ribosomal subunit protein S6 [Shigella sp. D9]
gi|61236240|sp|P0A4D0|RS6_ECOL6 RecName: Full=30S ribosomal protein S6
gi|61236246|sp|P0A4D1|RS6_ECO57 RecName: Full=30S ribosomal protein S6
gi|61236252|sp|P0A4D2|RS6_SHIFL RecName: Full=30S ribosomal protein S6
gi|91207789|sp|Q31TD1|RS6_SHIBS RecName: Full=30S ribosomal protein S6
gi|91207790|sp|Q328J9|RS6_SHIDS RecName: Full=30S ribosomal protein S6
gi|91207791|sp|Q3YUE7|RS6_SHISS RecName: Full=30S ribosomal protein S6
gi|122421451|sp|Q1R360|RS6_ECOUT RecName: Full=30S ribosomal protein S6
gi|122956957|sp|Q0SX85|RS6_SHIF8 RecName: Full=30S ribosomal protein S6
gi|166226828|sp|A1AJA5|RS6_ECOK1 RecName: Full=30S ribosomal protein S6
gi|167011244|sp|A7ZV71|RS6_ECO24 RecName: Full=30S ribosomal protein S6
gi|167011245|sp|A8A7U6|RS6_ECOHS RecName: Full=30S ribosomal protein S6
gi|189045466|sp|B1IT06|RS6_ECOLC RecName: Full=30S ribosomal protein S6
gi|226695261|sp|B2TY73|RS6_SHIB3 RecName: Full=30S ribosomal protein S6
gi|226703457|sp|B7MLK5|RS6_ECO45 RecName: Full=30S ribosomal protein S6
gi|226703458|sp|B5Z2K6|RS6_ECO5E RecName: Full=30S ribosomal protein S6
gi|226703459|sp|B7NTQ6|RS6_ECO7I RecName: Full=30S ribosomal protein S6
gi|226703460|sp|B7M9G2|RS6_ECO8A RecName: Full=30S ribosomal protein S6
gi|226703461|sp|B1XDV1|RS6_ECODH RecName: Full=30S ribosomal protein S6
gi|226703463|sp|B6I2A6|RS6_ECOSE RecName: Full=30S ribosomal protein S6
gi|226703464|sp|B1LQM0|RS6_ECOSM RecName: Full=30S ribosomal protein S6
gi|226703467|sp|B7LLY2|RS6_ESCF3 RecName: Full=30S ribosomal protein S6
gi|254765436|sp|B7UQK9|RS6_ECO27 RecName: Full=30S ribosomal protein S6
gi|254765437|sp|B7LCQ6|RS6_ECO55 RecName: Full=30S ribosomal protein S6
gi|254765438|sp|B7MST0|RS6_ECO81 RecName: Full=30S ribosomal protein S6
gi|259495332|sp|C4ZR77|RS6_ECOBW RecName: Full=30S ribosomal protein S6
gi|12519191|gb|AAG59396.1|AE005652_13 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
EDL933]
gi|26111530|gb|AAN83712.1|AE016771_223 30S ribosomal protein S6 [Escherichia coli CFT073]
gi|42845|emb|CAA27652.1| unnamed protein product [Escherichia coli]
gi|537041|gb|AAA97096.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|13364653|dbj|BAB38599.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
Sakai]
gi|24054885|gb|AAN45771.1| 30S ribosomal subunit protein S6 [Shigella flexneri 2a str. 301]
gi|30043835|gb|AAP19554.1| 30S ribosomal subunit protein S6 [Shigella flexneri 2a str. 2457T]
gi|73858158|gb|AAZ90865.1| 30S ribosomal subunit protein S6 [Shigella sonnei Ss046]
gi|81243546|gb|ABB64256.1| 30S ribosomal subunit protein S6 [Shigella dysenteriae Sd197]
gi|81247969|gb|ABB68677.1| 30S ribosomal subunit protein S6 [Shigella boydii Sb227]
gi|85676951|dbj|BAE78201.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K12 substr.
W3110]
gi|91075323|gb|ABE10204.1| 30S ribosomal protein S6 [Escherichia coli UTI89]
gi|110617663|gb|ABF06330.1| 30S ribosomal subunit protein S6 [Shigella flexneri 5 str. 8401]
gi|115515670|gb|ABJ03745.1| 30S ribosomal subunit protein S6 [Escherichia coli APEC O1]
gi|157069345|gb|ABV08600.1| ribosomal protein S6 [Escherichia coli HS]
gi|157079840|gb|ABV19548.1| ribosomal protein S6 [Escherichia coli E24377A]
gi|169756718|gb|ACA79417.1| ribosomal protein S6 [Escherichia coli ATCC 8739]
gi|169891481|gb|ACB05188.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. DH10B]
gi|170124000|gb|EDS92931.1| ribosomal protein S6 [Escherichia albertii TW07627]
gi|170520165|gb|ACB18343.1| ribosomal protein S6 [Escherichia coli SMS-3-5]
gi|187431227|gb|ACD10501.1| ribosomal protein S6 [Shigella boydii CDC 3083-94]
gi|187770274|gb|EDU34118.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4196]
gi|188014482|gb|EDU52604.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4113]
gi|189001825|gb|EDU70811.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4076]
gi|189357892|gb|EDU76311.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4401]
gi|189363927|gb|EDU82346.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4486]
gi|189368955|gb|EDU87371.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4501]
gi|189375098|gb|EDU93514.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC869]
gi|189376062|gb|EDU94478.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC508]
gi|190904319|gb|EDV64028.1| ribosomal protein S6 [Escherichia coli B7A]
gi|190908980|gb|EDV68567.1| ribosomal protein S6 [Escherichia coli F11]
gi|192926347|gb|EDV80983.1| ribosomal protein S6 [Escherichia coli E22]
gi|192955818|gb|EDV86289.1| ribosomal protein S6 [Escherichia coli E110019]
gi|194415285|gb|EDX31553.1| ribosomal protein S6 [Escherichia coli B171]
gi|194417188|gb|EDX33300.1| ribosomal protein S6 [Shigella dysenteriae 1012]
gi|208729238|gb|EDZ78839.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4206]
gi|208734146|gb|EDZ82833.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4045]
gi|208738863|gb|EDZ86545.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4042]
gi|209159767|gb|ACI37200.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4115]
gi|209750008|gb|ACI73311.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750010|gb|ACI73312.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750012|gb|ACI73313.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750016|gb|ACI73315.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209914949|dbj|BAG80023.1| 30S ribosomal protein S6 [Escherichia coli SE11]
gi|215267616|emb|CAS12071.1| 30S ribosomal subunit protein S6 [Escherichia coli O127:H6 str.
E2348/69]
gi|217320686|gb|EEC29110.1| ribosomal protein S6 [Escherichia coli O157:H7 str. TW14588]
gi|218354683|emb|CAV01699.1| 30S ribosomal subunit protein S6 [Escherichia coli 55989]
gi|218359012|emb|CAQ91672.1| 30S ribosomal subunit protein S6 [Escherichia fergusonii ATCC
35469]
gi|218363521|emb|CAR01175.1| 30S ribosomal subunit protein S6 [Escherichia coli IAI1]
gi|218368128|emb|CAR05935.1| 30S ribosomal subunit protein S6 [Escherichia coli S88]
gi|218372883|emb|CAR20763.1| 30S ribosomal subunit protein S6 [Escherichia coli IAI39]
gi|218430147|emb|CAR11005.1| 30S ribosomal subunit protein S6 [Escherichia coli ED1a]
gi|222035970|emb|CAP78715.1| 30S ribosomal protein S6 [Escherichia coli LF82]
gi|226840326|gb|EEH72328.1| 30S ribosomal subunit protein S6 [Escherichia sp. 1_1_43]
gi|226901780|gb|EEH88039.1| ribosomal protein S6 [Escherichia sp. 3_2_53FAA]
gi|227836329|gb|EEJ46795.1| ribosomal protein S6 [Escherichia coli 83972]
gi|238859801|gb|ACR61799.1| 30S ribosomal subunit protein S6 [Escherichia coli BW2952]
gi|254595619|gb|ACT74980.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
TW14359]
gi|257757001|dbj|BAI28503.1| 30S ribosomal subunit protein S6 [Escherichia coli O26:H11 str.
11368]
gi|257762177|dbj|BAI33674.1| 30S ribosomal subunit protein S6 [Escherichia coli O103:H2 str.
12009]
gi|257767248|dbj|BAI38743.1| 30S ribosomal subunit protein S6 [Escherichia coli O111:H- str.
11128]
gi|260450973|gb|ACX41395.1| ribosomal protein S6 [Escherichia coli DH1]
gi|281181296|dbj|BAI57626.1| 30S ribosomal protein S6 [Escherichia coli SE15]
gi|284924380|emb|CBG37502.1| 30S ribosomal subunit protein S6 [Escherichia coli 042]
gi|290765485|gb|ADD59446.1| Ribosomal protein S6 [Escherichia coli O55:H7 str. CB9615]
gi|291320962|gb|EFE60404.1| 30S ribosomal protein S6 [Escherichia coli B088]
gi|291430421|gb|EFF03419.1| 30S ribosomal protein S6 [Escherichia coli B185]
gi|291472176|gb|EFF14658.1| conserved hypothetical protein [Escherichia coli B354]
gi|294491735|gb|ADE90491.1| ribosomal protein S6 [Escherichia coli IHE3034]
gi|296040586|gb|AAC77157.5| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|300302009|gb|EFJ58394.1| ribosomal protein S6 [Escherichia coli MS 185-1]
gi|300305898|gb|EFJ60418.1| ribosomal protein S6 [Escherichia coli MS 200-1]
gi|300317841|gb|EFJ67625.1| ribosomal protein S6 [Escherichia coli MS 175-1]
gi|300396523|gb|EFJ80061.1| ribosomal protein S6 [Escherichia coli MS 69-1]
gi|300402197|gb|EFJ85735.1| ribosomal protein S6 [Escherichia coli MS 84-1]
gi|300407711|gb|EFJ91249.1| ribosomal protein S6 [Escherichia coli MS 45-1]
gi|300414470|gb|EFJ97780.1| ribosomal protein S6 [Escherichia coli MS 115-1]
gi|300421211|gb|EFK04522.1| ribosomal protein S6 [Escherichia coli MS 182-1]
gi|300451415|gb|EFK15035.1| ribosomal protein S6 [Escherichia coli MS 116-1]
gi|300454575|gb|EFK18068.1| ribosomal protein S6 [Escherichia coli MS 21-1]
gi|300526183|gb|EFK47252.1| ribosomal protein S6 [Escherichia coli MS 119-7]
gi|300530728|gb|EFK51790.1| ribosomal protein S6 [Escherichia coli MS 107-1]
gi|300842142|gb|EFK69902.1| ribosomal protein S6 [Escherichia coli MS 124-1]
gi|300847318|gb|EFK75078.1| ribosomal protein S6 [Escherichia coli MS 78-1]
gi|305851247|gb|EFM51702.1| 30S ribosomal protein S6 [Escherichia coli NC101]
gi|306905654|gb|EFN36183.1| ribosomal protein S6 [Escherichia coli W]
gi|307556367|gb|ADN49142.1| 30S ribosomal subunit protein S6 [Escherichia coli ABU 83972]
gi|307629272|gb|ADN73576.1| 30S ribosomal protein S6 [Escherichia coli UM146]
gi|308119425|gb|EFO56687.1| ribosomal protein S6 [Escherichia coli MS 145-7]
gi|308924482|gb|EFP69978.1| ribosomal protein S6 [Shigella dysenteriae 1617]
gi|309704704|emb|CBJ04055.1| 30S ribosomal subunit protein S6 [Escherichia coli ETEC H10407]
gi|310331525|gb|EFP98781.1| ribosomal protein S6 [Escherichia coli 1827-70]
gi|312289117|gb|EFR17011.1| ribosomal protein S6 [Escherichia coli 2362-75]
gi|312948850|gb|ADR29677.1| 30S ribosomal protein S6 [Escherichia coli O83:H1 str. NRG 857C]
gi|315063514|gb|ADT77841.1| 30S ribosomal subunit protein S6 [Escherichia coli W]
gi|315138754|dbj|BAJ45913.1| ribosomal protein S6 [Escherichia coli DH1]
gi|315255545|gb|EFU35513.1| ribosomal protein S6 [Escherichia coli MS 85-1]
gi|315288481|gb|EFU47879.1| ribosomal protein S6 [Escherichia coli MS 110-3]
gi|315293517|gb|EFU52869.1| ribosomal protein S6 [Escherichia coli MS 153-1]
gi|315299081|gb|EFU58335.1| ribosomal protein S6 [Escherichia coli MS 16-3]
gi|315617609|gb|EFU98215.1| ribosomal protein S6 [Escherichia coli 3431]
gi|320176374|gb|EFW51429.1| SSU ribosomal protein S6p [Shigella dysenteriae CDC 74-1112]
gi|320177566|gb|EFW52556.1| SSU ribosomal protein S6p [Shigella boydii ATCC 9905]
gi|320187350|gb|EFW62044.1| SSU ribosomal protein S6p [Shigella flexneri CDC 796-83]
gi|320190670|gb|EFW65320.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. EC1212]
gi|320193686|gb|EFW68321.1| SSU ribosomal protein S6p [Escherichia coli WV_060327]
gi|320200671|gb|EFW75257.1| SSU ribosomal protein S6p [Escherichia coli EC4100B]
gi|320638958|gb|EFX08604.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. G5101]
gi|320644327|gb|EFX13392.1| 30S ribosomal protein S6 [Escherichia coli O157:H- str. 493-89]
gi|320649645|gb|EFX18169.1| 30S ribosomal protein S6 [Escherichia coli O157:H- str. H 2687]
gi|320655041|gb|EFX23002.1| 30S ribosomal protein S6 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660548|gb|EFX28009.1| 30S ribosomal protein S6 [Escherichia coli O55:H7 str. USDA 5905]
gi|320665817|gb|EFX32854.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. LSU-61]
gi|323155982|gb|EFZ42144.1| ribosomal protein S6 [Escherichia coli EPECa14]
gi|323161992|gb|EFZ47864.1| ribosomal protein S6 [Escherichia coli E128010]
gi|323166684|gb|EFZ52442.1| ribosomal protein S6 [Shigella sonnei 53G]
gi|323171639|gb|EFZ57285.1| ribosomal protein S6 [Escherichia coli LT-68]
gi|323176041|gb|EFZ61633.1| ribosomal protein S6 [Escherichia coli 1180]
gi|323182306|gb|EFZ67716.1| ribosomal protein S6 [Escherichia coli 1357]
gi|323189921|gb|EFZ75199.1| ribosomal protein S6 [Escherichia coli RN587/1]
gi|323380407|gb|ADX52675.1| ribosomal protein S6 [Escherichia coli KO11]
gi|323935325|gb|EGB31673.1| ribosomal protein S6 [Escherichia coli E1520]
gi|323946049|gb|EGB42086.1| ribosomal protein S6 [Escherichia coli H120]
gi|323950731|gb|EGB46609.1| ribosomal protein S6 [Escherichia coli H252]
gi|323955487|gb|EGB51251.1| ribosomal protein S6 [Escherichia coli H263]
gi|323960244|gb|EGB55885.1| ribosomal protein S6 [Escherichia coli H489]
gi|323965587|gb|EGB61041.1| ribosomal protein S6 [Escherichia coli M863]
gi|323975458|gb|EGB70559.1| ribosomal protein S6 [Escherichia coli TW10509]
gi|324005264|gb|EGB74483.1| ribosomal protein S6 [Escherichia coli MS 57-2]
gi|324013800|gb|EGB83019.1| ribosomal protein S6 [Escherichia coli MS 60-1]
gi|324019378|gb|EGB88597.1| ribosomal protein S6 [Escherichia coli MS 117-3]
gi|324112203|gb|EGC06181.1| ribosomal protein S6 [Escherichia fergusonii B253]
gi|324118766|gb|EGC12658.1| ribosomal protein S6 [Escherichia coli E1167]
gi|325499735|gb|EGC97594.1| 30S ribosomal protein S6 [Escherichia fergusonii ECD227]
gi|326345470|gb|EGD69213.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. 1125]
gi|326346673|gb|EGD70407.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. 1044]
gi|327250141|gb|EGE61860.1| ribosomal protein S6 [Escherichia coli STEC_7v]
gi|330908542|gb|EGH37061.1| SSU ribosomal protein S6p [Escherichia coli AA86]
gi|331035927|gb|EGI08165.1| ribosomal protein S6 [Escherichia coli H736]
gi|331040719|gb|EGI12877.1| ribosomal protein S6 [Escherichia coli M605]
gi|331046383|gb|EGI18473.1| ribosomal protein S6 [Escherichia coli M718]
gi|331051817|gb|EGI23856.1| ribosomal protein S6 [Escherichia coli TA206]
gi|331056915|gb|EGI28909.1| ribosomal protein S6 [Escherichia coli TA143]
gi|331061698|gb|EGI33624.1| ribosomal protein S6 [Escherichia coli TA271]
gi|331071197|gb|EGI42554.1| ribosomal protein S6 [Escherichia coli TA280]
gi|331071793|gb|EGI43129.1| ribosomal protein S6 [Escherichia coli H591]
gi|331081440|gb|EGI52601.1| ribosomal protein S6 [Escherichia coli H299]
gi|332083202|gb|EGI88433.1| ribosomal protein S6 [Shigella boydii 5216-82]
gi|332087226|gb|EGI92360.1| ribosomal protein S6 [Shigella boydii 3594-74]
gi|332103337|gb|EGJ06683.1| 30S ribosomal subunit protein S6 [Shigella sp. D9]
gi|332346282|gb|AEE59616.1| ribosomal protein S6 RpsF [Escherichia coli UMNK88]
gi|332749077|gb|EGJ79500.1| ribosomal protein S6 [Shigella flexneri K-671]
gi|332761886|gb|EGJ92160.1| ribosomal protein S6 [Shigella flexneri 2747-71]
gi|333009462|gb|EGK28918.1| ribosomal protein S6 [Shigella flexneri K-218]
gi|333011182|gb|EGK30596.1| ribosomal protein S6 [Shigella flexneri K-272]
gi|333012624|gb|EGK32004.1| ribosomal protein S6 [Shigella flexneri K-227]
gi|333022264|gb|EGK41502.1| ribosomal protein S6 [Shigella flexneri K-304]
Length = 131
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|59712919|ref|YP_205695.1| 30S ribosomal protein S6 [Vibrio fischeri ES114]
gi|197336125|ref|YP_002157108.1| ribosomal protein S6 [Vibrio fischeri MJ11]
gi|75353318|sp|Q5E2D9|RS6_VIBF1 RecName: Full=30S ribosomal protein S6
gi|226705646|sp|B5FBQ3|RS6_VIBFM RecName: Full=30S ribosomal protein S6
gi|59481020|gb|AAW86807.1| 30S ribosomal subunit protein S6 [Vibrio fischeri ES114]
gi|197317615|gb|ACH67062.1| ribosomal protein S6 [Vibrio fischeri MJ11]
Length = 126
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ S A I E++ R ++ VLR++ + + P++ ++
Sbjct: 60 VLMNVESEQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSVMMK 104
>gi|300715052|ref|YP_003739855.1| 30S ribosomal protein S6 [Erwinia billingiae Eb661]
gi|299060888|emb|CAX57995.1| 30S ribosomal protein S6 [Erwinia billingiae Eb661]
Length = 131
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + V E SP + + RD R D F
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRDRRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ + D SEE
Sbjct: 119 ETSDDADAGDSEE 131
>gi|88607094|ref|YP_504775.1| 30S ribosomal protein S6 [Anaplasma phagocytophilum HZ]
gi|123495753|sp|Q2GLH6|RS6_ANAPZ RecName: Full=30S ribosomal protein S6
gi|88598157|gb|ABD43627.1| ribosomal protein S6 [Anaplasma phagocytophilum HZ]
Length = 109
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE F+ +Q ++ +++ +L+ + G E+ G+ Y I KN K +Y
Sbjct: 1 MPFYEFAFIAQQGLTQYELEGLSKGLTALLVKMGAELVKYEYWGLLDFVYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
M I + PAA+ E KRK++++E+VLR L L VD
Sbjct: 61 CMMYIRAEPAAMDEFKRKVKLNEDVLRFLCLKVD 94
>gi|78042831|ref|YP_358907.1| 30S ribosomal protein S6 [Carboxydothermus hydrogenoformans
Z-2901]
gi|91207906|sp|Q3AG27|RS6_CARHZ RecName: Full=30S ribosomal protein S6
gi|77994946|gb|ABB13845.1| ribosomal protein S6 [Carboxydothermus hydrogenoformans Z-2901]
Length = 96
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE +++L ++ +++ + I +++ +I++ GGEV ++ G R AY I+K R+ YY
Sbjct: 2 LRQYEVMYILHPELDAEKTESIIERFKGMIEQEGGEVTKIDRWGKRRFAYEIKKLREGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN + E+ R +RI ++V+R + +
Sbjct: 62 VVMNFKAKAETAQELDRLLRISDDVVRHIVI 92
>gi|86130270|ref|ZP_01048870.1| 30S ribosomal protein S6 [Dokdonia donghaensis MED134]
gi|85818945|gb|EAQ40104.1| 30S ribosomal protein S6 [Dokdonia donghaensis MED134]
Length = 113
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ L++E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQIKETVKKYEGLLKEKGAKMISKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ AI++ + R DE V+R LT+ +D H S
Sbjct: 61 HLLEFTVDGQAINDYELAFRRDERVMRYLTVAMDKHAIS 99
>gi|50122534|ref|YP_051701.1| 30S ribosomal protein S6 [Pectobacterium atrosepticum SCRI1043]
gi|61215523|sp|Q6D135|RS6_ERWCT RecName: Full=30S ribosomal protein S6
gi|49613060|emb|CAG76511.1| 30S ribosomal protein S6 [Pectobacterium atrosepticum SCRI1043]
Length = 130
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTATITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R+ R D
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRED 115
>gi|78485708|ref|YP_391633.1| ribosomal protein S6 [Thiomicrospira crunogena XCL-2]
gi|91207798|sp|Q31FW4|RS6_THICR RecName: Full=30S ribosomal protein S6
gi|78363994|gb|ABB41959.1| SSU ribosomal protein S6P [Thiomicrospira crunogena XCL-2]
Length = 114
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ENGG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYRGLIEENGGAIHRLEDWGRRQLAYLINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ MNI + E++ ++ VLR + + + P++ + + R D+
Sbjct: 60 ILMNIECDQETLKELENLFYYNDAVLRDMFIKRNEAVTEPSVMASQKEDKRRGDK 114
>gi|83749659|ref|ZP_00946640.1| SSU ribosomal protein S6P [Ralstonia solanacearum UW551]
gi|187928271|ref|YP_001898758.1| 30S ribosomal protein S6 [Ralstonia pickettii 12J]
gi|207723261|ref|YP_002253660.1| 30s ribosomal protein s6 [Ralstonia solanacearum MolK2]
gi|207743344|ref|YP_002259736.1| 30s ribosomal protein s6 [Ralstonia solanacearum IPO1609]
gi|241662844|ref|YP_002981204.1| 30S ribosomal protein S6 [Ralstonia pickettii 12D]
gi|309782230|ref|ZP_07676959.1| ribosomal protein S6 [Ralstonia sp. 5_7_47FAA]
gi|226695118|sp|B2UAG4|RS6_RALPJ RecName: Full=30S ribosomal protein S6
gi|83723661|gb|EAP70858.1| SSU ribosomal protein S6P [Ralstonia solanacearum UW551]
gi|187725161|gb|ACD26326.1| ribosomal protein S6 [Ralstonia pickettii 12J]
gi|206588459|emb|CAQ35422.1| 30s ribosomal protein s6 [Ralstonia solanacearum MolK2]
gi|206594741|emb|CAQ61668.1| 30s ribosomal protein s6 [Ralstonia solanacearum IPO1609]
gi|240864871|gb|ACS62532.1| ribosomal protein S6 [Ralstonia pickettii 12D]
gi|308919001|gb|EFP64669.1| ribosomal protein S6 [Ralstonia sp. 5_7_47FAA]
Length = 122
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V +NI + E++ + ++ VLR L + E +P+
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPS 100
>gi|302879169|ref|YP_003847733.1| 30S ribosomal protein S6 [Gallionella capsiferriformans ES-2]
gi|302581958|gb|ADL55969.1| ribosomal protein S6 [Gallionella capsiferriformans ES-2]
Length = 126
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRTLVTAKGGQIHRLEDWGRRQLAYAIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + E++ R ++ VLR LT+
Sbjct: 60 VLMNIECNQEILDELEHAFRFNDAVLRHLTV 90
>gi|161505108|ref|YP_001572219.1| 30S ribosomal protein S6 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189045491|sp|A9MFL1|RS6_SALAR RecName: Full=30S ribosomal protein S6
gi|160866455|gb|ABX23078.1| hypothetical protein SARI_03242 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 131
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMIMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|296274357|ref|YP_003656988.1| 30S ribosomal protein S6 [Arcobacter nitrofigilis DSM 7299]
gi|296098531|gb|ADG94481.1| ribosomal protein S6 [Arcobacter nitrofigilis DSM 7299]
Length = 120
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 63/103 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F+++ ++ ++ I ++ I++NGGE+ +++G R +AY I K+++ +Y
Sbjct: 4 IKHYETMFIVKPTMTEEETVAQIELVKANIEKNGGEIVSFDDMGTRQLAYEIEKHKRGHY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
M +P +I E++R RI+EN++R + + +S ++ T
Sbjct: 64 YVMYFRAPTTSILELERNYRINENIIRFIFIKYESKKEVTAWT 106
>gi|115351862|ref|YP_773701.1| 30S ribosomal protein S6 [Burkholderia ambifaria AMMD]
gi|134295904|ref|YP_001119639.1| 30S ribosomal protein S6 [Burkholderia vietnamiensis G4]
gi|170703444|ref|ZP_02894215.1| ribosomal protein S6 [Burkholderia ambifaria IOP40-10]
gi|171321590|ref|ZP_02910521.1| ribosomal protein S6 [Burkholderia ambifaria MEX-5]
gi|172060832|ref|YP_001808484.1| 30S ribosomal protein S6 [Burkholderia ambifaria MC40-6]
gi|122323036|sp|Q0BEQ6|RS6_BURCM RecName: Full=30S ribosomal protein S6
gi|166226812|sp|A4JEV1|RS6_BURVG RecName: Full=30S ribosomal protein S6
gi|226703430|sp|B1YRJ4|RS6_BURA4 RecName: Full=30S ribosomal protein S6
gi|115281850|gb|ABI87367.1| SSU ribosomal protein S6P [Burkholderia ambifaria AMMD]
gi|134139061|gb|ABO54804.1| SSU ribosomal protein S6P [Burkholderia vietnamiensis G4]
gi|170131642|gb|EDT00199.1| ribosomal protein S6 [Burkholderia ambifaria IOP40-10]
gi|171093123|gb|EDT38340.1| ribosomal protein S6 [Burkholderia ambifaria MEX-5]
gi|171993349|gb|ACB64268.1| ribosomal protein S6 [Burkholderia ambifaria MC40-6]
Length = 124
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 100
>gi|254248015|ref|ZP_04941336.1| Ribosomal protein S6 [Burkholderia cenocepacia PC184]
gi|124872791|gb|EAY64507.1| Ribosomal protein S6 [Burkholderia cenocepacia PC184]
Length = 133
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 10 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + E P+
Sbjct: 69 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPS 109
>gi|24375418|ref|NP_719461.1| 30S ribosomal protein S6 [Shewanella oneidensis MR-1]
gi|32171551|sp|Q8EAH2|RS6_SHEON RecName: Full=30S ribosomal protein S6
gi|24350259|gb|AAN56905.1|AE015825_4 ribosomal protein S6 [Shewanella oneidensis MR-1]
Length = 131
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ VLR++ + E SP + + +RD R R P
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKGAITEASP-MAKAKDERDSR--RGPA 116
Query: 119 -DRNVD 123
DR+ D
Sbjct: 117 GDRSYD 122
>gi|33593752|ref|NP_881396.1| 30S ribosomal protein S6 [Bordetella pertussis Tohama I]
gi|161609278|ref|NP_888459.2| 30S ribosomal protein S6 [Bordetella bronchiseptica RB50]
gi|161610393|ref|NP_884697.2| 30S ribosomal protein S6 [Bordetella parapertussis 12822]
gi|61215726|sp|Q7VV89|RS6_BORPE RecName: Full=30S ribosomal protein S6
gi|61215731|sp|Q7W7P8|RS6_BORPA RecName: Full=30S ribosomal protein S6
gi|61215737|sp|Q7WL35|RS6_BORBR RecName: Full=30S ribosomal protein S6
gi|33563825|emb|CAE43069.1| 30s ribosomal protein s6 [Bordetella pertussis Tohama I]
gi|332383154|gb|AEE68001.1| 30S ribosomal protein S6 [Bordetella pertussis CS]
Length = 126
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ G V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQSGTVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ R ++ VLR L + +P++ ++ +R
Sbjct: 60 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAPAAPSIMMKSVER 108
>gi|330445013|ref|ZP_08308667.1| ribosomal protein S6 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493131|dbj|GAA03164.1| ribosomal protein S6 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 128
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V MN+ + + + E++ R ++ V+R++ + + E SP + + R DR
Sbjct: 60 VLMNVEAEQSVVDELESNFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDR 116
>gi|254525258|ref|ZP_05137313.1| 30S ribosomal protein S6 [Stenotrophomonas sp. SKA14]
gi|219722849|gb|EED41374.1| 30S ribosomal protein S6 [Stenotrophomonas sp. SKA14]
Length = 145
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ D S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV M
Sbjct: 5 YEIVFMVHPD-QSEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLM 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI + A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 64 NIEADQAVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDK 113
>gi|253991545|ref|YP_003042901.1| 30S ribosomal protein S6 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638423|emb|CAR67045.1| 30s ribosomal protein s6 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782995|emb|CAQ86160.1| 30s ribosomal protein s6 [Photorhabdus asymbiotica]
Length = 131
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P A+ E++ R ++ V+RS+ + V + ++ D D D
Sbjct: 60 VLMNVEAPQEAVDELETNFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRSRDYSLEDA 119
Query: 121 NVDRKQ 126
VD ++
Sbjct: 120 GVDAEE 125
>gi|89075974|ref|ZP_01162346.1| 30S ribosomal protein S6 [Photobacterium sp. SKA34]
gi|89048323|gb|EAR53902.1| 30S ribosomal protein S6 [Photobacterium sp. SKA34]
Length = 129
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V MN+ + + + E++ R ++ V+R++ + + E SP + + R DR
Sbjct: 60 VLMNVEAEQSVVDELESSFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDR 116
>gi|269959108|ref|YP_003328897.1| 30S ribosomal protein S6 [Anaplasma centrale str. Israel]
gi|269848939|gb|ACZ49583.1| 30S ribosomal protein S6 [Anaplasma centrale str. Israel]
Length = 109
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 1 MPIYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
M I + P+A+ E +RK+R++E+VLR L L VD
Sbjct: 61 CMMYIRADPSAMDEFRRKVRLNEDVLRFLCLKVD 94
>gi|237745858|ref|ZP_04576338.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS]
gi|229377209|gb|EEO27300.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS]
Length = 125
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKNSVTSRGGKIHRVEDWGRRQLAYMINKFAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI ++E++ + ++ +LR LT+ + E P+ ++ +++
Sbjct: 60 VLMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEE 110
>gi|198243986|ref|YP_002218272.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226695124|sp|B5FSA1|RS6_SALDC RecName: Full=30S ribosomal protein S6
gi|197938502|gb|ACH75835.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326626078|gb|EGE32423.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 131
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPCMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|148981038|ref|ZP_01816258.1| 30S ribosomal protein S6 [Vibrionales bacterium SWAT-3]
gi|145961014|gb|EDK26337.1| 30S ribosomal protein S6 [Vibrionales bacterium SWAT-3]
Length = 129
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + I E++ R ++ VLR++ + ++ +++ +++R +R PR
Sbjct: 60 VLMNVEAGQEVIDELETAFRFNDAVLRNMIMRTKGAVTEQSIMLKQ--KEERAERAPR 115
>gi|90581366|ref|ZP_01237162.1| 30S ribosomal protein S6 [Vibrio angustum S14]
gi|90437476|gb|EAS62671.1| 30S ribosomal protein S6 [Vibrio angustum S14]
Length = 129
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V MN+ + + + E++ R ++ V+R++ + + E SP + + R DR
Sbjct: 60 VLMNVEAEQSVVDELESNFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDR 116
>gi|119947022|ref|YP_944702.1| ribosomal protein S6 [Psychromonas ingrahamii 37]
gi|166227370|sp|A1T038|RS6_PSYIN RecName: Full=30S ribosomal protein S6
gi|119865626|gb|ABM05103.1| SSU ribosomal protein S6P [Psychromonas ingrahamii 37]
Length = 133
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I E GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVNGMIERYTASITEAGGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPR 118
V MNI + I +++ R +++V+R++ + + ++ + R +R +R R PR
Sbjct: 60 VLMNIEAGQNVIDDLENAFRFNDSVIRNMIMRTKTAVTEVSVVAKAREERVERAPRAPR 118
>gi|49076654|gb|AAT49585.1| PA4935 [synthetic construct]
Length = 140
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ A+ E++ R ++ V+R+L + D EQS L
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEML 103
>gi|302343162|ref|YP_003807691.1| ribosomal protein S6 [Desulfarculus baarsii DSM 2075]
gi|301639775|gb|ADK85097.1| ribosomal protein S6 [Desulfarculus baarsii DSM 2075]
Length = 141
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ + + +++ +++++G E+ V+ G R +AY+++K K ++
Sbjct: 1 MRHYETIFIIDPELPEDECSAVVDKFKGILEKDGSEMVKVDLWGRRRLAYQVKKYTKGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + PA + E++R +IDE V+R L++
Sbjct: 61 VLFEYGAKPAVVDELERNFKIDERVIRFLSV 91
>gi|254430452|ref|ZP_05044155.1| ribosomal protein S6 [Cyanobium sp. PCC 7001]
gi|197624905|gb|EDY37464.1| ribosomal protein S6 [Cyanobium sp. PCC 7001]
Length = 119
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI ++++ I +Y+ L+ E GGEV G R +AY I K+R+ YV +
Sbjct: 6 YETMYILRPDIPEEEVESHITKYRDLVIEAGGEVLDCQMRGKRRLAYSIDKHREGIYVQL 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
N + ++R MR+ E+V+R LT+ D +P
Sbjct: 66 NHNGDGQQVAPLERAMRLSEDVIRYLTVKQDGPMPAP 102
>gi|254244174|ref|ZP_04937496.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 2192]
gi|126197552|gb|EAZ61615.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 2192]
Length = 139
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLKDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ A+ E++ R ++ V+R+L + D EQS L
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEML 103
>gi|302552667|ref|ZP_07305009.1| ribosomal protein S6 [Streptomyces viridochromogenes DSM 40736]
gi|302470285|gb|EFL33378.1| ribosomal protein S6 [Streptomyces viridochromogenes DSM 40736]
Length = 96
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDVEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|268592872|ref|ZP_06127093.1| ribosomal protein S6 [Providencia rettgeri DSM 1131]
gi|291311661|gb|EFE52114.1| ribosomal protein S6 [Providencia rettgeri DSM 1131]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ +P AI E++ R ++ V+RS+ +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVM 90
>gi|212709962|ref|ZP_03318090.1| hypothetical protein PROVALCAL_01013 [Providencia alcalifaciens
DSM 30120]
gi|212687371|gb|EEB46899.1| hypothetical protein PROVALCAL_01013 [Providencia alcalifaciens
DSM 30120]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ +P AI E++ R ++ V+RS+ +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVM 90
>gi|149918390|ref|ZP_01906880.1| ribosomal protein S6 [Plesiocystis pacifica SIR-1]
gi|149820690|gb|EDM80100.1| ribosomal protein S6 [Plesiocystis pacifica SIR-1]
Length = 183
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
+E +LR D + + I+ + + Q++ NGG ++ ++ G+RT+AY I+ RK Y+++
Sbjct: 19 FEVTMILRPDTNKEGIQSLVARIQAIFDSNGGRMQKIDNWGLRTLAYPIQSQRKGIYLYV 78
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ E++R RI V+R LT++VD +
Sbjct: 79 RFLGGSDMVKELERNFRIYPEVVRYLTVMVDEN 111
>gi|15600128|ref|NP_253622.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PAO1]
gi|107104034|ref|ZP_01367952.1| hypothetical protein PaerPA_01005107 [Pseudomonas aeruginosa PACS2]
gi|116053084|ref|YP_793403.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152985524|ref|YP_001350983.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PA7]
gi|218894030|ref|YP_002442899.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa LESB58]
gi|296391775|ref|ZP_06881250.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PAb1]
gi|313109937|ref|ZP_07795865.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 39016]
gi|13959534|sp|Q9HUM9|RS6_PSEAE RecName: Full=30S ribosomal protein S6
gi|122256903|sp|Q02F83|RS6_PSEAB RecName: Full=30S ribosomal protein S6
gi|166227366|sp|A6VD48|RS6_PSEA7 RecName: Full=30S ribosomal protein S6
gi|226695116|sp|B7V1Z8|RS6_PSEA8 RecName: Full=30S ribosomal protein S6
gi|9951214|gb|AAG08320.1|AE004906_8 30S ribosomal protein S6 [Pseudomonas aeruginosa PAO1]
gi|115588305|gb|ABJ14320.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150960682|gb|ABR82707.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PA7]
gi|218774258|emb|CAW30075.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa LESB58]
gi|310882367|gb|EFQ40961.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 39016]
Length = 139
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ A+ E++ R ++ V+R+L + D EQS L
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEML 103
>gi|119897009|ref|YP_932222.1| 30S ribosomal protein S6 [Azoarcus sp. BH72]
gi|166226799|sp|A1K3D0|RS6_AZOSB RecName: Full=30S ribosomal protein S6
gi|119669422|emb|CAL93335.1| RpsF protein [Azoarcus sp. BH72]
Length = 127
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKSIVTARNGQIHRLEDWGRRQLAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI A+ E++ + ++ VLR LT+ + +P+
Sbjct: 60 VLMNIECDGEALGELEHAFKFNDAVLRHLTIKMKKAVTTPS 100
>gi|88704451|ref|ZP_01102165.1| 30S ribosomal protein S6 [Congregibacter litoralis KT71]
gi|88701502|gb|EAQ98607.1| 30S ribosomal protein S6 [Congregibacter litoralis KT71]
Length = 150
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I ++GG V + + G R +A+ I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTNTITKDGGSVHRLEDWGRRQLAFPIAKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRF 116
+ MN+ + A+ E+ R ++ V+R+L + D E+SP + ++ R +R R+
Sbjct: 60 ILMNVEASNEAMDELTTTFRYNDAVIRNLVIRRDEPVLEESPIMKAEKESR-ERKSRY 116
>gi|261345207|ref|ZP_05972851.1| ribosomal protein S6 [Providencia rustigianii DSM 4541]
gi|282566900|gb|EFB72435.1| ribosomal protein S6 [Providencia rustigianii DSM 4541]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ +P AI E++ R ++ V+RS+ +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVM 90
>gi|209750014|gb|ACI73314.1| 30S ribosomal subunit protein S6 [Escherichia coli]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV--DSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTRHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|237729129|ref|ZP_04559610.1| 30S ribosomal protein S6 [Citrobacter sp. 30_2]
gi|226908858|gb|EEH94776.1| 30S ribosomal protein S6 [Citrobacter sp. 30_2]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D + SEE
Sbjct: 119 ETADDAEAGDSEE 131
>gi|237748615|ref|ZP_04579095.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13]
gi|229379977|gb|EEO30068.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13]
Length = 121
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKNSVTTRGGKIHRVEDWGRRQLAYMINKFAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI ++E++ + ++ +LR LT+ + E P+ ++ +++
Sbjct: 60 VLMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEE 110
>gi|169351668|ref|ZP_02868606.1| hypothetical protein CLOSPI_02449 [Clostridium spiroforme DSM
1552]
gi|169291890|gb|EDS74023.1| hypothetical protein CLOSPI_02449 [Clostridium spiroforme DSM
1552]
Length = 93
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ + I +++++ NGG V V+E G+R +AY I+ +K YY
Sbjct: 1 MNKYEIMFIVKPDVEEEARNTLIENFKNILTANGGTVDNVDEWGLRDLAYEIQDFKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ A + E +R I+ ++LR LTL
Sbjct: 61 VVVDTTCTAADVAEFERLSNINSSMLRHLTL 91
>gi|152990908|ref|YP_001356630.1| 30S ribosomal protein S6 [Nitratiruptor sp. SB155-2]
gi|166227355|sp|A6Q464|RS6_NITSB RecName: Full=30S ribosomal protein S6
gi|151422769|dbj|BAF70273.1| 30S ribosomal protein S6 [Nitratiruptor sp. SB155-2]
Length = 128
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ ++ ++ K + +IQ NGGE+ +LG+R +AY I+K + +Y
Sbjct: 1 MRHYETLFVLKPTLTDEESKAKFEFIKEVIQNNGGEIVATEDLGVRKLAYPIQKFERGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P + E++R RI E+V+R LT+
Sbjct: 61 YIIYFTAPSHTVLELERIYRITEDVIRFLTI 91
>gi|285018510|ref|YP_003376221.1| 30s ribosomal subunit protein s6 [Xanthomonas albilineans GPE PC73]
gi|283473728|emb|CBA16231.1| probable 30s ribosomal subunit protein s6 [Xanthomonas albilineans]
Length = 144
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SL++ GG + + + G R +AY I+ KA+YV +
Sbjct: 5 YEIVFLVHPD-QSEQVPAMIERYKSLVENGGGTIHRLEDWGRRQLAYPIQNLVKAHYVML 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLAIKRDGADTEQSLIMK--SKDEKGDK 113
>gi|134095347|ref|YP_001100422.1| 30S ribosomal protein S6 [Herminiimonas arsenicoxydans]
gi|166226972|sp|A4G712|RS6_HERAR RecName: Full=30S ribosomal protein S6
gi|133739250|emb|CAL62299.1| 30S ribosomal subunit protein S6 [Herminiimonas arsenicoxydans]
Length = 122
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTARGGVVHRVEDWGRRQMAYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR LT+ + E +P+ ++ ++D
Sbjct: 60 VCLNIECDGETLTEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKED 110
>gi|152981661|ref|YP_001352991.1| 30S ribosomal protein S6 [Janthinobacterium sp. Marseille]
gi|166226973|sp|A6SXJ4|RS6_JANMA RecName: Full=30S ribosomal protein S6
gi|151281738|gb|ABR90148.1| small subunit ribosomal protein S6 [Janthinobacterium sp.
Marseille]
Length = 122
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG + V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTARGGVIHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR LT+ + E +P+ ++ ++D
Sbjct: 60 VCLNIECDGETLAEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKED 110
>gi|120435463|ref|YP_861149.1| 30S ribosomal protein S6 [Gramella forsetii KT0803]
gi|166226968|sp|A0M0D7|RS6_GRAFK RecName: Full=30S ribosomal protein S6
gi|117577613|emb|CAL66082.1| 30S ribosomal protein S6 [Gramella forsetii KT0803]
Length = 112
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +Y+ + G E+ + G+R +AY I+ + +Y
Sbjct: 1 MNNYETVFILNPVLSDEQIKETVKKYEDFLVSKGAEMVAKEDWGLRKLAYAIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P AI ++ + R +E ++R LT+ +D H
Sbjct: 61 HLFEYKAPGDAIEPLELEFRREERMMRYLTVKLDKH 96
>gi|295133965|ref|YP_003584641.1| 30S ribosomal protein S6 [Zunongwangia profunda SM-A87]
gi|294981980|gb|ADF52445.1| 30S ribosomal protein S6 [Zunongwangia profunda SM-A87]
Length = 112
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +Y+ + G E+ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDEQIKETVKKYEEFLVSKGAEMVSKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P AI ++ R DE ++R LT+ +D H
Sbjct: 61 HLFEFKAPGEAIEPLELAFRRDERMMRYLTVKLDKH 96
>gi|319941488|ref|ZP_08015816.1| 30S ribosomal protein S6 [Sutterella wadsworthensis 3_1_45B]
gi|319805108|gb|EFW01938.1| 30S ribosomal protein S6 [Sutterella wadsworthensis 3_1_45B]
Length = 128
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S+Q+ I +Y++L+ E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEICIVVHPD-QSEQVPAMIERYKTLVAEQGGKIHRIEDWGRRPLAYPIEKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V +NI I E++ R ++ VLR LT+ E +P+
Sbjct: 60 VLLNIECGHETILEIENGFRFNDAVLRHLTVKTKHAETAPS 100
>gi|188495956|ref|ZP_03003226.1| ribosomal protein S6 [Escherichia coli 53638]
gi|194439549|ref|ZP_03071623.1| ribosomal protein S6 [Escherichia coli 101-1]
gi|253775175|ref|YP_003038006.1| 30S ribosomal protein S6 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254164129|ref|YP_003047237.1| 30S ribosomal protein S6 [Escherichia coli B str. REL606]
gi|256025135|ref|ZP_05439000.1| 30S ribosomal protein S6 [Escherichia sp. 4_1_40B]
gi|297519432|ref|ZP_06937818.1| 30S ribosomal protein S6 [Escherichia coli OP50]
gi|300928017|ref|ZP_07143570.1| ribosomal protein S6 [Escherichia coli MS 187-1]
gi|301028023|ref|ZP_07191307.1| ribosomal protein S6 [Escherichia coli MS 196-1]
gi|301646648|ref|ZP_07246514.1| ribosomal protein S6 [Escherichia coli MS 146-1]
gi|188491155|gb|EDU66258.1| ribosomal protein S6 [Escherichia coli 53638]
gi|194421548|gb|EDX37561.1| ribosomal protein S6 [Escherichia coli 101-1]
gi|242379721|emb|CAQ34546.1| 30S ribosomal subunit protein S6, subunit of 30S ribosomal subunit
and ribosome [Escherichia coli BL21(DE3)]
gi|253326219|gb|ACT30821.1| ribosomal protein S6 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253976030|gb|ACT41701.1| 30S ribosomal protein S6 [Escherichia coli B str. REL606]
gi|253980186|gb|ACT45856.1| 30S ribosomal protein S6 [Escherichia coli BL21(DE3)]
gi|299878933|gb|EFI87144.1| ribosomal protein S6 [Escherichia coli MS 196-1]
gi|300463968|gb|EFK27461.1| ribosomal protein S6 [Escherichia coli MS 187-1]
gi|301075195|gb|EFK90001.1| ribosomal protein S6 [Escherichia coli MS 146-1]
gi|323940119|gb|EGB36313.1| ribosomal protein S6 [Escherichia coli E482]
gi|323970545|gb|EGB65804.1| ribosomal protein S6 [Escherichia coli TA007]
Length = 131
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDADAGDSEE 131
>gi|225873663|ref|YP_002755122.1| ribosomal protein S6 [Acidobacterium capsulatum ATCC 51196]
gi|254765214|sp|C1F904|RS6_ACIC5 RecName: Full=30S ribosomal protein S6
gi|225792352|gb|ACO32442.1| ribosomal protein S6 [Acidobacterium capsulatum ATCC 51196]
Length = 141
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 57/97 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D++ +++ I + + GG +R ++G R +AY +RK + Y+
Sbjct: 3 RFYEVMFIVRPDLAEEEVDKIIASLEQTVTNGGGTIRSTEKMGRRKLAYLVRKFSEGNYI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + + E++R++R+ E V++ +T+ +D E+
Sbjct: 63 LLTVDADGPLVAELERRLRVTEQVIKFITVRMDEEEK 99
>gi|319763796|ref|YP_004127733.1| ribosomal protein s6 [Alicycliphilus denitrificans BC]
gi|330823940|ref|YP_004387243.1| 30S ribosomal protein S6 [Alicycliphilus denitrificans K601]
gi|317118357|gb|ADV00846.1| ribosomal protein S6 [Alicycliphilus denitrificans BC]
gi|329309312|gb|AEB83727.1| ribosomal protein S6 [Alicycliphilus denitrificans K601]
Length = 124
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGQVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|294630310|ref|ZP_06708870.1| 30S ribosomal protein S6 [Streptomyces sp. e14]
gi|292833643|gb|EFF91992.1| 30S ribosomal protein S6 [Streptomyces sp. e14]
Length = 96
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|262275144|ref|ZP_06052955.1| SSU ribosomal protein S6p [Grimontia hollisae CIP 101886]
gi|262221707|gb|EEY73021.1| SSU ribosomal protein S6p [Grimontia hollisae CIP 101886]
Length = 131
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+E+GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKESGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ + + I E++ R ++ V+R++ + P++ ++
Sbjct: 60 VLMNVEAEQSVIDELETAFRFNDAVIRNMIMRTKGAITEPSVMMK 104
>gi|288941716|ref|YP_003443956.1| 30S ribosomal protein S6 [Allochromatium vinosum DSM 180]
gi|288897088|gb|ADC62924.1| ribosomal protein S6 [Allochromatium vinosum DSM 180]
Length = 130
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ S+Q+ I +YQ +++ GG V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPS-QSEQVPGMIERYQGSLEKRGGVVHRCEDWGRRPLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MN+ AI E+ R ++ VLR+L + D+ P+
Sbjct: 60 VLMNVECDQEAIDELANAFRFNDVVLRNLIIQRDAAVTEPS 100
>gi|146283970|ref|YP_001174123.1| 30S ribosomal protein S6 [Pseudomonas stutzeri A1501]
gi|166227369|sp|A4VQN0|RS6_PSEU5 RecName: Full=30S ribosomal protein S6
gi|145572175|gb|ABP81281.1| ribosomal protein S6 [Pseudomonas stutzeri A1501]
gi|327482298|gb|AEA85608.1| 30S ribosomal protein S6 [Pseudomonas stutzeri DSM 4166]
Length = 138
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V +N+ A+ E++ R ++ V+R+L + D EQS L
Sbjct: 60 VMLNVECSGKALAELEDNFRYNDAVIRNLIIRRDEAVTEQSEML 103
>gi|167625581|ref|YP_001675875.1| 30S ribosomal protein S6 [Shewanella halifaxensis HAW-EB4]
gi|189045495|sp|B0TUU9|RS6_SHEHH RecName: Full=30S ribosomal protein S6
gi|167355603|gb|ABZ78216.1| ribosomal protein S6 [Shewanella halifaxensis HAW-EB4]
Length = 137
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR 112
V +N+ + A+ E++ R ++ VLRS+ + + E SP + + +RD R
Sbjct: 60 VLLNVETTAEAVEELETAFRFNDAVLRSMVMRTKAAITEASP-MAKAKDERDTR 112
>gi|90020704|ref|YP_526531.1| 30S ribosomal protein S6 [Saccharophagus degradans 2-40]
gi|123277536|sp|Q21LW0|RS6_SACD2 RecName: Full=30S ribosomal protein S6
gi|89950304|gb|ABD80319.1| SSU ribosomal protein S6P [Saccharophagus degradans 2-40]
Length = 152
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y + ++++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMVERYTAAVKDSGGAVHRLEDWGRRQMAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
+ MN+ + E+ R ++ VLR++ + D E+SP +
Sbjct: 60 ILMNVECGEEVLEELTTNFRYNDAVLRNMIIRCDEAVTEESPIM 103
>gi|117929340|ref|YP_873891.1| SSU ribosomal protein S6P [Acidothermus cellulolyticus 11B]
gi|166226791|sp|A0LWU5|RS6_ACIC1 RecName: Full=30S ribosomal protein S6
gi|117649803|gb|ABK53905.1| SSU ribosomal protein S6P [Acidothermus cellulolyticus 11B]
Length = 96
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 57/88 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL D+ + ++ ++ Q+ ++++++GG V+ ++ G R +AY IRK + Y
Sbjct: 1 MRHYELMVLLDPDVEERSVEPSLDQFLNVVRQDGGTVQKIDVWGRRRLAYEIRKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + P + E+ R++ ++ENVLR+
Sbjct: 61 AVIDLIANPQTVKELDRQLNLNENVLRT 88
>gi|82703072|ref|YP_412638.1| 30S ribosomal protein S6 [Nitrosospira multiformis ATCC 25196]
gi|91207923|sp|Q2Y7M5|RS6_NITMU RecName: Full=30S ribosomal protein S6
gi|82411137|gb|ABB75246.1| SSU ribosomal protein S6P [Nitrosospira multiformis ATCC 25196]
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ G+V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVSAMIERYRNIVTARNGQVHRLEDWGRRQLAYLIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ +LR LTL +D +P+
Sbjct: 60 VLMNIECDQETLDELEHAFKFNDAILRHLTLKMDEPVTAPS 100
>gi|113477336|ref|YP_723397.1| 30S ribosomal protein S6 [Trichodesmium erythraeum IMS101]
gi|123351920|sp|Q10XV0|RS6_TRIEI RecName: Full=30S ribosomal protein S6
gi|110168384|gb|ABG52924.1| SSU ribosomal protein S6P [Trichodesmium erythraeum IMS101]
Length = 117
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D++ ++++ I +Y+S+++E G + G +AY I R+ Y+
Sbjct: 5 IYETMYILRPDMTEEKVEQAITKYKSMLEEQGAYDIKIQHRGKLRLAYEINNQREGIYIQ 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN PP I ++R MR+ E V+R LT+
Sbjct: 65 MNYQGPPTQIAILERAMRLSEEVIRYLTV 93
>gi|33566505|emb|CAE37761.1| 30s ribosomal protein s6 [Bordetella parapertussis]
gi|33568499|emb|CAE32411.1| 30s ribosomal protein s6 [Bordetella bronchiseptica RB50]
Length = 157
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ G V + + G R +AY I+K KA+Y
Sbjct: 32 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQSGTVHRLEDWGRRQLAYPIQKLVKAHY 90
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ R ++ VLR L + +P++ ++ +R
Sbjct: 91 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAPAAPSIMMKSVER 139
>gi|289810179|ref|ZP_06540808.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 123
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ +P I E++ R ++ V+RS+ + E SP + + R+ R+D
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDD 115
>gi|37528392|ref|NP_931737.1| 30S ribosomal protein S6 [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|61216269|sp|Q7MYU7|RS6_PHOLL RecName: Full=30S ribosomal protein S6
gi|36787830|emb|CAE16945.1| 30S ribosomal protein S6 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 131
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ V+RS+ + V + ++ D D D
Sbjct: 60 VLMNVEAPQEVIDELETNFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRSRDYSLEDA 119
Query: 121 NVDRKQ 126
N+D ++
Sbjct: 120 NMDAEE 125
>gi|330984551|gb|EGH82654.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 141
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECAGKALAELEDNFRYNDAVIRNLVI 90
>gi|296100963|ref|YP_003611109.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055422|gb|ADF60160.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295098347|emb|CBK87437.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 131
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDSDAGDSEE 131
>gi|332800525|ref|YP_004462024.1| 30S ribosomal protein S6 [Tepidanaerobacter sp. Re1]
gi|332698260|gb|AEE92717.1| 30S ribosomal protein S6 [Tepidanaerobacter sp. Re1]
Length = 95
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ + + ++K + +++ +I++ GGEV V+E G +AY I R+ +Y
Sbjct: 1 MRQYETVFIIDPEFEADEVKALVEKFKGMIEDQGGEVTEVDEWGKLRLAYPINDKREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + PA +++R +I ++R L +
Sbjct: 61 FLMNFTANPATAQDLERVYKITNGLMRYLII 91
>gi|284049976|ref|ZP_06380186.1| 30S ribosomal protein S6 [Arthrospira platensis str. Paraca]
gi|291568137|dbj|BAI90409.1| 30S ribosomal protein S6 [Arthrospira platensis NIES-39]
Length = 116
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D++ +Q++ I +YQ ++ E+G + V LG R +AY I K+R+ Y+
Sbjct: 5 VYETMYILRSDLNDEQVEAAIAKYQDILHEHGAQNLDVQNLGKRRLAYDIDKHREGIYIQ 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
MN + I M+R MRI +V+R LT+ D
Sbjct: 65 MNYEGGDSNQIKVMERAMRIGGDVIRYLTIKQD 97
>gi|153875702|ref|ZP_02003385.1| Ribosomal protein S6 [Beggiatoa sp. PS]
gi|152067834|gb|EDN66615.1| Ribosomal protein S6 [Beggiatoa sp. PS]
Length = 125
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D + Q+ I +YQ++I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QTDQVAAMIERYQAIIKEQDGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V MN+ A+ E+ R ++ V+R L L+
Sbjct: 60 VLMNVECNIKALDELVENFRFNDAVIRHLVLI 91
>gi|145588607|ref|YP_001155204.1| 30S ribosomal protein S6 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189045486|sp|A4SVX6|RS6_POLSQ RecName: Full=30S ribosomal protein S6
gi|145047013|gb|ABP33640.1| SSU ribosomal protein S6P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKATLAAAGGKIHRIEDWGRRQMAYMIDKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + E P++ ++ R++
Sbjct: 60 VCMNIECDQKTLEELEHAFKFNDAVLRHLIIKTKKAETEPSIMMKEVQREE 110
>gi|28899514|ref|NP_799119.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus RIMD 2210633]
gi|91227277|ref|ZP_01261702.1| 30S ribosomal protein S6 [Vibrio alginolyticus 12G01]
gi|260366345|ref|ZP_05778791.1| ribosomal protein S6 [Vibrio parahaemolyticus K5030]
gi|260879408|ref|ZP_05891763.1| ribosomal protein S6 [Vibrio parahaemolyticus AN-5034]
gi|260896873|ref|ZP_05905369.1| ribosomal protein S6 [Vibrio parahaemolyticus Peru-466]
gi|260902021|ref|ZP_05910416.1| ribosomal protein S6 [Vibrio parahaemolyticus AQ4037]
gi|262393105|ref|YP_003284959.1| 30S ribosomal protein S6p [Vibrio sp. Ex25]
gi|269964442|ref|ZP_06178683.1| 30S ribosomal protein S6 [Vibrio alginolyticus 40B]
gi|31340374|sp|Q87L72|RS6_VIBPA RecName: Full=30S ribosomal protein S6
gi|28807750|dbj|BAC61003.1| ribosomal protein S6 [Vibrio parahaemolyticus RIMD 2210633]
gi|91188671|gb|EAS74960.1| 30S ribosomal protein S6 [Vibrio alginolyticus 12G01]
gi|262336699|gb|ACY50494.1| SSU ribosomal protein S6p [Vibrio sp. Ex25]
gi|269830780|gb|EEZ84998.1| 30S ribosomal protein S6 [Vibrio alginolyticus 40B]
gi|308086291|gb|EFO35986.1| ribosomal protein S6 [Vibrio parahaemolyticus Peru-466]
gi|308089677|gb|EFO39372.1| ribosomal protein S6 [Vibrio parahaemolyticus AN-5034]
gi|308109423|gb|EFO46963.1| ribosomal protein S6 [Vibrio parahaemolyticus AQ4037]
gi|308112696|gb|EFO50236.1| ribosomal protein S6 [Vibrio parahaemolyticus K5030]
gi|328472353|gb|EGF43223.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus 10329]
Length = 129
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIM 90
>gi|288927612|ref|ZP_06421459.1| ribosomal protein S6 [Prevotella sp. oral taxon 317 str. F0108]
gi|288330446|gb|EFC69030.1| ribosomal protein S6 [Prevotella sp. oral taxon 317 str. F0108]
Length = 115
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T+ +++ L+ + G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDKGAEI--VNEEAWGLKKMAYAIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I ++ R DE V+R + + +D +
Sbjct: 59 FYCLLEFKAEPEVIKSLETGYRRDEKVIRHMVVKLDKY 96
>gi|239814824|ref|YP_002943734.1| 30S ribosomal protein S6 [Variovorax paradoxus S110]
gi|259495368|sp|C5CUP0|RS6_VARPS RecName: Full=30S ribosomal protein S6
gi|239801401|gb|ACS18468.1| ribosomal protein S6 [Variovorax paradoxus S110]
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ LI GG+V V + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGLITAGGGKVHRVEDWGRRQLAYQINKLSKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEAEQTVMGELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|300727907|ref|ZP_07061285.1| ribosomal protein S6 [Prevotella bryantii B14]
gi|299774749|gb|EFI71363.1| ribosomal protein S6 [Prevotella bryantii B14]
Length = 113
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ ++ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKKVLTDNGAEILNEEAWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P +++++ R DE V+R +T+ +D +
Sbjct: 61 CLVEFKGEPTLVNKLETAYRRDEKVIRYITVKLDKY 96
>gi|300721498|ref|YP_003710773.1| 30S ribosomal subunit protein S6 [Xenorhabdus nematophila ATCC
19061]
gi|297627990|emb|CBJ88539.1| 30S ribosomal subunit protein S6 [Xenorhabdus nematophila ATCC
19061]
Length = 132
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V +N+ +P AI E++ R ++ V+RS+ + V
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRV 92
>gi|226942912|ref|YP_002797985.1| 30S ribosomal protein S6 [Azotobacter vinelandii DJ]
gi|259495325|sp|C1DLR2|RS6_AZOVD RecName: Full=30S ribosomal protein S6
gi|226717839|gb|ACO77010.1| 30S ribosomal protein S6 [Azotobacter vinelandii DJ]
Length = 136
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VLINVECSGKALSELEDNFRYNDAVIRNLVI 90
>gi|167755262|ref|ZP_02427389.1| hypothetical protein CLORAM_00767 [Clostridium ramosum DSM 1402]
gi|237735010|ref|ZP_04565491.1| 30S ribosomal protein S6 [Mollicutes bacterium D7]
gi|167705312|gb|EDS19891.1| hypothetical protein CLORAM_00767 [Clostridium ramosum DSM 1402]
gi|229381786|gb|EEO31877.1| 30S ribosomal protein S6 [Coprobacillus sp. D7]
Length = 93
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ I ++ ++ NGG V V+E G+R +AY I+ +K YY
Sbjct: 1 MNKYEIMFIVKPDVEDDARNALIESFKGILTANGGTVDNVDEWGLRDLAYEIKDYKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ A + E +R I+ ++LR LTL
Sbjct: 61 VVVDATCTAADVAEFERLSNINASMLRHLTL 91
>gi|262148953|ref|ZP_06028101.1| SSU ribosomal protein S6p [Vibrio cholerae INDRE 91/1]
gi|262031264|gb|EEY49880.1| SSU ribosomal protein S6p [Vibrio cholerae INDRE 91/1]
Length = 102
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MN+ + A + E++ R ++ VLR++ + + P+
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPS 100
>gi|196249875|ref|ZP_03148571.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
gi|196210751|gb|EDY05514.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
Length = 95
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++E G E+ V + G R +AY I K R YY
Sbjct: 1 MRKYEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ + P A+ E R RI E+++R + +
Sbjct: 61 MILNVMAEPQAVQEFDRLARISEDIIRHIVV 91
>gi|328954271|ref|YP_004371605.1| 30S ribosomal protein S6 [Desulfobacca acetoxidans DSM 11109]
gi|328454595|gb|AEB10424.1| 30S ribosomal protein S6 [Desulfobacca acetoxidans DSM 11109]
Length = 153
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLI-QENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE +F++ D+ + I ++ ++ +NG +++L + G R +AY+I+K + Y
Sbjct: 1 MNRYETIFIINPDLGDDETHSVIDKFTGIVGAQNGVQLKL-EDWGRRRLAYKIKKFHQGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
YV ++ A PA + E +R ++ID+ +LR L++
Sbjct: 60 YVLLDFAGVPAGLAEFERNLKIDDRILRFLSV 91
>gi|133976|sp|P02358|RS6_ECOLI RecName: Full=30S ribosomal protein S6; Contains: RecName: Full=30S
ribosomal protein S6, fully modified isoform; Contains:
RecName: Full=30S ribosomal protein S6, non-modified
isoform
gi|33357883|pdb|1P6G|F Chain F, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357960|pdb|1P87|F Chain F, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754044|pdb|2AVY|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|83754100|pdb|2AW7|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
gi|116666553|pdb|1VS5|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116666605|pdb|1VS7|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138058|pdb|2I2P|F Chain F, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138129|pdb|2I2U|F Chain F, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|157836028|pdb|2QOU|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s Ribosome,
With Spectinomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|157836079|pdb|2QOW|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836132|pdb|2QOY|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836183|pdb|2QP0|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429703|pdb|2QAL|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429755|pdb|2QAN|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429813|pdb|2QB9|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429865|pdb|2QBB|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429917|pdb|2QBD|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429969|pdb|2QBF|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430023|pdb|2QBH|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430076|pdb|2QBJ|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431376|pdb|2Z4K|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431429|pdb|2Z4M|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|168988793|pdb|2VHO|F Chain F, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988814|pdb|2VHP|F Chain F, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107283|pdb|3DF1|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|197107335|pdb|3DF3|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|256032368|pdb|3E1A|T Chain T, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032425|pdb|3E1C|T Chain T, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|257097327|pdb|3I1M|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097379|pdb|3I1O|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097431|pdb|3I1Q|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097485|pdb|3I1S|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097539|pdb|3I1Z|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097594|pdb|3I21|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560312|pdb|3KC4|F Chain F, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
gi|308198692|pdb|3OR9|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The First
70s Ribosome.
gi|308198713|pdb|3ORA|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634284|pdb|3IZV|J Chain J, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634309|pdb|3IZW|J Chain J, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|329665997|pdb|3J00|F Chain F, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 135
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ +P I E++ R ++ V+RS+ + E SP + + R+ R+D
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDD 115
>gi|254238350|ref|ZP_04931673.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa C3719]
gi|126170281|gb|EAZ55792.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa C3719]
Length = 139
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLKNWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ A+ E++ R ++ V+R+L + D EQS L
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEML 103
>gi|89900977|ref|YP_523448.1| 30S ribosomal protein S6 [Rhodoferax ferrireducens T118]
gi|123278761|sp|Q21WD6|RS6_RHOFD RecName: Full=30S ribosomal protein S6
gi|89345714|gb|ABD69917.1| SSU ribosomal protein S6P [Rhodoferax ferrireducens T118]
Length = 121
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ +I GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLVYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+L + P+ ++ +R+D
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVLKKKADTGPSSMMKTVERED 110
>gi|28872047|ref|NP_794666.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66043848|ref|YP_233689.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae
B728a]
gi|71736652|ref|YP_272876.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213967933|ref|ZP_03396079.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato T1]
gi|237798287|ref|ZP_04586748.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257482399|ref|ZP_05636440.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289624606|ref|ZP_06457560.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648618|ref|ZP_06479961.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
2250]
gi|289672602|ref|ZP_06493492.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae FF5]
gi|298484906|ref|ZP_07003005.1| SSU ribosomal protein S6p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|301383750|ref|ZP_07232168.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato Max13]
gi|302059275|ref|ZP_07250816.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato K40]
gi|302132343|ref|ZP_07258333.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302185449|ref|ZP_07262122.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae 642]
gi|32171518|sp|Q87VK3|RS6_PSESM RecName: Full=30S ribosomal protein S6
gi|75503617|sp|Q4ZYX1|RS6_PSEU2 RecName: Full=30S ribosomal protein S6
gi|91207931|sp|Q48NZ3|RS6_PSE14 RecName: Full=30S ribosomal protein S6
gi|28855300|gb|AAO58361.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|63254555|gb|AAY35651.1| Ribosomal protein S6 [Pseudomonas syringae pv. syringae B728a]
gi|71557205|gb|AAZ36416.1| ribosomal protein S6 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213927276|gb|EEB60825.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato T1]
gi|298160593|gb|EFI01615.1| SSU ribosomal protein S6p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320321874|gb|EFW77970.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331021|gb|EFW86995.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330865904|gb|EGH00613.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330872263|gb|EGH06412.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330873776|gb|EGH07925.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330886611|gb|EGH20272.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. mori str.
301020]
gi|330899905|gb|EGH31324.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330939889|gb|EGH43111.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. pisi str.
1704B]
gi|330951487|gb|EGH51747.1| 30S ribosomal protein S6 [Pseudomonas syringae Cit 7]
gi|330960079|gb|EGH60339.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330965991|gb|EGH66251.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330971570|gb|EGH71636.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|331009771|gb|EGH89827.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331014620|gb|EGH94676.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331021139|gb|EGI01196.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 141
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|163803109|ref|ZP_02196993.1| 30S ribosomal protein S6 [Vibrio sp. AND4]
gi|312881935|ref|ZP_07741692.1| 30S ribosomal protein S6 [Vibrio caribbenthicus ATCC BAA-2122]
gi|159173101|gb|EDP57933.1| 30S ribosomal protein S6 [Vibrio sp. AND4]
gi|309370371|gb|EFP97866.1| 30S ribosomal protein S6 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 126
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIM 90
>gi|297585578|ref|YP_003701358.1| 30S ribosomal protein S6 [Bacillus selenitireducens MLS10]
gi|297144035|gb|ADI00793.1| ribosomal protein S6 [Bacillus selenitireducens MLS10]
Length = 95
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ Q +K+T+ ++ +++ NG E+ E+G R +AY I +Y
Sbjct: 1 MRKYEIMYIVRPDLEEQAVKETVERFNTILTNNGAELTETKEMGKRRLAYEIEDFTDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + + A+ E R I++N+LRS+ +
Sbjct: 61 VLIQLNANKDALDEFNRLSSINDNILRSIIV 91
>gi|217967745|ref|YP_002353251.1| ribosomal protein S6 [Dictyoglomus turgidum DSM 6724]
gi|226703456|sp|B8E0J2|RS6_DICTD RecName: Full=30S ribosomal protein S6
gi|217336844|gb|ACK42637.1| ribosomal protein S6 [Dictyoglomus turgidum DSM 6724]
Length = 97
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++S + K Q IQ GGEV+ V+ G RT+AY ++K + YY
Sbjct: 1 MRKYEIMCLISPELSEEDFKTLYEGIQQDIQNLGGEVQNVDVWGKRTLAYPVKKFTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V MN P + E +R++++ E +LR + L++ E
Sbjct: 61 VVMNFLFPQTQLPEFERRLKLREKLLRYMITLLEKEE 97
>gi|325279431|ref|YP_004251973.1| 30S ribosomal protein S6 [Odoribacter splanchnicus DSM 20712]
gi|324311240|gb|ADY31793.1| 30S ribosomal protein S6 [Odoribacter splanchnicus DSM 20712]
Length = 116
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+ +S QQIK+ + ++++ I +NGG + G+R +AY I+K +Y +
Sbjct: 5 YETVFITTPVLSEQQIKEAVEKFKNTITDNGGTIEHEEAWGLRKLAYPIQKKTTGFYHLL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ A + +++ R DE V+R LT +D + TL
Sbjct: 65 QFEAEGALVDKLETAYRRDERVIRFLTFRLDKYAYEYTL 103
>gi|323493031|ref|ZP_08098166.1| 30S ribosomal protein S6 [Vibrio brasiliensis LMG 20546]
gi|323312729|gb|EGA65858.1| 30S ribosomal protein S6 [Vibrio brasiliensis LMG 20546]
Length = 126
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIM 90
>gi|116626135|ref|YP_828291.1| 30S ribosomal protein S6 [Candidatus Solibacter usitatus
Ellin6076]
gi|122251817|sp|Q01QR4|RS6_SOLUE RecName: Full=30S ribosomal protein S6
gi|116229297|gb|ABJ88006.1| SSU ribosomal protein S6P [Candidatus Solibacter usitatus
Ellin6076]
Length = 153
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +F+++ D S +++ + ++ + G V +++ G R +AYR+ K R+ YV
Sbjct: 3 RIYEELFIVKPDASDEEVDAFVETLRTQLTAAGATVDKIDKWGKRRLAYRVDKYREGTYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S P + E++R++R+ + VL+ LT+ +D
Sbjct: 63 LFQFTSEPTGVKELERRLRVSDIVLKFLTVRID 95
>gi|218441702|ref|YP_002380031.1| ribosomal protein S6 [Cyanothece sp. PCC 7424]
gi|226703448|sp|B7KD42|RS6_CYAP7 RecName: Full=30S ribosomal protein S6
gi|218174430|gb|ACK73163.1| ribosomal protein S6 [Cyanothece sp. PCC 7424]
Length = 176
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE V++LR D+ +Q++ I +Y+ + EN + + G R +AY I+K + +YV
Sbjct: 3 KSYEMVYILRPDLLEEQVQQEINRYRDFLTENEAQEVQIKYWGKRRLAYPIKKLQDGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
MN I ++R MR+ + V+R LT+ +D + +P ND P +
Sbjct: 63 QMNYQGDGKQIAPLERMMRLSDEVIRYLTIKLDKDQYTP------------NDSPPPEGI 110
Query: 122 VDRKQHVSE 130
+D + V E
Sbjct: 111 IDTPKPVIE 119
>gi|194366362|ref|YP_002028972.1| 30S ribosomal protein S6 [Stenotrophomonas maltophilia R551-3]
gi|226695133|sp|B4SP94|RS6_STRM5 RecName: Full=30S ribosomal protein S6
gi|194349166|gb|ACF52289.1| ribosomal protein S6 [Stenotrophomonas maltophilia R551-3]
Length = 145
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ D S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEIVFMVHPD-QSEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI + A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 64 NIEADQAVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMK--SKDEKGDK 113
>gi|169837077|ref|ZP_02870265.1| SSU ribosomal protein S6P [candidate division TM7 single-cell
isolate TM7a]
Length = 112
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE L+R D+ S I+ I + + ++++ GGE++ + G + +AY+IRK A Y
Sbjct: 1 MRKYELTVLIRPDLESD-IEAPINKVRDIVKKAGGEIKKEDNWGKKKLAYKIRKEDFAIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
V+M+I P A +++ + I E VLR L +L D Q
Sbjct: 60 VYMDIILPADAPLKIRNTLNITEEVLRYLLVLADEKTQ 97
>gi|26991557|ref|NP_746982.1| 30S ribosomal protein S6 [Pseudomonas putida KT2440]
gi|148549960|ref|YP_001270062.1| 30S ribosomal protein S6 [Pseudomonas putida F1]
gi|167035923|ref|YP_001671154.1| 30S ribosomal protein S6 [Pseudomonas putida GB-1]
gi|170723829|ref|YP_001751517.1| 30S ribosomal protein S6 [Pseudomonas putida W619]
gi|325271217|ref|ZP_08137762.1| 30S ribosomal protein S6 [Pseudomonas sp. TJI-51]
gi|32171520|sp|Q88DE8|RS6_PSEPK RecName: Full=30S ribosomal protein S6
gi|166227368|sp|A5W9R8|RS6_PSEP1 RecName: Full=30S ribosomal protein S6
gi|189045488|sp|B0KKY3|RS6_PSEPG RecName: Full=30S ribosomal protein S6
gi|226695117|sp|B1JAH1|RS6_PSEPW RecName: Full=30S ribosomal protein S6
gi|24986642|gb|AAN70446.1|AE016685_11 ribosomal protein S6 [Pseudomonas putida KT2440]
gi|148514018|gb|ABQ80878.1| SSU ribosomal protein S6P [Pseudomonas putida F1]
gi|166862411|gb|ABZ00819.1| ribosomal protein S6 [Pseudomonas putida GB-1]
gi|169761832|gb|ACA75148.1| ribosomal protein S6 [Pseudomonas putida W619]
gi|313500861|gb|ADR62227.1| RpsF [Pseudomonas putida BIRD-1]
gi|324103620|gb|EGC00922.1| 30S ribosomal protein S6 [Pseudomonas sp. TJI-51]
Length = 141
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|260775636|ref|ZP_05884533.1| SSU ribosomal protein S6p [Vibrio coralliilyticus ATCC BAA-450]
gi|260608817|gb|EEX34982.1| SSU ribosomal protein S6p [Vibrio coralliilyticus ATCC BAA-450]
Length = 126
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIM 90
>gi|15616612|ref|NP_244918.1| 30S ribosomal protein S6 [Bacillus halodurans C-125]
gi|11134348|sp|Q9K5N8|RS6_BACHD RecName: Full=30S ribosomal protein S6
gi|10176675|dbj|BAB07769.1| 30S ribosomal protein S6 [Bacillus halodurans C-125]
Length = 95
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I ++ ++ G E+ V E+G R +AY I K R+ YY
Sbjct: 1 MRKYEIMYIIAPNLEEAANKEIIERFNGVLTNQGAEIEKVEEMGKRRLAYEINKFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +N+ + AI E R ++I++NV+R L
Sbjct: 61 VLLNVKADADAIAEFNRLIKINDNVIRVL 89
>gi|299135704|ref|ZP_07028888.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX8]
gi|298601828|gb|EFI57982.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX8]
Length = 157
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 57/97 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D+ ++ + + + GG V+ ++G R +AY ++K +YV
Sbjct: 3 RTYEIMFIVRPDVEEAELDKLVETFSGYVTTGGGVVKTTEKMGRRRLAYTVQKFNDGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + +P + I E++R++R+ E V++ +T+ +D ++
Sbjct: 63 LLIVDAPASLISEIERRLRVSEPVIKFITVRMDEEDK 99
>gi|84393176|ref|ZP_00991940.1| 30S ribosomal protein S6 [Vibrio splendidus 12B01]
gi|86148224|ref|ZP_01066521.1| 30S ribosomal protein S6 [Vibrio sp. MED222]
gi|218708333|ref|YP_002415954.1| 30S ribosomal protein S6 [Vibrio splendidus LGP32]
gi|254765464|sp|B7VI65|RS6_VIBSL RecName: Full=30S ribosomal protein S6
gi|84376228|gb|EAP93112.1| 30S ribosomal protein S6 [Vibrio splendidus 12B01]
gi|85833994|gb|EAQ52155.1| 30S ribosomal protein S6 [Vibrio sp. MED222]
gi|218321352|emb|CAV17302.1| ribosomal protein S6 [Vibrio splendidus LGP32]
Length = 137
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + + E++ R ++ VLR++ + ++ +++ +++R +R PR
Sbjct: 60 VLMNVEAGQEVMDELETAFRFNDAVLRNMIMRTKGAVTEQSIMLKQ--KEERAERAPR 115
>gi|329913489|ref|ZP_08275958.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480]
gi|327545347|gb|EGF30582.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480]
Length = 122
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ + G V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKAVVAAHSGVVHRVEDWGRRQMAYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR LT+ + E +P+ ++ ++D
Sbjct: 60 VCMNIECDNETLVEIETGFKFNDAVLRHLTVKLKKAETAPSPMMKAVQKED 110
>gi|296113492|ref|YP_003627430.1| 30S ribosomal protein S6 [Moraxella catarrhalis RH4]
gi|295921186|gb|ADG61537.1| 30S ribosomal protein S6 [Moraxella catarrhalis RH4]
gi|326559387|gb|EGE09812.1| 30S ribosomal protein S6 [Moraxella catarrhalis 46P47B1]
gi|326559760|gb|EGE10170.1| 30S ribosomal protein S6 [Moraxella catarrhalis 7169]
gi|326565024|gb|EGE15224.1| 30S ribosomal protein S6 [Moraxella catarrhalis 103P14B1]
gi|326568101|gb|EGE18185.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC7]
gi|326568518|gb|EGE18590.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC1]
gi|326572421|gb|EGE22413.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC8]
gi|326572533|gb|EGE22522.1| 30S ribosomal protein S6 [Moraxella catarrhalis CO72]
gi|326574130|gb|EGE24078.1| 30S ribosomal protein S6 [Moraxella catarrhalis 101P30B1]
gi|326575566|gb|EGE25490.1| 30S ribosomal protein S6 [Moraxella catarrhalis O35E]
Length = 133
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ D + +Y+S++++NGG + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLLVHPD-QSNQVADMVTKYRSIVEDNGGNNHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V +NI + +++ + ++ ++RSL + D EQSP
Sbjct: 60 VLLNIECNDETLAQLEELFKYNDAIIRSLIIRRDEAITEQSP 101
>gi|241764687|ref|ZP_04762699.1| ribosomal protein S6 [Acidovorax delafieldii 2AN]
gi|241365857|gb|EER60506.1| ribosomal protein S6 [Acidovorax delafieldii 2AN]
Length = 125
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|300704318|ref|YP_003745921.1| 30S ribosomal protein S6 [Ralstonia solanacearum CFBP2957]
gi|299071982|emb|CBJ43312.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum CFBP2957]
Length = 122
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V +NI + E++ + ++ VLR L + E +P+
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPS 100
>gi|254507380|ref|ZP_05119515.1| ribosomal protein S6 [Vibrio parahaemolyticus 16]
gi|323496052|ref|ZP_08101112.1| 30S ribosomal protein S6 [Vibrio sinaloensis DSM 21326]
gi|219549636|gb|EED26626.1| ribosomal protein S6 [Vibrio parahaemolyticus 16]
gi|323318796|gb|EGA71747.1| 30S ribosomal protein S6 [Vibrio sinaloensis DSM 21326]
Length = 126
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIM 90
>gi|134301137|ref|YP_001114633.1| 30S ribosomal protein S6 [Desulfotomaculum reducens MI-1]
gi|189045464|sp|A4J9Q5|RS6_DESRM RecName: Full=30S ribosomal protein S6
gi|134053837|gb|ABO51808.1| SSU ribosomal protein S6P [Desulfotomaculum reducens MI-1]
Length = 95
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 59/91 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ ++ +++ + +++S+++E G EV +++ G R +AY I K ++ Y
Sbjct: 1 MRNYEVMYIIKPEVEEEKVTALMEKFKSVVEEKGAEVTKLDKWGKRRLAYEINKIKEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + PAA E+ R M+I+++++R + +
Sbjct: 61 VLMQFKAEPAASAELDRVMKINDDIVRHMII 91
>gi|197287186|ref|YP_002153058.1| 30S ribosomal protein S6 [Proteus mirabilis HI4320]
gi|227357120|ref|ZP_03841489.1| 30S ribosomal protein S6 [Proteus mirabilis ATCC 29906]
gi|226695115|sp|B4F275|RS6_PROMH RecName: Full=30S ribosomal protein S6
gi|194684673|emb|CAR46616.1| 30S ribosomal protein S6 [Proteus mirabilis HI4320]
gi|227162652|gb|EEI47619.1| 30S ribosomal protein S6 [Proteus mirabilis ATCC 29906]
Length = 131
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYKTAITNANGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVLRNMIM 90
>gi|291619077|ref|YP_003521819.1| RpsF [Pantoea ananatis LMG 20103]
gi|291154107|gb|ADD78691.1| RpsF [Pantoea ananatis LMG 20103]
gi|327395409|dbj|BAK12831.1| 30S ribosomal protein S6 RpsF [Pantoea ananatis AJ13355]
Length = 131
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + V + E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKNAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ESADDSDAGDSEE 131
>gi|261254039|ref|ZP_05946612.1| SSU ribosomal protein S6p [Vibrio orientalis CIP 102891]
gi|260937430|gb|EEX93419.1| SSU ribosomal protein S6p [Vibrio orientalis CIP 102891]
Length = 126
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ VLR++ +
Sbjct: 60 VLMNVEAGQAVIDELETAFRFNDAVLRNMIM 90
>gi|77456762|ref|YP_346267.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf0-1]
gi|91207934|sp|Q3KIX8|RS6_PSEPF RecName: Full=30S ribosomal protein S6
gi|77380765|gb|ABA72278.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf0-1]
Length = 142
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|329938666|ref|ZP_08288062.1| 30S ribosomal protein S6 [Streptomyces griseoaurantiacus M045]
gi|329302157|gb|EGG46049.1| 30S ribosomal protein S6 [Streptomyces griseoaurantiacus M045]
Length = 96
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDVEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPGVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|54778759|gb|AAV39593.1| ribosomal protein S6 [synthetic construct]
Length = 158
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+YV M
Sbjct: 28 YEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLM 86
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPRDRN 121
N+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F +
Sbjct: 87 NVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFANETA 145
Query: 122 VDRKQHVSEE 131
D + SEE
Sbjct: 146 DDAEAGDSEE 155
>gi|56416479|ref|YP_153553.1| 30S ribosomal protein S6 [Anaplasma marginale str. St. Maries]
gi|222474848|ref|YP_002563263.1| 30S ribosomal protein S6 (rpsF) [Anaplasma marginale str. Florida]
gi|56387711|gb|AAV86298.1| 30S ribosomal protein S6 [Anaplasma marginale str. St. Maries]
gi|222418984|gb|ACM49007.1| 30S ribosomal protein S6 (rpsF) [Anaplasma marginale str. Florida]
Length = 127
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 21 IYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHYCM 80
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
M I + PAA+ E +R++R++E+VLR L L VD
Sbjct: 81 MYIRAEPAAMDEFRRRVRLNEDVLRFLCLKVD 112
>gi|251772230|gb|EES52800.1| ribosomal protein S6 [Leptospirillum ferrodiazotrophum]
Length = 129
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V LL+ +S ++ + TI +Y+ ++++ GG + LG + +AY +RK +KA Y
Sbjct: 1 MYFYECVLLLKPTLSDEEAQATISRYEKIVEDKGGRLHATQRLGKKRLAYELRKEKKADY 60
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTL 91
V + PA E++R R+DE +++S+ L
Sbjct: 61 VILYAEFKNPADQIELERVARLDERIIKSMNL 92
>gi|71906855|ref|YP_284442.1| 30S ribosomal protein S6 [Dechloromonas aromatica RCB]
gi|91207911|sp|Q47GQ9|RS6_DECAR RecName: Full=30S ribosomal protein S6
gi|71846476|gb|AAZ45972.1| SSU ribosomal protein S6P [Dechloromonas aromatica RCB]
Length = 127
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ + +Y++++ GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEICFIVHPD-QSEQVPGMVERYRAIVTAKGGSIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI ++E++ + ++ VLR LT+ + + +P+
Sbjct: 60 VLMNIECDGDTLNELEHSFKFNDAVLRHLTVKMKAAVTTPS 100
>gi|326566024|gb|EGE16184.1| 30S ribosomal protein S6 [Moraxella catarrhalis 12P80B1]
Length = 133
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ D + +Y+S++++NGG + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLLVHPD-QSNQVADMVTKYRSIVEDNGGNNHRLEDWGRRQLAYPISKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V +NI + +++ + ++ ++RSL + D EQSP
Sbjct: 60 VLLNIECNDETLAQLEELFKYNDAIIRSLIIRRDEAITEQSP 101
>gi|127514212|ref|YP_001095409.1| 30S ribosomal protein S6 [Shewanella loihica PV-4]
gi|166227383|sp|A3QI52|RS6_SHELP RecName: Full=30S ribosomal protein S6
gi|126639507|gb|ABO25150.1| SSU ribosomal protein S6P [Shewanella loihica PV-4]
Length = 135
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + ++ E++ R ++ VLRS+ +
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRSMVM 90
>gi|146305680|ref|YP_001186145.1| 30S ribosomal protein S6 [Pseudomonas mendocina ymp]
gi|330501634|ref|YP_004378503.1| 30S ribosomal protein S6 [Pseudomonas mendocina NK-01]
gi|166227367|sp|A4XPZ7|RS6_PSEMY RecName: Full=30S ribosomal protein S6
gi|145573881|gb|ABP83413.1| SSU ribosomal protein S6P [Pseudomonas mendocina ymp]
gi|328915920|gb|AEB56751.1| 30S ribosomal protein S6 [Pseudomonas mendocina NK-01]
Length = 140
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|308179154|ref|YP_003918560.1| 30S ribosomal protein S6 [Arthrobacter arilaitensis Re117]
gi|307746617|emb|CBT77589.1| 30S ribosomal protein S6 [Arthrobacter arilaitensis Re117]
Length = 98
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 56/87 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++ + ++ T+ +Y +++ NGG + V+ G R ++Y I+K +A Y
Sbjct: 1 MRAYELMVLIDPEVDDRTVEPTLEKYLEVVRSNGGTIDKVDIWGRRKMSYEIQKKAEATY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
V +N + PAA E++R+++I+E +LR
Sbjct: 61 VVVNYTAEPAASAELERQLKINELILR 87
>gi|298243925|ref|ZP_06967732.1| ribosomal protein S6 [Ktedonobacter racemifer DSM 44963]
gi|297556979|gb|EFH90843.1| ribosomal protein S6 [Ktedonobacter racemifer DSM 44963]
Length = 180
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 53/87 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE F+L ++S ++ + + + + ++ GG++ VN G R +AY I ++R YVF+
Sbjct: 5 YELAFILNPEVSEEETRTILDRVEQIVANYGGQIVKVNNWGRRRLAYPIERHRDGIYVFI 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
++ P + E++R +++ E+VLR +T
Sbjct: 65 DMILTPETVAEIERTLKVSESVLRYMT 91
>gi|256821794|ref|YP_003145757.1| 30S ribosomal protein S6 [Kangiella koreensis DSM 16069]
gi|256795333|gb|ACV25989.1| ribosomal protein S6 [Kangiella koreensis DSM 16069]
Length = 134
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y +I + G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSDQVPGMIERYTKMITDGAGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
V MN+ + I E++ R ++ +LR++ + E SP ++ +RD++ R
Sbjct: 60 VLMNVETTGEIIEELEDAFRFNDAILRNMVMRRKEAVTEASPMAAAKKDERDEKPRR 116
>gi|114564512|ref|YP_752026.1| 30S ribosomal protein S6 [Shewanella frigidimarina NCIMB 400]
gi|122298730|sp|Q07XS7|RS6_SHEFN RecName: Full=30S ribosomal protein S6
gi|114335805|gb|ABI73187.1| SSU ribosomal protein S6P [Shewanella frigidimarina NCIMB 400]
Length = 130
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I G V + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITAANGTVHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ + +I E++ R ++ VLR++ + + E SP + R +RD R R P
Sbjct: 60 VLLNVEASAESIEELETAFRFNDAVLRNMVMRTKAAVTEASP-MAKARDERDSR--RSPS 116
Query: 119 -DRNVD 123
DRNV+
Sbjct: 117 DDRNVE 122
>gi|170728537|ref|YP_001762563.1| 30S ribosomal protein S6 [Shewanella woodyi ATCC 51908]
gi|226695132|sp|B1KHZ0|RS6_SHEWM RecName: Full=30S ribosomal protein S6
gi|169813884|gb|ACA88468.1| ribosomal protein S6 [Shewanella woodyi ATCC 51908]
Length = 139
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR 112
V MN+ + ++ E++ R ++ VLR++ + + E SP + + +RD R
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRNMVMRTKAAITEASP-MAKAKDERDSR 112
>gi|330807240|ref|YP_004351702.1| 30S ribosomal protein S6 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375348|gb|AEA66698.1| 30S ribosomal protein S6 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 142
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|70734081|ref|YP_257721.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf-5]
gi|91207932|sp|Q4KJ62|RS6_PSEF5 RecName: Full=30S ribosomal protein S6
gi|68348380|gb|AAY95986.1| ribosomal protein S6 [Pseudomonas fluorescens Pf-5]
Length = 141
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|288801222|ref|ZP_06406677.1| ribosomal protein S6 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331833|gb|EFC70316.1| ribosomal protein S6 [Prevotella sp. oral taxon 299 str. F0039]
Length = 114
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKEAVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ + P ++ ++ R DE V+R +T+ +D + + I+R ++
Sbjct: 61 CLLEFKAEPTIVNTLEIGYRRDERVIRFITVKLDKY--AAEYAIKRKNK 107
>gi|85713278|ref|ZP_01044301.1| 30S ribosomal protein S6 [Idiomarina baltica OS145]
gi|85692896|gb|EAQ30871.1| 30S ribosomal protein S6 [Idiomarina baltica OS145]
Length = 115
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSETIKQGGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +NI + + E++ R ++ VLR+L +
Sbjct: 60 VLLNIEANAEVVDELETAFRFNDAVLRNLVM 90
>gi|121997454|ref|YP_001002241.1| 30S ribosomal protein S6 [Halorhodospira halophila SL1]
gi|166226971|sp|A1WUS7|RS6_HALHL RecName: Full=30S ribosomal protein S6
gi|121588859|gb|ABM61439.1| SSU ribosomal protein S6P [Halorhodospira halophila SL1]
Length = 119
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ + +Y+S+++ +GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSDQVPAMVERYRSIVESSGGTVHRLEDWGRRQLAYPINKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT-LTIQRHDRDDRND 114
V MN+ + E+ R ++ V+R++ L D P+ L R+DR +
Sbjct: 60 VLMNVECGKDELDELTSAFRFNDAVIRNMVLSRDEAVTEPSPLAKGNEKREDRKE 114
>gi|284929659|ref|YP_003422181.1| 30S ribosomal protein S6P [cyanobacterium UCYN-A]
gi|284810103|gb|ADB95800.1| SSU ribosomal protein S6P [cyanobacterium UCYN-A]
Length = 141
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQS-LIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++LR D+S +Q + +YQ LI+ N +++ VN G R +AY I+K YV
Sbjct: 5 YEMIYILRPDLSEEQANQAVTKYQDFLIKNNAIDIK-VNVWGKRRLAYPIQKKLDGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV-----------DSHEQSPTLTIQRHDRDD 111
N + I ++R MR++E+VLR LT+ V D++E +P + + + D+
Sbjct: 64 FNYQADGTQIEPLERIMRLEEDVLRYLTIKVEEDLIEQTSELDNNEINPEIVKKSEELDN 123
Query: 112 RNDRFPRDRNVD 123
N + + V+
Sbjct: 124 NNPKTSEAKTVE 135
>gi|307132414|ref|YP_003884430.1| 30S ribosomal subunit protein S6 [Dickeya dadantii 3937]
gi|306529943|gb|ADM99873.1| 30S ribosomal subunit protein S6 [Dickeya dadantii 3937]
Length = 130
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ +P I E++ R ++ V+RS+ + V E SP + + R+ R++
Sbjct: 60 VLMNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDE 115
>gi|195536239|ref|ZP_03079246.1| ribosomal protein S6 [Francisella tularensis subsp. novicida FTE]
gi|208779342|ref|ZP_03246688.1| ribosomal protein S6 [Francisella novicida FTG]
gi|194372716|gb|EDX27427.1| ribosomal protein S6 [Francisella tularensis subsp. novicida FTE]
gi|208745142|gb|EDZ91440.1| ribosomal protein S6 [Francisella novicida FTG]
Length = 103
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+YV NI P ++ ++
Sbjct: 7 SDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHYVLFNIECPTESLEKL 66
Query: 76 KRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+ +R ++ +LR L + P++ ++ ++++
Sbjct: 67 QESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 101
>gi|312958663|ref|ZP_07773183.1| 30S ribosomal protein S6 [Pseudomonas fluorescens WH6]
gi|311287206|gb|EFQ65767.1| 30S ribosomal protein S6 [Pseudomonas fluorescens WH6]
Length = 140
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|229588086|ref|YP_002870205.1| 30S ribosomal protein S6 [Pseudomonas fluorescens SBW25]
gi|259495341|sp|C3KE67|RS6_PSEFS RecName: Full=30S ribosomal protein S6
gi|229359952|emb|CAY46806.1| 30S ribosomal protein S6 [Pseudomonas fluorescens SBW25]
Length = 140
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ A+ E++ R ++ V+R+L +
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVI 90
>gi|302535599|ref|ZP_07287941.1| ribosomal protein S6 [Streptomyces sp. C]
gi|302444494|gb|EFL16310.1| ribosomal protein S6 [Streptomyces sp. C]
Length = 96
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVLDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|239930202|ref|ZP_04687155.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
gi|291438546|ref|ZP_06577936.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
gi|291341441|gb|EFE68397.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
Length = 96
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|85859720|ref|YP_461922.1| 30S ribosomal protein S6P [Syntrophus aciditrophicus SB]
gi|85722811|gb|ABC77754.1| SSU ribosomal protein S6P [Syntrophus aciditrophicus SB]
Length = 173
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V + + ++ + I +Y S+I + G V ++ G+R +AY IRK + YV
Sbjct: 24 YETVVIAQANLPEDDMTGLIERYNSIIADRKGTVVKIDRWGVRKLAYDIRKQTRGAYVIY 83
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ A + E++R ++ID+NVL+ +T+L D
Sbjct: 84 DFAGTSDVVAELERNLKIDDNVLKYMTVLTD 114
>gi|260219662|emb|CBA26507.1| 30S ribosomal protein S6 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 121
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ +I GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQMVYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R+D
Sbjct: 60 LCVNIEADQAVMSELEHAFKFNDAVLRHLTVSKKKAETGPSSMMKTVERED 110
>gi|317049742|ref|YP_004117390.1| 30S ribosomal protein S6 [Pantoea sp. At-9b]
gi|316951359|gb|ADU70834.1| ribosomal protein S6 [Pantoea sp. At-9b]
Length = 131
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V +N+ +P I E++ R ++ V+RS+ + V E SP + + R+ R D
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRED 115
>gi|254384803|ref|ZP_05000140.1| 30S ribosomal protein S6 [Streptomyces sp. Mg1]
gi|297193322|ref|ZP_06910720.1| 30S ribosomal protein S6 [Streptomyces pristinaespiralis ATCC
25486]
gi|194343685|gb|EDX24651.1| 30S ribosomal protein S6 [Streptomyces sp. Mg1]
gi|197718360|gb|EDY62268.1| 30S ribosomal protein S6 [Streptomyces pristinaespiralis ATCC
25486]
Length = 96
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|333029250|ref|ZP_08457311.1| 30S ribosomal protein S6 [Bacteroides coprosuis DSM 18011]
gi|332739847|gb|EGJ70329.1| 30S ribosomal protein S6 [Bacteroides coprosuis DSM 18011]
Length = 115
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++Q G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKDVLQAEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + PA I +++ R DE V+R LT +D +
Sbjct: 59 FYQLLEFNADPAVIEKLEVSFRRDERVIRFLTFKMDKY 96
>gi|311032236|ref|ZP_07710326.1| 30S ribosomal protein S6 [Bacillus sp. m3-13]
Length = 96
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I K ++ +++ +NG ++ E G R +AY I R YY
Sbjct: 1 MNKYEIMYIIRPNIEEDAKKALTERFNTILTDNGADLTESKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+A+ PAA+ E R +I E+++R + +
Sbjct: 61 MLVNVAAEPAAVQEFDRLAKISEDIIRHIVV 91
>gi|56461040|ref|YP_156321.1| 30S ribosomal protein S6 [Idiomarina loihiensis L2TR]
gi|61215392|sp|Q5QY01|RS6_IDILO RecName: Full=30S ribosomal protein S6
gi|56180050|gb|AAV82772.1| Ribosomal protein S6 [Idiomarina loihiensis L2TR]
Length = 116
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSETIKQGGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT-LTIQRHDR 109
V +NI + + E++ R ++ VLR++ + P+ LT + DR
Sbjct: 60 VLLNIEASAEVVEELETAFRYNDAVLRNMIMRKKESITEPSPLTKPKEDR 109
>gi|168013078|ref|XP_001759228.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689541|gb|EDQ75912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +FL+ + + +++ D I + ++ + E G++ VN+ G+R +AY+I+KN +A YV M
Sbjct: 116 YEIMFLVPES-NLEKVPDVIKKVEAFVAEQKGKIWRVNDWGVRRLAYKIKKNERANYVLM 174
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
NI AI+E+ DE V+R + +
Sbjct: 175 NIEMKAEAINELNSLFEKDERVIRHMCI 202
>gi|149372599|ref|ZP_01891711.1| 30S ribosomal protein S6 [unidentified eubacterium SCB49]
gi|149354642|gb|EDM43206.1| 30S ribosomal protein S6 [unidentified eubacterium SCB49]
Length = 112
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ ++ G ++ + G++ ++Y I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSEDQIKETVKKYEDILVSGGAKMISKEDWGLKKLSYAIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
M P I++++ R DE V+R LT+ +D H + +R +RD
Sbjct: 61 HLMEYQVPGEVINDLELAFRRDERVMRYLTVKLDKH--AIAWAEKRRNRD 108
>gi|319943301|ref|ZP_08017584.1| 30S ribosomal protein S6 [Lautropia mirabilis ATCC 51599]
gi|319743843|gb|EFV96247.1| 30S ribosomal protein S6 [Lautropia mirabilis ATCC 51599]
Length = 129
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ +++ G++ V + G +AY I+K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIDRYKQMVEGANGKMHRVEDWGRLQLAYPIQKIGKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MN+ + E++ R ++ VLR L + +D E P++ +R +++
Sbjct: 60 VLMNVECDQHTLGEIENAFRFNDAVLRHLVVRMDKAETGPSVMSKRLQKEE 110
>gi|238755920|ref|ZP_04617248.1| 30S ribosomal protein S6 [Yersinia ruckeri ATCC 29473]
gi|238705879|gb|EEP98268.1| 30S ribosomal protein S6 [Yersinia ruckeri ATCC 29473]
Length = 122
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y + I G++ + + G R +AY I K KA+YV +N+ +P AI E+
Sbjct: 7 SEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQEAIDEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ R ++ V+RS+ + V + E SP + + +R +R+D F + N D + SEE
Sbjct: 67 ETNFRFNDAVIRSMVMRVKNAVTEASP-MVKAKDERRERHD-FASETNDDSEAGDSEE 122
>gi|297538626|ref|YP_003674395.1| 30S ribosomal protein S6 [Methylotenera sp. 301]
gi|297257973|gb|ADI29818.1| ribosomal protein S6 [Methylotenera sp. 301]
Length = 132
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++LI +GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYELVFIVHPD-QSEQVPAMIERYRTLITASGGAVHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR L + + +P+
Sbjct: 60 VLMNIECNLEVLAELEHGFKFNDAVLRHLLMSKKTAVTAPS 100
>gi|284036034|ref|YP_003385964.1| ribosomal protein S6 [Spirosoma linguale DSM 74]
gi|283815327|gb|ADB37165.1| ribosomal protein S6 [Spirosoma linguale DSM 74]
Length = 124
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S Q+KD + +++ ++ +NG E+ + +G+R +AY I+ YY
Sbjct: 6 YETVFILTPVLSEAQMKDAVDKFRKVLTDNGAELVHEDHMGLRKLAYPIQHKNTGYYQLF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I ++ + DE ++R LT+ +D H
Sbjct: 66 EFKAPGTIIEKLNTEYLRDERIIRHLTVSLDKH 98
>gi|254391456|ref|ZP_05006658.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|326442135|ref|ZP_08216869.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|197705145|gb|EDY50957.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
Length = 96
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|163755339|ref|ZP_02162459.1| 30S ribosomal protein S6 [Kordia algicida OT-1]
gi|161324759|gb|EDP96088.1| 30S ribosomal protein S6 [Kordia algicida OT-1]
Length = 112
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +++ I GG++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQIKETVAKFEDFIVSRGGKMISKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I++ + + R DE ++R LT+ +D H
Sbjct: 61 HLFEFQAPGEIINQYELEFRRDERIMRYLTVRLDKH 96
>gi|283834820|ref|ZP_06354561.1| ribosomal protein S6 [Citrobacter youngae ATCC 29220]
gi|291069068|gb|EFE07177.1| ribosomal protein S6 [Citrobacter youngae ATCC 29220]
Length = 131
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDADAGDSEE 131
>gi|298492977|ref|YP_003723154.1| 30S ribosomal protein S6 ['Nostoc azollae' 0708]
gi|298234895|gb|ADI66031.1| ribosomal protein S6 ['Nostoc azollae' 0708]
Length = 108
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D+ +Q++ + +YQ+L+ E G + + G R +AY I ++R Y+
Sbjct: 4 VYETMYILRPDLGDEQVEQAVAKYQNLLTEQGAQNIEIQNRGKRRLAYEINRHRDGIYIQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
N + AI ++R MR+ E V+R +T
Sbjct: 64 FNYTALATAITPVERAMRLSEEVIRYMT 91
>gi|126654886|ref|ZP_01726420.1| 30S ribosomal protein S6 [Cyanothece sp. CCY0110]
gi|126623621|gb|EAZ94325.1| 30S ribosomal protein S6 [Cyanothece sp. CCY0110]
Length = 126
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+LR D+S +Q+ + +YQ + EN G R +AY I+K YV
Sbjct: 5 YEMIFILRPDLSEEQVNQAVTKYQEFLTENNATDLQTKIWGKRRLAYPIQKKVDGIYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + + I ++R MR+ E+VLR LT+ +D
Sbjct: 65 NYQADGSQIAPLERMMRLGEDVLRYLTIKLD 95
>gi|157147829|ref|YP_001455147.1| 30S ribosomal protein S6 [Citrobacter koseri ATCC BAA-895]
gi|166226820|sp|A8AMJ8|RS6_CITK8 RecName: Full=30S ribosomal protein S6
gi|157085034|gb|ABV14712.1| hypothetical protein CKO_03633 [Citrobacter koseri ATCC BAA-895]
Length = 131
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVK-AKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDADAGDSEE 131
>gi|315638123|ref|ZP_07893306.1| 30S ribosomal protein S6 [Campylobacter upsaliensis JV21]
gi|315481803|gb|EFU72424.1| 30S ribosomal protein S6 [Campylobacter upsaliensis JV21]
Length = 125
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E++ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVSAKLEFVKEILSKNGAEIQTVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P + I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTSLIAELERVLRITEEVIRFLIV 91
>gi|251788411|ref|YP_003003132.1| 30S ribosomal protein S6 [Dickeya zeae Ech1591]
gi|271501891|ref|YP_003334917.1| 30S ribosomal protein S6 [Dickeya dadantii Ech586]
gi|247537032|gb|ACT05653.1| ribosomal protein S6 [Dickeya zeae Ech1591]
gi|270345446|gb|ACZ78211.1| ribosomal protein S6 [Dickeya dadantii Ech586]
Length = 130
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V +N+ +P I E++ R ++ V+RS+ + V E SP + + R+ R++
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDE 115
>gi|206901639|ref|YP_002251077.1| ribosomal protein S6 [Dictyoglomus thermophilum H-6-12]
gi|226703455|sp|B5YEW9|RS6_DICT6 RecName: Full=30S ribosomal protein S6
gi|206740742|gb|ACI19800.1| ribosomal protein S6 [Dictyoglomus thermophilum H-6-12]
Length = 97
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++S ++ K IQ GGEV+ V+ G RT+AY ++K + YY
Sbjct: 1 MRKYEIMCLMSPELSEEEFKTLYESIHQDIQSLGGEVQNVDVWGKRTLAYPVKKFTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V MN P + E +R++++ E +LR + L++ E
Sbjct: 61 VVMNFLFPQNQLPEFERRLKLREKLLRYMITLLEKEE 97
>gi|302393058|ref|YP_003828878.1| ribosomal protein S6 [Acetohalobium arabaticum DSM 5501]
gi|302205135|gb|ADL13813.1| ribosomal protein S6 [Acetohalobium arabaticum DSM 5501]
Length = 95
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D+ ++ + + I EN GE+ +++ G + +AY + ++ YY
Sbjct: 1 MRKYETMFIVNPDLEDDATEEIVEKITDTIDENKGEISNIDKWGTKNLAYELDDHKAGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N I E++R R+D+N+LR + L
Sbjct: 61 TVVNFEGESETIDELERAYRLDDNILRFIIL 91
>gi|187478665|ref|YP_786689.1| 30S ribosomal protein S6 [Bordetella avium 197N]
gi|123514609|sp|Q2KZ18|RS6_BORA1 RecName: Full=30S ribosomal protein S6
gi|115423251|emb|CAJ49784.1| 30S ribosomal protein S6 [Bordetella avium 197N]
Length = 124
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQSL+ G V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQSLVTGQNGAVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI A + E++ R ++ VLR L +
Sbjct: 60 VCMNIECNQATLDELEHSFRYNDAVLRHLVI 90
>gi|138897056|ref|YP_001127509.1| 30S ribosomal protein S6 [Geobacillus thermodenitrificans NG80-2]
gi|134268569|gb|ABO68764.1| Ribosomal protein S6 (BS9) [Geobacillus thermodenitrificans
NG80-2]
Length = 98
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R ++ + + + ++ ++++E G E+ V + G R +AY I K R YY+ +
Sbjct: 7 YEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEKYRDGYYMIL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ + P A+ E R RI E+++R + +
Sbjct: 67 NVMAEPQAVQEFDRLARISEDIIRHIVV 94
>gi|119718881|ref|YP_925846.1| SSU ribosomal protein S6P [Nocardioides sp. JS614]
gi|166227356|sp|A1SQS4|RS6_NOCSJ RecName: Full=30S ribosomal protein S6
gi|119539542|gb|ABL84159.1| SSU ribosomal protein S6P [Nocardioides sp. JS614]
Length = 96
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +Y ++I+++GG V V+ G R +AY ++KN + Y
Sbjct: 1 MRAYEVMVILDPSLEERTVEPSLDKYLNVIRKDGGTVESVDVWGRRRLAYEVKKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + PA + E R++ ++E+++R+ + D+H
Sbjct: 61 AVIKLNAEPATVKEFDRQLTLNESIIRTKVMRPDAH 96
>gi|294634470|ref|ZP_06713005.1| ribosomal protein S6 [Edwardsiella tarda ATCC 23685]
gi|291091984|gb|EFE24545.1| ribosomal protein S6 [Edwardsiella tarda ATCC 23685]
Length = 131
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ +P I E++ R ++ V+RS+ + E SP + + R+ R D
Sbjct: 60 VLMNVEAPQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRED 115
>gi|292670200|ref|ZP_06603626.1| 30S ribosomal protein S6 [Selenomonas noxia ATCC 43541]
gi|292648152|gb|EFF66124.1| 30S ribosomal protein S6 [Selenomonas noxia ATCC 43541]
Length = 124
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++LYE +F+++ + + I ++ LIQ NGG + + G + +AY I+ N + YY
Sbjct: 28 VRLYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEIKDNTEGYY 86
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
V + + + PA + E R M+I + +L+ + + D E+
Sbjct: 87 VLLYVNAEPACVAECDRVMKITDELLKHMIVRADGVEE 124
>gi|171059511|ref|YP_001791860.1| 30S ribosomal protein S6 [Leptothrix cholodnii SP-6]
gi|226703484|sp|B1XXH5|RS6_LEPCP RecName: Full=30S ribosomal protein S6
gi|170776956|gb|ACB35095.1| ribosomal protein S6 [Leptothrix cholodnii SP-6]
Length = 121
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y++L+ G+V V + G +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSEQVPAMLERYKTLVTAANGKVHRVEDWGRFQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + E++ R ++ VLR LT+ D E P+ ++R ++++
Sbjct: 60 LCLNIECSKETLAEIETGFRFNDAVLRHLTVKRDKAETGPSAVMKRVEKEE 110
>gi|154498401|ref|ZP_02036779.1| hypothetical protein BACCAP_02390 [Bacteroides capillosus ATCC
29799]
gi|150272469|gb|EDM99654.1| hypothetical protein BACCAP_02390 [Bacteroides capillosus ATCC
29799]
Length = 98
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V++L D+ + + ++++L++ NG + V+E G R +AY I YYV M
Sbjct: 8 YEAVYILDADLGEEATAALVAKFKTLVESNG-TLTEVDEWGKRRLAYPINDKNDGYYVLM 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S P+ E+ R RI + V+RSL + D
Sbjct: 67 TFTSAPSFPLELDRIFRITDGVVRSLIVCKD 97
>gi|251800231|ref|YP_003014962.1| ribosomal protein S6 [Paenibacillus sp. JDR-2]
gi|247547857|gb|ACT04876.1| ribosomal protein S6 [Paenibacillus sp. JDR-2]
Length = 94
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + ++ + ++ +I NGGEV + +G R +AY I K R YY
Sbjct: 1 MRKYEVMYIIRPDVEQENVQAIVDKFSGIIN-NGGEVTKQDVIGKRRLAYEINKIRDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ + ++E+ R M+I + V+RSL +
Sbjct: 60 VLVHFNATTEVVNELDRIMKITDEVIRSLIV 90
>gi|118444568|ref|YP_876989.1| 30S ribosomal protein S6 [Clostridium novyi NT]
gi|166226824|sp|A0PX87|RS6_CLONN RecName: Full=30S ribosomal protein S6
gi|118135024|gb|ABK62068.1| ribosomal protein S6 [Clostridium novyi NT]
Length = 95
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I++ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILNPSLDEEATKAAIEKFKGVIEKEGGVVENVDEWGRRKLAYPINKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E++R RI + V+R + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVV 91
>gi|294813713|ref|ZP_06772356.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|294326312|gb|EFG07955.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
Length = 107
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 12 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 72 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 107
>gi|83816197|ref|YP_445489.1| 30S ribosomal protein S6 [Salinibacter ruber DSM 13855]
gi|83757591|gb|ABC45704.1| 30S ribosomal protein S6 [Salinibacter ruber DSM 13855]
Length = 202
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++ + Q+ D + + LI+ N G+V V+E G + +AY I + R YYV M
Sbjct: 82 YELTYVISGVVKQNQVDDIVRKVNHLIESNDGDVLEVDEWGNQRLAYEIDRKRSGYYVNM 141
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+P + ++R++ I+++VLR LTL +D+
Sbjct: 142 YFQAPGELVPRLERELDINDDVLRYLTLRMDA 173
>gi|282891670|ref|ZP_06300157.1| hypothetical protein pah_c188o045 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281498460|gb|EFB40792.1| hypothetical protein pah_c188o045 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 114
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 56/92 (60%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++++ +S + K + + Q+ I E+GGE+ V++ G R +AY+I +R+ YY
Sbjct: 8 LYEGMYVISATLSDEARKKALEKIQNGITEHGGEILKVHDQGRRRLAYQIDGHREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + PAAI E+ ++E+++R +TL D
Sbjct: 68 LYFSVDPAAISELWHDYHLNEDLIRFITLRTD 99
>gi|74318123|ref|YP_315863.1| 30S ribosomal protein S6 [Thiobacillus denitrificans ATCC 25259]
gi|91207799|sp|Q3SH31|RS6_THIDA RecName: Full=30S ribosomal protein S6
gi|74057618|gb|AAZ98058.1| ribosomal protein S6 [Thiobacillus denitrificans ATCC 25259]
Length = 127
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRANIAARGGNVHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MNI + E++ + ++ VLR LT+ D+
Sbjct: 60 VLMNIECDQETLEELEHGFKFNDAVLRHLTIKRDA 94
>gi|304436797|ref|ZP_07396765.1| 30S ribosomal protein S6 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370277|gb|EFM23934.1| 30S ribosomal protein S6 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 97
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 1 MKLYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M+LYE +F+++ +D+++ I+ ++ LIQ NGG++ + G + +AY I+ +
Sbjct: 1 MRLYEVIFIVKPMEEDVTNAVIE----KFTKLIQANGGKIEKEDRWGKKRLAYEIKDMTE 56
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
YYV + + + PA + E R M+I +++L+ + + D E+
Sbjct: 57 GYYVLLYVNAEPACVAECDRVMKITDDLLKHMIVRADGIEE 97
>gi|302559693|ref|ZP_07312035.1| 30S ribosomal protein S6 [Streptomyces griseoflavus Tu4000]
gi|302477311|gb|EFL40404.1| 30S ribosomal protein S6 [Streptomyces griseoflavus Tu4000]
Length = 96
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDTEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|91791879|ref|YP_561530.1| 30S ribosomal protein S6 [Shewanella denitrificans OS217]
gi|123061287|sp|Q12RW9|RS6_SHEDO RecName: Full=30S ribosomal protein S6
gi|91713881|gb|ABE53807.1| SSU ribosomal protein S6P [Shewanella denitrificans OS217]
Length = 130
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I G + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSGVITAANGTIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL--LVDSHEQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + +I E++ R ++ VLR++ + V E SP + R +RD R R P
Sbjct: 60 VLMNVEATAESIEELETAFRFNDAVLRNMVMRTKVAVTEASP-MAKARDERDSR--RSPS 116
Query: 119 D 119
D
Sbjct: 117 D 117
>gi|255020466|ref|ZP_05292531.1| SSU ribosomal protein S6p [Acidithiobacillus caldus ATCC 51756]
gi|254970076|gb|EET27573.1| SSU ribosomal protein S6p [Acidithiobacillus caldus ATCC 51756]
Length = 125
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+ + I +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSELVPQMIERYRGMIEGDGGTIHRLEDWGRRQLAYPIKKAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ MN+ AA+ E++ R + VLR L L D P+ + D +DR +R
Sbjct: 60 ILMNVECSAAALAELEDAFRFSDAVLRHLILARDEAITQPSFLAR--DENDRRER 112
>gi|294507375|ref|YP_003571433.1| 30S ribosomal protein S6 [Salinibacter ruber M8]
gi|294343703|emb|CBH24481.1| 30S ribosomal protein S6 [Salinibacter ruber M8]
Length = 140
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++ + Q+ D + + LI+ N G+V V+E G + +AY I + R YYV M
Sbjct: 20 YELTYVISGVVKQNQVDDIVRKVNHLIESNDGDVLEVDEWGNQRLAYEIDRKRSGYYVNM 79
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+P + ++R++ I+++VLR LTL +D+
Sbjct: 80 YFQAPGELVPRLERELDINDDVLRYLTLRMDA 111
>gi|242238246|ref|YP_002986427.1| 30S ribosomal protein S6 [Dickeya dadantii Ech703]
gi|242130303|gb|ACS84605.1| ribosomal protein S6 [Dickeya dadantii Ech703]
Length = 130
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V +N+ +P I E++ R ++ V+RS+ + V E SP + + R+ R++
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDE 115
>gi|329297943|ref|ZP_08255279.1| 30S ribosomal protein S6 [Plautia stali symbiont]
Length = 131
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MCHYEIVFMVHPD-QSEQVPGMIERYTGAITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P I E++ R ++ V+RS+ + V E SP + + R+ R D F
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRED-FAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ESAEDSDAGDSEE 131
>gi|319760230|ref|YP_004124168.1| 30S ribosomal protein S6 [Candidatus Blochmannia vafer str. BVAF]
gi|318038944|gb|ADV33494.1| 30S ribosomal protein S6 [Candidatus Blochmannia vafer str. BVAF]
Length = 122
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ + + I + I Y +I +GG+V V G R +AY I+K KAYY
Sbjct: 1 MRHYEIVLIIHPNFGGK-IVNIINNYTEIIISSGGKVHRVENWGDRQLAYSIKKLSKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MNI I+E+ R +E +LR++ + + P+ + + + ++N
Sbjct: 60 VLMNIEVSLNVINELSNDFRFNEVILRNIIMKTKDAKIDPSPMMNKKEDSNKN 112
>gi|291280359|ref|YP_003497194.1| 30S ribosomal protein S6 [Deferribacter desulfuricans SSM1]
gi|290755061|dbj|BAI81438.1| 30S ribosomal protein S6 [Deferribacter desulfuricans SSM1]
Length = 125
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+S + Q++ LI ++ G++ G +T+AY+I+K + YY
Sbjct: 1 MRVYETLFIVKPDLSQEDANKVFEQFKELIVKHNGKILHEEVWGKKTLAYKIQKFSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + E++R+ R++E+V+R + + +D
Sbjct: 61 FLINFEAEADFPKELERRFRLNESVIRFIVIKIDG 95
>gi|221633231|ref|YP_002522456.1| 30S ribosomal protein S6 [Thermomicrobium roseum DSM 5159]
gi|221156055|gb|ACM05182.1| ribosomal protein S6 [Thermomicrobium roseum DSM 5159]
Length = 105
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLV---NELGMRTIAYRIRKNRKAYY 60
YE + LLR D++ +++ + + ++ + E GG + G R +AY I+K ++A+Y
Sbjct: 11 YELMVLLRPDLADDRLEAALERIRNTVVEQGGTITFEKRDTPWGRRRLAYPIQKFQEAFY 70
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + PP + E++R++R++E VLR L + +D
Sbjct: 71 VLFQLVCPPRTVREIERELRLNEQVLRHLMVRLDE 105
>gi|237654325|ref|YP_002890639.1| 30S ribosomal protein S6 [Thauera sp. MZ1T]
gi|237625572|gb|ACR02262.1| ribosomal protein S6 [Thauera sp. MZ1T]
Length = 128
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+S++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKSIVTTRNGQIHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR LT+ + +P+
Sbjct: 60 VLMNIECDGETLAELEHSFKFNDAVLRHLTIKMKKAVTTPS 100
>gi|15618860|ref|NP_225146.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae CWL029]
gi|15836484|ref|NP_301008.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae J138]
gi|16752079|ref|NP_445445.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae AR39]
gi|33242319|ref|NP_877260.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae TW-183]
gi|7388222|sp|Q9Z6V5|RS6_CHLPN RecName: Full=30S ribosomal protein S6
gi|4377276|gb|AAD19089.1| S6 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189820|gb|AAF38693.1| ribosomal protein S6 [Chlamydophila pneumoniae AR39]
gi|8979325|dbj|BAA99159.1| S6 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236830|gb|AAP98917.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae TW-183]
gi|269302743|gb|ACZ32843.1| ribosomal protein S6 [Chlamydophila pneumoniae LPCoLN]
Length = 112
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEEARRKALDKVISGITNYGGEIHKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + P AI E+ ++ ++E++LR +TL DS
Sbjct: 67 FIYFSVSPGAITELWKEYHLNEDLLRFMTLRADS 100
>gi|117617863|ref|YP_855252.1| 30S ribosomal protein S6 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330831138|ref|YP_004394090.1| 30S ribosomal protein S6 [Aeromonas veronii B565]
gi|166226795|sp|A0KG67|RS6_AERHH RecName: Full=30S ribosomal protein S6
gi|117559270|gb|ABK36218.1| ribosomal protein S6 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|328806274|gb|AEB51473.1| 30S ribosomal protein S6 [Aeromonas veronii B565]
Length = 128
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I +GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITTSGGTIHRLEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ V+R++ +
Sbjct: 60 VLMNVEAEQAVIDELETNFRFNDAVIRNMIM 90
>gi|148243619|ref|YP_001228776.1| 30S ribosomal protein S6 [Synechococcus sp. RCC307]
gi|166227398|sp|A5GX14|RS6_SYNR3 RecName: Full=30S ribosomal protein S6
gi|147851929|emb|CAK29423.1| 30S ribosomal protein S6 [Synechococcus sp. RCC307]
Length = 135
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++++ +Y+ L+ E GGEV G R +AY I K+R+ Y+ +
Sbjct: 7 YETMYILRPDIAEEEVESHANKYRDLVVEAGGEVIDSQMRGKRRLAYNIGKHREGIYIQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
N + + +++ MR+ E+V+R LT+ + S
Sbjct: 67 NYSGDGKQVGPLEKAMRLSEDVIRYLTVKYEGQHSS 102
>gi|332529063|ref|ZP_08405028.1| 30S ribosomal protein S6 [Hylemonella gracilis ATCC 19624]
gi|332041507|gb|EGI77868.1| 30S ribosomal protein S6 [Hylemonella gracilis ATCC 19624]
Length = 122
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ ++ GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMVTTGGGKVHRVEDWGRRQMTYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + + VLR LT++ E P+ ++ +R++
Sbjct: 60 LCLNIEADRAVMEELEHAFKFSDAVLRHLTVVKKKAETGPSAMMKAVEREE 110
>gi|113868255|ref|YP_726744.1| 30S ribosomal protein S6 [Ralstonia eutropha H16]
gi|194289923|ref|YP_002005830.1| 30S ribosomal protein s6 [Cupriavidus taiwanensis LMG 19424]
gi|123032891|sp|Q0K9E5|RS6_RALEH RecName: Full=30S ribosomal protein S6
gi|226703447|sp|B3R2P7|RS6_CUPTR RecName: Full=30S ribosomal protein S6
gi|113527031|emb|CAJ93376.1| SSU ribosomal protein S6 [Ralstonia eutropha H16]
gi|193223758|emb|CAQ69765.1| 30S ribosomal subunit protein S6 [Cupriavidus taiwanensis LMG
19424]
Length = 124
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ L+ G V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKQLVTSQNGNVHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|294501976|ref|YP_003565676.1| 30S ribosomal protein S6 [Bacillus megaterium QM B1551]
gi|295707327|ref|YP_003600402.1| 30S ribosomal protein S6 [Bacillus megaterium DSM 319]
gi|294351913|gb|ADE72242.1| 30S ribosomal protein S6 [Bacillus megaterium QM B1551]
gi|294804986|gb|ADF42052.1| 30S ribosomal protein S6 [Bacillus megaterium DSM 319]
Length = 95
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R I + K + ++ ++ +NG E+ V E G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPSIDDEAKKALVERFNGVLTDNGAEIANVKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +++A+ A+ E R +I+E+++R + +
Sbjct: 61 MILDVAATSEAVSEFDRLAKINEDIIRHIVV 91
>gi|188992092|ref|YP_001904102.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. B100]
gi|226705647|sp|B0RUY9|RS6_XANCB RecName: Full=30S ribosomal protein S6
gi|167733852|emb|CAP52058.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris]
Length = 144
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVIKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|239918785|ref|YP_002958343.1| SSU ribosomal protein S6P [Micrococcus luteus NCTC 2665]
gi|281414989|ref|ZP_06246731.1| 30S ribosomal protein S6 [Micrococcus luteus NCTC 2665]
gi|289706695|ref|ZP_06503043.1| ribosomal protein S6 [Micrococcus luteus SK58]
gi|259495339|sp|C5C7V1|RS6_MICLC RecName: Full=30S ribosomal protein S6
gi|239839992|gb|ACS31789.1| SSU ribosomal protein S6P [Micrococcus luteus NCTC 2665]
gi|289556615|gb|EFD49958.1| ribosomal protein S6 [Micrococcus luteus SK58]
Length = 101
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++ + ++ T+ +Y ++ GG V ++ G R AY I+K +A Y
Sbjct: 1 MRAYELMVLIDPEVDERTVEPTLKKYLEVVTNAGGTVDNIDVWGRRKTAYEIQKKSEAIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +N S PAA E+ R + ++E +LR+
Sbjct: 61 VVVNFQSEPAATQELDRLLNLNETILRT 88
>gi|89897782|ref|YP_521269.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense Y51]
gi|219670931|ref|YP_002461366.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense DCB-2]
gi|122480435|sp|Q24MB7|RS6_DESHY RecName: Full=30S ribosomal protein S6
gi|254765432|sp|B8G0J4|RS6_DESHD RecName: Full=30S ribosomal protein S6
gi|89337230|dbj|BAE86825.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense Y51]
gi|219541191|gb|ACL22930.1| ribosomal protein S6 [Desulfitobacterium hafniense DCB-2]
Length = 95
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R D+ + + T+ + ++ NGG +++ G R +AY + R+ +Y
Sbjct: 1 MKAYEVLYVIRPDLDDEAVAATVDKLSEVVTNNGGADVAIDKWGKRRLAYEVNDYREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ MN E++R M+I + V+R LT
Sbjct: 61 ILMNFNGEARTAQEVERIMKISDAVVRFLT 90
>gi|172037638|ref|YP_001804139.1| 30S ribosomal protein S6 [Cyanothece sp. ATCC 51142]
gi|254765233|sp|B1WU11|RS6_CYAA5 RecName: Full=30S ribosomal protein S6
gi|171699092|gb|ACB52073.1| 30s ribosomal protein S6 [Cyanothece sp. ATCC 51142]
Length = 119
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+LR D+S +Q+ + +YQ + EN G R +AY I+K YV
Sbjct: 5 YEMIFILRPDLSEEQVNQAVAKYQEFLTENNATDLQTKIWGKRRLAYPIQKKVDGIYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + + + ++R MR+ E+V+R LT+ +D
Sbjct: 65 NYQADGSQVAPLERMMRLGEDVMRYLTIKLD 95
>gi|21242370|ref|NP_641952.1| 30S ribosomal protein S6 [Xanthomonas axonopodis pv. citri str.
306]
gi|78047217|ref|YP_363392.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294626363|ref|ZP_06704965.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665955|ref|ZP_06731219.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325928162|ref|ZP_08189371.1| SSU ribosomal protein S6P [Xanthomonas perforans 91-118]
gi|24212288|sp|Q8PM14|RS6_XANAC RecName: Full=30S ribosomal protein S6
gi|91207801|sp|Q3BV21|RS6_XANC5 RecName: Full=30S ribosomal protein S6
gi|21107807|gb|AAM36488.1| 30S ribosomal protein S6 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035647|emb|CAJ23338.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292599364|gb|EFF43499.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292604258|gb|EFF47645.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325541458|gb|EGD12991.1| SSU ribosomal protein S6P [Xanthomonas perforans 91-118]
Length = 143
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVVKRDGADTEQSLIMKS--KDEKGDK 113
>gi|237809239|ref|YP_002893679.1| 30S ribosomal protein S6 [Tolumonas auensis DSM 9187]
gi|259495346|sp|C4LAB8|RS6_TOLAT RecName: Full=30S ribosomal protein S6
gi|237501500|gb|ACQ94093.1| ribosomal protein S6 [Tolumonas auensis DSM 9187]
Length = 124
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+ GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAIKAAGGTIHRLEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ + + I E++ R ++ V+R++ + E SP L R +R R D
Sbjct: 60 VLMNVEAEQSVIDELENNFRFNDAVIRNMIMRTKHAVTEASPMLK-AREERPRRED 114
>gi|87301535|ref|ZP_01084375.1| 30S ribosomal protein S6 [Synechococcus sp. WH 5701]
gi|87283752|gb|EAQ75706.1| 30S ribosomal protein S6 [Synechococcus sp. WH 5701]
Length = 117
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI ++++ + +Y+ L+ E G EV G R +AY I K+R+ YV +
Sbjct: 7 YETMYILRPDIPEEEVETHVAKYRDLLTEAGAEVLDCQMRGKRRLAYTIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
N + ++R MR+ E+V+R LT+ D +P
Sbjct: 67 NHDGDGQQVALLERAMRLSEDVIRYLTVKQDGPLPTP 103
>gi|21231017|ref|NP_636934.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768978|ref|YP_243740.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. 8004]
gi|24212286|sp|Q8PAC2|RS6_XANCP RecName: Full=30S ribosomal protein S6
gi|81305058|sp|Q4UTA3|RS6_XANC8 RecName: Full=30S ribosomal protein S6
gi|21112641|gb|AAM40858.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574310|gb|AAY49720.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 144
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVIKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|56477751|ref|YP_159340.1| 30S ribosomal protein S6 [Aromatoleum aromaticum EbN1]
gi|81357242|sp|Q5P2M5|RS6_AZOSE RecName: Full=30S ribosomal protein S6
gi|56313794|emb|CAI08439.1| 30S Ribosomal protein S6 [Aromatoleum aromaticum EbN1]
Length = 128
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYKAIVTARNGQIHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI A+ E++ + ++ VLR L + + +P+
Sbjct: 60 VLMNIECDGEALGELEHAFKFNDAVLRHLVVKTKAAVTTPS 100
>gi|21222313|ref|NP_628092.1| 30S ribosomal protein S6 [Streptomyces coelicolor A3(2)]
gi|256786586|ref|ZP_05525017.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
gi|289770478|ref|ZP_06529856.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
gi|7388220|sp|Q9X8U2|RS6_STRCO RecName: Full=30S ribosomal protein S6
gi|4808402|emb|CAB42734.1| putative 30S ribosomal protein S6 [Streptomyces coelicolor A3(2)]
gi|289700677|gb|EFD68106.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
Length = 96
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEMH 96
>gi|94310917|ref|YP_584127.1| 30S ribosomal protein S6 [Cupriavidus metallidurans CH34]
gi|166227371|sp|Q1LLW8|RS6_RALME RecName: Full=30S ribosomal protein S6
gi|93354769|gb|ABF08858.1| 30S ribosomal subunit protein S6 [Cupriavidus metallidurans CH34]
Length = 124
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ L+ G++ V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKQLVTSQNGQIHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCLNIECGKDTLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|126175838|ref|YP_001051987.1| 30S ribosomal protein S6 [Shewanella baltica OS155]
gi|152999250|ref|YP_001364931.1| 30S ribosomal protein S6 [Shewanella baltica OS185]
gi|160873863|ref|YP_001553179.1| 30S ribosomal protein S6 [Shewanella baltica OS195]
gi|217971923|ref|YP_002356674.1| 30S ribosomal protein S6 [Shewanella baltica OS223]
gi|304411186|ref|ZP_07392801.1| ribosomal protein S6 [Shewanella baltica OS183]
gi|307306481|ref|ZP_07586224.1| ribosomal protein S6 [Shewanella baltica BA175]
gi|166227381|sp|A3D8Q5|RS6_SHEB5 RecName: Full=30S ribosomal protein S6
gi|166227382|sp|A6WJ79|RS6_SHEB8 RecName: Full=30S ribosomal protein S6
gi|189045494|sp|A9L120|RS6_SHEB9 RecName: Full=30S ribosomal protein S6
gi|254765452|sp|B8E9N6|RS6_SHEB2 RecName: Full=30S ribosomal protein S6
gi|125999043|gb|ABN63118.1| SSU ribosomal protein S6P [Shewanella baltica OS155]
gi|151363868|gb|ABS06868.1| ribosomal protein S6 [Shewanella baltica OS185]
gi|160859385|gb|ABX47919.1| ribosomal protein S6 [Shewanella baltica OS195]
gi|217497058|gb|ACK45251.1| ribosomal protein S6 [Shewanella baltica OS223]
gi|304350379|gb|EFM14782.1| ribosomal protein S6 [Shewanella baltica OS183]
gi|306910772|gb|EFN41200.1| ribosomal protein S6 [Shewanella baltica BA175]
gi|315266090|gb|ADT92943.1| ribosomal protein S6 [Shewanella baltica OS678]
Length = 131
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G + + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPILDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL--LVDSHEQSPTLTIQRHDRDDR 112
V MN+ + I E++ R ++ VLR++ + V E SP + R +RD R
Sbjct: 60 VLMNVEAKAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP-MAKARDERDSR 112
>gi|166711572|ref|ZP_02242779.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 143
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|296271510|ref|YP_003654142.1| 30S ribosomal protein S6 [Thermobispora bispora DSM 43833]
gi|296094297|gb|ADG90249.1| ribosomal protein S6 [Thermobispora bispora DSM 43833]
Length = 96
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ Q+ S+++ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRRYEMMVILDPSLDERTVEPSLDQFLSIVRNDGGTVEKVDVWGRRKLAYDIAKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ P + E+ R++ ++ENVLR+ + D H
Sbjct: 61 AVIDLTCKPETVRELDRQLNLNENVLRTKVIRPDLH 96
>gi|224510727|pdb|3FIH|F Chain F, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|251837144|pdb|3IY8|F Chain F, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
gi|294662222|pdb|2WWL|F Chain F, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387970|pdb|3OFO|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308387991|pdb|3OFP|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320028|pdb|3OFA|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320049|pdb|3OFB|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320132|pdb|3OFX|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320153|pdb|3OFY|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113617|pdb|3OAQ|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|315113638|pdb|3OAR|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The Second 70s Ribosome
Length = 100
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ V+RS+ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVM 90
>gi|171463203|ref|YP_001797316.1| ribosomal protein S6 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226695112|sp|B1XTM5|RS6_POLNS RecName: Full=30S ribosomal protein S6
gi|171192741|gb|ACB43702.1| ribosomal protein S6 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 124
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKATLAAVGGKIHRMEDWGRRQMAYMIDKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MNI + E++ + ++ VLR L + E P++ ++
Sbjct: 60 VCMNIECDQKTLEELEHAFKFNDAVLRHLIIKTKKAETEPSIMMK 104
>gi|72163494|ref|YP_291151.1| 30S ribosomal protein S6 [Thermobifida fusca YX]
gi|91207797|sp|Q47K94|RS6_THEFY RecName: Full=30S ribosomal protein S6
gi|71917226|gb|AAZ57128.1| SSU ribosomal protein S6P [Thermobifida fusca YX]
Length = 96
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Q+ S+++ GG V V+ G R +AY I KN + Y
Sbjct: 1 MRRYEVMIILDPTLDERTVAPSLEQFLSVVRNEGGSVEKVDVWGKRRLAYDIGKNSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P+ +HE+ R++ + E VLR+ L + H
Sbjct: 61 AVIDLTAKPSTVHELDRQLNLTEAVLRTKVLRPEIH 96
>gi|118594782|ref|ZP_01552129.1| 30S ribosomal protein S6 [Methylophilales bacterium HTCC2181]
gi|118440560|gb|EAV47187.1| 30S ribosomal protein S6 [Methylophilales bacterium HTCC2181]
Length = 141
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I + Q+LI+ N G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFVVHPD-QSEQVPAMIDRLQTLIKTNKGKIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E++ + ++ V+R L +P+ ++ P++
Sbjct: 60 VLMNIECSLETLAELEHSFKFNDAVIRHLVFATKLAVTNPSAMMKEEKSKSLVGDKPKEE 119
Query: 121 NVDRKQHVSEEK 132
+ + V+E K
Sbjct: 120 APVKAEAVTETK 131
>gi|149907735|ref|ZP_01896482.1| 30S ribosomal protein S6 [Moritella sp. PE36]
gi|149809405|gb|EDM69334.1| 30S ribosomal protein S6 [Moritella sp. PE36]
Length = 124
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++ E G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYSAVVTEANGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + I E++ R ++ V+RS+ L
Sbjct: 60 VLMNIEAGQDVIDELENNFRFNDAVIRSMFL 90
>gi|120609915|ref|YP_969593.1| 30S ribosomal protein S6 [Acidovorax citrulli AAC00-1]
gi|326316062|ref|YP_004233734.1| 30S ribosomal protein S6 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|166226789|sp|A1TLI1|RS6_ACIAC RecName: Full=30S ribosomal protein S6
gi|120588379|gb|ABM31819.1| SSU ribosomal protein S6P [Acidovorax citrulli AAC00-1]
gi|323372898|gb|ADX45167.1| 30S ribosomal protein S6 [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 125
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGKIHRVEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E + ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVVKKKAETGASSMMKTVEREE 110
>gi|289663136|ref|ZP_06484717.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669572|ref|ZP_06490647.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. musacearum
NCPPB4381]
gi|325915474|ref|ZP_08177788.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325917962|ref|ZP_08180131.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325535819|gb|EGD07646.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325538356|gb|EGD10038.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
Length = 143
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|260063157|ref|YP_003196237.1| 30S ribosomal protein S6 [Robiginitalea biformata HTCC2501]
gi|88783251|gb|EAR14423.1| 30S ribosomal protein S6 [Robiginitalea biformata HTCC2501]
Length = 112
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ ++++ + +NG ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIEETVKKFENFLTKNGAKMVSKEDWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I +++ + DE ++R LT+ +D H
Sbjct: 61 HLFEFTAPGEVIGPYEQEFKRDERIMRFLTVKLDKH 96
>gi|288554589|ref|YP_003426524.1| 30S ribosomal protein S6 [Bacillus pseudofirmus OF4]
gi|288545749|gb|ADC49632.1| 30S ribosomal protein S6 [Bacillus pseudofirmus OF4]
Length = 95
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I ++ ++ NG EV V E+G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIAPNLEESANKEIIERFNGVLTSNGAEVEKVEEMGKRRLAYEINDYREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V +++ + AI E R ++I++NV+R L
Sbjct: 61 VLLSVQANSEAIAEFNRLIKINDNVIRVL 89
>gi|116667415|pdb|2GY9|F Chain F, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667467|pdb|2GYB|F Chain F, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
Length = 95
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ +P I E++ R ++ V+RS+ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVM 90
>gi|58582039|ref|YP_201055.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623951|ref|YP_451323.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576348|ref|YP_001913277.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|75435315|sp|Q5H051|RS6_XANOR RecName: Full=30S ribosomal protein S6
gi|91207802|sp|Q2P328|RS6_XANOM RecName: Full=30S ribosomal protein S6
gi|226705648|sp|B2SIV0|RS6_XANOP RecName: Full=30S ribosomal protein S6
gi|58426633|gb|AAW75670.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367891|dbj|BAE69049.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520800|gb|ACD58745.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 143
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|15607195|ref|NP_214567.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Rv]
gi|15839430|ref|NP_334467.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis CDC1551]
gi|31791230|ref|NP_853723.1| 30S ribosomal protein S6 [Mycobacterium bovis AF2122/97]
gi|121635963|ref|YP_976186.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659813|ref|YP_001281336.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|148821243|ref|YP_001285997.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis F11]
gi|167970579|ref|ZP_02552856.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|215406043|ref|ZP_03418224.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 02_1987]
gi|215413914|ref|ZP_03422576.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|215425247|ref|ZP_03423166.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T92]
gi|215432962|ref|ZP_03430881.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|215448329|ref|ZP_03435081.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|218755776|ref|ZP_03534572.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis GM 1503]
gi|219555832|ref|ZP_03534908.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T17]
gi|224988436|ref|YP_002643103.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253796968|ref|YP_003029969.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
1435]
gi|254366511|ref|ZP_04982555.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis str.
Haarlem]
gi|254548985|ref|ZP_05139432.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184909|ref|ZP_05762383.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis CPHL_A]
gi|260199046|ref|ZP_05766537.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|260203194|ref|ZP_05770685.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis K85]
gi|289441420|ref|ZP_06431164.1| SSU ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|289445579|ref|ZP_06435323.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis CPHL_A]
gi|289552302|ref|ZP_06441512.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
605]
gi|289567939|ref|ZP_06448166.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T17]
gi|289572629|ref|ZP_06452856.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis K85]
gi|289747822|ref|ZP_06507200.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
02_1987]
gi|289748518|ref|ZP_06507896.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T92]
gi|289756112|ref|ZP_06515490.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|289760151|ref|ZP_06519529.1| ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|289764167|ref|ZP_06523545.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis GM
1503]
gi|294995669|ref|ZP_06801360.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 210]
gi|297632524|ref|ZP_06950304.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN 4207]
gi|297729495|ref|ZP_06958613.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN R506]
gi|298527451|ref|ZP_07014860.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|306778344|ref|ZP_07416681.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu001]
gi|306778875|ref|ZP_07417212.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu002]
gi|306782664|ref|ZP_07420986.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu003]
gi|306787030|ref|ZP_07425352.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu004]
gi|306791588|ref|ZP_07429890.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu005]
gi|306795651|ref|ZP_07433953.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu006]
gi|306801626|ref|ZP_07438294.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu008]
gi|306805835|ref|ZP_07442503.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu007]
gi|306970232|ref|ZP_07482893.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu009]
gi|306974465|ref|ZP_07487126.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu010]
gi|307082173|ref|ZP_07491343.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu011]
gi|307082513|ref|ZP_07491626.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu012]
gi|313656824|ref|ZP_07813704.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN V2475]
gi|54039531|sp|P66592|RS6_MYCBO RecName: Full=30S ribosomal protein S6
gi|54041974|sp|P66591|RS6_MYCTU RecName: Full=30S ribosomal protein S6
gi|166227352|sp|A1KEM1|RS6_MYCBP RecName: Full=30S ribosomal protein S6
gi|166227353|sp|A5TYC4|RS6_MYCTA RecName: Full=30S ribosomal protein S6
gi|254765446|sp|C1AJ76|RS6_MYCBT RecName: Full=30S ribosomal protein S6
gi|1568592|emb|CAB02531.1| PROBABLE 30S RIBOSOMAL PROTEIN S6 RPSF [Mycobacterium
tuberculosis H37Rv]
gi|13879102|gb|AAK44281.1| ribosomal protein S6 [Mycobacterium tuberculosis CDC1551]
gi|31616815|emb|CAD92916.1| PROBABLE 30S RIBOSOMAL PROTEIN S6 RPSF [Mycobacterium bovis
AF2122/97]
gi|121491610|emb|CAL70068.1| Probable 30s ribosomal protein s6 rpsF [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|134152023|gb|EBA44068.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis str.
Haarlem]
gi|148503965|gb|ABQ71774.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|148719770|gb|ABR04395.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis F11]
gi|224771549|dbj|BAH24355.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253318471|gb|ACT23074.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
1435]
gi|289414339|gb|EFD11579.1| SSU ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|289418537|gb|EFD15738.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis CPHL_A]
gi|289436934|gb|EFD19427.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
605]
gi|289537060|gb|EFD41638.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis K85]
gi|289541692|gb|EFD45341.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T17]
gi|289688350|gb|EFD55838.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
02_1987]
gi|289689105|gb|EFD56534.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T92]
gi|289696699|gb|EFD64128.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|289711673|gb|EFD75689.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis GM
1503]
gi|289715715|gb|EFD79727.1| ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|298497245|gb|EFI32539.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|308213487|gb|EFO72886.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu001]
gi|308328204|gb|EFP17055.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu002]
gi|308332510|gb|EFP21361.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu003]
gi|308336322|gb|EFP25173.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu004]
gi|308339925|gb|EFP28776.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu005]
gi|308343941|gb|EFP32792.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu006]
gi|308347724|gb|EFP36575.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu007]
gi|308351641|gb|EFP40492.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu008]
gi|308352348|gb|EFP41199.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu009]
gi|308356248|gb|EFP45099.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu010]
gi|308360239|gb|EFP49090.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu011]
gi|308367740|gb|EFP56591.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu012]
gi|323717392|gb|EGB26597.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
CDC1551A]
gi|326905813|gb|EGE52746.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis W-148]
gi|328456758|gb|AEB02181.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
4207]
Length = 96
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGKRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|325922528|ref|ZP_08184289.1| SSU ribosomal protein S6P [Xanthomonas gardneri ATCC 19865]
gi|325546993|gb|EGD18086.1| SSU ribosomal protein S6P [Xanthomonas gardneri ATCC 19865]
Length = 144
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV +
Sbjct: 5 YEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 64 NIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|328883729|emb|CCA56968.1| SSU ribosomal protein S6p [Streptomyces venezuelae ATCC 10712]
Length = 96
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|119776196|ref|YP_928936.1| 30S ribosomal protein S6 [Shewanella amazonensis SB2B]
gi|166227380|sp|A1SA60|RS6_SHEAM RecName: Full=30S ribosomal protein S6
gi|119768696|gb|ABM01267.1| SSU ribosomal protein S6P [Shewanella amazonensis SB2B]
Length = 135
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I + G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGVITDANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDR 112
V MN+ + ++ E++ R ++ VLRS+ + E SP + + +RD R
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRSMVMRTKGAITEASP-MAKAKDERDAR 112
>gi|168187293|ref|ZP_02621928.1| ribosomal protein S6 [Clostridium botulinum C str. Eklund]
gi|169294825|gb|EDS76958.1| ribosomal protein S6 [Clostridium botulinum C str. Eklund]
Length = 95
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILNPSLDEEATKAAIEKFKGVIEREGGVVENVDEWGRRKLAYPINKINEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E++R RI + V+R + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVV 91
>gi|332971479|gb|EGK10430.1| 30S ribosomal protein S6 [Psychrobacter sp. 1501(2011)]
Length = 134
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S Q+ + +Y L+Q+N G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLIVHPD-QSDQVVGMVERYIKLVQDNNGMVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V NI A + E++ R ++ ++RSL + D P+ + D + R + PR
Sbjct: 60 VLFNIECDGATLEELEELFRYNDAIIRSLVVRRDDAITEPSQLAKSAD-EKRARKAPRSE 118
Query: 121 N 121
N
Sbjct: 119 N 119
>gi|29830832|ref|NP_825466.1| 30S ribosomal protein S6 [Streptomyces avermitilis MA-4680]
gi|61216299|sp|Q82FG4|RS6_STRAW RecName: Full=30S ribosomal protein S6
gi|29607945|dbj|BAC72001.1| putative ribosomal protein S6 [Streptomyces avermitilis MA-4680]
gi|320009724|gb|ADW04574.1| ribosomal protein S6 [Streptomyces flavogriseus ATCC 33331]
Length = 96
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|290959030|ref|YP_003490212.1| 30S ribosomal protein S6 [Streptomyces scabiei 87.22]
gi|260648556|emb|CBG71667.1| putative 30S ribosomal protein S6 [Streptomyces scabiei 87.22]
Length = 96
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|239942697|ref|ZP_04694634.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
gi|239989156|ref|ZP_04709820.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 11379]
gi|291446161|ref|ZP_06585551.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
gi|291349108|gb|EFE76012.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
Length = 96
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|145297776|ref|YP_001140617.1| 30S ribosomal protein S6 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166226796|sp|A4SIZ7|RS6_AERS4 RecName: Full=30S ribosomal protein S6
gi|142850548|gb|ABO88869.1| ribosomal protein S6 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 129
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITTAGGTIHRMEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MN+ + A I E++ R ++ V+R++ +
Sbjct: 60 VLMNVEAEQAVIDELETNFRFNDAVIRNMIM 90
>gi|121607969|ref|YP_995776.1| 30S ribosomal protein S6 [Verminephrobacter eiseniae EF01-2]
gi|166227400|sp|A1WGK1|RS6_VEREI RecName: Full=30S ribosomal protein S6
gi|121552609|gb|ABM56758.1| SSU ribosomal protein S6P [Verminephrobacter eiseniae EF01-2]
Length = 141
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHRVEDWGRRQLAYLINKLSKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ P+ ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVHKKKAVTGPSAMMKTVEREE 110
>gi|148653437|ref|YP_001280530.1| 30S ribosomal protein S6 [Psychrobacter sp. PRwf-1]
gi|189045489|sp|A5WFY9|RS6_PSYWF RecName: Full=30S ribosomal protein S6
gi|148572521|gb|ABQ94580.1| SSU ribosomal protein S6P [Psychrobacter sp. PRwf-1]
Length = 134
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S Q+ + +Y L+Q+N G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLIVHPD-QSDQVVGMVERYIKLVQDNNGMVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V NI A + E++ R ++ ++RSL + D P+ + D + R + PR
Sbjct: 60 VLFNIECDGATLEELEELFRYNDAIIRSLVVRRDDAITEPSQLAKSAD-EKRARKAPRSE 118
Query: 121 N 121
N
Sbjct: 119 N 119
>gi|312889161|ref|ZP_07748718.1| SSU ribosomal protein S6P [Mucilaginibacter paludis DSM 18603]
gi|311298323|gb|EFQ75435.1| SSU ribosomal protein S6P [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S + K+ + ++ ++ +NG E+ + G+R +AY I K YY
Sbjct: 1 MQQYETVIILTPLLSVETAKEAVAKFTKILTDNGAEIIQEDNWGLRKLAYPIEKKTTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P I++++ + R DE ++R LT+ +D H +
Sbjct: 61 HLTEFKAPGELINKLEIEYRRDERIMRFLTIALDKHATA 99
>gi|194246578|ref|YP_002004217.1| 30S ribosomal protein S6 [Candidatus Phytoplasma mali]
gi|254765447|sp|B3R0K3|RS6_PHYMT RecName: Full=30S ribosomal protein S6
gi|193806935|emb|CAP18367.1| 30S ribosomal protein S6 [Candidatus Phytoplasma mali]
Length = 94
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I ++IK + + N ++ ELG++ +AY I K+ K YY
Sbjct: 1 MKKYEILYIMRPNIGDEEIKKNVETINKIFYNNENKIIQSKELGLKDLAYCIDKHYKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + + P I E R ++I+E+++RS+ +
Sbjct: 61 VSMFLNAMPQMIEEFNRVVKINEDIIRSIVI 91
>gi|258517419|ref|YP_003193641.1| 30S ribosomal protein S6 [Desulfotomaculum acetoxidans DSM 771]
gi|257781124|gb|ACV65018.1| ribosomal protein S6 [Desulfotomaculum acetoxidans DSM 771]
Length = 95
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ D+ +Q I +++ +I+ NGGE+ +++ G R +AY I R YY
Sbjct: 1 MRNYETLFIIKADLEEEQTTAVIEKFKGIIEANGGEITKLDKWGKRRLAYEINHMRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + E+ R +I + V+R + +
Sbjct: 61 VCVKFKAGSETSQELDRVFKITDEVIRHVII 91
>gi|254430019|ref|ZP_05043726.1| ribosomal protein S6 [Alcanivorax sp. DG881]
gi|196196188|gb|EDX91147.1| ribosomal protein S6 [Alcanivorax sp. DG881]
Length = 113
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +++ + G + V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI + E++ R ++ V+R L + D+ P+ + +HD
Sbjct: 60 VMLNIECDGETLGELENTFRFNDAVIRHLVIRRDNAVTEPS-PLAKHD 106
>gi|182437467|ref|YP_001825186.1| 30S ribosomal protein S6 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778122|ref|ZP_08237387.1| 30S ribosomal protein S6 [Streptomyces cf. griseus XylebKG-1]
gi|226695288|sp|B1VPC4|RS6_STRGG RecName: Full=30S ribosomal protein S6
gi|178465983|dbj|BAG20503.1| putative 30S ribosomal protein S6 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658455|gb|EGE43301.1| 30S ribosomal protein S6 [Streptomyces cf. griseus XylebKG-1]
Length = 96
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGDGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|313674401|ref|YP_004052397.1| SSU ribosomal protein s6p [Marivirga tractuosa DSM 4126]
gi|312941099|gb|ADR20289.1| SSU ribosomal protein S6P [Marivirga tractuosa DSM 4126]
Length = 123
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE VF+L +S Q+KD + +++ ++++ E+ V + G++ +AY I+ +Y
Sbjct: 3 LKNYETVFILTPVLSDAQMKDAVDKFRKVLEDKKAEIINVEQWGLKKLAYPIQHKSTGFY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P + ++ + R DE ++R LT+ +D H
Sbjct: 63 NLIEFKATPEVVAALELEYRRDEKIMRFLTVALDKH 98
>gi|258546024|ref|ZP_05706258.1| 30S ribosomal protein S6 [Cardiobacterium hominis ATCC 15826]
gi|258518753|gb|EEV87612.1| 30S ribosomal protein S6 [Cardiobacterium hominis ATCC 15826]
Length = 110
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ +Y+ +++ G+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVNAMSERYRGIVEAAKGKVHRFEDWGRRVLAYPINKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V MNI A + E++ R ++ +LR LT+ D E SP
Sbjct: 60 VMMNIECDAATLAELENNFRFNDAILRHLTIRRDEAVTEASP 101
>gi|294673369|ref|YP_003573985.1| 30S ribosomal protein S6 [Prevotella ruminicola 23]
gi|294472198|gb|ADE81587.1| ribosomal protein S6 [Prevotella ruminicola 23]
Length = 114
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S +Q+K+T +++ ++ + G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDEQMKETAAKFKKVLTDKGAEI--INEEAWGLKKMAYAIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I ++ R DE V+R T+ +D +
Sbjct: 59 FYCLVEFKAEPEVIKTLETAFRRDEKVIRFQTVKLDKY 96
>gi|238757531|ref|ZP_04618716.1| 30S ribosomal protein S6 [Yersinia aldovae ATCC 35236]
gi|238764706|ref|ZP_04625650.1| 30S ribosomal protein S6 [Yersinia kristensenii ATCC 33638]
gi|238783559|ref|ZP_04627581.1| 30S ribosomal protein S6 [Yersinia bercovieri ATCC 43970]
gi|238787553|ref|ZP_04631351.1| 30S ribosomal protein S6 [Yersinia frederiksenii ATCC 33641]
gi|238792977|ref|ZP_04636606.1| 30S ribosomal protein S6 [Yersinia intermedia ATCC 29909]
gi|238797594|ref|ZP_04641091.1| 30S ribosomal protein S6 [Yersinia mollaretii ATCC 43969]
gi|238697102|gb|EEP89875.1| 30S ribosomal protein S6 [Yersinia kristensenii ATCC 33638]
gi|238704293|gb|EEP96825.1| 30S ribosomal protein S6 [Yersinia aldovae ATCC 35236]
gi|238715614|gb|EEQ07604.1| 30S ribosomal protein S6 [Yersinia bercovieri ATCC 43970]
gi|238718591|gb|EEQ10410.1| 30S ribosomal protein S6 [Yersinia mollaretii ATCC 43969]
gi|238724340|gb|EEQ15982.1| 30S ribosomal protein S6 [Yersinia frederiksenii ATCC 33641]
gi|238727577|gb|EEQ19102.1| 30S ribosomal protein S6 [Yersinia intermedia ATCC 29909]
Length = 122
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y + I G + + + G R +AY I K KA+YV +N+ +P AI E+
Sbjct: 7 SEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQEAIDEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ R ++ V+RS+ + V E SP + + +R +R+D F + N D + SEE
Sbjct: 67 ETNFRFNDAVIRSMVMRVKHAVTEASP-MVKAKDERRERHD-FASEANDDSEAGDSEE 122
>gi|153803834|ref|ZP_01958420.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
gi|124120632|gb|EAY39375.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
Length = 108
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y I E GG++ + + G R +AY I K KA+YV MN+ + A + E+
Sbjct: 1 SEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEADQAVVDEL 60
Query: 76 KRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ R ++ VLR++ + + P++ ++ + + D D +V+
Sbjct: 61 ETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDADVE 108
>gi|313202817|ref|YP_004041474.1| SSU ribosomal protein s6p [Paludibacter propionicigenes WB4]
gi|312442133|gb|ADQ78489.1| SSU ribosomal protein S6P [Paludibacter propionicigenes WB4]
Length = 116
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S Q+K+ + ++++++ ENG + G+R + Y I+K +Y +
Sbjct: 5 YETVFILTPVLSDVQMKEAVEKFKTILTENGATITNEENWGLRKLQYPIQKKSTGFYSLL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P I ++ + R DE VLR L+ +D +
Sbjct: 65 QFDAEPTVIATLETQFRRDERVLRFLSFRLDKY 97
>gi|57242165|ref|ZP_00370105.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis
RM3195]
gi|57017357|gb|EAL54138.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis
RM3195]
Length = 125
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E++ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVSAKLEFVKEILSKNGAEIQTVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|193214372|ref|YP_001995571.1| 30S ribosomal protein S6 [Chloroherpeton thalassium ATCC 35110]
gi|254765229|sp|B3QVR7|RS6_CHLT3 RecName: Full=30S ribosomal protein S6
gi|193087849|gb|ACF13124.1| ribosomal protein S6 [Chloroherpeton thalassium ATCC 35110]
Length = 133
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I T+ + LI G EV+ V ++G + +AY I K YYV
Sbjct: 3 KLYETTIVVDGGLDESVIAATVEKVTGLITSLGCEVKTVLDVGRKNLAYPIGKATIGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ S A+ E++R+ R++E+++R LT+++D
Sbjct: 63 HIEFESDGTALKELERQYRLNESIIRFLTIILD 95
>gi|162662263|gb|EDQ49163.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 141
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 22 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHREEDWGRRQLAYMINKLAKAHY 80
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ + +P+ ++ +R++
Sbjct: 81 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKADTAPSSMMKTVEREE 131
>gi|110638977|ref|YP_679186.1| 30S ribosomal protein S6 [Cytophaga hutchinsonii ATCC 33406]
gi|110281658|gb|ABG59844.1| SSU ribosomal protein S6P [Cytophaga hutchinsonii ATCC 33406]
Length = 121
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
+K YE VF+L +S Q+KD +++ ++ +NG ++VNE G+R +AY I+K
Sbjct: 3 LKQYETVFILTPVLSDSQMKDAAQKFKQVLVDNGA--KIVNEESWGLRKLAYPIQKKNTG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + + I+ ++ + R DE ++R LT +D H
Sbjct: 61 FYHLVEFEAATSVINTLETEYRRDERIMRFLTTALDKH 98
>gi|291515312|emb|CBK64522.1| SSU ribosomal protein S6P [Alistipes shahii WAL 8301]
Length = 114
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+++ ++Q +I ENGG++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVQEVADKFQGVITENGGQIVNKESWGLRKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + ++ ++ + R DE V+R LT D +
Sbjct: 61 FLVEFTGEGSLVNTLETQYRRDERVIRFLTFKQDKY 96
>gi|297569120|ref|YP_003690464.1| ribosomal protein S6 [Desulfurivibrio alkaliphilus AHT2]
gi|296925035|gb|ADH85845.1| ribosomal protein S6 [Desulfurivibrio alkaliphilus AHT2]
Length = 134
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 1 MKLYEHVFLLRQDISSQ-QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M+ YE V ++R S+ ++ I +Y +I + GE+ V+ G++ +AY I K +
Sbjct: 1 MRNYESVIIVRPSAGSEAELTGVIDKYSGVITAHEGEIGGVDRWGLKKLAYPISKETQGV 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
Y+ + P I E++R +RID+ +L+ LT+ + + E++P
Sbjct: 61 YLLFRYTTSPDGIKELERLLRIDDRILKFLTVKL-TGEEAP 100
>gi|23100934|ref|NP_694401.1| 30S ribosomal protein S6 [Oceanobacillus iheyensis HTE831]
gi|32171554|sp|Q8EKV4|RS6_OCEIH RecName: Full=30S ribosomal protein S6
gi|22779169|dbj|BAC15435.1| 30S ribosomal protein S6 [Oceanobacillus iheyensis HTE831]
Length = 95
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + I ++ +++ +NG E+ V+E G R +AY I R YY
Sbjct: 1 MRKYEIMYIIRPDIEEEAQTALIERFNTILTDNGAEIDKVDEKGKRRLAYEINDYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N AI+E R + +++++R + +
Sbjct: 61 VIINFRGSEEAINEFDRLAKFNDDIIRHMAI 91
>gi|240168783|ref|ZP_04747442.1| 30S ribosomal protein S6 [Mycobacterium kansasii ATCC 12478]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMIILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGRRRLAYEIAKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVVDLKAAPATVSELDRQLSLNESVLRTKVMRADKH 96
>gi|160900661|ref|YP_001566243.1| 30S ribosomal protein S6 [Delftia acidovorans SPH-1]
gi|226703450|sp|A9BNG3|RS6_DELAS RecName: Full=30S ribosomal protein S6
gi|160366245|gb|ABX37858.1| ribosomal protein S6 [Delftia acidovorans SPH-1]
Length = 120
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ + +P+ ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKADTAPSSMMKTVEREE 110
>gi|110835052|ref|YP_693911.1| 30S ribosomal protein S6 [Alcanivorax borkumensis SK2]
gi|123345339|sp|Q0VMF9|RS6_ALCBS RecName: Full=30S ribosomal protein S6
gi|110648163|emb|CAL17639.1| 30S ribosomal protein S6 [Alcanivorax borkumensis SK2]
Length = 113
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +++ + G + V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI + E++ R ++ V+R L + D+ P+ + +HD
Sbjct: 60 VMLNIECDGETLGELENTFRFNDAVIRHLVIRRDNAITEPS-PLAKHD 106
>gi|33862262|ref|NP_893823.1| 30S ribosomal protein S6 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|61216282|sp|Q7UZG1|RS6_PROMP RecName: Full=30S ribosomal protein S6
gi|33634480|emb|CAE20165.1| 30S ribosomal protein S6 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 154
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 67/111 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E+GG++ G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEDEVTNHIDKYNKLLEESGGKILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ I ++++ MR+ E+V+R LT+ + +P + + +++ ++ D
Sbjct: 67 SHQGDGQHIFKIEKAMRLSEDVIRYLTVKQEGPLPTPRSSNKGYNQSEKKD 117
>gi|291614208|ref|YP_003524365.1| ribosomal protein S6 [Sideroxydans lithotrophicus ES-1]
gi|291584320|gb|ADE11978.1| ribosomal protein S6 [Sideroxydans lithotrophicus ES-1]
Length = 128
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYRTLVTSKNGHIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MNI + E++ + ++ VLR LT+ + +P+
Sbjct: 60 VLMNIEVDQPTLDELEHAFKFNDAVLRHLTIKTKAAVVTPS 100
>gi|323703278|ref|ZP_08114929.1| ribosomal protein S6 [Desulfotomaculum nigrificans DSM 574]
gi|323531743|gb|EGB21631.1| ribosomal protein S6 [Desulfotomaculum nigrificans DSM 574]
Length = 95
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ D+ +Q+ + +++ L++ G EV +++ G R +AY + R+ Y
Sbjct: 1 MRNYEVMYIVKPDVEDEQLNALVERFKGLVENQGAEVTKLDKWGKRRLAYEVNHLREGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + PAA E+ R ++I ++++R + +
Sbjct: 61 VVMQFKAEPAAAAELDRVLKISDDIIRHIIV 91
>gi|271970522|ref|YP_003344718.1| 30S ribosomal protein S6 [Streptosporangium roseum DSM 43021]
gi|270513697|gb|ACZ91975.1| 30S ribosomal protein S6 [Streptosporangium roseum DSM 43021]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Q+ ++++ +GG V V+ G R ++Y I K + Y
Sbjct: 1 MRRYEMMVILDPSLDERTVAPSLDQFLTVVRNDGGSVEKVDVWGRRRLSYDIDKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E +LR+ L D H
Sbjct: 61 AVIDLTAEPATVKELDRQMNLNEGILRTKVLRPDVH 96
>gi|284034857|ref|YP_003384788.1| 30S ribosomal protein S6 [Kribbella flavida DSM 17836]
gi|283814150|gb|ADB35989.1| ribosomal protein S6 [Kribbella flavida DSM 17836]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ QY +++++ GG V ++ G R +AY ++K + Y
Sbjct: 1 MRRYEVMVILDPELEERTVEPSLDQYLNIVRKEGGTVEKLDIWGRRKLAYDVKKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E++LR+ + D H
Sbjct: 61 AVIDLTAEPAVVKELDRQLTLNESILRTKVIRPDQH 96
>gi|239980814|ref|ZP_04703338.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
gi|291452673|ref|ZP_06592063.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
gi|291355622|gb|EFE82524.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVAPLIENFLSVVREADGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|225011729|ref|ZP_03702167.1| ribosomal protein S6 [Flavobacteria bacterium MS024-2A]
gi|225004232|gb|EEG42204.1| ribosomal protein S6 [Flavobacteria bacterium MS024-2A]
Length = 112
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++ + ++ I+ N G + G++ +AY I + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIEEAVQKFVEFIKTNQGSMTSQENWGLKKLAYPIENKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
A+P A+ ++ + R DE ++R LT+ +D H
Sbjct: 61 HLFEYAAPSEAVAALEVEFRRDERIMRYLTVKLDKH 96
>gi|320095142|ref|ZP_08026850.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977924|gb|EFW09559.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + T+ +Y + + GG V V+ G R +AY I K + Y
Sbjct: 1 MRKYELMVILDPSIDERTVAPTMEKYLAPVTAGGGSVENVDVWGKRRLAYDILKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + P E+ R+M IDE +LR+ L D+H
Sbjct: 61 VVIDMTTTPEVALEINRRMGIDETILRTKLLRPDAH 96
>gi|313902807|ref|ZP_07836204.1| SSU ribosomal protein S6P [Thermaerobacter subterraneus DSM
13965]
gi|313466927|gb|EFR62444.1| SSU ribosomal protein S6P [Thermaerobacter subterraneus DSM
13965]
Length = 97
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ R D+ + K + + Q +I + GG V V+ G R +AY I R+ +Y
Sbjct: 1 MRAYELMYITRPDLDEEAEKALLDRLQKIITDGGGTVEQVDVWGRRRLAYEIAGYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ P HE++R +RI ++++R + +L
Sbjct: 61 TVVQFQGPAGVTHELERVIRITDDIIRHIIVL 92
>gi|56965864|ref|YP_177598.1| 30S ribosomal protein S6 [Bacillus clausii KSM-K16]
gi|61215393|sp|Q5WAH3|RS6_BACSK RecName: Full=30S ribosomal protein S6
gi|56912110|dbj|BAD66638.1| 30S ribosomal protein S6 [Bacillus clausii KSM-K16]
Length = 95
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 55/90 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I +Y ++ +NG E+ V+E+G + +AY I + +Y
Sbjct: 1 MRKYEIMYIIAPNLEESANKEIIERYNKVLTDNGAEILKVDEIGKKRLAYEINDFKDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +++ + AI+E R ++I++NV+R L
Sbjct: 61 VLLSVQANTEAINEFNRLIKINDNVIRVLV 90
>gi|226941618|ref|YP_002796692.1| 30S ribosomal protein S6 [Laribacter hongkongensis HLHK9]
gi|254765441|sp|C1DCR4|RS6_LARHH RecName: Full=30S ribosomal protein S6
gi|226716545|gb|ACO75683.1| RpsF [Laribacter hongkongensis HLHK9]
Length = 125
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKGMVLGQNGKIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MNI + E++ + ++ VLR LT+ +D E SP +
Sbjct: 60 VMMNIECGKETLEEIEHAFKFNDAVLRHLTIKMDRAVTEASPMM 103
>gi|121595519|ref|YP_987415.1| 30S ribosomal protein S6 [Acidovorax sp. JS42]
gi|222111740|ref|YP_002554004.1| 30S ribosomal protein s6 [Acidovorax ebreus TPSY]
gi|166226793|sp|A1WAR4|RS6_ACISJ RecName: Full=30S ribosomal protein S6
gi|254765435|sp|B9MDJ5|RS6_DIAST RecName: Full=30S ribosomal protein S6
gi|120607599|gb|ABM43339.1| SSU ribosomal protein S6P [Acidovorax sp. JS42]
gi|221731184|gb|ACM34004.1| ribosomal protein S6 [Acidovorax ebreus TPSY]
Length = 125
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIVAGGGQVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E + ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGASSMMKTVEREE 110
>gi|160872394|ref|ZP_02062526.1| ribosomal protein S6 [Rickettsiella grylli]
gi|159121193|gb|EDP46531.1| ribosomal protein S6 [Rickettsiella grylli]
Length = 128
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y ++++ +GG+V + G R I + I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSDQVSAMVQRYTTIVKNSGGKVHRFEDWGRRQICFPINKLPKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
+ MN+ A+ E+ R ++ VLR L + VD QSP
Sbjct: 60 ILMNVECGKEAMAELTDNFRFNDAVLRQLIIKVDKAITGQSP 101
>gi|257453410|ref|ZP_05618705.1| 30S ribosomal protein S6 [Enhydrobacter aerosaccus SK60]
gi|257449162|gb|EEV24110.1| 30S ribosomal protein S6 [Enhydrobacter aerosaccus SK60]
Length = 142
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y +L++E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYINLVKEQGGAIHRLEDWGRRQLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V +NI + + E++ R ++ ++RSL + D E+SP
Sbjct: 60 VLLNIEAGQQTLDELEELFRYNDAIIRSLVIRRDEAITEESP 101
>gi|116782633|gb|ABK22584.1| unknown [Picea sitchensis]
Length = 289
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++L+ +D ++ ++++ + + + ++E G++ +N+ GMR +AY+I K +KA Y+ M
Sbjct: 137 YEIMYLIHED-NADEVQEVVSKVKDFVEEKKGKIWRLNDWGMRRLAYKIEKAKKANYILM 195
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
NI I+++K DE V+R L +
Sbjct: 196 NIEMGAEHINDLKTLFDKDERVIRHLVM 223
>gi|320528727|ref|ZP_08029879.1| ribosomal protein S6 [Solobacterium moorei F0204]
gi|320130937|gb|EFW23515.1| ribosomal protein S6 [Solobacterium moorei F0204]
Length = 137
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + +++ + I +I +NGG++ +E GMR AY I +K YY
Sbjct: 37 MKKYEVMYIINESVETEKRAELIETLSKIITDNGGKIAKTDEWGMREFAYHIDDMKKGYY 96
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V + A + E R M I+ NV+R +
Sbjct: 97 VVTAFEADNACVKEFDRLMGINANVVRFM 125
>gi|300771166|ref|ZP_07081042.1| 30S ribosomal protein S6 [Sphingobacterium spiritivorum ATCC
33861]
gi|300761836|gb|EFK58656.1| 30S ribosomal protein S6 [Sphingobacterium spiritivorum ATCC
33861]
Length = 122
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S K+ I ++++++ E G E+ + G++ +AY I+K +Y
Sbjct: 1 MQQYESVIILTPLLSDDVAKEVIAKFKNILTEGGAEIVAEDNWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I +++ ++R DE V+R LT+ +D H
Sbjct: 61 HLTEFKAPGELIKKIEIELRRDERVMRFLTIALDKH 96
>gi|189425663|ref|YP_001952840.1| 30S ribosomal protein S6 [Geobacter lovleyi SZ]
gi|226703472|sp|B3E6H3|RS6_GEOLS RecName: Full=30S ribosomal protein S6
gi|189421922|gb|ACD96320.1| ribosomal protein S6 [Geobacter lovleyi SZ]
Length = 122
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ D++ +K + Q ++ G+ +++ G R +AY IRK + Y
Sbjct: 1 MRKYETIFILQPDLAEDDVKSVTDKVQDVVASLKGDFHRLDDWGTRKLAYAIRKFPRGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + E++R++R+DE VLR L++
Sbjct: 61 YYLRFDGGAQLVAELERRLRLDEKVLRFLSV 91
>gi|241668462|ref|ZP_04756040.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876996|ref|ZP_05249706.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843017|gb|EET21431.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 111
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S+Q+ + +Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSEQLDAMLSKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI ++ +++ ++ ++ VLR L + P++ ++ ++++
Sbjct: 60 VLFNIECDVESLEKLQENLKYNDAVLRRLVISKKEAVTEPSIMMETNEKE 109
>gi|260893968|ref|YP_003240065.1| ribosomal protein S6 [Ammonifex degensii KC4]
gi|260866109|gb|ACX53215.1| ribosomal protein S6 [Ammonifex degensii KC4]
Length = 95
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + ++ + +++ ++++ GG V ++ G R +AY I K R+ Y
Sbjct: 1 MRAYETMYIVRPQVEGEALEAVVEKFKKIVEDGGGTVVSIDRWGKRRLAYPIEKEREGQY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ M + P + E+ R +I +VLR + +
Sbjct: 61 IVMRFQAEPPVVQELDRVFKITGDVLRHIIV 91
>gi|220933168|ref|YP_002510076.1| ribosomal protein S6 [Halothermothrix orenii H 168]
gi|219994478|gb|ACL71081.1| ribosomal protein S6 [Halothermothrix orenii H 168]
Length = 95
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+++ D+ + + + + + +I NGG+V V+E G R +AY I+ YY
Sbjct: 1 MRAYETTFIIKPDLEEEARNNILDRVKEIIDTNGGKVNEVDEWGDRNLAYEIKNYNTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I EM+R + ++VLR L +
Sbjct: 61 TLIKFEGEAETIDEMERYFNLTDSVLRYLVI 91
>gi|86151148|ref|ZP_01069364.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152790|ref|ZP_01070995.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612432|ref|YP_001000748.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
81-176]
gi|153951510|ref|YP_001397814.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415331|ref|YP_001482587.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
81116]
gi|167005668|ref|ZP_02271426.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|283956467|ref|ZP_06373947.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315124555|ref|YP_004066559.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|166226817|sp|A7H2T4|RS6_CAMJD RecName: Full=30S ribosomal protein S6
gi|166226818|sp|A1W057|RS6_CAMJJ RecName: Full=30S ribosomal protein S6
gi|189045458|sp|A8FMC3|RS6_CAMJ8 RecName: Full=30S ribosomal protein S6
gi|85842318|gb|EAQ59564.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843675|gb|EAQ60885.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249295|gb|EAQ72256.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|152938956|gb|ABS43697.1| ribosomal protein S6 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386295|gb|ABV52610.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81116]
gi|283792187|gb|EFC30976.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315018277|gb|ADT66370.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315932205|gb|EFV11148.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 327]
Length = 125
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|238926738|ref|ZP_04658498.1| ribosomal protein S6 [Selenomonas flueggei ATCC 43531]
gi|238885270|gb|EEQ48908.1| ribosomal protein S6 [Selenomonas flueggei ATCC 43531]
Length = 135
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++LYE +F+++ + + I ++ LIQ NGG++ + G + +AY I+ + YY
Sbjct: 39 VRLYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGKIEKEDRWGKKRLAYEIKDMTEGYY 97
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
V + + + PA + E R M+I +++L+ + + D E+
Sbjct: 98 VLLYVNAEPACVAECDRVMKITDDLLKHMIVRADGIEE 135
>gi|326492696|dbj|BAJ90204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 303
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D ++++D + + Q I+E G + VN G+R +AY+I+K A Y
Sbjct: 118 MRHYEVVYLIHED-RVEEVEDVVSKVQDFIREKKGRIWRVNNWGLRRLAYKIKKATHANY 176
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN +I++ K + DE ++R L +
Sbjct: 177 ILMNFEIQAQSINDFKTLLDKDERIIRHLVM 207
>gi|167754092|ref|ZP_02426219.1| hypothetical protein ALIPUT_02380 [Alistipes putredinis DSM
17216]
gi|167658717|gb|EDS02847.1| hypothetical protein ALIPUT_02380 [Alistipes putredinis DSM
17216]
Length = 114
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+K+ ++Q +I ENGG++ G++ +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVKEVADKFQGVITENGGQIVNSEAWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + ++ ++ + R DE ++R LT
Sbjct: 61 FLIEFTGEGSIVNTLETQYRRDERIIRFLTF 91
>gi|53715146|ref|YP_101138.1| 30S ribosomal protein S6 [Bacteroides fragilis YCH46]
gi|60683082|ref|YP_213226.1| 30S ribosomal protein S6 [Bacteroides fragilis NCTC 9343]
gi|253566276|ref|ZP_04843730.1| 30S ribosomal protein S6 [Bacteroides sp. 3_2_5]
gi|255011272|ref|ZP_05283398.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
gi|265766976|ref|ZP_06094805.1| ribosomal protein S6 [Bacteroides sp. 2_1_16]
gi|313149084|ref|ZP_07811277.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
gi|61215472|sp|Q64PH7|RS6_BACFR RecName: Full=30S ribosomal protein S6
gi|81313864|sp|Q5L9B5|RS6_BACFN RecName: Full=30S ribosomal protein S6
gi|52218011|dbj|BAD50604.1| 30S ribosomal protein S6 [Bacteroides fragilis YCH46]
gi|60494516|emb|CAH09313.1| putative 30S ribosomal protein S6 [Bacteroides fragilis NCTC
9343]
gi|251945380|gb|EES85818.1| 30S ribosomal protein S6 [Bacteroides sp. 3_2_5]
gi|263253353|gb|EEZ24829.1| ribosomal protein S6 [Bacteroides sp. 2_1_16]
gi|301164597|emb|CBW24156.1| putative 30S ribosomal protein S6 [Bacteroides fragilis 638R]
gi|313137851|gb|EFR55211.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
Length = 114
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++Q G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT +D +
Sbjct: 59 FYQLIEFNAEPTVIDKLELNFRRDERVIRFLTFRMDKY 96
>gi|311693516|gb|ADP96389.1| ribosomal protein S6 [marine bacterium HP15]
Length = 130
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y +I E+GG+V + + G R +AY I K KA+YV MN+ AA+ E+
Sbjct: 7 SEQVPAMIERYTGVITEDGGKVHRLEDWGRRHLAYPINKIHKAHYVLMNVECSQAAMDEL 66
Query: 76 KRKMRIDENVLRSLTLLVDS 95
R ++ ++R + L D
Sbjct: 67 THNFRFNDAIIRDMILRRDG 86
>gi|227540352|ref|ZP_03970401.1| ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33300]
gi|227239676|gb|EEI89691.1| ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33300]
Length = 122
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S K+ I ++++++ E G E+ + G++ +AY I+K +Y
Sbjct: 1 MQQYESVIILTPLLSDDVAKEVIAKFKNILTEGGAEIVAEDNWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I +++ ++R DE V+R LT+ +D H
Sbjct: 61 HLTEFKAPGELIRKIEIELRRDERVMRFLTIALDKH 96
>gi|114332339|ref|YP_748561.1| 30S ribosomal protein S6 [Nitrosomonas eutropha C91]
gi|122313013|sp|Q0ADI6|RS6_NITEC RecName: Full=30S ribosomal protein S6
gi|114309353|gb|ABI60596.1| SSU ribosomal protein S6P [Nitrosomonas eutropha C91]
Length = 144
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S+Q+ I +Y ++I E G + + + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIIFIVHPD-QSEQVSAMIERYSNMITERSGGIHRLEDWGRRQLTYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI +++E++ + ++ +LR L + ++ +P+ +Q
Sbjct: 60 ILMNIECDQESLNELEHSFKFNDAILRHLVIRMNGPVTTPSPMMQ 104
>gi|255321380|ref|ZP_05362540.1| ribosomal protein S6 [Campylobacter showae RM3277]
gi|255301533|gb|EET80790.1| ribosomal protein S6 [Campylobacter showae RM3277]
Length = 128
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG + V +G R +AY ++K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVSAKVDFVKEILTKNGANIASVQSMGTRKLAYTVKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P AI E++R +RI E++++ LT+
Sbjct: 61 FVVYFEAPTQAIAEVERIIRITEDIIKFLTV 91
>gi|325981279|ref|YP_004293681.1| 30S ribosomal protein S6 [Nitrosomonas sp. AL212]
gi|325530798|gb|ADZ25519.1| ribosomal protein S6 [Nitrosomonas sp. AL212]
Length = 139
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRGIVTSKNGKVHRVEDWGRRQLAYLIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI ++++ + + +LR LTL
Sbjct: 60 VLMNIECDQEILNDLDHAFKFSDAILRHLTL 90
>gi|305667288|ref|YP_003863575.1| 30S ribosomal protein S6 [Maribacter sp. HTCC2170]
gi|88709335|gb|EAR01568.1| 30S ribosomal protein S6 [Maribacter sp. HTCC2170]
Length = 112
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + +NG ++ G++ +AY I+ + +Y
Sbjct: 1 MNNYETVFILNPVLSDVQIEETVKKFEDFLIKNGAKMVAKENWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P I +++ R DE V+R LT+ +D H
Sbjct: 61 HLFEFTGPGEIITPYEQEFRRDERVMRFLTVKLDKH 96
>gi|150019894|ref|YP_001312148.1| 30S ribosomal protein S6 [Clostridium beijerinckii NCIMB 8052]
gi|189045460|sp|A6M3L2|RS6_CLOB8 RecName: Full=30S ribosomal protein S6
gi|149906359|gb|ABR37192.1| ribosomal protein S6 [Clostridium beijerinckii NCIMB 8052]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + +K I +++ +I+ GG V V+ G R +AY I K + +Y
Sbjct: 1 MRKYETIFILNPSFDEETVKANIEKFKGVIENGGGTVENVDFWGKRKLAYEISKVSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E+ R RI + V+R + +
Sbjct: 61 TLVNFTANPELPRELDRIFRITDGVIRHIIV 91
>gi|256829609|ref|YP_003158337.1| 30S riboosomal protein S6 [Desulfomicrobium baculatum DSM 4028]
gi|256578785|gb|ACU89921.1| ribosomal protein S6 [Desulfomicrobium baculatum DSM 4028]
Length = 105
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + LL ++ ++ ++ + + ++++ GG V V++ G++ AY +RK + Y
Sbjct: 2 MTRYEELILLSPELGVEECREIVNNFSAIVEREGGTVLKVDDWGVKDTAYPVRKFNRGRY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + P A+ E++R +RI + V + +T+
Sbjct: 62 VRMEMNMPGKAVAELERNVRITDGVFKFITV 92
>gi|152977673|ref|YP_001377190.1| 30S ribosomal protein S6 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189045454|sp|A7GVN7|RS6_BACCN RecName: Full=30S ribosomal protein S6
gi|152026425|gb|ABS24195.1| ribosomal protein S6 [Bacillus cytotoxicus NVH 391-98]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R ++ + K + ++ +++ NG E+ E G R +AY I R +Y
Sbjct: 1 MKKYEIMYIIRPNMEEEAQKALVERFANVLTNNGAEIINTKEWGKRRLAYEINDLRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S P A+ E R +I+E+++R + +
Sbjct: 61 MILNVNSNPEAVKEFDRLAKINEDIIRHIVV 91
>gi|218282112|ref|ZP_03488411.1| hypothetical protein EUBIFOR_00986 [Eubacterium biforme DSM 3989]
gi|218216905|gb|EEC90443.1| hypothetical protein EUBIFOR_00986 [Eubacterium biforme DSM 3989]
Length = 115
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + K + + I ENGG + V++ G++ AY I +K +Y
Sbjct: 19 MKKYEIMYIVNASLDDAAFKTVSDRLHATITENGGSIDKVDDWGVKEFAYEIDHMKKGHY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N+ + A + E +R RI NV+R + + +S
Sbjct: 79 VVINVTANNAGVFEFQRLSRISNNVIRIMVVKTES 113
>gi|295837783|ref|ZP_06824716.1| ribosomal protein S6 [Streptomyces sp. SPB74]
gi|302520487|ref|ZP_07272829.1| ribosomal protein S6 [Streptomyces sp. SPB78]
gi|318058996|ref|ZP_07977719.1| 30S ribosomal protein S6 [Streptomyces sp. SA3_actG]
gi|318075522|ref|ZP_07982854.1| 30S ribosomal protein S6 [Streptomyces sp. SA3_actF]
gi|333025746|ref|ZP_08453810.1| putative 30S ribosomal protein S6 [Streptomyces sp. Tu6071]
gi|197698941|gb|EDY45874.1| ribosomal protein S6 [Streptomyces sp. SPB74]
gi|302429382|gb|EFL01198.1| ribosomal protein S6 [Streptomyces sp. SPB78]
gi|332745598|gb|EGJ76039.1| putative 30S ribosomal protein S6 [Streptomyces sp. Tu6071]
Length = 96
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVAPLIESFLSVVREADGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA I E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVIKELDRQMNLNESVLRTKVLRPETH 96
>gi|153808731|ref|ZP_01961399.1| hypothetical protein BACCAC_03030 [Bacteroides caccae ATCC 43185]
gi|255691415|ref|ZP_05415090.1| ribosomal protein S6 [Bacteroides finegoldii DSM 17565]
gi|149128557|gb|EDM19775.1| hypothetical protein BACCAC_03030 [Bacteroides caccae ATCC 43185]
gi|260623061|gb|EEX45932.1| ribosomal protein S6 [Bacteroides finegoldii DSM 17565]
Length = 114
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I +++ R DE V+R LT +D +
Sbjct: 61 QLIEFNADPTVIDKLEVNFRRDERVIRFLTFKMDKY 96
>gi|225026120|ref|ZP_03715312.1| hypothetical protein EUBHAL_00361 [Eubacterium hallii DSM 3353]
gi|224956557|gb|EEG37766.1| hypothetical protein EUBHAL_00361 [Eubacterium hallii DSM 3353]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I D I + ++LI++ GGE+ V+E G + +AY I+K R+ YY
Sbjct: 1 MNKYELALVINAKIEDDARTDAIEKIKALIEKFGGEITNVDEWGKKKLAYEIQKMREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R++RI E V+R L + D+
Sbjct: 61 YFIQFDASAECPAEIERRVRIMEPVMRYLCVKQDA 95
>gi|224824685|ref|ZP_03697792.1| ribosomal protein S6 [Lutiella nitroferrum 2002]
gi|224603178|gb|EEG09354.1| ribosomal protein S6 [Lutiella nitroferrum 2002]
Length = 125
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTL 102
V MN+ + E++ + ++ VLR LT+ +D E SP +
Sbjct: 60 VLMNVECQAETLAEIEHAFKFNDAVLRHLTIKLDRAVTEASPMM 103
>gi|41406165|ref|NP_959001.1| 30S ribosomal protein S6 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118465214|ref|YP_879374.1| 30S ribosomal protein S6 [Mycobacterium avium 104]
gi|254773120|ref|ZP_05214636.1| 30S ribosomal protein S6 [Mycobacterium avium subsp. avium ATCC
25291]
gi|61215645|sp|Q744V6|RS6_MYCPA RecName: Full=30S ribosomal protein S6
gi|41394513|gb|AAS02384.1| RpsF [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166501|gb|ABK67398.1| ribosomal protein S6 [Mycobacterium avium 104]
Length = 96
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVEKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|282863345|ref|ZP_06272404.1| ribosomal protein S6 [Streptomyces sp. ACTE]
gi|282561680|gb|EFB67223.1| ribosomal protein S6 [Streptomyces sp. ACTE]
Length = 96
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|29347573|ref|NP_811076.1| 30S ribosomal protein S6 [Bacteroides thetaiotaomicron VPI-5482]
gi|253572033|ref|ZP_04849437.1| 30S ribosomal protein S6 [Bacteroides sp. 1_1_6]
gi|298383734|ref|ZP_06993295.1| ribosomal protein S6 [Bacteroides sp. 1_1_14]
gi|32171532|sp|Q8A5S5|RS6_BACTN RecName: Full=30S ribosomal protein S6
gi|29339474|gb|AAO77270.1| 30S ribosomal protein S6 [Bacteroides thetaiotaomicron VPI-5482]
gi|251838213|gb|EES66300.1| 30S ribosomal protein S6 [Bacteroides sp. 1_1_6]
gi|298263338|gb|EFI06201.1| ribosomal protein S6 [Bacteroides sp. 1_1_14]
Length = 114
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I +++ R DE V+R LT +D +
Sbjct: 61 QLVEFNADPTVIDKLELNFRRDERVIRFLTFKMDKY 96
>gi|297200912|ref|ZP_06918309.1| ribosomal protein S6 [Streptomyces sviceus ATCC 29083]
gi|197716410|gb|EDY60444.1| ribosomal protein S6 [Streptomyces sviceus ATCC 29083]
Length = 96
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|308175797|ref|YP_003922502.1| 30S ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens DSM 7]
gi|307608661|emb|CBI45032.1| ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens DSM 7]
gi|328555773|gb|AEB26265.1| 30S ribosomal protein S6 [Bacillus amyloliquefaciens TA208]
gi|328914162|gb|AEB65758.1| ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens LL3]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MKKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QILNVQSDAAAVSEFDRLAKISDDIIRHIVV 91
>gi|260174163|ref|ZP_05760575.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
gi|299147872|ref|ZP_07040935.1| ribosomal protein S6 [Bacteroides sp. 3_1_23]
gi|315922428|ref|ZP_07918668.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
gi|298514055|gb|EFI37941.1| ribosomal protein S6 [Bacteroides sp. 3_1_23]
gi|313696303|gb|EFS33138.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
Length = 114
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGVLQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I +++ R DE V+R LT +D +
Sbjct: 61 QLIEFNADPTVIDKLELNFRRDERVIRFLTFKMDKY 96
>gi|158520027|ref|YP_001527897.1| ribosomal protein S6 [Desulfococcus oleovorans Hxd3]
gi|226703453|sp|A8ZRQ3|RS6_DESOH RecName: Full=30S ribosomal protein S6
gi|158508853|gb|ABW65820.1| ribosomal protein S6 [Desulfococcus oleovorans Hxd3]
Length = 168
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ D+S + + +LI N G + +E G R +AY IRK + +Y
Sbjct: 1 MRRYETIFIADPDLSPENQAQLFEKATTLIDANSGVLVEFDEWGTRRLAYEIRKKPRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V ++ A + ++ RIDE VL+ +T+ +
Sbjct: 61 VRLDFCGDGATVQGLENAFRIDERVLKFMTVFL 93
>gi|123969448|ref|YP_001010306.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. AS9601]
gi|123199558|gb|ABM71199.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. AS9601]
Length = 174
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 29 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 88
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R +T+ + +P + + + + ND N D
Sbjct: 89 SHQGDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSNKSTSQSENND------NPD 142
Query: 124 RKQHVSEEKPLS 135
K E++P++
Sbjct: 143 AKVESKEKQPVA 154
>gi|256425942|ref|YP_003126595.1| ribosomal protein S6 [Chitinophaga pinensis DSM 2588]
gi|256040850|gb|ACU64394.1| ribosomal protein S6 [Chitinophaga pinensis DSM 2588]
Length = 116
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + +S + K ++ LI+ENGGEV N G+R++AY I+K Y+ +
Sbjct: 3 YELMVIFTPVLSEEDYKAAQKKFADLIKENGGEVTHENPWGLRSLAYPIQKKTTGMYLVL 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++P ++K ++ DENVLR +T +D +
Sbjct: 63 EYSAPSDLNEKLKIQLNRDENVLRHMTTALDKY 95
>gi|189462619|ref|ZP_03011404.1| hypothetical protein BACCOP_03311 [Bacteroides coprocola DSM
17136]
gi|198276876|ref|ZP_03209407.1| hypothetical protein BACPLE_03081 [Bacteroides plebeius DSM
17135]
gi|189430780|gb|EDU99764.1| hypothetical protein BACCOP_03311 [Bacteroides coprocola DSM
17136]
gi|198270401|gb|EDY94671.1| hypothetical protein BACPLE_03081 [Bacteroides plebeius DSM
17135]
Length = 115
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++++++ + G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKAILTQEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P+ I +++ R DE V+R LT +D +
Sbjct: 59 FYQLIEFKAEPSVIEKLEVNYRRDERVIRFLTFKMDKY 96
>gi|167627910|ref|YP_001678410.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189045469|sp|B0U079|RS6_FRAP2 RecName: Full=30S ribosomal protein S6
gi|167597911|gb|ABZ87909.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 111
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S+Q+ + +Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSEQLDAMLSKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V N+ ++ +++ ++ ++ VLR L + P++ ++ ++++
Sbjct: 60 VLFNVECDVESLEKLQENLKYNDAVLRRLVISKKEAVTEPSIMMETNEKE 109
>gi|300857398|ref|YP_003782382.1| 30S ribosomal protein S6 [Clostridium ljungdahlii DSM 13528]
gi|300437513|gb|ADK17280.1| 30S ribosomal protein S6 [Clostridium ljungdahlii DSM 13528]
Length = 95
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L+ + + K I +++ +I+ GG + V+ G R +AY I K + YY
Sbjct: 1 MSKYETIFILQPSLDEEACKANIEKFKGVIENGGGVIENVDVWGKRKLAYEINKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E+ R RI + V+R + +
Sbjct: 61 TLINFNADPKLPKELDRVFRITDTVIRHIIV 91
>gi|34499095|ref|NP_903310.1| 30S ribosomal protein S6 [Chromobacterium violaceum ATCC 12472]
gi|61215686|sp|Q7NRY7|RS6_CHRVO RecName: Full=30S ribosomal protein S6
gi|34104946|gb|AAQ61302.1| 30S ribosomal protein S6 [Chromobacterium violaceum ATCC 12472]
Length = 124
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN+ + E++ + ++ VLR LT+ +D
Sbjct: 60 VLMNVECQAETLAEIEHAFKFNDAVLRHLTIKMD 93
>gi|94971563|ref|YP_593611.1| 30S ribosomal protein S6 [Candidatus Koribacter versatilis
Ellin345]
gi|166226790|sp|Q1IHW3|RS6_ACIBL RecName: Full=30S ribosomal protein S6
gi|94553613|gb|ABF43537.1| SSU ribosomal protein S6P [Candidatus Koribacter versatilis
Ellin345]
Length = 147
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 54/95 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F++R D++ + + + ++ + GG ++ V+++G R +AY + Y+
Sbjct: 5 YEVMFIVRPDLTDEDLDKLVSTLETQVGTAGGTIKSVDKMGKRRLAYEVSTFTDGMYILF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
I A I E++R++R+ E V++ +T+ VD ++
Sbjct: 65 TIEGEGALIKEVERRLRVQEQVIKFITVRVDEEQK 99
>gi|206890158|ref|YP_002248634.1| ribosomal protein S6 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742096|gb|ACI21153.1| ribosomal protein S6 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 120
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V LL ++ +++++ + + SLI ENGGE+ V+ G + +AY++ + YYV
Sbjct: 4 FYEKVVLLLPTLTEEEVQEAVKKISSLIVENGGEILKVDNWGKKKLAYKLNRQTMGYYVL 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+P +I +M+ ++ + V + + + H+
Sbjct: 64 FLFKAPALSIKKMEEFYKVYDPVFKFMVFKLTKHQ 98
>gi|320109097|ref|YP_004184687.1| 30S ribosomal protein S6 [Terriglobus saanensis SP1PR4]
gi|319927618|gb|ADV84693.1| ribosomal protein S6 [Terriglobus saanensis SP1PR4]
Length = 166
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 53/93 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R DI + + + +++ GGEV ++G R +AY +RK + ++
Sbjct: 3 RTYEVMYIVRPDIDEASLDALVEGFNAVVTNGGGEVTTAEKMGRRRLAYTVRKFQDGQFI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ I + + E++R++R+ E V++ +T+ D
Sbjct: 63 LLTITADGKVVLELERRLRVTEQVIKFITVRTD 95
>gi|209527733|ref|ZP_03276229.1| ribosomal protein S6 [Arthrospira maxima CS-328]
gi|209491854|gb|EDZ92213.1| ribosomal protein S6 [Arthrospira maxima CS-328]
Length = 116
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +++LR D++ +Q++ +YQ +++E+G + V LG R +AY I K R+ Y+
Sbjct: 5 IYETMYILRSDLNEEQLEAARAKYQDILREHGAQNLEVQNLGKRRLAYDIDKYREGIYIQ 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
MN + I M+R MRI +V+R LT+
Sbjct: 65 MNYEGGDSDQIKVMERAMRIGGDVIRYLTI 94
>gi|71891874|ref|YP_277603.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|91207902|sp|Q493V5|RS6_BLOPB RecName: Full=30S ribosomal protein S6
gi|71795980|gb|AAZ40731.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 117
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D+S +QI I +Y +++ G+V + G R +AY + K KAYY
Sbjct: 1 MRYYEIVFMVHPDLS-EQISSIINRYTTIVTNAQGKVHRIENWGRRQLAYPVNKLCKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +NI + E+ ++N++RS+ +
Sbjct: 60 VLLNIEVSQDTVKELNDDFHFNKNIIRSMIV 90
>gi|205371928|ref|ZP_03224748.1| 30S ribosomal protein S6 [Bacillus coahuilensis m4-4]
Length = 97
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +I NGGE+ E G R +AY I R +Y
Sbjct: 1 MRKYEVMYIVRPNIEDEAKKALVERFSGIITTNGGEIIESKEWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN+ AS A+ E R +I ++++R + + VD
Sbjct: 61 YIMNVQASNTDAVSEFDRLAKISDDIIRHIAVRVD 95
>gi|86142230|ref|ZP_01060740.1| 30S ribosomal protein S6 [Leeuwenhoekiella blandensis MED217]
gi|85830982|gb|EAQ49439.1| 30S ribosomal protein S6 [Leeuwenhoekiella blandensis MED217]
Length = 112
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + NG ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQVKETVKKFEDFLVSNGAKMISKEDWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P I + + R DE V+R LT+ +D +
Sbjct: 61 HLFEFTVPGEVIANFELEFRRDERVMRFLTVKLDKY 96
>gi|224026731|ref|ZP_03645097.1| hypothetical protein BACCOPRO_03488 [Bacteroides coprophilus DSM
18228]
gi|224019967|gb|EEF77965.1| hypothetical protein BACCOPRO_03488 [Bacteroides coprophilus DSM
18228]
Length = 115
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++++++ + G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDAQMKEAVDKFKAILTQEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+Y + + P+ I +++ R DE V+R LT +D
Sbjct: 59 FYQLIEFKAEPSVIEKLEINYRRDERVIRFLTFKMD 94
>gi|89890854|ref|ZP_01202363.1| 30S ribosomal protein S6 [Flavobacteria bacterium BBFL7]
gi|89516999|gb|EAS19657.1| 30S ribosomal protein S6 [Flavobacteria bacterium BBFL7]
Length = 114
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++ + G ++ + G++ +AY I + +Y
Sbjct: 1 MNQYETVFILNPVLSDDQVKEAVKKFENFLTTRGAKMVAKEDWGLKKLAYTIENKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
P I++ + + R DE V+R LT+ +D + + +R DR
Sbjct: 61 TLFQFEVPGEVINDFEVEFRRDERVMRYLTVKLDKY--AIEWAAKRRDR 107
>gi|258655466|ref|YP_003204622.1| 30S ribosomal protein S6 [Nakamurella multipartita DSM 44233]
gi|258558691|gb|ACV81633.1| ribosomal protein S6 [Nakamurella multipartita DSM 44233]
Length = 102
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L ++ + + +I + ++I++ GG V V+ G R +A+ I+KN + Y +
Sbjct: 10 YELLLILDPNLDERTVAPSIDTFLNVIRQGGGSVENVDIWGKRRLAFEIKKNPEGIYAVI 69
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
+ P A + E+ R++ ++E+VLR+
Sbjct: 70 KVTCPSAVVTELDRQLNLNESVLRT 94
>gi|154688195|ref|YP_001423356.1| 30S ribosomal protein S6 [Bacillus amyloliquefaciens FZB42]
gi|166226800|sp|A7ZAU9|RS6_BACA2 RecName: Full=30S ribosomal protein S6
gi|154354046|gb|ABS76125.1| RpsF [Bacillus amyloliquefaciens FZB42]
Length = 95
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MKKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QILNVQSEAAAVAEFDRLAKISDDIIRHIVV 91
>gi|160885185|ref|ZP_02066188.1| hypothetical protein BACOVA_03183 [Bacteroides ovatus ATCC 8483]
gi|237714854|ref|ZP_04545335.1| 30S ribosomal protein S6 [Bacteroides sp. D1]
gi|237719992|ref|ZP_04550473.1| 30S ribosomal protein S6 [Bacteroides sp. 2_2_4]
gi|262406875|ref|ZP_06083424.1| ribosomal protein S6 [Bacteroides sp. 2_1_22]
gi|293368835|ref|ZP_06615439.1| ribosomal protein S6 [Bacteroides ovatus SD CMC 3f]
gi|294647157|ref|ZP_06724756.1| ribosomal protein S6 [Bacteroides ovatus SD CC 2a]
gi|294809232|ref|ZP_06767948.1| ribosomal protein S6 [Bacteroides xylanisolvens SD CC 1b]
gi|298483613|ref|ZP_07001788.1| ribosomal protein S6 [Bacteroides sp. D22]
gi|156109535|gb|EDO11280.1| hypothetical protein BACOVA_03183 [Bacteroides ovatus ATCC 8483]
gi|229445179|gb|EEO50970.1| 30S ribosomal protein S6 [Bacteroides sp. D1]
gi|229450544|gb|EEO56335.1| 30S ribosomal protein S6 [Bacteroides sp. 2_2_4]
gi|262355578|gb|EEZ04669.1| ribosomal protein S6 [Bacteroides sp. 2_1_22]
gi|292636140|gb|EFF54628.1| ribosomal protein S6 [Bacteroides ovatus SD CMC 3f]
gi|292637444|gb|EFF55863.1| ribosomal protein S6 [Bacteroides ovatus SD CC 2a]
gi|294443626|gb|EFG12377.1| ribosomal protein S6 [Bacteroides xylanisolvens SD CC 1b]
gi|295084749|emb|CBK66272.1| SSU ribosomal protein S6P [Bacteroides xylanisolvens XB1A]
gi|298270183|gb|EFI11769.1| ribosomal protein S6 [Bacteroides sp. D22]
Length = 114
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGVLQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I +++ R DE V+R LT +D +
Sbjct: 61 QLIEFNADPTVIDKLEINFRRDERVIRFLTFKMDKY 96
>gi|154491709|ref|ZP_02031335.1| hypothetical protein PARMER_01320 [Parabacteroides merdae ATCC
43184]
gi|154087950|gb|EDN86995.1| hypothetical protein PARMER_01320 [Parabacteroides merdae ATCC
43184]
Length = 117
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++ +L++E G E+ VNE G+R +AY I K
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKEQGAEI--VNEENWGLRKLAYPIDKKTTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I ++ R DE V+R LT D +
Sbjct: 59 FYQLVEFKANPETIATLEINFRRDERVIRFLTFRQDKY 96
>gi|326799757|ref|YP_004317576.1| 30S ribosomal protein S6 [Sphingobacterium sp. 21]
gi|326550521|gb|ADZ78906.1| 30S ribosomal protein S6 [Sphingobacterium sp. 21]
Length = 122
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S + K+ I ++++++ ENG E+ + G++ +AY I K +Y
Sbjct: 1 MQQYETVVILTPLLSEEVAKEVIAKFKNILTENGAEIIHEDNWGLKKLAYPIEKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I +++ + + DE V+R LT+ +D H
Sbjct: 61 HLTEFKAPGELISKLELEYKRDERVMRFLTISLDKH 96
>gi|153845041|ref|ZP_01993725.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus AQ3810]
gi|149745158|gb|EDM56409.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus AQ3810]
Length = 128
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+YV MN+
Sbjct: 6 VFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVE 64
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
+ A I E++ R ++ VLR++ +
Sbjct: 65 ADQAVIDELETAFRFNDAVLRNMIM 89
>gi|332883574|gb|EGK03857.1| 30S ribosomal protein S6 [Dysgonomonas mossii DSM 22836]
Length = 118
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++L+ G ++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFILTPVLSDVQMKEAVEKFKTLLVNEGAKIVSEENWGLRKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQS 99
+ + P+ I +++ R DE V+R LT D SHE +
Sbjct: 61 AMLEFEADPSVIAKLEINFRRDERVIRFLTFRQDKFSHEYA 101
>gi|57167954|ref|ZP_00367093.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|305431896|ref|ZP_07401063.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
gi|57020328|gb|EAL56997.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|304444980|gb|EFM37626.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
Length = 125
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLVKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERILRITEEVIRFLIV 91
>gi|331700357|ref|YP_004336596.1| 30S ribosomal protein S6 [Pseudonocardia dioxanivorans CB1190]
gi|326955046|gb|AEA28743.1| 30S ribosomal protein S6 [Pseudonocardia dioxanivorans CB1190]
Length = 109
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ + ++++ +GG V V G R +AY I KN +A Y
Sbjct: 4 MRHYEVMVILDPSLDERTVQPSLETFLNVVRTDGGSVEKVEVWGKRRLAYEIAKNAEAIY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + PA + E+ R++ ++E+VLR+ L
Sbjct: 64 AILEVTAEPATVAELDRQLGLNESVLRTKVL 94
>gi|325298155|ref|YP_004258072.1| 30S ribosomal protein S6 [Bacteroides salanitronis DSM 18170]
gi|324317708|gb|ADY35599.1| 30S ribosomal protein S6 [Bacteroides salanitronis DSM 18170]
Length = 115
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++++++ + G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKTILTQEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P+ I +++ R DE V+R LT +D +
Sbjct: 59 FYQLLEFKADPSVISKLEINYRRDERVIRFLTFRMDKY 96
>gi|264677149|ref|YP_003277055.1| ribosomal protein S6 [Comamonas testosteroni CNB-2]
gi|299530693|ref|ZP_07044108.1| 30S ribosomal protein S6 [Comamonas testosteroni S44]
gi|262207661|gb|ACY31759.1| ribosomal protein S6 [Comamonas testosteroni CNB-2]
gi|298721209|gb|EFI62151.1| 30S ribosomal protein S6 [Comamonas testosteroni S44]
Length = 120
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E + + ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETAASAMMKSVEREE 110
>gi|302543991|ref|ZP_07296333.1| ribosomal protein S6 [Streptomyces hygroscopicus ATCC 53653]
gi|302461609|gb|EFL24702.1| ribosomal protein S6 [Streptomyces himastatinicus ATCC 53653]
Length = 96
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+I+E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVIREGNGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|307329991|ref|ZP_07609143.1| ribosomal protein S6 [Streptomyces violaceusniger Tu 4113]
gi|306884367|gb|EFN15401.1| ribosomal protein S6 [Streptomyces violaceusniger Tu 4113]
Length = 96
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGEGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|88596295|ref|ZP_01099532.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283954633|ref|ZP_06372151.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|88191136|gb|EAQ95108.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283793825|gb|EFC32576.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|315927922|gb|EFV07244.1| Ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 125
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLIKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|254818593|ref|ZP_05223594.1| 30S ribosomal protein S6 [Mycobacterium intracellulare ATCC
13950]
Length = 96
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVVDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|319651083|ref|ZP_08005217.1| ribosomal protein S6 [Bacillus sp. 2_A_57_CT2]
gi|317397253|gb|EFV77957.1| ribosomal protein S6 [Bacillus sp. 2_A_57_CT2]
Length = 95
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +++ +NG EV + G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPNIEDEAKKALVERFNTILTDNGAEVSESKDWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN+ + A+ E R +I E+++R + +
Sbjct: 61 QLMNVNAEAKAVDEFTRLAKISEDIIRYIVV 91
>gi|332830346|gb|EGK02974.1| 30S ribosomal protein S6 [Dysgonomonas gadei ATCC BAA-286]
Length = 118
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++++++ G ++VNE G+R +AY I+K
Sbjct: 1 MNNYETVFILTPVLSDVQMKEAVEKFKTILTNEGA--KIVNEENWGLRKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+Y + + PA I +++ R DE V+R LT
Sbjct: 59 FYAMLEFEADPAVIAKLEINFRRDERVIRFLTF 91
>gi|311281254|ref|YP_003943485.1| ribosomal protein S6 [Enterobacter cloacae SCF1]
gi|308750449|gb|ADO50201.1| ribosomal protein S6 [Enterobacter cloacae SCF1]
Length = 131
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ + I E++ R ++ V+RS+ + E SP + + +R +R D F
Sbjct: 60 VLLNVEASQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFAN 118
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 119 ETADDADAGDSEE 131
>gi|269129132|ref|YP_003302502.1| 30S ribosomal protein S6 [Thermomonospora curvata DSM 43183]
gi|268314090|gb|ACZ00465.1| ribosomal protein S6 [Thermomonospora curvata DSM 43183]
Length = 96
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + ++ Q+ S+++ GG V V+ G R +AY I+K + Y
Sbjct: 1 MRRYEVMVILDPSIEERAVAPSLDQFLSVVKNGGGTVEKVDIWGRRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ + E+VLR+ + + H
Sbjct: 61 AVVDLTAEPAVVKELDRQLNLSESVLRTKVIRPEVH 96
>gi|296141834|ref|YP_003649077.1| ribosomal protein S6 [Tsukamurella paurometabola DSM 20162]
gi|296029968|gb|ADG80738.1| ribosomal protein S6 [Tsukamurella paurometabola DSM 20162]
Length = 94
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V ++ G R +AY I KN + Y
Sbjct: 1 MRKYELMVILDPSLDERTVAPSLETFLNVVRKDGGTVSNIDIWGKRRLAYEITKNSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + PA ++E+ R+++++E+VLR+ L
Sbjct: 61 AVIDLTAEPATVNELDRQLKLNESVLRTKVL 91
>gi|260912754|ref|ZP_05919240.1| 30S ribosomal protein S6 [Pasteurella dagmatis ATCC 43325]
gi|260633132|gb|EEX51297.1| 30S ribosomal protein S6 [Pasteurella dagmatis ATCC 43325]
Length = 117
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y I+E GG++ + + G R +AY I K KA+YV MN+ +P I E+
Sbjct: 7 SEQVPGMIERYTGSIKEAGGQIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDEL 66
Query: 76 KRKMRIDENVLRSLTL 91
+ R ++ VLR++ +
Sbjct: 67 ETTFRYNDAVLRNVII 82
>gi|229087961|ref|ZP_04220069.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-44]
gi|228695346|gb|EEL48223.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-44]
Length = 96
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MKKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIVV 91
>gi|121535341|ref|ZP_01667153.1| ribosomal protein S6 [Thermosinus carboxydivorans Nor1]
gi|121306033|gb|EAX46963.1| ribosomal protein S6 [Thermosinus carboxydivorans Nor1]
Length = 94
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + + I ++++LI+ NGG V ++ G R +AY ++ + YY
Sbjct: 1 MRKYEVIFIVKP-LDEEATNAVIAKFENLIKNNGGNVEKIDRWGKRRLAYPVKDFTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + P A+ E++R M+I + +LR + +
Sbjct: 60 CVIYFDAEPKAVFELERVMKITDEILRHMVV 90
>gi|118138636|pdb|2J5A|A Chain A, Folding Of S6 Structures With Divergent Amino-Acid
Composition: Pathway Flexibility Within Partly
Overlapping Foldons
Length = 110
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE VF ++ +S +++K Q + I++ GGE+ + GMR +AY I+K A Y
Sbjct: 7 LRYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARY 66
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ + P +E+ +++IDE+V+R L + + E
Sbjct: 67 FLVQFKTENPQLPNELDFQLKIDEDVIRWLNIQIKESE 104
>gi|317479667|ref|ZP_07938791.1| ribosomal protein S6 [Bacteroides sp. 4_1_36]
gi|316904168|gb|EFV25998.1| ribosomal protein S6 [Bacteroides sp. 4_1_36]
Length = 114
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++S++ G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKSILTAEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT D +
Sbjct: 59 FYQLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKY 96
>gi|296134462|ref|YP_003641709.1| ribosomal protein S6 [Thermincola sp. JR]
gi|296033040|gb|ADG83808.1| ribosomal protein S6 [Thermincola potens JR]
Length = 95
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ +Q + ++Q ++ GGE+ +++ G R +AY I R+ +Y
Sbjct: 1 MRAYEAMYIINPELDEEQSNAIVEKFQGIVTGTGGELVKLDKWGKRKLAYEIDHKREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M PA E+ R RI + +++ + +
Sbjct: 61 VLMQFNGEPATAQELDRVFRITDGIMKYMIV 91
>gi|238918384|ref|YP_002931898.1| 30S ribosomal protein S6 [Edwardsiella ictaluri 93-146]
gi|259495333|sp|C5BF77|RS6_EDWI9 RecName: Full=30S ribosomal protein S6
gi|238867952|gb|ACR67663.1| ribosomal protein S6, putative [Edwardsiella ictaluri 93-146]
Length = 131
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYSINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ + I E++ R ++ V+RS+ + E SP + + R+ R D
Sbjct: 60 VLMNVEASQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRED 115
>gi|255035776|ref|YP_003086397.1| 30S ribosomal protein S6 [Dyadobacter fermentans DSM 18053]
gi|254948532|gb|ACT93232.1| ribosomal protein S6 [Dyadobacter fermentans DSM 18053]
Length = 126
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAYY 60
K YE VF+L +S Q KD + ++ ++I NG ++ G+R +AY I +KN Y+
Sbjct: 3 KQYETVFILTPILSEAQAKDAVEKFTTIITSNGAQIVHEENWGLRKLAYPIQKKNSGFYH 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V A+ + ++ + R DE VLR +T+ +D H
Sbjct: 63 VVEYTANEGNVVDVLETEFRRDERVLRFMTIALDKH 98
>gi|125537038|gb|EAY83526.1| hypothetical protein OsI_38738 [Oryza sativa Indica Group]
Length = 317
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D ++++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHED-RVEEVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE ++R L +
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVM 218
>gi|108802329|ref|YP_642526.1| 30S ribosomal protein S6 [Mycobacterium sp. MCS]
gi|119871482|ref|YP_941434.1| 30S ribosomal protein S6 [Mycobacterium sp. KMS]
gi|126438309|ref|YP_001074000.1| 30S ribosomal protein S6 [Mycobacterium sp. JLS]
gi|108772748|gb|ABG11470.1| SSU ribosomal protein S6P [Mycobacterium sp. MCS]
gi|119697571|gb|ABL94644.1| SSU ribosomal protein S6P [Mycobacterium sp. KMS]
gi|126238109|gb|ABO01510.1| SSU ribosomal protein S6P [Mycobacterium sp. JLS]
Length = 96
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 AVIDVKAAPATVTELDRQLSLNESVLRTKVMRTDKH 96
>gi|15605659|ref|NP_213034.1| ribosomal protein S06 [Aquifex aeolicus VF5]
gi|7388213|sp|O66474|RS6_AQUAE RecName: Full=30S ribosomal protein S6
gi|2982820|gb|AAC06443.1| ribosomal protein S06 [Aquifex aeolicus VF5]
Length = 110
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE VF ++ +S +++K Q + I++ GGE+ + GMR +AY I+K A Y
Sbjct: 7 LRYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARY 66
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ + P +E+ +++IDE+V+R L + E
Sbjct: 67 FLVQFKTENPQLPNELDFQLKIDEDVIRWLNFQIKESE 104
>gi|197119137|ref|YP_002139564.1| 30S ribosomal protein S6 [Geobacter bemidjiensis Bem]
gi|226703471|sp|B5EHW9|RS6_GEOBB RecName: Full=30S ribosomal protein S6
gi|197088497|gb|ACH39768.1| ribosomal protein S6 [Geobacter bemidjiensis Bem]
Length = 134
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 57/100 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q +I G+ + V + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVIASMNGDFKRVEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
++ I E++R++R+D+ V+R ++ +++ +P
Sbjct: 63 YLRFDGDSGLIAELERRLRLDDKVIRYQSVKLETEVVAPA 102
>gi|190575041|ref|YP_001972886.1| 30S ribosomal protein S6 [Stenotrophomonas maltophilia K279a]
gi|190012963|emb|CAQ46595.1| 30s ribosomal protein S6 [Stenotrophomonas maltophilia K279a]
Length = 136
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV MNI + A ++E+
Sbjct: 7 SEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLMNIEADQAVLNEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 67 TESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDK 104
>gi|52841822|ref|YP_095621.1| 30S ribosomal protein S6 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294364|ref|YP_126779.1| 30S ribosomal protein S6 [Legionella pneumophila str. Lens]
gi|54297505|ref|YP_123874.1| 30S ribosomal protein S6 [Legionella pneumophila str. Paris]
gi|148359129|ref|YP_001250336.1| 30S ribosomal protein S6 [Legionella pneumophila str. Corby]
gi|296107177|ref|YP_003618877.1| rpsF 30S ribosomal protein S6 [Legionella pneumophila 2300/99
Alcoy]
gi|61215400|sp|Q5WWM0|RS6_LEGPL RecName: Full=30S ribosomal protein S6
gi|61215408|sp|Q5X4X0|RS6_LEGPA RecName: Full=30S ribosomal protein S6
gi|61215428|sp|Q5ZV48|RS6_LEGPH RecName: Full=30S ribosomal protein S6
gi|166226977|sp|A5IC90|RS6_LEGPC RecName: Full=30S ribosomal protein S6
gi|52628933|gb|AAU27674.1| 30S ribosomal protein S6 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751290|emb|CAH12701.1| 30S ribosomal protein S6 [Legionella pneumophila str. Paris]
gi|53754196|emb|CAH15673.1| 30S ribosomal protein S6 [Legionella pneumophila str. Lens]
gi|148280902|gb|ABQ54990.1| 30S ribosomal protein S6 [Legionella pneumophila str. Corby]
gi|295649078|gb|ADG24925.1| rpsF 30S ribosomal protein S6 [Legionella pneumophila 2300/99
Alcoy]
gi|307610292|emb|CBW99856.1| 30S ribosomal protein S6 [Legionella pneumophila 130b]
Length = 112
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y+ +I ++ G++ +LG R +AY I K KA+Y
Sbjct: 1 MRHYEIMFLVHPD-QSEQVPGMVERYEGIITKHNGKIHRKEDLGRRQLAYSINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+ MN+ A++E+K + ++ +LR L
Sbjct: 60 ILMNVECNLDALNEIKNAFKFNDAILRHL 88
>gi|296167066|ref|ZP_06849478.1| 30S ribosomal protein S6 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897623|gb|EFG77217.1| 30S ribosomal protein S6 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 108
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 13 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 73 VVVDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 108
>gi|108862831|gb|ABA98957.2| ribosomal protein S6 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 317
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D ++++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHED-RVEEVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE ++R L +
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVM 218
>gi|134103771|ref|YP_001109432.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
gi|166227379|sp|A4FR32|RS6_SACEN RecName: Full=30S ribosomal protein S6
gi|133916394|emb|CAM06507.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
Length = 118
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLENFLNVIRNDGGSVEKVDVWGRRRLAYEIDKQAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +++ S PA++ E+ R++ ++E VLR+ L
Sbjct: 61 VVLDLNSEPASVKELDRQLNLNETVLRTKVL 91
>gi|297158764|gb|ADI08476.1| 30S ribosomal protein S6 [Streptomyces bingchenggensis BCW-1]
Length = 96
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|257093838|ref|YP_003167479.1| 30S ribosomal protein S6 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046362|gb|ACV35550.1| ribosomal protein S6 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 128
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ I +Y++LI G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLIVHPD-QSEQVPAMIDRYKTLIASRAGQIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +NI + E++ + ++ +LR LT+
Sbjct: 60 VLLNIECDNTTLAELEHGFKFNDAILRHLTI 90
>gi|123967130|ref|YP_001012211.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9515]
gi|166227365|sp|A2BZ93|RS6_PROM5 RecName: Full=30S ribosomal protein S6
gi|123201496|gb|ABM73104.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9515]
Length = 155
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 55/88 (62%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ +++K+ I +Y L++E G + G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEEEVKNHIDKYNKLLEEFGATILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++++ MR+ E+V+R LT+
Sbjct: 67 SHQGDGQHIFKIEKAMRLSEDVIRYLTV 94
>gi|159040549|ref|YP_001539802.1| 30S ribosomal protein S6 [Salinispora arenicola CNS-205]
gi|189045490|sp|A8LXG3|RS6_SALAI RecName: Full=30S ribosomal protein S6
gi|157919384|gb|ABW00812.1| ribosomal protein S6 [Salinispora arenicola CNS-205]
Length = 96
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 53/88 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDSSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + PAA+ E++R++R++E+VLR+
Sbjct: 61 AVIDLQATPAAVAELERQLRLNESVLRT 88
>gi|326336348|ref|ZP_08202519.1| 30S ribosomal protein S6 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691522|gb|EGD33490.1| 30S ribosomal protein S6 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 113
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEAQIKEAVEKFENFLTSKGAEMVAKEDWGLKKLAYSIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+P I + + R DE V+R LT+ +D
Sbjct: 61 HLFEFKAPGDIIESFEVEFRRDERVMRYLTVKLD 94
>gi|315605478|ref|ZP_07880516.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312824|gb|EFU60903.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 96
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + T+ +Y + + GG V V+ G R +AY I K + Y
Sbjct: 1 MRNYELMVILDPSIDERTVAPTMEKYLAPVGAAGGSVENVDIWGKRRLAYDILKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + P E+ R+M IDE +LR+ L D+H
Sbjct: 61 VVIDMTTTPEVALEINRRMGIDETILRTKLLRPDAH 96
>gi|295425408|ref|ZP_06818106.1| 30S ribosomal protein S6 [Lactobacillus amylolyticus DSM 11664]
gi|295064910|gb|EFG55820.1| 30S ribosomal protein S6 [Lactobacillus amylolyticus DSM 11664]
Length = 98
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+S + K + +Y I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVSEEDKKAVVDKYDKAIADNGGTMVESKDWGKRHFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFGRLSKIDNAILRSMTVKLD 97
>gi|120406964|ref|YP_956793.1| 30S ribosomal protein S6 [Mycobacterium vanbaalenii PYR-1]
gi|119959782|gb|ABM16787.1| SSU ribosomal protein S6P [Mycobacterium vanbaalenii PYR-1]
Length = 96
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 AIVDVKAEPATVSELDRQLNLNESVLRTKVMRTDKH 96
>gi|168183706|ref|ZP_02618370.1| 30S ribosomal protein S6 [Clostridium botulinum Bf]
gi|237797085|ref|YP_002864637.1| 30S ribosomal protein S6 [Clostridium botulinum Ba4 str. 657]
gi|259495327|sp|C3KWI0|RS6_CLOB6 RecName: Full=30S ribosomal protein S6
gi|182673234|gb|EDT85195.1| 30S ribosomal protein S6 [Clostridium botulinum Bf]
gi|229262336|gb|ACQ53369.1| 30S ribosomal protein S6 [Clostridium botulinum Ba4 str. 657]
Length = 94
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++S+I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKSVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + E+ R RI + V+R + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMII 91
>gi|313159261|gb|EFR58630.1| ribosomal protein S6 [Alistipes sp. HGB5]
Length = 114
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+++ ++Q +I ENGG++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVQEVADKFQGVITENGGQIVNKESWGLRKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I+ ++ + R DE ++R LT
Sbjct: 61 FLVEFTGEGMLINTLETQYRRDERIIRFLTF 91
>gi|317123156|ref|YP_004103159.1| 30S ribosomal protein S6P [Thermaerobacter marianensis DSM 12885]
gi|315593136|gb|ADU52432.1| SSU ribosomal protein S6P [Thermaerobacter marianensis DSM 12885]
Length = 97
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ R D+ + K + + Q ++ + GG V V+ G R +AY I R+ +Y
Sbjct: 1 MRAYELMYITRPDLDEEAEKALLDRLQKIVVDGGGSVEQVDVWGRRRLAYEIAGYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ P HE++R +R+ ++++R + +L
Sbjct: 61 TVVQFQGPAGVTHELERVIRLSDDIIRHIIVL 92
>gi|78356457|ref|YP_387906.1| 30S ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|91207914|sp|Q312D5|RS6_DESDG RecName: Full=30S ribosomal protein S6
gi|78218862|gb|ABB38211.1| SSU ribosomal protein S6P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++ SQ +D + +I+ G V V+ GMR +AY +RK+ + YY
Sbjct: 1 MRKFETLLLLSPELGSQPREDLLAVLTGVIEREQGSVLAVDHWGMRDLAYPVRKHMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQS 99
V + A ++ E++R +RI + + + +T+ L D E++
Sbjct: 61 VRLEYAVAGPSVAELERIIRITDGIYKFVTVKLADEAEEA 100
>gi|116750609|ref|YP_847296.1| 30S ribosomal protein S6 [Syntrophobacter fumaroxidans MPOB]
gi|166227396|sp|A0LN59|RS6_SYNFM RecName: Full=30S ribosomal protein S6
gi|116699673|gb|ABK18861.1| SSU ribosomal protein S6P [Syntrophobacter fumaroxidans MPOB]
Length = 147
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D+ + + +S++ NGG+V G + +AY ++K + Y
Sbjct: 1 MRKYETFFIIDPDLPDEVTAAVDEKIKSVVGANGGDVVSYVPWGKKKLAYPVKKRSRGLY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V M A + E++R MR+DE VL+ +T+ +D
Sbjct: 61 VLMEYAGDSRLVAELERNMRLDERVLKFITVKLD 94
>gi|284006635|emb|CBA71896.1| 30S ribosomal protein S6 [Arsenophonus nasoniae]
Length = 122
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y I E G++ + + G R +AY I K KA+YV MN+ +P I E+
Sbjct: 7 SEQVAGMIERYSGSITEAQGQIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
+ R ++ V+RS+ + V E SP + +DDR R
Sbjct: 67 ETNFRFNDAVVRSMIMRVKHAVTEASPMVKA----KDDRRSR 104
>gi|298530248|ref|ZP_07017650.1| ribosomal protein S6 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509622|gb|EFI33526.1| ribosomal protein S6 [Desulfonatronospira thiodismutans ASO3-1]
Length = 103
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 52/88 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + LL ++ S + ++ ++++NGG+V ++ G++T+AY ++K + Y+ M
Sbjct: 5 YETLLLLNPELGSDGSNALLEKFSGVLEKNGGQVIKNDDWGLKTLAYPVKKQTRGRYIRM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ P A + E +R +RI + V + LT+
Sbjct: 65 EYSLPAAQVSEFERNIRIADGVFKFLTV 92
>gi|78780184|ref|YP_398296.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9312]
gi|91207929|sp|Q317T5|RS6_PROM9 RecName: Full=30S ribosomal protein S6
gi|78713683|gb|ABB50860.1| SSU ribosomal protein S6P [Prochlorococcus marinus str. MIT 9312]
Length = 152
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++++ MRI E+V+R +T+
Sbjct: 67 SHQGDGQHIFKIEKAMRISEDVIRYMTV 94
>gi|222617304|gb|EEE53436.1| hypothetical protein OsJ_36520 [Oryza sativa Japonica Group]
Length = 257
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D ++++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHED-RVEEVEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE ++R L +
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVM 218
>gi|291007702|ref|ZP_06565675.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
Length = 121
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+ +GG V V+ G R +AY I K + Y
Sbjct: 4 MRHYELMVILDPSLDERTVAPSLENFLNVIRNDGGSVEKVDVWGRRRLAYEIDKQAEGIY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +++ S PA++ E+ R++ ++E VLR+ L
Sbjct: 64 VVLDLNSEPASVKELDRQLNLNETVLRTKVL 94
>gi|283768495|ref|ZP_06341407.1| ribosomal protein S6 [Bulleidia extructa W1219]
gi|283104887|gb|EFC06259.1| ribosomal protein S6 [Bulleidia extructa W1219]
Length = 101
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++++ + +++ + + Q + NG + +E GMR AY I +K YY
Sbjct: 1 MRKYEVMYIIKESVETEKRGELMNQIAGFLTNNGAVITKTDEWGMRDFAYEIDDMKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V + + AA+ E R M I+ NV+R +
Sbjct: 61 VVLKFEADNAAVKEFDRLMSINVNVVRFM 89
>gi|218264330|ref|ZP_03478187.1| hypothetical protein PRABACTJOHN_03878 [Parabacteroides johnsonii
DSM 18315]
gi|218222098|gb|EEC94748.1| hypothetical protein PRABACTJOHN_03878 [Parabacteroides johnsonii
DSM 18315]
Length = 117
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++ ++++E G E+ VNE G+R +AY I K
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNILKEQGAEI--VNEENWGLRKLAYPIDKKTTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I ++ R DE V+R LT D +
Sbjct: 59 FYQLVEFKANPETIATLEVNFRRDERVIRFLTFRQDKY 96
>gi|323342370|ref|ZP_08082602.1| 30S ribosomal protein S6 [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463482|gb|EFY08676.1| 30S ribosomal protein S6 [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 96
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ + + I + +++ +NG + VNE G+R +AY I +K YY
Sbjct: 1 MRKYEVMYIVKPTLDEEARTAVIAKLHAILTDNGATIDEVNEWGLRELAYEIEDFKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V S A++E R RI+ +V+R + +
Sbjct: 61 VVTQFTSGDEAVNEFNRLTRINNDVIRHMIV 91
>gi|225850829|ref|YP_002731063.1| ribosomal protein S6 [Persephonella marina EX-H1]
gi|225646735|gb|ACO04921.1| ribosomal protein S6 [Persephonella marina EX-H1]
Length = 115
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ ++ ++I + QSLI NGGE+ + G + +AY I+ YY
Sbjct: 1 MRYYELVFVLKPTLTEEEISSKVESVQSLITSNGGEIYNFEKWGRKELAYPIQNFNSGYY 60
Query: 61 VFMNIASPPAAI-HEMKRKMRIDENVLRSLTL 91
+N + + +++ +R+DE+V+R L
Sbjct: 61 FIINFKTENYELPSKLEYNLRLDEDVIRFLAF 92
>gi|269137724|ref|YP_003294424.1| 30S ribosomal protein S6 [Edwardsiella tarda EIB202]
gi|267983384|gb|ACY83213.1| 30S ribosomal protein S6 [Edwardsiella tarda EIB202]
gi|304557780|gb|ADM40444.1| SSU ribosomal protein S6p [Edwardsiella tarda FL6-60]
Length = 131
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MN+ + I E++ R ++ V+RS+ + E SP + + R+ R D
Sbjct: 60 VLMNVEASQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRED 115
>gi|83644549|ref|YP_432984.1| 30S ribosomal protein S6 [Hahella chejuensis KCTC 2396]
gi|123534100|sp|Q2SLB5|RS6_HAHCH RecName: Full=30S ribosomal protein S6
gi|83632592|gb|ABC28559.1| ribosomal protein S6 [Hahella chejuensis KCTC 2396]
Length = 142
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ + +Y S + GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVIMVHPD-QSEQVPAMVERYTSSVNAGGGKVHRLEDWGRRHMAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI I E+ R ++ +LR L +
Sbjct: 60 VLMNIECSQEVIDELMHNFRFNDAILRDLVI 90
>gi|15834804|ref|NP_296563.1| 30S ribosomal protein S6 [Chlamydia muridarum Nigg]
gi|270284970|ref|ZP_06194364.1| 30S ribosomal protein S6 [Chlamydia muridarum Nigg]
gi|301336367|ref|ZP_07224569.1| 30S ribosomal protein S6 [Chlamydia muridarum MopnTet14]
gi|13959511|sp|Q9PLC1|RS6_CHLMU RecName: Full=30S ribosomal protein S6
gi|7190221|gb|AAF39058.1| ribosomal protein S6 [Chlamydia muridarum Nigg]
Length = 112
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + S I GGEV +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEDARRKALEKVTSGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ P AI E+ R+ ++E++LR +TL
Sbjct: 67 FIYFTVAPEAISELWREYHLNEDLLRFMTL 96
>gi|258405218|ref|YP_003197960.1| 30S ribosomal protein S6 [Desulfohalobium retbaense DSM 5692]
gi|257797445|gb|ACV68382.1| ribosomal protein S6 [Desulfohalobium retbaense DSM 5692]
Length = 106
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + L ++ + ++T+ ++ +I GG++ ++ G RT+AY I+K + +YV +
Sbjct: 5 YEALLLFHPEVGTDGRRETLDKFAGVINSQGGQIVEEDDWGKRTLAYPIQKVTRGHYVRL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHE 97
A A+ E++R++RI + +++ LT+ L D+ E
Sbjct: 65 EFALEGTAVTELERRIRITDGIMKFLTVKLADNFE 99
>gi|118579196|ref|YP_900446.1| 30S ribosomal protein S6 [Pelobacter propionicus DSM 2379]
gi|166227361|sp|A1AM18|RS6_PELPD RecName: Full=30S ribosomal protein S6
gi|118501906|gb|ABK98388.1| SSU ribosomal protein S6P [Pelobacter propionicus DSM 2379]
Length = 129
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ D+S IK + Q +I G+ + + + G+R +AY I K + Y
Sbjct: 1 MRKYETIYILQPDLSEDDIKVVADKVQDVITSYKGDFQRLEDWGIRKLAYPINKCARGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+++ I E++R++R+DE VLR ++ + + + P +
Sbjct: 61 LYLRYDGGREMIAELERRLRLDEKVLRFQSVNITNQPEKPVV 102
>gi|150010520|ref|YP_001305263.1| 30S ribosomal protein S6 [Parabacteroides distasonis ATCC 8503]
gi|256842193|ref|ZP_05547697.1| ribosomal protein S6 [Parabacteroides sp. D13]
gi|262384880|ref|ZP_06078012.1| ribosomal protein S6 [Bacteroides sp. 2_1_33B]
gi|298377640|ref|ZP_06987591.1| ribosomal protein S6 [Bacteroides sp. 3_1_19]
gi|301308938|ref|ZP_07214883.1| ribosomal protein S6 [Bacteroides sp. 20_3]
gi|166227359|sp|A6LIX7|RS6_PARD8 RecName: Full=30S ribosomal protein S6
gi|149938944|gb|ABR45641.1| ribosomal protein S6 [Parabacteroides distasonis ATCC 8503]
gi|256736077|gb|EEU49407.1| ribosomal protein S6 [Parabacteroides sp. D13]
gi|262293596|gb|EEY81532.1| ribosomal protein S6 [Bacteroides sp. 2_1_33B]
gi|298265343|gb|EFI07005.1| ribosomal protein S6 [Bacteroides sp. 3_1_19]
gi|300832964|gb|EFK63589.1| ribosomal protein S6 [Bacteroides sp. 20_3]
Length = 118
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++ +L++ G E+ VNE G+R +AY I K
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKAQGAEI--VNEENWGLRKLAYPIDKKTTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P+ I ++ R DE V+R LT D +
Sbjct: 59 FYQLVEFKADPSVIATLELNFRRDERVIRFLTFRQDKY 96
>gi|256833733|ref|YP_003162460.1| 30S ribosomal protein S6 [Jonesia denitrificans DSM 20603]
gi|256687264|gb|ACV10157.1| ribosomal protein S6 [Jonesia denitrificans DSM 20603]
Length = 95
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + TI + +++ GG V ++ G R +AY I K + Y
Sbjct: 1 MRQYELMMILSPDVEERNLNATIEKLLAVVPAEGGSVENIDIWGRRRMAYEIAKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + PA E++R++ ++E++LR L VD+
Sbjct: 61 AVINFTATPATTKELERQLGLNESILRIKVLRVDA 95
>gi|15605535|ref|NP_220321.1| 30S ribosomal protein S6 [Chlamydia trachomatis D/UW-3/CX]
gi|76789544|ref|YP_328630.1| 30S ribosomal protein S6 [Chlamydia trachomatis A/HAR-13]
gi|166154143|ref|YP_001654261.1| 30S ribosomal protein S6 [Chlamydia trachomatis 434/Bu]
gi|166155018|ref|YP_001653273.1| 30S ribosomal protein S6 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803232|ref|YP_002888426.1| 30S ribosomal protein S6 [Chlamydia trachomatis B/Jali20/OT]
gi|237805153|ref|YP_002889307.1| 30S ribosomal protein S6 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311637|ref|ZP_05354207.1| 30S ribosomal protein S6 [Chlamydia trachomatis 6276]
gi|255317938|ref|ZP_05359184.1| 30S ribosomal protein S6 [Chlamydia trachomatis 6276s]
gi|255349201|ref|ZP_05381208.1| 30S ribosomal protein S6 [Chlamydia trachomatis 70]
gi|255503738|ref|ZP_05382128.1| 30S ribosomal protein S6 [Chlamydia trachomatis 70s]
gi|255507419|ref|ZP_05383058.1| 30S ribosomal protein S6 [Chlamydia trachomatis D(s)2923]
gi|301335383|ref|ZP_07223627.1| 30S ribosomal protein S6 [Chlamydia trachomatis L2tet1]
gi|7388215|sp|O84807|RS6_CHLTR RecName: Full=30S ribosomal protein S6
gi|91207908|sp|Q3KKP0|RS6_CHLTA RecName: Full=30S ribosomal protein S6
gi|226703440|sp|B0B928|RS6_CHLT2 RecName: Full=30S ribosomal protein S6
gi|226703441|sp|B0BAQ7|RS6_CHLTB RecName: Full=30S ribosomal protein S6
gi|3329267|gb|AAC68396.1| S6 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76168074|gb|AAX51082.1| SSU ribosomal protein S6P [Chlamydia trachomatis A/HAR-13]
gi|165930131|emb|CAP03615.1| SSU ribosomal protein S6P [Chlamydia trachomatis 434/Bu]
gi|165931006|emb|CAP06569.1| SSU ribosomal protein S6P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273453|emb|CAX10368.1| SSU ribosomal protein S6P [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274466|emb|CAX11261.1| SSU ribosomal protein S6P [Chlamydia trachomatis B/Jali20/OT]
gi|289525846|emb|CBJ15327.1| SSU ribosomal protein S6P [Chlamydia trachomatis Sweden2]
gi|296435428|gb|ADH17606.1| 30S ribosomal protein S6 [Chlamydia trachomatis E/150]
gi|296436352|gb|ADH18526.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/9768]
gi|296437283|gb|ADH19453.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/11222]
gi|296438211|gb|ADH20372.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/11074]
gi|296439145|gb|ADH21298.1| 30S ribosomal protein S6 [Chlamydia trachomatis E/11023]
gi|297140712|gb|ADH97470.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/9301]
gi|297748929|gb|ADI51475.1| SSU ribosomal protein S6P [Chlamydia trachomatis D-EC]
gi|297749809|gb|ADI52487.1| SSU ribosomal protein S6P [Chlamydia trachomatis D-LC]
Length = 112
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + S I GGEV +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEDARRKALEKVTSGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ P AI E+ R+ ++E++LR +TL
Sbjct: 67 FIYFTVAPEAIAELWREYHLNEDLLRFMTL 96
>gi|313894832|ref|ZP_07828392.1| ribosomal protein S6 [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976513|gb|EFR41968.1| ribosomal protein S6 [Selenomonas sp. oral taxon 137 str. F0430]
Length = 102
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ + + I ++ LIQ NGG + + G + +AY I + + YY
Sbjct: 1 MRMYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEINDHSEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + + PA + E R M+I +++L+ + +
Sbjct: 60 VLLYVNAEPACVAECDRVMKITDDLLKHMIV 90
>gi|145597065|ref|YP_001161362.1| 30S ribosomal protein S6 [Salinispora tropica CNB-440]
gi|189045493|sp|A4XDG8|RS6_SALTO RecName: Full=30S ribosomal protein S6
gi|145306402|gb|ABP56984.1| SSU ribosomal protein S6P [Salinispora tropica CNB-440]
Length = 96
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDSSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + PAA+ E+ R++R++E+VLR+
Sbjct: 61 AVIDLQATPAAVAELDRQLRLNESVLRT 88
>gi|15828450|ref|NP_302713.1| 30S ribosomal protein S6 [Mycobacterium leprae TN]
gi|221230927|ref|YP_002504343.1| 30S ribosomal protein S6 [Mycobacterium leprae Br4923]
gi|1173272|sp|P46389|RS6_MYCLE RecName: Full=30S ribosomal protein S6
gi|886305|gb|AAB53121.1| 30S ribosomal protein S6 [Mycobacterium leprae]
gi|2959412|emb|CAA17954.1| 30s ribosomal protein s6 [Mycobacterium leprae]
gi|13093880|emb|CAC32217.1| 30S ribosomal protein S6 [Mycobacterium leprae]
gi|219934034|emb|CAR72785.1| 30S ribosomal protein S6 [Mycobacterium leprae Br4923]
Length = 96
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ + ++++++GG + V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDECTVGPSLETFLNVVRKDGGAIDKVDIWGRRRLAYEISKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDLKAAPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|152992024|ref|YP_001357745.1| 30S ribosomal protein S6 [Sulfurovum sp. NBC37-1]
gi|166227395|sp|A6Q7C9|RS6_SULNB RecName: Full=30S ribosomal protein S6
gi|151423885|dbj|BAF71388.1| 30S ribosomal protein S6 [Sulfurovum sp. NBC37-1]
Length = 127
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ ++ ++ I + + ++ + E+ +++GMR +AY ++KN + YY
Sbjct: 1 MNCYETLFVVKPTLTEEETAAEIAKIKDVLAKVDAELLATDDMGMRKLAYPVQKNDRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + AI E++R ++I+E V++ LT+
Sbjct: 61 TVLFYKANGEAIAEIERNLKINEEVIKFLTV 91
>gi|255527664|ref|ZP_05394523.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|296186803|ref|ZP_06855204.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|255508644|gb|EET85025.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|296048517|gb|EFG87950.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
Length = 95
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + +K + +++ +I+ GG V V+ G R +AY I K + Y
Sbjct: 1 MRKYETIFILHPSLDEEAVKANVEKFKGVIENGGGVVDNVDAWGKRKLAYEINKIGEGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N ++ P E+ R RI + V+R + +
Sbjct: 61 TLINFSAGPELPKELDRVFRITDTVIRHIIV 91
>gi|228469684|ref|ZP_04054652.1| ribosomal protein S6 [Porphyromonas uenonis 60-3]
gi|228308703|gb|EEK17429.1| ribosomal protein S6 [Porphyromonas uenonis 60-3]
Length = 115
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ S + G + G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDAQMKEAVDKFTSHLTSAGATIVNDEHWGLKKLAYPIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F+ + P+ I + MR DE VLR +T+ D
Sbjct: 61 HFIEFDAEPSVIKPFETLMRRDETVLRYITIAQD 94
>gi|16081143|ref|NP_391971.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312073|ref|ZP_03593920.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
168]
gi|221316398|ref|ZP_03598203.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221321311|ref|ZP_03602605.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221325594|ref|ZP_03606888.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313651|ref|YP_004205938.1| 30S ribosomal protein S6 [Bacillus subtilis BSn5]
gi|585949|sp|P21468|RS6_BACSU RecName: Full=30S ribosomal protein S6; AltName: Full=BS9
gi|467375|dbj|BAA05221.1| ribosomal protein S6 [Bacillus subtilis]
gi|2636638|emb|CAB16128.1| ribosomal protein S6 (BS9) [Bacillus subtilis subsp. subtilis
str. 168]
gi|291486728|dbj|BAI87803.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. natto BEST195]
gi|320019925|gb|ADV94911.1| 30S ribosomal protein S6 [Bacillus subtilis BSn5]
Length = 95
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHIVV 91
>gi|260881439|ref|ZP_05404415.2| ribosomal protein S6 [Mitsuokella multacida DSM 20544]
gi|260848789|gb|EEX68796.1| ribosomal protein S6 [Mitsuokella multacida DSM 20544]
Length = 95
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + I ++ +LIQ NGG + + G + +AY I+ + YY
Sbjct: 1 MRKYEVIFIVKP-MEEDATNAVIEKFSNLIQNNGGTIDKEDRWGKKRLAYEIKDCTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
N+ PA + E R M+I + +L+ ++V S E+
Sbjct: 60 CLFNVTCEPACVAECDRVMKITDELLKH--MIVKSDEE 95
>gi|224368966|ref|YP_002603130.1| 30S ribosomal protein S6 [Desulfobacterium autotrophicum HRM2]
gi|259495330|sp|C0QBV4|RS6_DESAH RecName: Full=30S ribosomal protein S6
gi|223691683|gb|ACN14966.1| RpsF [Desulfobacterium autotrophicum HRM2]
Length = 155
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 56/105 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+ D+ + +++ ++++ GG + ++ G + +AY I K + +Y
Sbjct: 1 MRMYETIFITDPDLQDEVRNTLFDRFKGILEQEGGILANFDDWGNKKLAYEIAKKPRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V M + E++R R+D+ +L+ +T+L++ L +Q
Sbjct: 61 VCMTYGGTGTLVTELERNFRLDDKILKYMTILLEKDIDPEALKLQ 105
>gi|290968077|ref|ZP_06559626.1| ribosomal protein S6 [Megasphaera genomosp. type_1 str. 28L]
gi|290781983|gb|EFD94562.1| ribosomal protein S6 [Megasphaera genomosp. type_1 str. 28L]
Length = 94
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+ R + + +K I +L+++NG +V + G R +AY ++K YY
Sbjct: 1 MNKYEVMFIARP-LEDEAVKPIIEFVDALLKKNGAKVEKIEPWGKRHLAYPVKKQNDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + P I E+ R M+I + +L+ L + +D
Sbjct: 60 VLVNFEAEPDIIKEIDRVMKIRDEILKQLIVKIDE 94
>gi|169832353|ref|YP_001718335.1| 30S ribosomal protein S6 [Candidatus Desulforudis audaxviator
MP104C]
gi|226703452|sp|B1I6T1|RS6_DESAP RecName: Full=30S ribosomal protein S6
gi|169639197|gb|ACA60703.1| ribosomal protein S6 [Candidatus Desulforudis audaxviator MP104C]
Length = 94
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ D+ ++ I ++ +I + GE+ +N G R +AY I+ R+ +Y
Sbjct: 1 MRQYEVMYILKPDLEDEESTQLIEKFSKIITDRDGEITELNRWGKRRLAYEIKDYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + AA E+ R RI + +LR + +
Sbjct: 61 VVMKCRAEHAAAQELDRVFRITDGLLRHMII 91
>gi|312200939|ref|YP_004021000.1| ribosomal protein S6 [Frankia sp. EuI1c]
gi|311232275|gb|ADP85130.1| ribosomal protein S6 [Frankia sp. EuI1c]
Length = 113
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 52/85 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L D+ + + ++ Q+ S+++ GG V V+ G R +AY IRK+ + Y +
Sbjct: 9 YELMVILDPDLEERTVSPSLDQFLSVVRNGGGAVEKVDVWGRRRLAYEIRKSHEGIYAVI 68
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
++ + P + E+ R++ ++E+V+R+
Sbjct: 69 DLHAEPDVVAELDRQLTLNESVIRT 93
>gi|30023498|ref|NP_835129.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 14579]
gi|42784670|ref|NP_981917.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10987]
gi|206970119|ref|ZP_03231072.1| 30S ribosomal protein S6 [Bacillus cereus AH1134]
gi|218233563|ref|YP_002370249.1| 30S ribosomal protein S6 [Bacillus cereus B4264]
gi|228955725|ref|ZP_04117720.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229072939|ref|ZP_04206135.1| 30S ribosomal protein S6 [Bacillus cereus F65185]
gi|229082683|ref|ZP_04215137.1| 30S ribosomal protein S6 [Bacillus cereus Rock4-2]
gi|229112887|ref|ZP_04242418.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-15]
gi|229130720|ref|ZP_04259673.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-Cer4]
gi|229148024|ref|ZP_04276363.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST24]
gi|229153633|ref|ZP_04281809.1| 30S ribosomal protein S6 [Bacillus cereus m1550]
gi|229181720|ref|ZP_04309043.1| 30S ribosomal protein S6 [Bacillus cereus 172560W]
gi|229193725|ref|ZP_04320666.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10876]
gi|296505902|ref|YP_003667602.1| 30S ribosomal protein S6 [Bacillus thuringiensis BMB171]
gi|61215625|sp|Q72WV3|RS6_BACC1 RecName: Full=30S ribosomal protein S6
gi|61215739|sp|Q814G5|RS6_BACCR RecName: Full=30S ribosomal protein S6
gi|226703419|sp|B7HGD4|RS6_BACC4 RecName: Full=30S ribosomal protein S6
gi|29899059|gb|AAP12330.1| SSU ribosomal protein S6P [Bacillus cereus ATCC 14579]
gi|42740602|gb|AAS44525.1| ribosomal protein S6 [Bacillus cereus ATCC 10987]
gi|206734696|gb|EDZ51865.1| 30S ribosomal protein S6 [Bacillus cereus AH1134]
gi|218161520|gb|ACK61512.1| ribosomal protein S6 [Bacillus cereus B4264]
gi|228589750|gb|EEK47628.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10876]
gi|228601753|gb|EEK59251.1| 30S ribosomal protein S6 [Bacillus cereus 172560W]
gi|228629819|gb|EEK86472.1| 30S ribosomal protein S6 [Bacillus cereus m1550]
gi|228635449|gb|EEK91940.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST24]
gi|228652737|gb|EEL08622.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-Cer4]
gi|228670566|gb|EEL25879.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-15]
gi|228700628|gb|EEL53160.1| 30S ribosomal protein S6 [Bacillus cereus Rock4-2]
gi|228710185|gb|EEL62163.1| 30S ribosomal protein S6 [Bacillus cereus F65185]
gi|228803953|gb|EEM50577.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|296326954|gb|ADH09882.1| 30S ribosomal protein S6 [Bacillus thuringiensis BMB171]
gi|324329425|gb|ADY24685.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 96
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 61 MILNVKSNAEAINEFDRLAKINEDILRHIVV 91
>gi|170761522|ref|YP_001788970.1| 30S ribosomal protein S6 [Clostridium botulinum A3 str. Loch
Maree]
gi|226703443|sp|B1KU97|RS6_CLOBM RecName: Full=30S ribosomal protein S6
gi|169408511|gb|ACA56922.1| 30S ribosomal protein S6 [Clostridium botulinum A3 str. Loch
Maree]
Length = 94
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ +GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENSGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + E+ R RI + V+R + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMII 91
>gi|313887203|ref|ZP_07820899.1| ribosomal protein S6 [Porphyromonas asaccharolytica PR426713P-I]
gi|332300446|ref|YP_004442367.1| 30S ribosomal protein S6 [Porphyromonas asaccharolytica DSM
20707]
gi|312923432|gb|EFR34245.1| ribosomal protein S6 [Porphyromonas asaccharolytica PR426713P-I]
gi|332177509|gb|AEE13199.1| 30S ribosomal protein S6 [Porphyromonas asaccharolytica DSM
20707]
Length = 115
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ S + G + G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDAQMKEAVDKFTSHLTSAGATIVNDEHWGLKKLAYPIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F+ + P+ I + +R DE VLR LT+ D
Sbjct: 61 HFIEFDAEPSVIKPFETLLRRDETVLRYLTIAQD 94
>gi|238855512|ref|ZP_04645817.1| ribosomal protein S6 [Lactobacillus jensenii 269-3]
gi|260665216|ref|ZP_05866065.1| ribosomal protein S6 [Lactobacillus jensenii SJ-7A-US]
gi|282931538|ref|ZP_06337037.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|313472769|ref|ZP_07813257.1| ribosomal protein S6 [Lactobacillus jensenii 1153]
gi|238831878|gb|EEQ24210.1| ribosomal protein S6 [Lactobacillus jensenii 269-3]
gi|260560953|gb|EEX26928.1| ribosomal protein S6 [Lactobacillus jensenii SJ-7A-US]
gi|281304345|gb|EFA96448.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|313448868|gb|EEQ68061.2| ribosomal protein S6 [Lactobacillus jensenii 1153]
Length = 97
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ DI + K + +Y +I +NG + + G R AY I K R+ Y M
Sbjct: 5 YEVTYIIKPDIDDEAKKAVVDKYDKIIADNGATMVESKDWGKRRFAYEINKYREGTYHIM 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A+ E R RID VLRS+T+ +D
Sbjct: 65 TFTAEDAKAVDEFGRLSRIDNQVLRSMTVKLD 96
>gi|221068654|ref|ZP_03544759.1| ribosomal protein S6 [Comamonas testosteroni KF-1]
gi|220713677|gb|EED69045.1| ribosomal protein S6 [Comamonas testosteroni KF-1]
Length = 120
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +NI + A + E++ + ++ VLR LT+
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTV 90
>gi|255016569|ref|ZP_05288695.1| 30S ribosomal protein S6 [Bacteroides sp. 2_1_7]
Length = 145
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++ +L++ G E+ VNE G+R +AY I K
Sbjct: 28 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKAQGAEI--VNEENWGLRKLAYPIDKKTTG 85
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P+ I ++ R DE V+R LT D +
Sbjct: 86 FYQLVEFKADPSVIATLELNFRRDERVIRFLTFRQDKY 123
>gi|238061879|ref|ZP_04606588.1| 30S ribosomal protein S6 [Micromonospora sp. ATCC 39149]
gi|237883690|gb|EEP72518.1| 30S ribosomal protein S6 [Micromonospora sp. ATCC 39149]
Length = 96
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + PAA+ E+ R++R++E+VLR+
Sbjct: 61 AVVDLQATPAAVAELDRQLRLNESVLRT 88
>gi|157414312|ref|YP_001485178.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9215]
gi|157388887|gb|ABV51592.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9215]
Length = 157
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 12 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGSILDSQMRGKRRLAYQIAKHREGIYVQL 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++++ MR+ E+V+R +T+
Sbjct: 72 SHQGDGQHIFKIEKAMRLSEDVIRYMTV 99
>gi|312141934|ref|YP_004009270.1| 30S ribosomal protein s6 rpsf [Rhodococcus equi 103S]
gi|325672812|ref|ZP_08152506.1| 30S ribosomal protein S6 [Rhodococcus equi ATCC 33707]
gi|311891273|emb|CBH50594.1| 30S ribosomal protein S6 RpsF [Rhodococcus equi 103S]
gi|325556065|gb|EGD25733.1| 30S ribosomal protein S6 [Rhodococcus equi ATCC 33707]
Length = 95
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +A+ I KN + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRKDGGNVDKVDVWGKRRLAFEIAKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++I + PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AVVDITAEPATVKELDRQLGLNESVLRTKVL 91
>gi|228961738|ref|ZP_04123341.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228797932|gb|EEM44942.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 113
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 78 MILNVKSNAEAINEFDRLAKINEDILRHIVV 108
>gi|150002621|ref|YP_001297365.1| 30S ribosomal protein S6 [Bacteroides vulgatus ATCC 8482]
gi|254881415|ref|ZP_05254125.1| 30S ribosomal protein S6 [Bacteroides sp. 4_3_47FAA]
gi|294776101|ref|ZP_06741594.1| ribosomal protein S6 [Bacteroides vulgatus PC510]
gi|319642802|ref|ZP_07997440.1| hypothetical protein HMPREF9011_03040 [Bacteroides sp. 3_1_40A]
gi|166226801|sp|A6KWD7|RS6_BACV8 RecName: Full=30S ribosomal protein S6
gi|149931045|gb|ABR37743.1| 30S ribosomal protein S6 [Bacteroides vulgatus ATCC 8482]
gi|254834208|gb|EET14517.1| 30S ribosomal protein S6 [Bacteroides sp. 4_3_47FAA]
gi|294450052|gb|EFG18559.1| ribosomal protein S6 [Bacteroides vulgatus PC510]
gi|317385546|gb|EFV66487.1| hypothetical protein HMPREF9011_03040 [Bacteroides sp. 3_1_40A]
Length = 114
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT +D +
Sbjct: 59 FYQLIEFKAEPQVIEKLEINFRRDERVIRFLTFKMDKY 96
>gi|71065894|ref|YP_264621.1| 30S ribosomal protein S6 [Psychrobacter arcticus 273-4]
gi|91207784|sp|Q4FS21|RS6_PSYA2 RecName: Full=30S ribosomal protein S6
gi|71038879|gb|AAZ19187.1| SSU ribosomal protein S6P [Psychrobacter arcticus 273-4]
Length = 132
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y L+Q+N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V NI + + E++ R ++ ++RSL +
Sbjct: 60 VLFNIETDGETLAELEELFRYNDAIIRSLVM 90
>gi|297563759|ref|YP_003682733.1| ribosomal protein S6 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848207|gb|ADH70227.1| ribosomal protein S6 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 96
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ + +++ +GG V V+ G R +AY I KN + Y
Sbjct: 1 MRRYELMIILDPNLDERTVAPSLENFLGVVRNDGGSVEKVDIWGKRRLAYDIDKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ I E VLR+ L + H
Sbjct: 61 AVIDLTAEPATVKELDRQLGIAEAVLRTKVLRPEVH 96
>gi|256851680|ref|ZP_05557068.1| ribosomal protein S6 [Lactobacillus jensenii 27-2-CHN]
gi|260661603|ref|ZP_05862515.1| ribosomal protein S6 [Lactobacillus jensenii 115-3-CHN]
gi|282934236|ref|ZP_06339513.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|297205289|ref|ZP_06922685.1| 30S ribosomal protein S6 [Lactobacillus jensenii JV-V16]
gi|256615638|gb|EEU20827.1| ribosomal protein S6 [Lactobacillus jensenii 27-2-CHN]
gi|260547660|gb|EEX23638.1| ribosomal protein S6 [Lactobacillus jensenii 115-3-CHN]
gi|281301710|gb|EFA93977.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|297149867|gb|EFH30164.1| 30S ribosomal protein S6 [Lactobacillus jensenii JV-V16]
Length = 97
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ DI + K + +Y +I +NG + + G R AY I K R+ Y M
Sbjct: 5 YEVTYIIKPDIDDEAKKAVVDKYDKVIADNGATMVESKDWGKRRFAYEINKYREGTYHIM 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A+ E R RID VLRS+T+ +D
Sbjct: 65 TFTAEDAKAVDEFGRLSRIDNQVLRSMTVKLD 96
>gi|182416762|ref|ZP_02948159.1| ribosomal protein S6 [Clostridium butyricum 5521]
gi|237669664|ref|ZP_04529642.1| ribosomal protein S6 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379419|gb|EDT76914.1| ribosomal protein S6 [Clostridium butyricum 5521]
gi|237654898|gb|EEP52460.1| ribosomal protein S6 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 95
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + +K I +++ +I+ GG V V+ G R +AY I K + YY
Sbjct: 1 MRKYETIFILNPSFDEETVKANIEKFKGVIENGGGTVENVDFWGKRKLAYEIAKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + E+ R RI + V+R + +
Sbjct: 61 TLVNFTAGTELPRELDRIFRITDGVIRHIIV 91
>gi|163788026|ref|ZP_02182472.1| 30S ribosomal protein S6 [Flavobacteriales bacterium ALC-1]
gi|159876346|gb|EDP70404.1| 30S ribosomal protein S6 [Flavobacteriales bacterium ALC-1]
Length = 116
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEDQIKETVKKYEDFLVSKGAKMIAKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
AI ++ + R DE +R LT+ +D H
Sbjct: 61 HLFEYTVAGEAIEPLEVEFRRDERFMRYLTVKLDKH 96
>gi|21672805|ref|NP_660872.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009193|sp|Q8K918|RS6_BUCAP RecName: Full=30S ribosomal protein S6
gi|21623455|gb|AAM68083.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 113
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S+++ I +Y+ +I N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFMIHPD-YSEKVSVIIEKYKKIIHHNSGIIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTL 102
+ +NI + P I ++ R + V+R++ + V +E SP +
Sbjct: 60 ILLNIETFPKTISLLETDFRFNNAVIRNIIISVKKAINEPSPVI 103
>gi|27904982|ref|NP_778108.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|31076865|sp|Q89A41|RS6_BUCBP RecName: Full=30S ribosomal protein S6
gi|27904380|gb|AAO27213.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 119
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+++ I +++ L+ G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-CSEKLPIMIEKFKKLVIGYKGRIHRLEDWGRRQLAYSINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDR 115
MNI P I ++ R D+ V+R++ + V E SP L + D+ D+ DR
Sbjct: 60 FLMNIEVPSNCIQDLSNTFRYDDLVIRNIIMHVKKSVTEISPMLK-SKEDKLDKKDR 115
>gi|228994193|ref|ZP_04154093.1| 30S ribosomal protein S6 [Bacillus pseudomycoides DSM 12442]
gi|229000263|ref|ZP_04159832.1| 30S ribosomal protein S6 [Bacillus mycoides Rock3-17]
gi|228759595|gb|EEM08572.1| 30S ribosomal protein S6 [Bacillus mycoides Rock3-17]
gi|228765645|gb|EEM14299.1| 30S ribosomal protein S6 [Bacillus pseudomycoides DSM 12442]
Length = 96
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R ++ + K + ++ ++ NG E+ E G R +AY I R +Y
Sbjct: 1 MKKYEIMYIIRPNMEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S A+ E R +I+E++LR + +
Sbjct: 61 MILNVNSDAEAVKEFDRLAKINEDILRHIVV 91
>gi|218900615|ref|YP_002449026.1| ribosomal protein S6 [Bacillus cereus G9842]
gi|228905418|ref|ZP_04069373.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 4222]
gi|228911313|ref|ZP_04075117.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 200]
gi|228942623|ref|ZP_04105155.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228968626|ref|ZP_04129609.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228975553|ref|ZP_04136105.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982189|ref|ZP_04142478.1| 30S ribosomal protein S6 [Bacillus thuringiensis Bt407]
gi|229035132|ref|ZP_04189078.1| 30S ribosomal protein S6 [Bacillus cereus AH1271]
gi|229099901|ref|ZP_04230824.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-29]
gi|229106066|ref|ZP_04236681.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-28]
gi|226703418|sp|B7IS18|RS6_BACC2 RecName: Full=30S ribosomal protein S6
gi|218541892|gb|ACK94286.1| ribosomal protein S6 [Bacillus cereus G9842]
gi|228677352|gb|EEL31614.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-28]
gi|228683516|gb|EEL37471.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-29]
gi|228728198|gb|EEL79228.1| 30S ribosomal protein S6 [Bacillus cereus AH1271]
gi|228777541|gb|EEM25819.1| 30S ribosomal protein S6 [Bacillus thuringiensis Bt407]
gi|228784163|gb|EEM32190.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791055|gb|EEM38673.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228817049|gb|EEM63142.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228848331|gb|EEM93181.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 200]
gi|228854238|gb|EEM98941.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 4222]
gi|326943272|gb|AEA19168.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 96
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIVV 91
>gi|222823952|ref|YP_002575526.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
gi|254765227|sp|B9KCI6|RS6_CAMLR RecName: Full=30S ribosomal protein S6
gi|222539174|gb|ACM64275.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
Length = 124
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MRHYEVLFILKPTLTEEEVSAKLEFVKEVLTKNGAEIESVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|218562684|ref|YP_002344463.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|9297123|sp|Q9ZAH3|RS6_CAMJE RecName: Full=30S ribosomal protein S6
gi|112360390|emb|CAL35187.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926299|gb|ADC28651.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928750|gb|EFV08025.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 305]
Length = 125
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +N E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNTKLEFVKEVLTKNSAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|281603662|gb|ADA76646.1| 30S ribosomal protein S6 [Shigella flexneri 2002017]
gi|313646323|gb|EFS10785.1| ribosomal protein S6 [Shigella flexneri 2a str. 2457T]
gi|332083775|gb|EGI88993.1| ribosomal protein S6 [Shigella dysenteriae 155-74]
gi|332749344|gb|EGJ79765.1| ribosomal protein S6 [Shigella flexneri 4343-70]
gi|332763252|gb|EGJ93495.1| ribosomal protein S6 [Shigella flexneri 2930-71]
Length = 123
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y + I G++ + + G R +AY I K KA+YV MN+ +P I E+
Sbjct: 7 SEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ R ++ V+RS+ + E SP + + +R +R D F + D + SEE
Sbjct: 67 ETTFRFNDAVIRSMVMRTKHAVTEASP-MVKAKDERRERRDDFANETADDAEAGDSEE 123
>gi|163943154|ref|YP_001648038.1| 30S ribosomal protein S6 [Bacillus weihenstephanensis KBAB4]
gi|229026915|ref|ZP_04183238.1| 30S ribosomal protein S6 [Bacillus cereus AH1272]
gi|229164425|ref|ZP_04292353.1| 30S ribosomal protein S6 [Bacillus cereus R309803]
gi|226703421|sp|A9VTL0|RS6_BACWK RecName: Full=30S ribosomal protein S6
gi|163865351|gb|ABY46410.1| ribosomal protein S6 [Bacillus weihenstephanensis KBAB4]
gi|228619030|gb|EEK75928.1| 30S ribosomal protein S6 [Bacillus cereus R309803]
gi|228734373|gb|EEL85044.1| 30S ribosomal protein S6 [Bacillus cereus AH1272]
Length = 96
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 61 MILNVNSNSEAINEFDRLAKINEDILRHIVV 91
>gi|218128602|ref|ZP_03457406.1| hypothetical protein BACEGG_00172 [Bacteroides eggerthii DSM
20697]
gi|317475594|ref|ZP_07934856.1| ribosomal protein S6 [Bacteroides eggerthii 1_2_48FAA]
gi|329957653|ref|ZP_08298128.1| ribosomal protein S6 [Bacteroides clarus YIT 12056]
gi|329960226|ref|ZP_08298668.1| ribosomal protein S6 [Bacteroides fluxus YIT 12057]
gi|217989204|gb|EEC55518.1| hypothetical protein BACEGG_00172 [Bacteroides eggerthii DSM
20697]
gi|316908298|gb|EFV29990.1| ribosomal protein S6 [Bacteroides eggerthii 1_2_48FAA]
gi|328522530|gb|EGF49639.1| ribosomal protein S6 [Bacteroides clarus YIT 12056]
gi|328532899|gb|EGF59676.1| ribosomal protein S6 [Bacteroides fluxus YIT 12057]
Length = 114
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT D +
Sbjct: 59 FYQLIEFNAEPTVIEKLELNFRRDERVIRFLTFKQDKY 96
>gi|225181167|ref|ZP_03734613.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
gi|225168136|gb|EEG76941.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
Length = 96
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN-RKAY 59
M YE +F+L+ ++ + + +++ +++ G EV VN +G R +AY ++K + Y
Sbjct: 1 MNKYETMFILKPELEEEAYDTLVERFKGILEGEGAEVTNVNRMGRRKLAYEVKKKFNEGY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
YV N A E++R RI ++V+R L
Sbjct: 61 YVLFNYTGESRATDELERNFRISDDVIRYL 90
>gi|170077069|ref|YP_001733707.1| ribosomal protein S6 [Synechococcus sp. PCC 7002]
gi|226695134|sp|B1XP08|RS6_SYNP2 RecName: Full=30S ribosomal protein S6
gi|169884738|gb|ACA98451.1| ribosomal protein S6 [Synechococcus sp. PCC 7002]
Length = 115
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+S +Q+++ +Y++++Q++G V G R +AY I+ Y+ +
Sbjct: 5 YEMMYILRPDLSEEQVQEVSSKYKTMLQDSGASDLQVQVRGKRHLAYPIQNFNDGIYIQV 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
N + + I ++R MR+ E V+R LT+ +D+
Sbjct: 65 NYKADGSQIKAVERDMRLGEMVIRYLTMKLDAE 97
>gi|93005860|ref|YP_580297.1| 30S ribosomal protein S6 [Psychrobacter cryohalolentis K5]
gi|122415535|sp|Q1QBZ0|RS6_PSYCK RecName: Full=30S ribosomal protein S6
gi|92393538|gb|ABE74813.1| SSU ribosomal protein S6P [Psychrobacter cryohalolentis K5]
Length = 131
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y L+Q+N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V NI + + E++ R ++ ++RSL +
Sbjct: 60 VLFNIETDGETLAELEELFRYNDAIIRSLVM 90
>gi|75763192|ref|ZP_00742957.1| SSU ribosomal protein S6P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|229118964|ref|ZP_04248309.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-3]
gi|74489324|gb|EAO52775.1| SSU ribosomal protein S6P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228664489|gb|EEL19985.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-3]
Length = 113
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 78 MILNVNSNAEAINEFDRLAKINEDILRHIVV 108
>gi|330752553|emb|CBL87500.1| Ribosomal protein S6 [uncultured Flavobacteria bacterium]
Length = 111
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ ++ SLI+ ++ G++ + Y I+ R +Y
Sbjct: 1 MNKYETVFILNPVLSESQVKETVEKFSSLIKGLKSKITHEENWGLKKLKYPIQNKRTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
S P E++ + + DE VLR L++ +D H
Sbjct: 61 HMFEHESDPQTTKELEVEFKRDERVLRWLSVKLDKH 96
>gi|312135779|ref|YP_004003117.1| 30S ribosomal protein S6 [Caldicellulosiruptor owensensis OL]
gi|311775830|gb|ADQ05317.1| ribosomal protein S6 [Caldicellulosiruptor owensensis OL]
Length = 96
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + + I ++++LI NG ++ V E G + +AY+I K+ + YYV M
Sbjct: 6 YETVFIISPTLDDEARANLIEKFKNLISSNG-QLLTVEEWGKKRLAYKIDKHAEGYYVLM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R LT+
Sbjct: 65 QFISKPEFPRELERVYRITDGVIRFLTV 92
>gi|148381565|ref|YP_001256106.1| ribosomal protein S6 [Clostridium botulinum A str. ATCC 3502]
gi|153934321|ref|YP_001385942.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC
19397]
gi|153934983|ref|YP_001389349.1| 30S ribosomal protein S6 [Clostridium botulinum A str. Hall]
gi|166226821|sp|A7FZH1|RS6_CLOB1 RecName: Full=30S ribosomal protein S6
gi|166226822|sp|A5I801|RS6_CLOBH RecName: Full=30S ribosomal protein S6
gi|148291049|emb|CAL85186.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC 3502]
gi|152930365|gb|ABS35865.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC
19397]
gi|152930897|gb|ABS36396.1| 30S ribosomal protein S6 [Clostridium botulinum A str. Hall]
Length = 94
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPTLDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + E+ R RI + V+R + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMII 91
>gi|15896955|ref|NP_350304.1| 30S ribosomal protein S6 [Clostridium acetobutylicum ATCC 824]
gi|24212323|sp|Q97CX2|RS6_CLOAB RecName: Full=30S ribosomal protein S6
gi|15026830|gb|AAK81644.1|AE007867_11 Ribosomal protein S6 [Clostridium acetobutylicum ATCC 824]
gi|325511132|gb|ADZ22768.1| 30S ribosomal protein S6 [Clostridium acetobutylicum EA 2018]
Length = 95
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L + + I + +++S+I GGEV V+ G R +AY I K + Y
Sbjct: 1 MNKYETLFILNPSLDEEGINTNVEKFKSVITNGGGEVENVDLWGKRKLAYEIDKVNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N S E+ R RI ++++R L +
Sbjct: 61 VLVNFQSDAQLPKELDRVFRISDSIIRHLII 91
>gi|91070594|gb|ABE11494.1| 30S ribosomal protein S6 [uncultured Prochlorococcus marinus
clone HOT0M-8F9]
Length = 157
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 12 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++++ MR+ E+V+R +T+
Sbjct: 72 SHQGDGQHIFKIEKAMRLSEDVIRYMTV 99
>gi|150025894|ref|YP_001296720.1| 30S ribosomal protein S6 [Flavobacterium psychrophilum JIP02/86]
gi|166226830|sp|A6H0P3|RS6_FLAPJ RecName: Full=30S ribosomal protein S6
gi|149772435|emb|CAL43917.1| 30S ribosomal protein S6 [Flavobacterium psychrophilum JIP02/86]
Length = 113
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + G + + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQVKETVSKFEDYLTSKGATMVSKEDWGLKKMAYEIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
P + + + R DE V+R LT+ +D H S
Sbjct: 61 HLFEFTVPGEVLIGFETEFRRDERVMRFLTVSLDKHAIS 99
>gi|313836464|gb|EFS74178.1| ribosomal protein S6 [Propionibacterium acnes HL037PA2]
gi|314928919|gb|EFS92750.1| ribosomal protein S6 [Propionibacterium acnes HL044PA1]
gi|314971090|gb|EFT15188.1| ribosomal protein S6 [Propionibacterium acnes HL037PA3]
Length = 96
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIVDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +N PA I EM R + IDE ++R+
Sbjct: 61 VVVNATCEPATIQEMDRLLAIDEKIMRT 88
>gi|46447226|ref|YP_008591.1| 30S ribosomal protein S6 [Candidatus Protochlamydia amoebophila
UWE25]
gi|61216205|sp|Q6MAT3|RS6_PARUW RecName: Full=30S ribosomal protein S6
gi|46400867|emb|CAF24316.1| putative ribosomal protein S6 (BS9) [Candidatus Protochlamydia
amoebophila UWE25]
Length = 114
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 55/92 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++++ +S + + Q+ I +GGE++ ++E G R +AY I +R+ YY
Sbjct: 8 LYEGMYVISATLSDDARHKALDRIQTGITGHGGEIKKLHEQGRRRLAYEIDGHREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +P +AI ++ ++ ++E+++R +TL D
Sbjct: 68 VYFTAPSSAISDLWQEYHLNEDLIRFITLRTD 99
>gi|311070631|ref|YP_003975554.1| 30S ribosomal protein S6 [Bacillus atrophaeus 1942]
gi|310871148|gb|ADP34623.1| 30S ribosomal protein S6 [Bacillus atrophaeus 1942]
Length = 95
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYEVMYIIRPNVDDESKKAVVERFNNVLTSNGAEITGTKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHVVV 91
>gi|212691068|ref|ZP_03299196.1| hypothetical protein BACDOR_00558 [Bacteroides dorei DSM 17855]
gi|237726622|ref|ZP_04557103.1| 30S ribosomal protein S6 [Bacteroides sp. D4]
gi|265752134|ref|ZP_06087927.1| 30S ribosomal protein S6 [Bacteroides sp. 3_1_33FAA]
gi|212666300|gb|EEB26872.1| hypothetical protein BACDOR_00558 [Bacteroides dorei DSM 17855]
gi|229435148|gb|EEO45225.1| 30S ribosomal protein S6 [Bacteroides dorei 5_1_36/D4]
gi|263236926|gb|EEZ22396.1| 30S ribosomal protein S6 [Bacteroides sp. 3_1_33FAA]
Length = 114
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT +D +
Sbjct: 59 FYQLIEFKAEPQVIKKLEINFRRDERVIRFLTFKMDKY 96
>gi|108803691|ref|YP_643628.1| 30S ribosomal protein S6P [Rubrobacter xylanophilus DSM 9941]
gi|108764934|gb|ABG03816.1| SSU ribosomal protein S6P [Rubrobacter xylanophilus DSM 9941]
Length = 147
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV-RLVNELGMRTIAYRIRKNRKAYY 60
++YE + ++ ++ +Q++ T+ +++++I+ GGEV N G R +AY I AYY
Sbjct: 36 RIYEVMLIIIPELDEEQVQSTVSRFRTVIERTGGEVVGEPNHWGKRKLAYEIDHRSDAYY 95
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + + E+KR +R+ ++VLR + +
Sbjct: 96 VVMEFTAGDRTLVELKRILRVSDDVLRHMIV 126
>gi|319899908|ref|YP_004159636.1| SSU ribosomal protein S6P [Bacteroides helcogenes P 36-108]
gi|319414939|gb|ADV42050.1| SSU ribosomal protein S6P [Bacteroides helcogenes P 36-108]
Length = 114
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTSEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT D +
Sbjct: 59 FYQLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKY 96
>gi|229014640|ref|ZP_04171754.1| 30S ribosomal protein S6 [Bacillus mycoides DSM 2048]
gi|229136299|ref|ZP_04265046.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST196]
gi|229170177|ref|ZP_04297863.1| 30S ribosomal protein S6 [Bacillus cereus AH621]
gi|228613278|gb|EEK70417.1| 30S ribosomal protein S6 [Bacillus cereus AH621]
gi|228647171|gb|EEL03259.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST196]
gi|228746651|gb|EEL96540.1| 30S ribosomal protein S6 [Bacillus mycoides DSM 2048]
Length = 113
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 78 MILNVNSNSEAINEFDRLAKINEDILRHIVV 108
>gi|332665255|ref|YP_004448043.1| 30S ribosomal protein S6 [Haliscomenobacter hydrossis DSM 1100]
gi|332334069|gb|AEE51170.1| 30S ribosomal protein S6 [Haliscomenobacter hydrossis DSM 1100]
Length = 160
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M+ YE F++ ++S++IK T Y L++ G E+ +NE+G+R +A+ I +++ AY
Sbjct: 1 MRNYEVTFIVDPVLASEEIKATAQTYVDLLKSKGCEIVHINEMGLRQLAFAIGKRHSGAY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
Y A + I++ + R DE ++R LT+ +D +
Sbjct: 61 YCVEFKAVDGSMINDFELAFRRDERIIRFLTVALDKY 97
>gi|318043053|ref|ZP_07975009.1| 30S ribosomal protein S6 [Synechococcus sp. CB0101]
Length = 122
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI ++++ + +Y+ L+ E G EV G R +AY I K+++ YV +
Sbjct: 6 YETMYILRPDIPEEEVETHVTKYRDLVTEAGAEVLDCQMRGKRRLAYPIAKHKEGIYVQL 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ +++ MRI E+V+R LT+ D +P
Sbjct: 66 AHNGDGQQVATLEKAMRISEDVIRYLTVKQDGPLPAP 102
>gi|187777388|ref|ZP_02993861.1| hypothetical protein CLOSPO_00944 [Clostridium sporogenes ATCC
15579]
gi|187774316|gb|EDU38118.1| hypothetical protein CLOSPO_00944 [Clostridium sporogenes ATCC
15579]
Length = 94
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + E+ R RI ++V+R + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDSVIRHMII 91
>gi|111020421|ref|YP_703393.1| 30S ribosomal protein S6 [Rhodococcus jostii RHA1]
gi|226362639|ref|YP_002780417.1| 30S ribosomal protein S6 [Rhodococcus opacus B4]
gi|123340395|sp|Q0SB51|RS6_RHOSR RecName: Full=30S ribosomal protein S6
gi|254765449|sp|C1B719|RS6_RHOOB RecName: Full=30S ribosomal protein S6
gi|110819951|gb|ABG95235.1| 30S ribosomal protein S6 [Rhodococcus jostii RHA1]
gi|226241124|dbj|BAH51472.1| 30S ribosomal protein S6 [Rhodococcus opacus B4]
Length = 95
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG++ V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRQDGGKIDKVDVWGKRRLAYEILKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++I++ PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AVIDISATPATVAELDRQLGLNESVLRTKVL 91
>gi|57237952|ref|YP_179201.1| 30S ribosomal protein S6 [Campylobacter jejuni RM1221]
gi|86150512|ref|ZP_01068737.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|148926027|ref|ZP_01809713.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205355822|ref|ZP_03222591.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|73621847|sp|Q5HU34|RS6_CAMJR RecName: Full=30S ribosomal protein S6
gi|4376254|emb|CAA76675.1| ribosomal protein S6 [Campylobacter jejuni]
gi|57166756|gb|AAW35535.1| ribosomal protein S6 [Campylobacter jejuni RM1221]
gi|85839107|gb|EAQ56371.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|145845506|gb|EDK22598.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346256|gb|EDZ32890.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|307747972|gb|ADN91242.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni M1]
gi|315058511|gb|ADT72840.1| SSU ribosomal protein S6p [Campylobacter jejuni subsp. jejuni S3]
Length = 125
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +N E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNSAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +P I E++R +RI E V+R L +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIV 91
>gi|47568673|ref|ZP_00239370.1| ribosomal protein S6 [Bacillus cereus G9241]
gi|228988702|ref|ZP_04148787.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|47554661|gb|EAL13015.1| ribosomal protein S6 [Bacillus cereus G9241]
gi|228771014|gb|EEM19495.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 96
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ S AI+E R +I+E++LR + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIIV 91
>gi|95930452|ref|ZP_01313188.1| ribosomal protein S6 [Desulfuromonas acetoxidans DSM 684]
gi|95133492|gb|EAT15155.1| ribosomal protein S6 [Desulfuromonas acetoxidans DSM 684]
Length = 121
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ I + I +++ ++ + E+ V+E G + +AY ++K + Y
Sbjct: 1 MRTYETVLIVNPQIVGDEYTAVIEKFKGVLTDQNAEILKVDEWGTKRLAYPVKKCEQGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + I E +R+MR+D+ V++ TL++++
Sbjct: 61 VLINFNAENVVIKEFERRMRLDDAVIKFQTLILEN 95
>gi|313664919|ref|YP_004046790.1| ribosomal protein S6 [Mycoplasma leachii PG50]
gi|312949260|gb|ADR23856.1| ribosomal protein S6 [Mycoplasma leachii PG50]
Length = 137
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +++L QD+ + K+ + + ++ E GG++ N+LG+ Y I +K +Y
Sbjct: 2 IKKYEVMYILDQDL--KDTKELVAKLDGILSE-GGQILESNDLGLLDFTYEINHKKKGFY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL---LVDSHEQSPTLT------IQRHDRDD 111
+ + + AI E +R +ID+NV+R+L L + ++EQS L+ + R+
Sbjct: 59 HIVIVQATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKFEEEQREK 118
Query: 112 RNDRFP 117
+N R P
Sbjct: 119 KNFRKP 124
>gi|307151356|ref|YP_003886740.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 7822]
gi|306981584|gb|ADN13465.1| ribosomal protein S6 [Cyanothece sp. PCC 7822]
Length = 143
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D+ +Q++ I +Y+ + E+ E + LG R +AY I+K +YV M
Sbjct: 5 YEMMYIMRPDLLDEQVQQQINKYRDFLSEHKAEEIQIKNLGKRRLAYPIKKYTDGFYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + ++R MR+ + V+R LT+
Sbjct: 65 NYKGDGKQVAPIERAMRLSDEVIRYLTI 92
>gi|332672268|ref|YP_004455276.1| 30S ribosomal protein S6 [Cellulomonas fimi ATCC 484]
gi|332341306|gb|AEE47889.1| ribosomal protein S6 [Cellulomonas fimi ATCC 484]
Length = 97
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +I + + ++ +Y S+++ +GG V V+ G R +AY I+K + Y +
Sbjct: 6 YEIMIILDPEIEERTVAPSLDKYLSVVKTDGGTVDKVDIWGRRRLAYDIKKKSEGIYAVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + PA E+ R++ ++E VLR+ L D+
Sbjct: 66 DFTAEPATAKELDRQLGLNEVVLRTKVLRADA 97
>gi|160890913|ref|ZP_02071916.1| hypothetical protein BACUNI_03358 [Bacteroides uniformis ATCC
8492]
gi|167764866|ref|ZP_02436987.1| hypothetical protein BACSTE_03258 [Bacteroides stercoris ATCC
43183]
gi|270295894|ref|ZP_06202094.1| 30S ribosomal protein S6 [Bacteroides sp. D20]
gi|156859912|gb|EDO53343.1| hypothetical protein BACUNI_03358 [Bacteroides uniformis ATCC
8492]
gi|167697535|gb|EDS14114.1| hypothetical protein BACSTE_03258 [Bacteroides stercoris ATCC
43183]
gi|270273298|gb|EFA19160.1| 30S ribosomal protein S6 [Bacteroides sp. D20]
Length = 114
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT D +
Sbjct: 59 FYQLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKY 96
>gi|326329085|ref|ZP_08195414.1| ribosomal protein S6 [Nocardioidaceae bacterium Broad-1]
gi|325953167|gb|EGD45178.1| ribosomal protein S6 [Nocardioidaceae bacterium Broad-1]
Length = 95
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + T+ ++ ++ +GG V V+ G R +AY + KN + Y
Sbjct: 1 MRAYEVMVILEPSLDERTVAPTLDKFLKVVTNDGGTVENVDVWGRRRLAYEVNKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N+ + P + E+ R++ ++E +LR+
Sbjct: 61 AVVNLTAEPKTVLELDRQLGLNEQILRT 88
>gi|83319327|ref|YP_424022.1| 30S ribosomal protein S6 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|91207919|sp|Q2ST91|RS6_MYCCT RecName: Full=30S ribosomal protein S6
gi|83283213|gb|ABC01145.1| 30S ribosomal protein S6 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 137
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +++L QD+ + K+ + + ++ E GG++ N+LG+ Y I +K +Y
Sbjct: 2 IKKYEVMYILDQDL--KDTKELVAKLDGILSE-GGQILESNDLGLLDFTYEINHKKKGFY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL---LVDSHEQSPTLT------IQRHDRDD 111
+ + + AI E +R +ID+NV+R+L L + ++EQS L+ + R+
Sbjct: 59 HIVIVQATTQAIKEFERIAKIDKNVVRTLVLNTQNIQNYEQSVVLSKTDMTKFEEEQREK 118
Query: 112 RNDRFP 117
+N R P
Sbjct: 119 KNFRKP 124
>gi|153941470|ref|YP_001392984.1| 30S ribosomal protein S6 [Clostridium botulinum F str. Langeland]
gi|168181095|ref|ZP_02615759.1| ribosomal protein S6 [Clostridium botulinum NCTC 2916]
gi|170755574|ref|YP_001783263.1| 30S ribosomal protein S6 [Clostridium botulinum B1 str. Okra]
gi|226951080|ref|YP_002806171.1| ribosomal protein S6 [Clostridium botulinum A2 str. Kyoto]
gi|166226823|sp|A7GJM4|RS6_CLOBL RecName: Full=30S ribosomal protein S6
gi|226703442|sp|B1IHQ4|RS6_CLOBK RecName: Full=30S ribosomal protein S6
gi|254765230|sp|C1FP16|RS6_CLOBJ RecName: Full=30S ribosomal protein S6
gi|152937366|gb|ABS42864.1| 30S ribosomal protein S6 [Clostridium botulinum F str. Langeland]
gi|169120786|gb|ACA44622.1| 30S ribosomal protein S6 [Clostridium botulinum B1 str. Okra]
gi|182668139|gb|EDT80118.1| ribosomal protein S6 [Clostridium botulinum NCTC 2916]
gi|226843146|gb|ACO85812.1| ribosomal protein S6 [Clostridium botulinum A2 str. Kyoto]
gi|295320959|gb|ADG01337.1| 30S ribosomal protein S6 [Clostridium botulinum F str. 230613]
gi|322807952|emb|CBZ05527.1| SSU ribosomal protein S6p [Clostridium botulinum H04402 065]
Length = 94
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
MN + E+ R RI + V+R + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMII 91
>gi|296330020|ref|ZP_06872504.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676744|ref|YP_003868416.1| ribosomal protein S6 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153059|gb|EFG93924.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414988|gb|ADM40107.1| ribosomal protein S6 [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 95
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEVMYIIRPNIDEESKKAVIERFSNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ + AA+ E R +I ++++R + +
Sbjct: 61 QIVNVQADAAAVQEFDRLAKISDDIIRHIVV 91
>gi|328906634|gb|EGG26409.1| 30S ribosomal protein S6 [Propionibacterium sp. P08]
Length = 96
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIVDPTVEERQVDSLMEKYLKVITDEKGTVGNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +N PA I EM R + IDE ++R+
Sbjct: 61 VVVNATCEPATIQEMDRLLAIDEKIMRT 88
>gi|157694462|ref|YP_001488924.1| 30S ribosomal protein S6 [Bacillus pumilus SAFR-032]
gi|194016480|ref|ZP_03055094.1| ribosomal protein S6 [Bacillus pumilus ATCC 7061]
gi|167011243|sp|A8FJE7|RS6_BACP2 RecName: Full=30S ribosomal protein S6
gi|157683220|gb|ABV64364.1| ribosomal protein S6 [Bacillus pumilus SAFR-032]
gi|194011953|gb|EDW21521.1| ribosomal protein S6 [Bacillus pumilus ATCC 7061]
Length = 95
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K I ++ +++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYEVMYIIRPTVDDEAKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHIVV 91
>gi|283850176|ref|ZP_06367465.1| ribosomal protein S6 [Desulfovibrio sp. FW1012B]
gi|283574202|gb|EFC22173.1| ribosomal protein S6 [Desulfovibrio sp. FW1012B]
Length = 102
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL ++++ ++ I + +++ + LV+E GMR +AY ++K + ++
Sbjct: 1 MRKYEALLLLSPELATDNRQEIIENLKGVLERQSATILLVDEWGMRDLAYPVQKKSRGHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
A+P AI E +R +RI + +++ +T+
Sbjct: 61 TRFEFAAPATAIAEFERIVRITDGIMKFITV 91
>gi|332520812|ref|ZP_08397272.1| ribosomal protein S6 [Lacinutrix algicola 5H-3-7-4]
gi|332043342|gb|EGI79538.1| ribosomal protein S6 [Lacinutrix algicola 5H-3-7-4]
Length = 112
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQIKETVKKYEDFLTERGAKMVAKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I ++ + R DE +R LT+ +D H S
Sbjct: 61 HLFEYTIDGEHITPLEVEFRRDERFMRYLTVALDKHAIS 99
>gi|189463979|ref|ZP_03012764.1| hypothetical protein BACINT_00314 [Bacteroides intestinalis DSM
17393]
gi|224536024|ref|ZP_03676563.1| hypothetical protein BACCELL_00888 [Bacteroides cellulosilyticus
DSM 14838]
gi|189438552|gb|EDV07537.1| hypothetical protein BACINT_00314 [Bacteroides intestinalis DSM
17393]
gi|224522349|gb|EEF91454.1| hypothetical protein BACCELL_00888 [Bacteroides cellulosilyticus
DSM 14838]
Length = 114
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ VNE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--VNEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P I +++ R DE V+R LT D +
Sbjct: 59 FYQLIEFNADPTVIDKLELNFRRDERVIRFLTFKQDKY 96
>gi|145221468|ref|YP_001132146.1| 30S ribosomal protein S6 [Mycobacterium gilvum PYR-GCK]
gi|315446780|ref|YP_004079659.1| 30S ribosomal protein S6P [Mycobacterium sp. Spyr1]
gi|145213954|gb|ABP43358.1| SSU ribosomal protein S6P [Mycobacterium gilvum PYR-GCK]
gi|315265083|gb|ADU01825.1| SSU ribosomal protein S6P [Mycobacterium sp. Spyr1]
Length = 96
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + + H
Sbjct: 61 AIIDVKAEPATVSELDRQLNLNESVLRTKVMRTEKH 96
>gi|325285227|ref|YP_004261017.1| 30S ribosomal protein S6 [Cellulophaga lytica DSM 7489]
gi|324320681|gb|ADY28146.1| 30S ribosomal protein S6 [Cellulophaga lytica DSM 7489]
Length = 112
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + + G ++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDVQIEETVKKFEDFLIKKGSKMVAKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P I+ + + R DE V+R LT+ +D H S
Sbjct: 61 HLFEFTAPGDVINGYELEFRRDERVMRFLTVKLDKHAIS 99
>gi|332704306|ref|ZP_08424394.1| 30S ribosomal protein S6 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554455|gb|EGJ51499.1| 30S ribosomal protein S6 [Desulfovibrio africanus str. Walvis
Bay]
Length = 102
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L +++++ K+ + +++ G+ +++E G R +AY + K + +Y
Sbjct: 1 MRKYETLLLFSPELTTENRKEILDNLGAIVAREQGQTLMLDEWGSRELAYAVNKFTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + A P I E++R +RI + +L+ +T+ +D + Q+
Sbjct: 61 VRLEYAGPSPLIAELERNIRITDGILKFVTVKLDENFQA 99
>gi|304438790|ref|ZP_07398717.1| 30S ribosomal protein S6 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372713|gb|EFM26292.1| 30S ribosomal protein S6 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 94
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V + D+ + T + +++I E G++ V+E GMR +AY I +AYY
Sbjct: 1 MRKYEVVLMFYPDVEEETRVKTFDRLKNII-ETHGKIESVDEWGMRKLAYEIEYYTEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N + PA + E R +I + V+R + + ++
Sbjct: 60 VLVNFEAEPATVKEFDRVAKILDPVMRHMVVAIE 93
>gi|268679498|ref|YP_003303929.1| ribosomal protein S6 [Sulfurospirillum deleyianum DSM 6946]
gi|268617529|gb|ACZ11894.1| ribosomal protein S6 [Sulfurospirillum deleyianum DSM 6946]
Length = 132
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 54/91 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +++ ++ ++++ + + ++++NG + E+G R +AY+I K + Y
Sbjct: 1 MRHYELLVVVKPTLTVEELQAKLSYLKEILEKNGAVIAATLEMGTRKLAYQIDKFERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +P AAI E++R +RI E +R +T+
Sbjct: 61 VVFYFTAPTAAIAEVERLIRITEEFIRFMTV 91
>gi|303249179|ref|ZP_07335417.1| ribosomal protein S6 [Desulfovibrio fructosovorans JJ]
gi|302489402|gb|EFL49351.1| ribosomal protein S6 [Desulfovibrio fructosovorans JJ]
Length = 102
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL +++++ ++ I Q +++ + V+E GMR +AY + K + +Y
Sbjct: 1 MRKYEALLLLSPELAAENRQEIIENLQGVLERQQATMLTVDEWGMRELAYPVEKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ A+P AI E +R +RI + +++ +T+
Sbjct: 61 TRLEFAAPAPAIAEFERIVRITDGIMKFITV 91
>gi|317486568|ref|ZP_07945389.1| ribosomal protein S6 [Bilophila wadsworthia 3_1_6]
gi|316922168|gb|EFV43433.1| ribosomal protein S6 [Bilophila wadsworthia 3_1_6]
Length = 100
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + +G + +I+ GG + GMR +AY +RK + Y+
Sbjct: 1 MRKFETLLLLSPELAADAREALLGTFTGVIERAGGRFT-ADHWGMRDLAYPVRKQMRGYF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQ 98
V + +P + E++R +RI + + LT+ L D+ E+
Sbjct: 60 VRLEYVAPGDTVAELERIIRISDGAFKFLTVKLADAAEE 98
>gi|237712432|ref|ZP_04542913.1| 30S ribosomal protein S6 [Bacteroides sp. 9_1_42FAA]
gi|229453753|gb|EEO59474.1| 30S ribosomal protein S6 [Bacteroides sp. 9_1_42FAA]
Length = 114
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + +++ ++ G E+ +NE G++ +AY I+K
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEI--INEENWGLKKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+Y + + P + +++ R DE V+R LT +D +
Sbjct: 59 FYQLIEFKAEPQVVKKLEINFRRDERVIRFLTFKMDKY 96
>gi|228473934|ref|ZP_04058675.1| ribosomal protein S6 [Capnocytophaga gingivalis ATCC 33624]
gi|228274448|gb|EEK13289.1| ribosomal protein S6 [Capnocytophaga gingivalis ATCC 33624]
Length = 113
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEAQIKEAVEKFENFLTSKGAEMVAKEDWGLKKLAYSIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+P I + + R DE V+R LT+
Sbjct: 61 HLFEFKAPGDIIESFEVEFRRDERVMRYLTV 91
>gi|126697235|ref|YP_001092121.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9301]
gi|126544278|gb|ABO18520.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9301]
Length = 153
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 8 YETMYILRPDIAEDEVTTYIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++++ MR+ E+V+R +T+
Sbjct: 68 SHQGDGQHIFKIEKAMRLSEDVIRYMTV 95
>gi|324998550|ref|ZP_08119662.1| 30S ribosomal protein S6 [Pseudonocardia sp. P1]
Length = 98
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 52/85 (61%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + ++ ++ Q+ ++++ +GG + + G R +AY I+K +A Y + IA
Sbjct: 1 MVILDGSLDERTVQPSLEQFLTVVKSDGGSIEKIEVWGKRRLAYEIKKQGEAIYAVVEIA 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AEPATVAELDRQLGLNESVLRTKVL 85
>gi|242085884|ref|XP_002443367.1| hypothetical protein SORBIDRAFT_08g018320 [Sorghum bicolor]
gi|241944060|gb|EES17205.1| hypothetical protein SORBIDRAFT_08g018320 [Sorghum bicolor]
Length = 308
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D +++++ + + Q I+E G + VN G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHED-RVEEVENVVSKVQDFIREKKGRIWRVNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE V+R L +
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERVIRHLVM 212
>gi|78188077|ref|YP_378415.1| 30S ribosomal protein S6 [Chlorobium chlorochromatii CaD3]
gi|91207907|sp|Q3ANR5|RS6_CHLCH RecName: Full=30S ribosomal protein S6
gi|78170276|gb|ABB27372.1| SSU ribosomal protein S6P [Chlorobium chlorochromatii CaD3]
Length = 132
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + + T+ Q +I E GG + V +LG R AY I+K YYV
Sbjct: 5 KLYECTAIIDGGLQDEAVAATLAMVQRVITEKGGTINSVLDLGRRKTAYPIKKKSMGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + I E++R +R +E +LR L +
Sbjct: 65 HIEFNAAAPVIAEIERVLRYEEELLRYLII 94
>gi|67921027|ref|ZP_00514546.1| Ribosomal protein S6 [Crocosphaera watsonii WH 8501]
gi|67857144|gb|EAM52384.1| Ribosomal protein S6 [Crocosphaera watsonii WH 8501]
Length = 111
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+LR D+S Q+ + Y+ + N V G R +AY I+K YV
Sbjct: 5 YEMIFILRPDLSEDQVNQALNSYKEFLTTNNATNLEVKIWGKRRLAYPIQKKVDGIYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + I ++R MR+ E V+R LT+ +D+
Sbjct: 65 NYEADGTQIAPLERMMRLGEEVMRYLTIRLDT 96
>gi|229822655|ref|YP_002884181.1| ribosomal protein S6 [Beutenbergia cavernae DSM 12333]
gi|259495326|sp|C5C661|RS6_BEUC1 RecName: Full=30S ribosomal protein S6
gi|229568568|gb|ACQ82419.1| ribosomal protein S6 [Beutenbergia cavernae DSM 12333]
Length = 96
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ ++ S+I+ GG V V+ G R +AY I K + Y
Sbjct: 1 MRNYELMIILDPEVDERTVAPSLDKFLSVIKTGGGSVDNVDIWGKRRLAYEINKRAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N+ + P E+ R++ ++E VLR+ + D+H
Sbjct: 61 AVVNLTATPDLAKELDRQLGLNEAVLRTKLIRPDAH 96
>gi|291285955|ref|YP_003502771.1| 30S ribosomal protein S6 [Denitrovibrio acetiphilus DSM 12809]
gi|290883115|gb|ADD66815.1| ribosomal protein S6 [Denitrovibrio acetiphilus DSM 12809]
Length = 180
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++R D+ +++ + Y+ I+++GG++ V G +T+AY I R+ Y
Sbjct: 1 MNTYETVFIVRPDLPQEELDKELEFYKGNIEQHGGKILKVEPWGKQTMAYDIENFREGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + E+ + R +EN+LR + + +D
Sbjct: 61 FLIQFEASTEYHDELNLRFRYNENILRFVVVAID 94
>gi|289209096|ref|YP_003461162.1| ribosomal protein S6 [Thioalkalivibrio sp. K90mix]
gi|288944727|gb|ADC72426.1| ribosomal protein S6 [Thioalkalivibrio sp. K90mix]
Length = 134
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ L++ + G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYKGLVEGHEGKIHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQ--------RHDRD 110
V MNI + A+ E+ R ++ VLR L + ++ E SP Q R +RD
Sbjct: 60 VLMNIEASEEALEELVSAFRFNDAVLRHLAMRMEEAVTETSPLAKGQEEEGAKGRRRERD 119
Query: 111 DRNDRFPRD 119
D + D
Sbjct: 120 DEGGQAASD 128
>gi|30248222|ref|NP_840292.1| 30S ribosomal protein S6 [Nitrosomonas europaea ATCC 19718]
gi|61215748|sp|Q82XQ6|RS6_NITEU RecName: Full=30S ribosomal protein S6
gi|30180107|emb|CAD84109.1| Ribosomal protein S6 [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ +Y +++ G++ + + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVSAMTERYSNIVTGRSGKIHRLEDWGRRQLTYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MNI +++E++ + ++ +LR L + ++ +P+ +Q
Sbjct: 60 VLMNIECDQESLNELEHSFKFNDAILRHLVIRMNGPITTPSPMMQ 104
>gi|189499148|ref|YP_001958618.1| 30S ribosomal protein S6 [Chlorobium phaeobacteroides BS1]
gi|226703439|sp|B3EKF9|RS6_CHLPB RecName: Full=30S ribosomal protein S6
gi|189494589|gb|ACE03137.1| ribosomal protein S6 [Chlorobium phaeobacteroides BS1]
Length = 134
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I T+ + +++I +NGG++ V E+G RT+AY I K Y
Sbjct: 5 KLYECTVIINGGLEDDAIAATMDEVRNVIAKNGGDIENVLEVGRRTMAYPIGKQTIGSYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ P+ + ++ R +EN+LR L + H +P L +++
Sbjct: 65 HIEFRGEPSGLAAIETAFRYNENILRFLIV----HLSTPLLEMRK 105
>gi|238750084|ref|ZP_04611587.1| 30S ribosomal subunit protein S6 [Yersinia rohdei ATCC 43380]
gi|238711628|gb|EEQ03843.1| 30S ribosomal subunit protein S6 [Yersinia rohdei ATCC 43380]
Length = 110
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y + I G + + + G R +AY I K KA+YV +N+ +P AI E++ R +
Sbjct: 2 IERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQEAIDELETNFRFN 61
Query: 83 ENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ V+RS+ + V E SP + + +R +R+D F + N D + SEE
Sbjct: 62 DAVIRSMVMRVKHAVTEASP-MVKAKDERRERHD-FASEANDDSEAGDSEE 110
>gi|322420135|ref|YP_004199358.1| 30S ribosomal protein S6 [Geobacter sp. M18]
gi|320126522|gb|ADW14082.1| ribosomal protein S6 [Geobacter sp. M18]
Length = 133
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 57/100 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q +I G+ + + + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVIASMNGDFKRLEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
++ + I E++R++R+D+ V+R ++ ++ +P
Sbjct: 63 YLRFDADAPLIAELERRLRLDDKVIRYQSVKLEQEVVAPA 102
>gi|210624076|ref|ZP_03294176.1| hypothetical protein CLOHIR_02128 [Clostridium hiranonis DSM
13275]
gi|210153209|gb|EEA84215.1| hypothetical protein CLOHIR_02128 [Clostridium hiranonis DSM
13275]
Length = 94
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++++ + + + + + +I+ NGGEV V+ G R +AY I K + +Y
Sbjct: 1 MRDYELVYVVKPVLDEETREGVQNKIKEIIETNGGEVTKVDAWGNRKLAYPIAKFTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + E+ R ++I+ENV+R + ++ D
Sbjct: 61 TLVNFKASVELPKELDRNLKINENVIRHMVVVCD 94
>gi|30265492|ref|NP_847869.1| 30S ribosomal protein S6 [Bacillus anthracis str. Ames]
gi|47531060|ref|YP_022409.1| 30S ribosomal protein S6 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188311|ref|YP_031564.1| 30S ribosomal protein S6 [Bacillus anthracis str. Sterne]
gi|49481194|ref|YP_039464.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145282|ref|YP_086739.1| 30S ribosomal protein S6 [Bacillus cereus E33L]
gi|165873021|ref|ZP_02217642.1| ribosomal protein S6 [Bacillus anthracis str. A0488]
gi|167635107|ref|ZP_02393424.1| ribosomal protein S6 [Bacillus anthracis str. A0442]
gi|167641752|ref|ZP_02399995.1| ribosomal protein S6 [Bacillus anthracis str. A0193]
gi|170689457|ref|ZP_02880647.1| ribosomal protein S6 [Bacillus anthracis str. A0465]
gi|170707585|ref|ZP_02898038.1| ribosomal protein S6 [Bacillus anthracis str. A0389]
gi|177655277|ref|ZP_02936831.1| ribosomal protein S6 [Bacillus anthracis str. A0174]
gi|190569298|ref|ZP_03022192.1| ribosomal protein S6 [Bacillus anthracis Tsiankovskii-I]
gi|196036113|ref|ZP_03103513.1| ribosomal protein S6 [Bacillus cereus W]
gi|196041953|ref|ZP_03109240.1| ribosomal protein S6 [Bacillus cereus NVH0597-99]
gi|196045561|ref|ZP_03112792.1| ribosomal protein S6 [Bacillus cereus 03BB108]
gi|206975820|ref|ZP_03236731.1| 30S ribosomal protein S6 [Bacillus cereus H3081.97]
gi|217962967|ref|YP_002341545.1| 30S ribosomal protein S6 [Bacillus cereus AH187]
gi|218906666|ref|YP_002454500.1| ribosomal protein S6 [Bacillus cereus AH820]
gi|222098951|ref|YP_002533009.1| 30S ribosomal protein s6 [Bacillus cereus Q1]
gi|225867455|ref|YP_002752833.1| 30S ribosomal protein S6 [Bacillus cereus 03BB102]
gi|227818243|ref|YP_002818252.1| 30S ribosomal protein S6 [Bacillus anthracis str. CDC 684]
gi|228918086|ref|ZP_04081614.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228949196|ref|ZP_04111464.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094585|ref|ZP_04225652.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-42]
gi|229124977|ref|ZP_04254151.1| 30S ribosomal protein S6 [Bacillus cereus 95/8201]
gi|229142223|ref|ZP_04270747.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST26]
gi|229187703|ref|ZP_04314839.1| 30S ribosomal protein S6 [Bacillus cereus BGSC 6E1]
gi|229602976|ref|YP_002869683.1| 30S ribosomal protein S6 [Bacillus anthracis str. A0248]
gi|254687085|ref|ZP_05150943.1| 30S ribosomal protein S6 [Bacillus anthracis str. CNEVA-9066]
gi|254724132|ref|ZP_05185917.1| 30S ribosomal protein S6 [Bacillus anthracis str. A1055]
gi|254735149|ref|ZP_05192859.1| 30S ribosomal protein S6 [Bacillus anthracis str. Western North
America USA6153]
gi|254742142|ref|ZP_05199829.1| 30S ribosomal protein S6 [Bacillus anthracis str. Kruger B]
gi|254755948|ref|ZP_05207980.1| 30S ribosomal protein S6 [Bacillus anthracis str. Vollum]
gi|254761372|ref|ZP_05213394.1| 30S ribosomal protein S6 [Bacillus anthracis str. Australia 94]
gi|300118824|ref|ZP_07056544.1| 30S ribosomal protein S6 [Bacillus cereus SJ1]
gi|301056948|ref|YP_003795159.1| 30S ribosomal protein S6 [Bacillus anthracis CI]
gi|61215455|sp|Q630C8|RS6_BACCZ RecName: Full=30S ribosomal protein S6
gi|61215550|sp|Q6HAG2|RS6_BACHK RecName: Full=30S ribosomal protein S6
gi|61215741|sp|Q81JI2|RS6_BACAN RecName: Full=30S ribosomal protein S6
gi|226703417|sp|B7JIK1|RS6_BACC0 RecName: Full=30S ribosomal protein S6
gi|226703420|sp|B7HZG1|RS6_BACC7 RecName: Full=30S ribosomal protein S6
gi|254765218|sp|C3P3E5|RS6_BACAA RecName: Full=30S ribosomal protein S6
gi|254765219|sp|C3LGT1|RS6_BACAC RecName: Full=30S ribosomal protein S6
gi|254765220|sp|C1ER67|RS6_BACC3 RecName: Full=30S ribosomal protein S6
gi|254765221|sp|B9IT32|RS6_BACCQ RecName: Full=30S ribosomal protein S6
gi|30260170|gb|AAP29355.1| 30S ribosomal protein S6 [Bacillus anthracis str. Ames]
gi|47506208|gb|AAT34884.1| ribosomal protein S6 [Bacillus anthracis str. 'Ames Ancestor']
gi|49182238|gb|AAT57614.1| ribosomal protein S6 [Bacillus anthracis str. Sterne]
gi|49332750|gb|AAT63396.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978751|gb|AAU20301.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus cereus
E33L]
gi|164711233|gb|EDR16789.1| ribosomal protein S6 [Bacillus anthracis str. A0488]
gi|167510306|gb|EDR85709.1| ribosomal protein S6 [Bacillus anthracis str. A0193]
gi|167529581|gb|EDR92331.1| ribosomal protein S6 [Bacillus anthracis str. A0442]
gi|170127581|gb|EDS96455.1| ribosomal protein S6 [Bacillus anthracis str. A0389]
gi|170666559|gb|EDT17332.1| ribosomal protein S6 [Bacillus anthracis str. A0465]
gi|172080204|gb|EDT65296.1| ribosomal protein S6 [Bacillus anthracis str. A0174]
gi|190559605|gb|EDV13596.1| ribosomal protein S6 [Bacillus anthracis Tsiankovskii-I]
gi|195991280|gb|EDX55248.1| ribosomal protein S6 [Bacillus cereus W]
gi|196023768|gb|EDX62444.1| ribosomal protein S6 [Bacillus cereus 03BB108]
gi|196027208|gb|EDX65828.1| ribosomal protein S6 [Bacillus cereus NVH0597-99]
gi|206745914|gb|EDZ57310.1| 30S ribosomal protein S6 [Bacillus cereus H3081.97]
gi|217064055|gb|ACJ78305.1| ribosomal protein S6 [Bacillus cereus AH187]
gi|218538036|gb|ACK90434.1| ribosomal protein S6 [Bacillus cereus AH820]
gi|221243010|gb|ACM15720.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus cereus
Q1]
gi|225786761|gb|ACO26978.1| 30S ribosomal protein S6 [Bacillus cereus 03BB102]
gi|227005886|gb|ACP15629.1| 30S ribosomal protein S6 [Bacillus anthracis str. CDC 684]
gi|228595771|gb|EEK53455.1| 30S ribosomal protein S6 [Bacillus cereus BGSC 6E1]
gi|228641241|gb|EEK97548.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST26]
gi|228658478|gb|EEL14144.1| 30S ribosomal protein S6 [Bacillus cereus 95/8201]
gi|228688832|gb|EEL42663.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-42]
gi|228810479|gb|EEM56832.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228841566|gb|EEM86682.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229267384|gb|ACQ49021.1| 30S ribosomal protein S6 [Bacillus anthracis str. A0248]
gi|298723792|gb|EFI64514.1| 30S ribosomal protein S6 [Bacillus cereus SJ1]
gi|300379117|gb|ADK08021.1| 30S ribosomal protein S6 [Bacillus cereus biovar anthracis str.
CI]
Length = 96
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ + AI+E R +I+E++LR + +
Sbjct: 61 MILNVNANAEAINEFDRLAKINEDILRHIVV 91
>gi|146296357|ref|YP_001180128.1| ribosomal protein S6 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145409933|gb|ABP66937.1| SSU ribosomal protein S6P [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 124
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + + I ++++LI NG ++ V E G R +AY+I K+ + YYV M
Sbjct: 34 YETVFIISPTLDDEARANLIEKFKNLISSNG-QLLTVEEWGKRRLAYKIDKHAEGYYVLM 92
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R L +
Sbjct: 93 QFISKPEFPRELERVYRITDGVIRFLIV 120
>gi|65317455|ref|ZP_00390414.1| COG0360: Ribosomal protein S6 [Bacillus anthracis str. A2012]
gi|118480502|ref|YP_897653.1| 30S ribosomal protein S6 [Bacillus thuringiensis str. Al Hakam]
gi|118419727|gb|ABK88146.1| SSU ribosomal protein S6P [Bacillus thuringiensis str. Al Hakam]
Length = 113
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ + AI+E R +I+E++LR + +
Sbjct: 78 MILNVNANAEAINEFDRLAKINEDILRHIVV 108
>gi|325130388|gb|EGC53153.1| ribosomal protein S6 [Neisseria meningitidis OX99.30304]
Length = 102
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R +
Sbjct: 2 VERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFN 61
Query: 83 ENVLRSLTLLVDSH--EQSPTL 102
+ VLR LT+ E SP L
Sbjct: 62 DAVLRHLTIKTKHAVTEASPML 83
>gi|253700101|ref|YP_003021290.1| 30S ribosomal protein S6 [Geobacter sp. M21]
gi|259495335|sp|C6E503|RS6_GEOSM RecName: Full=30S ribosomal protein S6
gi|251774951|gb|ACT17532.1| ribosomal protein S6 [Geobacter sp. M21]
Length = 134
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 57/100 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q ++ G+ + + + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVVAGMNGDFKRLEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
++ I E++R++R+D+ V+R ++ +++ +P
Sbjct: 63 YLRFDGDSGLIAELERRLRLDDKVIRYQSVKLETEVVAPA 102
>gi|325198474|gb|ADY93930.1| ribosomal protein S6 [Neisseria meningitidis G2136]
gi|325200052|gb|ADY95507.1| ribosomal protein S6 [Neisseria meningitidis H44/76]
Length = 102
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R +
Sbjct: 2 VERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFN 61
Query: 83 ENVLRSLTLLVDSH--EQSPTL 102
+ VLR LT+ E SP L
Sbjct: 62 DAVLRHLTIKTKHAVTEASPML 83
>gi|88858914|ref|ZP_01133555.1| 30S ribosomal protein S6 [Pseudoalteromonas tunicata D2]
gi|88819140|gb|EAR28954.1| 30S ribosomal protein S6 [Pseudoalteromonas tunicata D2]
Length = 105
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y I E GG + + + G R +AY I K KA+YV MN+ + I+E+
Sbjct: 7 SEQVPGMIERYTGSITEAGGTIHRLEDWGRRQLAYPIDKLHKAHYVLMNVEATSEVINEL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH--EQSP 100
+ R ++ VLR+L + S E SP
Sbjct: 67 ETSFRYNDAVLRNLVMRTKSAVTEASP 93
>gi|325204322|gb|ADY99775.1| ribosomal protein S6 [Neisseria meningitidis M01-240355]
Length = 102
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R +
Sbjct: 2 VERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFN 61
Query: 83 ENVLRSLTLLVDSH--EQSPTL 102
+ VLR LT+ E SP L
Sbjct: 62 DAVLRHLTIKTKHAVTEASPML 83
>gi|260101872|ref|ZP_05752109.1| 30S ribosomal protein S6 [Lactobacillus helveticus DSM 20075]
gi|260084300|gb|EEW68420.1| 30S ribosomal protein S6 [Lactobacillus helveticus DSM 20075]
Length = 98
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ + K + Y +I +NGG + + G R AY+I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEESKKALVENYDKVIADNGGTMVESKDWGKRRFAYKIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFGRLSKIDNMILRSMTVKLD 97
>gi|311742124|ref|ZP_07715934.1| 30S ribosomal protein S6 [Aeromicrobium marinum DSM 15272]
gi|311314617|gb|EFQ84524.1| 30S ribosomal protein S6 [Aeromicrobium marinum DSM 15272]
Length = 98
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ Y ++I+ +GG V V+ G R AY I K + Y +
Sbjct: 6 YEVMVILDASLDERTVEPSLDTYLNVIRADGGSVDKVDVWGKRRFAYEINKQTEGIYAVL 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
++ + PAA+ E+ R++ ++E+V+R+
Sbjct: 66 DLQATPAAVKELDRQLGLNESVVRT 90
>gi|296131517|ref|YP_003638767.1| ribosomal protein S6 [Cellulomonas flavigena DSM 20109]
gi|296023332|gb|ADG76568.1| ribosomal protein S6 [Cellulomonas flavigena DSM 20109]
Length = 97
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +I + + ++ +Y S+++ +GG V V+ G R +AY I+K + Y +
Sbjct: 6 YEIMIILDPEIEERTVAPSLDKYLSVVKTDGGTVDKVDVWGRRRLAYDIKKKAEGIYAVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + PA E+ R++ ++E VLR+ L
Sbjct: 66 DFTASPATAKELDRQLGLNEVVLRTKVL 93
>gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202]
gi|282854510|ref|ZP_06263846.1| ribosomal protein S6 [Propionibacterium acnes J139]
gi|289425921|ref|ZP_06427673.1| ribosomal protein S6 [Propionibacterium acnes SK187]
gi|289428181|ref|ZP_06429880.1| ribosomal protein S6 [Propionibacterium acnes J165]
gi|295131753|ref|YP_003582416.1| ribosomal protein S6 [Propionibacterium acnes SK137]
gi|61216184|sp|Q6A5M9|RS6_PROAC RecName: Full=30S ribosomal protein S6
gi|50841267|gb|AAT83934.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202]
gi|282582371|gb|EFB87752.1| ribosomal protein S6 [Propionibacterium acnes J139]
gi|289153697|gb|EFD02406.1| ribosomal protein S6 [Propionibacterium acnes SK187]
gi|289158661|gb|EFD06865.1| ribosomal protein S6 [Propionibacterium acnes J165]
gi|291375975|gb|ADD99829.1| ribosomal protein S6 [Propionibacterium acnes SK137]
gi|313765163|gb|EFS36527.1| ribosomal protein S6 [Propionibacterium acnes HL013PA1]
gi|313771569|gb|EFS37535.1| ribosomal protein S6 [Propionibacterium acnes HL074PA1]
gi|313794141|gb|EFS42161.1| ribosomal protein S6 [Propionibacterium acnes HL110PA1]
gi|313803264|gb|EFS44460.1| ribosomal protein S6 [Propionibacterium acnes HL110PA2]
gi|313808597|gb|EFS47057.1| ribosomal protein S6 [Propionibacterium acnes HL087PA2]
gi|313811967|gb|EFS49681.1| ribosomal protein S6 [Propionibacterium acnes HL083PA1]
gi|313813949|gb|EFS51663.1| ribosomal protein S6 [Propionibacterium acnes HL025PA1]
gi|313817113|gb|EFS54827.1| ribosomal protein S6 [Propionibacterium acnes HL059PA1]
gi|313819058|gb|EFS56772.1| ribosomal protein S6 [Propionibacterium acnes HL046PA2]
gi|313821663|gb|EFS59377.1| ribosomal protein S6 [Propionibacterium acnes HL036PA1]
gi|313823799|gb|EFS61513.1| ribosomal protein S6 [Propionibacterium acnes HL036PA2]
gi|313826903|gb|EFS64617.1| ribosomal protein S6 [Propionibacterium acnes HL063PA1]
gi|313829274|gb|EFS66988.1| ribosomal protein S6 [Propionibacterium acnes HL063PA2]
gi|313832400|gb|EFS70114.1| ribosomal protein S6 [Propionibacterium acnes HL007PA1]
gi|313834167|gb|EFS71881.1| ribosomal protein S6 [Propionibacterium acnes HL056PA1]
gi|313839205|gb|EFS76919.1| ribosomal protein S6 [Propionibacterium acnes HL086PA1]
gi|314916832|gb|EFS80663.1| ribosomal protein S6 [Propionibacterium acnes HL005PA4]
gi|314919009|gb|EFS82840.1| ribosomal protein S6 [Propionibacterium acnes HL050PA1]
gi|314921160|gb|EFS84991.1| ribosomal protein S6 [Propionibacterium acnes HL050PA3]
gi|314921992|gb|EFS85823.1| ribosomal protein S6 [Propionibacterium acnes HL001PA1]
gi|314926139|gb|EFS89970.1| ribosomal protein S6 [Propionibacterium acnes HL036PA3]
gi|314932493|gb|EFS96324.1| ribosomal protein S6 [Propionibacterium acnes HL067PA1]
gi|314956278|gb|EFT00650.1| ribosomal protein S6 [Propionibacterium acnes HL027PA1]
gi|314958672|gb|EFT02774.1| ribosomal protein S6 [Propionibacterium acnes HL002PA1]
gi|314960978|gb|EFT05079.1| ribosomal protein S6 [Propionibacterium acnes HL002PA2]
gi|314964038|gb|EFT08138.1| ribosomal protein S6 [Propionibacterium acnes HL082PA1]
gi|314965949|gb|EFT10048.1| ribosomal protein S6 [Propionibacterium acnes HL082PA2]
gi|314968802|gb|EFT12900.1| ribosomal protein S6 [Propionibacterium acnes HL037PA1]
gi|314975066|gb|EFT19161.1| ribosomal protein S6 [Propionibacterium acnes HL053PA1]
gi|314977477|gb|EFT21572.1| ribosomal protein S6 [Propionibacterium acnes HL045PA1]
gi|314979065|gb|EFT23159.1| ribosomal protein S6 [Propionibacterium acnes HL072PA2]
gi|314980728|gb|EFT24822.1| ribosomal protein S6 [Propionibacterium acnes HL110PA3]
gi|314985855|gb|EFT29947.1| ribosomal protein S6 [Propionibacterium acnes HL005PA1]
gi|314989264|gb|EFT33355.1| ribosomal protein S6 [Propionibacterium acnes HL005PA3]
gi|315078284|gb|EFT50323.1| ribosomal protein S6 [Propionibacterium acnes HL053PA2]
gi|315081410|gb|EFT53386.1| ribosomal protein S6 [Propionibacterium acnes HL078PA1]
gi|315084950|gb|EFT56926.1| ribosomal protein S6 [Propionibacterium acnes HL027PA2]
gi|315087480|gb|EFT59456.1| ribosomal protein S6 [Propionibacterium acnes HL002PA3]
gi|315089612|gb|EFT61588.1| ribosomal protein S6 [Propionibacterium acnes HL072PA1]
gi|315090953|gb|EFT62929.1| ribosomal protein S6 [Propionibacterium acnes HL110PA4]
gi|315095176|gb|EFT67152.1| ribosomal protein S6 [Propionibacterium acnes HL060PA1]
gi|315096893|gb|EFT68869.1| ribosomal protein S6 [Propionibacterium acnes HL038PA1]
gi|315100047|gb|EFT72023.1| ribosomal protein S6 [Propionibacterium acnes HL059PA2]
gi|315102793|gb|EFT74769.1| ribosomal protein S6 [Propionibacterium acnes HL046PA1]
gi|315105295|gb|EFT77271.1| ribosomal protein S6 [Propionibacterium acnes HL050PA2]
gi|315107347|gb|EFT79323.1| ribosomal protein S6 [Propionibacterium acnes HL030PA1]
gi|315110505|gb|EFT82481.1| ribosomal protein S6 [Propionibacterium acnes HL030PA2]
gi|327328805|gb|EGE70565.1| ribosomal protein S6 [Propionibacterium acnes HL103PA1]
gi|327332996|gb|EGE74728.1| ribosomal protein S6 [Propionibacterium acnes HL096PA2]
gi|327333988|gb|EGE75703.1| ribosomal protein S6 [Propionibacterium acnes HL096PA3]
gi|327334407|gb|EGE76118.1| ribosomal protein S6 [Propionibacterium acnes HL097PA1]
gi|327448704|gb|EGE95358.1| ribosomal protein S6 [Propionibacterium acnes HL043PA1]
gi|327449104|gb|EGE95758.1| ribosomal protein S6 [Propionibacterium acnes HL043PA2]
gi|327450361|gb|EGE97015.1| ribosomal protein S6 [Propionibacterium acnes HL013PA2]
gi|327455520|gb|EGF02175.1| ribosomal protein S6 [Propionibacterium acnes HL087PA3]
gi|327456175|gb|EGF02830.1| ribosomal protein S6 [Propionibacterium acnes HL083PA2]
gi|327457574|gb|EGF04229.1| ribosomal protein S6 [Propionibacterium acnes HL092PA1]
gi|328756816|gb|EGF70432.1| ribosomal protein S6 [Propionibacterium acnes HL087PA1]
gi|328757704|gb|EGF71320.1| ribosomal protein S6 [Propionibacterium acnes HL020PA1]
gi|328759099|gb|EGF72715.1| ribosomal protein S6 [Propionibacterium acnes HL025PA2]
gi|328762208|gb|EGF75704.1| ribosomal protein S6 [Propionibacterium acnes HL099PA1]
gi|332676617|gb|AEE73433.1| 30S ribosomal protein S6 [Propionibacterium acnes 266]
Length = 96
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +N PA I E+ R + IDE ++R+
Sbjct: 61 VVVNATCEPATIQELDRLLAIDEKIMRT 88
>gi|146329026|ref|YP_001210005.1| ribosomal protein S6 [Dichelobacter nodosus VCS1703A]
gi|166226827|sp|A5EXN1|RS6_DICNV RecName: Full=30S ribosomal protein S6
gi|146232496|gb|ABQ13474.1| ribosomal protein S6 [Dichelobacter nodosus VCS1703A]
Length = 108
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y++ I+ G+V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVSAMVERYRAQIEAAQGKVHRLEDWGRRVLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ MNI + E++ R ++ +LR + + D ++ +Q
Sbjct: 60 ILMNIECDRQTLAELESNFRFNDAILRHMIIRRDEAVTEASMMMQ 104
>gi|89100932|ref|ZP_01173779.1| ribosomal protein S6 (BS9) [Bacillus sp. NRRL B-14911]
gi|89084341|gb|EAR63495.1| ribosomal protein S6 (BS9) [Bacillus sp. NRRL B-14911]
Length = 95
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ S++ +NG E+ + G R +AY I R YY
Sbjct: 1 MRKYEIMYVIRPNIEDEAKKALVERFNSILTDNGAELTESKDWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + AA+ E R +I E+++R + +
Sbjct: 61 QLIHLNAEAAAVDEFTRLAKISEDIIRHMVV 91
>gi|319950615|ref|ZP_08024522.1| 30S ribosomal protein S6 [Dietzia cinnamea P4]
gi|319435723|gb|EFV90936.1| 30S ribosomal protein S6 [Dietzia cinnamea P4]
Length = 95
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I++ GG V V+ G R AY I K + Y
Sbjct: 1 MRQYEVMVILDPSLDERTVAPSLDTFLNVIRQEGGSVDKVDVWGKRRFAYEINKLNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + S P A+ E+ R++ ++ENVLR+ L D
Sbjct: 61 AVVQLKSEPDAVKELDRQLGLNENVLRTKVLRAD 94
>gi|295691869|ref|YP_003600479.1| 30S ribosomal protein s6 [Lactobacillus crispatus ST1]
gi|295029975|emb|CBL49454.1| 30S ribosomal protein S6 [Lactobacillus crispatus ST1]
Length = 98
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEDNKKAVVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFSRLSKIDNAILRSMTVKLD 97
>gi|58336361|ref|YP_192946.1| 30S ribosomal protein S6 [Lactobacillus acidophilus NCFM]
gi|227902588|ref|ZP_04020393.1| 30S ribosomal protein S6 [Lactobacillus acidophilus ATCC 4796]
gi|75358243|sp|Q5FN09|RS6_LACAC RecName: Full=30S ribosomal protein S6
gi|58253678|gb|AAV41915.1| 30S ribosomal protein S6 [Lactobacillus acidophilus NCFM]
gi|227869677|gb|EEJ77098.1| 30S ribosomal protein S6 [Lactobacillus acidophilus ATCC 4796]
Length = 98
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ DI K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDIDEDNKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFSRLSKIDNAILRSMTVKLD 97
>gi|309811413|ref|ZP_07705200.1| ribosomal protein S6 [Dermacoccus sp. Ellin185]
gi|308434720|gb|EFP58565.1| ribosomal protein S6 [Dermacoccus sp. Ellin185]
Length = 99
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ S++ ++GG V V+ G R +AY I+K + Y
Sbjct: 5 MRHYEMMIILDGELDERTVQPSLEKFLSVVTKDGGTVDNVDVWGRRRMAYDIKKKSEGIY 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ + PA E+ R++ ++E++LR+ L D+
Sbjct: 65 VVVDFNATPATAAELDRQLGLNESILRTKILRKDA 99
>gi|89094157|ref|ZP_01167100.1| 30S ribosomal protein S6 [Oceanospirillum sp. MED92]
gi|89081632|gb|EAR60861.1| 30S ribosomal protein S6 [Oceanospirillum sp. MED92]
Length = 140
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ + S+Q+ + +Y SLI+ G + + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPN-QSEQVSAMVERYTSLIESAEGTIHRLEDWGRRQLAYPINNAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI + E++ R ++ VLR++ +
Sbjct: 60 VLMNIECGQETLDELENLFRYNDAVLRNMVI 90
>gi|34540403|ref|NP_904882.1| 30S ribosomal protein S6 [Porphyromonas gingivalis W83]
gi|188994503|ref|YP_001928755.1| 30S ribosomal protein S6 [Porphyromonas gingivalis ATCC 33277]
gi|61216268|sp|Q7MWL3|RS6_PORGI RecName: Full=30S ribosomal protein S6
gi|226695113|sp|B2RIG3|RS6_PORG3 RecName: Full=30S ribosomal protein S6
gi|34396716|gb|AAQ65781.1| ribosomal protein S6 [Porphyromonas gingivalis W83]
gi|188594183|dbj|BAG33158.1| 30S ribosomal protein S6 [Porphyromonas gingivalis ATCC 33277]
Length = 117
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
M YE VF+L +S Q+K+ + ++ L+++ G + VNE G+R +AY I+K
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVDKFTGLLKQEGAVI--VNEENWGLRKLAYPIQKKSTG 58
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+Y + + P I +++ R DE V+R LT
Sbjct: 59 FYQLVEFQANPDVIAKLETNFRRDERVIRFLTF 91
>gi|238020008|ref|ZP_04600434.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269797400|ref|YP_003311300.1| ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282849202|ref|ZP_06258587.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294793014|ref|ZP_06758160.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|294794946|ref|ZP_06760081.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|313893842|ref|ZP_07827408.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
gi|237863532|gb|EEP64822.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269094029|gb|ACZ24020.1| ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282580906|gb|EFB86304.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294454308|gb|EFG22682.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|294455959|gb|EFG24323.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|313441406|gb|EFR59832.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
Length = 94
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ + I + ++LI GG V V+ G R +AY ++K +Y
Sbjct: 1 MNKYEVMFIVKPA-EEEATNAVIEKVEALIARVGGTVEKVDRWGKRRLAYAVKKFTDGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + PA I E+ R ++I++ VLR L +
Sbjct: 60 VLINFEAAPAEIKEIDRVLKINDEVLRHLIV 90
>gi|153956492|ref|YP_001397257.1| 30S ribosomal protein S6 [Clostridium kluyveri DSM 555]
gi|219856795|ref|YP_002473917.1| hypothetical protein CKR_3452 [Clostridium kluyveri NBRC 12016]
gi|189045461|sp|A5N440|RS6_CLOK5 RecName: Full=30S ribosomal protein S6
gi|254765231|sp|B9DXR0|RS6_CLOK1 RecName: Full=30S ribosomal protein S6
gi|146349350|gb|EDK35886.1| RpsF [Clostridium kluyveri DSM 555]
gi|219570519|dbj|BAH08503.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 95
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L + + K + +++ +I+ GG + V+ G R +AY I+K + YY
Sbjct: 1 MGKYETIFILHPSLDEEGYKANVEKFKGVIENGGGVIENVDIWGKRKLAYEIKKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + P E+ R RI + V+R + +
Sbjct: 61 TLITFNADPTLPKELDRVFRITDTVVRHIIV 91
>gi|52082636|ref|YP_081427.1| 30S ribosomal protein S6 [Bacillus licheniformis ATCC 14580]
gi|52788035|ref|YP_093864.1| 30S ribosomal protein S6 [Bacillus licheniformis ATCC 14580]
gi|319648502|ref|ZP_08002718.1| 30S ribosomal protein S6 [Bacillus sp. BT1B_CT2]
gi|81690793|sp|Q65CP3|RS6_BACLD RecName: Full=30S ribosomal protein S6
gi|52005847|gb|AAU25789.1| ribosomal protein S6 (BS9) [Bacillus licheniformis ATCC 14580]
gi|52350537|gb|AAU43171.1| RpsF [Bacillus licheniformis ATCC 14580]
gi|317389581|gb|EFV70392.1| 30S ribosomal protein S6 [Bacillus sp. BT1B_CT2]
Length = 95
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + K + ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEIMYIIRPDVDEESKKAVVERFNNILTTNGAEITETKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ + A+ E R +I ++++R + +
Sbjct: 61 QILNVQAGAEAVQEFDRLAKISDDIIRHIVV 91
>gi|42560587|ref|NP_975038.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|61215588|sp|Q6MUK4|RS6_MYCMS RecName: Full=30S ribosomal protein S6
gi|42492083|emb|CAE76680.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301320575|gb|ADK69218.1| ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 137
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +++L QD+ + K+ + + +++ ENG ++ N+LG+ Y I +K +Y
Sbjct: 2 IKKYEVMYILDQDV--KDTKELVSKLDAILAENG-KILESNDLGLLDFTYEINHKKKGFY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL---LVDSHEQSPTLT------IQRHDRDD 111
+ + + AI E +R +ID+NV+R+L L + ++EQS L+ + R+
Sbjct: 59 HVVIVEATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKYEEEQREK 118
Query: 112 RNDRFP 117
+N R P
Sbjct: 119 KNFRKP 124
>gi|300777790|ref|ZP_07087648.1| 30S ribosomal protein S6 [Chryseobacterium gleum ATCC 35910]
gi|300503300|gb|EFK34440.1| 30S ribosomal protein S6 [Chryseobacterium gleum ATCC 35910]
Length = 113
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ LI+E E+ G++ +AY I+ + +Y
Sbjct: 1 MNNYETVFILTPVLSDAQVEEAVKKFEDLIKEKNCEIVAKENWGLKKLAYPIQLKKNGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + + +++ + DE V+R LT +D H +T
Sbjct: 61 TLIEFKGEGSVVADLELAFKRDERVIRYLTTKLDKHAVEYAVT 103
>gi|222054668|ref|YP_002537030.1| ribosomal protein S6 [Geobacter sp. FRC-32]
gi|254765439|sp|B9M5U8|RS6_GEOSF RecName: Full=30S ribosomal protein S6
gi|221563957|gb|ACM19929.1| ribosomal protein S6 [Geobacter sp. FRC-32]
Length = 128
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 52/87 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+ +++K + Q +I GE++ + + G R +AY I K + Y
Sbjct: 1 MRMYETIFIVQPDLGEEELKGISARVQEVIVSMKGELKRLEDWGARKLAYPIEKFNRGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
++ A I E++R++R+++ ++R
Sbjct: 61 YYLRFDGDAALIAELERRLRLNDKIIR 87
>gi|153824152|ref|ZP_01976819.1| ribosomal protein S6 [Vibrio cholerae B33]
gi|126518329|gb|EAZ75552.1| ribosomal protein S6 [Vibrio cholerae B33]
Length = 102
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y I E GG++ + + G R +AY I K KA+YV MN+ + A + E++ R +
Sbjct: 2 IERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEADQAVVDELETAFRFN 61
Query: 83 ENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ VLR++ + + P++ ++ + + D D +V+
Sbjct: 62 DAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDADVE 102
>gi|118615983|ref|YP_904315.1| 30S ribosomal protein S6 [Mycobacterium ulcerans Agy99]
gi|183980107|ref|YP_001848398.1| 30S ribosomal protein S6 RpsF [Mycobacterium marinum M]
gi|118568093|gb|ABL02844.1| 30S ribosomal protein S6 RpsF [Mycobacterium ulcerans Agy99]
gi|183173433|gb|ACC38543.1| 30S ribosomal protein S6 RpsF [Mycobacterium marinum M]
Length = 96
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + PA + E+ R++ ++E+VLR+ + D
Sbjct: 61 AVIDVKAAPATVSELDRQLSLNESVLRTKVMRAD 94
>gi|84497233|ref|ZP_00996055.1| 30S ribosomal protein S6 [Janibacter sp. HTCC2649]
gi|84382121|gb|EAP98003.1| 30S ribosomal protein S6 [Janibacter sp. HTCC2649]
Length = 95
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 54/88 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++I ++GG V V+ G R +AY I+K + Y
Sbjct: 1 MRQYELMVILDPELDDRTVQPSLDKFLTVITKDGGTVDNVDIWGRRRLAYEIKKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
++ S PA E+ R++ ++E+++R+
Sbjct: 61 AIVDFTSEPATAKELDRQLGLNESIMRT 88
>gi|167462795|ref|ZP_02327884.1| 30S ribosomal protein S6 [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 70
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
+Q +I NGGE+ + +G R +AY I+K R +YV +N + P + E+ R M+I + +
Sbjct: 1 FQGIITNNGGEITKHDVMGKRRLAYEIKKFRDGHYVLVNFTAEPEVVKELDRVMKISDEI 60
Query: 86 LRSLTL 91
+R L +
Sbjct: 61 IRYLIV 66
>gi|110598898|ref|ZP_01387147.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
gi|110339489|gb|EAT58015.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
Length = 133
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I+K YY
Sbjct: 5 KLYECTVIIDGGLQDEAITAAMELVQRVITEKGGSISGVLEIGRRKTAYPIKKRTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ P I E+++ +R +E++LR L +
Sbjct: 65 HIEFTGAPGVIAEIEKVLRYEEDLLRYLII 94
>gi|189183703|ref|YP_001937488.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Ikeda]
gi|226695109|sp|B3CRZ7|RS6_ORITI RecName: Full=30S ribosomal protein S6
gi|189180474|dbj|BAG40254.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Ikeda]
Length = 118
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE V ++R ++SS +I + S+I G++ GMR++AY+I +N++A+Y
Sbjct: 1 MRLYELVLIVRPELSSTEIDKLTDELTSIISNYEGKLVKHEYWGMRSLAYKINRNQRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTL 102
+ + I++ + ++K K++ + ++RS + V S SP L
Sbjct: 61 IMLAISANNNILQKLKNKIKNNLEIIRSRFIKVKEISQTTSPIL 104
>gi|167747440|ref|ZP_02419567.1| hypothetical protein ANACAC_02160 [Anaerostipes caccae DSM 14662]
gi|317471169|ref|ZP_07930540.1| ribosomal protein S6 [Anaerostipes sp. 3_2_56FAA]
gi|167652802|gb|EDR96931.1| hypothetical protein ANACAC_02160 [Anaerostipes caccae DSM 14662]
gi|316901384|gb|EFV23327.1| ribosomal protein S6 [Anaerostipes sp. 3_2_56FAA]
Length = 113
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + +++I E G E+ V+E G + +AY I+K ++ YY
Sbjct: 19 MSKYELALVVNAKIEDEARAEVVEKAKAMITEAGAEITNVDEWGKKRLAYEIQKMKEGYY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + ++ K+RI ENVLR L + D+
Sbjct: 79 YFIQFDAETEVPAVLEEKLRITENVLRYLVVKQDA 113
>gi|148284319|ref|YP_001248409.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Boryong]
gi|166227358|sp|A5CCY7|RS6_ORITB RecName: Full=30S ribosomal protein S6
gi|146739758|emb|CAM79616.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Boryong]
Length = 118
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE V ++R ++SS +I + S+I G++ GMR++AY+I +N++A+Y
Sbjct: 1 MRLYELVLIVRPELSSTEIDKLTDELTSIISNYEGKLVKHEYWGMRSLAYKINRNQRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD--SHEQSPTLTIQRHDR 109
+ + I++ + ++K K++ + ++RS + V S SP L Q ++
Sbjct: 61 IMLAISANNNILQKLKNKIKNNLEIIRSRFIKVKEISQTTSPILKNQSFEQ 111
>gi|320530235|ref|ZP_08031305.1| ribosomal protein S6 [Selenomonas artemidis F0399]
gi|320137668|gb|EFW29580.1| ribosomal protein S6 [Selenomonas artemidis F0399]
Length = 100
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +F+++ + + I ++ LIQ NGG + + G + +AY I + + YYV
Sbjct: 1 MYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEINDHSEGYYVL 59
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + PA + E R M+I +++L+ + +
Sbjct: 60 LYVNAEPACVAECDRVMKITDDLLKHMIV 88
>gi|254673113|emb|CBA07856.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha275]
Length = 110
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R ++ V
Sbjct: 8 YKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAV 67
Query: 86 LRSLTLLVDSH--EQSPTL 102
LR LT+ E SP L
Sbjct: 68 LRHLTIKTKHAVTEASPML 86
>gi|317126705|ref|YP_004100817.1| 30S ribosomal protein S6P [Intrasporangium calvum DSM 43043]
gi|315590793|gb|ADU50090.1| SSU ribosomal protein S6P [Intrasporangium calvum DSM 43043]
Length = 95
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + T+ ++ +++++GG V V+ G R +AY I+K + Y
Sbjct: 1 MRQYELMVILDPETEERTVSTTMDKFLGVVKKDGGTVENVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + PA E+ R++ + E+++R+
Sbjct: 61 AVVNFTAEPATAQELDRQLNLSESIMRT 88
>gi|225571306|ref|ZP_03780302.1| hypothetical protein CLOHYLEM_07404 [Clostridium hylemonae DSM
15053]
gi|225159782|gb|EEG72401.1| hypothetical protein CLOHYLEM_07404 [Clostridium hylemonae DSM
15053]
Length = 109
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + ++L++ GG V V+E G + +AY I+K ++AYY
Sbjct: 15 MNKYELAVVVSAKIEDDERAQVVEKVKALVERFGGSVTDVDEWGKKRLAYEIQKMKEAYY 74
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S E+++++RI +NVLR L +
Sbjct: 75 YFIHFESAAEVPGEIEQRIRIMDNVLRYLCV 105
>gi|332654783|ref|ZP_08420525.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
gi|332516126|gb|EGJ45734.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
Length = 98
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++L +S + I + +++++++ NG V ++E G R +AY I + YYV M
Sbjct: 8 YEAMYILDPALSEEAIAALVAKFKAVVEANG-TVSEIDEWGKRRLAYPINDLMEGYYVLM 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ A E+ R RI + V+RSL + D
Sbjct: 67 TFNAAAAIPAELDRIFRITDGVMRSLIVCKD 97
>gi|227877547|ref|ZP_03995607.1| 30S ribosomal protein S6 [Lactobacillus crispatus JV-V01]
gi|256849620|ref|ZP_05555052.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-1A-US]
gi|262046288|ref|ZP_06019251.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-3A-US]
gi|227862846|gb|EEJ70305.1| 30S ribosomal protein S6 [Lactobacillus crispatus JV-V01]
gi|256713736|gb|EEU28725.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-1A-US]
gi|260573618|gb|EEX30175.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-3A-US]
Length = 98
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEDNKKALVENYDKVIADNGGTMVESKDWGQRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFSRLSKIDNAILRSMTVKLD 97
>gi|222530065|ref|YP_002573947.1| 30S ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
gi|222456912|gb|ACM61174.1| ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
Length = 96
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + + I ++++LI NG ++ V E G R +AY+I K+ + YYV M
Sbjct: 6 YETVFIISPTLDDEARANLIEKFKNLISSNG-QLLNVEEWGKRRLAYKIDKHAEGYYVLM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R L +
Sbjct: 65 QFTSKPEFPRELERVYRITDGVIRFLIV 92
>gi|62185392|ref|YP_220177.1| 30S ribosomal protein S6 [Chlamydophila abortus S26/3]
gi|329943158|ref|ZP_08291932.1| ribosomal protein S6 [Chlamydophila psittaci Cal10]
gi|332287740|ref|YP_004422641.1| 30S ribosomal protein S6 [Chlamydophila psittaci 6BC]
gi|81312458|sp|Q5L565|RS6_CHLAB RecName: Full=30S ribosomal protein S6
gi|62148459|emb|CAH64229.1| putative 30S ribosomal protein S6 [Chlamydophila abortus S26/3]
gi|313848311|emb|CBY17314.1| putative 30S ribosomal protein S6 [Chlamydophila psittaci RD1]
gi|325506437|gb|ADZ18075.1| 30S ribosomal protein S6 [Chlamydophila psittaci 6BC]
gi|328814705|gb|EGF84695.1| ribosomal protein S6 [Chlamydophila psittaci Cal10]
gi|328914994|gb|AEB55827.1| ribosomal protein S6 [Chlamydophila psittaci 6BC]
Length = 112
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEEARRKALEKVTSGITNYGGEILKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P I E+ ++ ++E++LR LTL D+
Sbjct: 67 LIYFTVVPGVIAELWKEYHLNEDLLRFLTLKTDA 100
>gi|194098900|ref|YP_002001965.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae NCCP11945]
gi|193934190|gb|ACF30014.1| ribosomal protein S6 [Neisseria gonorrhoeae NCCP11945]
Length = 102
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R ++ V
Sbjct: 5 YKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVGELETAFRFNDAV 64
Query: 86 LRSLTLLVDSH--EQSPTL 102
LR LT+ E SP L
Sbjct: 65 LRHLTIKTKHAVTEASPML 83
>gi|302870699|ref|YP_003839336.1| 30S ribosomal protein S6 [Micromonospora aurantiaca ATCC 27029]
gi|315506936|ref|YP_004085823.1| ribosomal protein s6 [Micromonospora sp. L5]
gi|302573558|gb|ADL49760.1| ribosomal protein S6 [Micromonospora aurantiaca ATCC 27029]
gi|315413555|gb|ADU11672.1| ribosomal protein S6 [Micromonospora sp. L5]
Length = 96
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + P A+ E+ R++R++E+VLR+
Sbjct: 61 AVIDLQATPEAVGELDRQLRLNESVLRT 88
>gi|29840575|ref|NP_829681.1| 30S ribosomal protein S6 [Chlamydophila caviae GPIC]
gi|33301537|sp|Q821W7|RS6_CHLCV RecName: Full=30S ribosomal protein S6
gi|29834925|gb|AAP05559.1| ribosomal protein S6 [Chlamydophila caviae GPIC]
Length = 112
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEEARRKALEKVTSGITNYGGEILKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P I E+ ++ ++E++LR LTL D+
Sbjct: 67 LIYFTVVPGVIAELWKEYHLNEDLLRFLTLKADA 100
>gi|284993411|ref|YP_003411966.1| 30S ribosomal protein S6 [Geodermatophilus obscurus DSM 43160]
gi|284066657|gb|ADB77595.1| ribosomal protein S6 [Geodermatophilus obscurus DSM 43160]
Length = 95
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + I ++ ++ +++ +GG V+ G R +AY I K + Y
Sbjct: 1 MRRYELMVILDPDLEERTIAPSLDRFLTVVTNSGGTVK-TEIWGRRRLAYEINKQVEGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
++I + PAA+ E+ R++ ++E+VLR+
Sbjct: 60 AIVDIQATPAAVAELDRQLNLNESVLRT 87
>gi|317507599|ref|ZP_07965313.1| ribosomal protein S6 [Segniliparus rugosus ATCC BAA-974]
gi|316254119|gb|EFV13475.1| ribosomal protein S6 [Segniliparus rugosus ATCC BAA-974]
Length = 95
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + + + +++E GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMLILDPNIDERTVAPAVDKLLGVVREEGGAVEKVDVWGRRRLAYEIAKKGEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + + + E+ R++RI+E VLR+ L
Sbjct: 61 AVVDLKAQSSTVSELDRQLRINETVLRAKVL 91
>gi|239907340|ref|YP_002954081.1| 30S ribosomal protein S6 [Desulfovibrio magneticus RS-1]
gi|259495331|sp|C4XGN7|RS6_DESMR RecName: Full=30S ribosomal protein S6
gi|239797206|dbj|BAH76195.1| 30S ribosomal protein S6 [Desulfovibrio magneticus RS-1]
Length = 102
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL ++++ ++ + + +++ G + V+E GM+ +AY ++K + +Y
Sbjct: 1 MRKYEALLLLSPELATDNRQEIVENLKGVLERQGTTMLSVDEWGMKDLAYPVQKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSH 96
A+P AI E +R +RI + V++ +T+ L D +
Sbjct: 61 TRFEFAAPATAIAEFERIVRITDGVMKFITVKLADKY 97
>gi|188997590|ref|YP_001931841.1| ribosomal protein S6 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932657|gb|ACD67287.1| ribosomal protein S6 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 104
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S ++IK + + LIQ+N GE+ G R +AY I K YY
Sbjct: 1 MRHYELVFVLKPTLSEEEIKTRVQAIKDLIQQNQGEIYNEENWGRRNLAYPINKFNSGYY 60
Query: 61 VFMNIASPPAAI-HEMKRKMRIDENVLRSLTL 91
+N + + + ++ +RI+E+V+R L +
Sbjct: 61 FLINFKTGNSNLPATLEYNLRINEDVIRFLNM 92
>gi|297618491|ref|YP_003703650.1| ribosomal protein S6 [Syntrophothermus lipocalidus DSM 12680]
gi|297146328|gb|ADI03085.1| ribosomal protein S6 [Syntrophothermus lipocalidus DSM 12680]
Length = 97
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV-RLVNELGMRTIAYRIRKNRKAY 59
M+ YE +++LR D++ + I+ + +++I GGE R G R +AY I + Y
Sbjct: 1 MRPYELMYILRPDLTPEAIEAAKERVRTIIASTGGEFEREAEGWGKRRLAYEIEDFTEGY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
YV P + E+ R ++I E+ LR + L +D
Sbjct: 61 YVVCYFKGQPETVRELDRVLKISEDFLRHIILRLD 95
>gi|296392715|ref|YP_003657599.1| 30S ribosomal protein S6 [Segniliparus rotundus DSM 44985]
gi|296179862|gb|ADG96768.1| ribosomal protein S6 [Segniliparus rotundus DSM 44985]
Length = 95
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + + + +++E GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMLILDPNIDERTVAPAVDKLLGVVREEGGSVEKVDVWGRRRLAYEIAKRGEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + + + E+ R++RI+E VLR+ L
Sbjct: 61 AVVDLKAQSSTVSELDRQLRINETVLRAKVL 91
>gi|330470802|ref|YP_004408545.1| ribosomal protein s6 [Verrucosispora maris AB-18-032]
gi|328813773|gb|AEB47945.1| ribosomal protein s6 [Verrucosispora maris AB-18-032]
Length = 96
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + P A+ E+ R++R++E+VLR+
Sbjct: 61 AVVDLQATPEAVAELDRQLRLNESVLRT 88
>gi|227893832|ref|ZP_04011637.1| 30S ribosomal protein S6 [Lactobacillus ultunensis DSM 16047]
gi|227864321|gb|EEJ71742.1| 30S ribosomal protein S6 [Lactobacillus ultunensis DSM 16047]
Length = 98
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEDSKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFSRLSKIDNAILRSMTVKLD 97
>gi|256843825|ref|ZP_05549312.1| 30S ribosomal protein S6 [Lactobacillus crispatus 125-2-CHN]
gi|293380897|ref|ZP_06626933.1| 30S ribosomal protein S6 [Lactobacillus crispatus 214-1]
gi|312977112|ref|ZP_07788861.1| ribosomal protein S6 [Lactobacillus crispatus CTV-05]
gi|315037237|ref|YP_004030805.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1112]
gi|325955728|ref|YP_004286338.1| 30S ribosomal protein S6 [Lactobacillus acidophilus 30SC]
gi|256613730|gb|EEU18932.1| 30S ribosomal protein S6 [Lactobacillus crispatus 125-2-CHN]
gi|290922570|gb|EFD99536.1| 30S ribosomal protein S6 [Lactobacillus crispatus 214-1]
gi|310896440|gb|EFQ45505.1| ribosomal protein S6 [Lactobacillus crispatus CTV-05]
gi|312275370|gb|ADQ58010.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1112]
gi|325332293|gb|ADZ06201.1| 30S ribosomal protein S6 [Lactobacillus acidophilus 30SC]
gi|327182556|gb|AEA31003.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1118]
Length = 98
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEDNKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFSRLSKIDNAILRSMTVKLD 97
>gi|146301224|ref|YP_001195815.1| 30S ribosomal protein S6 [Flavobacterium johnsoniae UW101]
gi|189045468|sp|A5FE77|RS6_FLAJO RecName: Full=30S ribosomal protein S6
gi|146155642|gb|ABQ06496.1| 30S ribosomal protein S6 [Flavobacterium johnsoniae UW101]
Length = 113
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEVQVKETVTKFEEFLTSRGAEMVSKEDWGLKKMAYEIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + + R DE V+R LT+ +D H S
Sbjct: 61 HLFEFKVAGEVLIAFETEFRRDERVMRFLTVSLDKHAIS 99
>gi|327403001|ref|YP_004343839.1| 30S ribosomal protein S6P [Fluviicola taffensis DSM 16823]
gi|327318509|gb|AEA43001.1| SSU ribosomal protein S6P [Fluviicola taffensis DSM 16823]
Length = 115
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q K+ + +Y+S + GG++ G++ +AY I+K +Y
Sbjct: 1 MNSYETVFILTPVLSEDQAKEAVQKYESELAAMGGKLTHSESWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ I +++ M+ DE ++R LT+ +D
Sbjct: 61 FLFQFDGEGSVIADLELIMKRDERIMRFLTVKMD 94
>gi|317164471|gb|ADV08012.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 105
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R ++ V
Sbjct: 8 YKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVGELETAFRFNDAV 67
Query: 86 LRSLTLLVDSH--EQSPTL 102
LR LT+ E SP L
Sbjct: 68 LRHLTIKTKHAVTEASPML 86
>gi|148265698|ref|YP_001232404.1| 30S ribosomal protein S6 [Geobacter uraniireducens Rf4]
gi|189045470|sp|A5G7R3|RS6_GEOUR RecName: Full=30S ribosomal protein S6
gi|146399198|gb|ABQ27831.1| SSU ribosomal protein S6P [Geobacter uraniireducens Rf4]
Length = 128
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 51/87 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+ +++K + Q +I G+ + + + G R +AY I K + Y
Sbjct: 1 MRMYETIFIVQPDLGEEEMKGISTKVQDVIASMKGDFKRLEDWGPRKLAYPINKFARGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
++ A I E++R++R+D+ V+R
Sbjct: 61 YYLRFDGDSALIAELERRLRLDDKVIR 87
>gi|331703044|ref|YP_004399731.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|256383834|gb|ACU78404.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384665|gb|ACU79234.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455925|gb|ADH22160.1| 30S ribosomal protein S6 [synthetic Mycoplasma mycoides
JCVI-syn1.0]
gi|328801599|emb|CBW53752.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 137
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +++L QD+ + K+ + + +++ ENG ++ N+LG+ Y I +K +Y
Sbjct: 2 IKKYEVMYILDQDV--KDTKELVTKLDAILAENG-KILESNDLGLLDFTYEINHKKKGFY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL---LVDSHEQSPTLT------IQRHDRDD 111
+ + + AI E +R +ID+NV+R+L L + ++EQS L+ + R+
Sbjct: 59 HVVIVEATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKYEEEQREK 118
Query: 112 RNDRFP 117
+N R P
Sbjct: 119 KNFRKP 124
>gi|153855509|ref|ZP_01996628.1| hypothetical protein DORLON_02642 [Dorea longicatena DSM 13814]
gi|149752031|gb|EDM61962.1| hypothetical protein DORLON_02642 [Dorea longicatena DSM 13814]
Length = 95
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 1 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGQISDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E+++++RI +NV+R L + D+
Sbjct: 61 YFIHFESDAETPSEIEQRIRIMDNVIRFLCVRQDA 95
>gi|86133512|ref|ZP_01052094.1| 30S ribosomal protein S6 [Polaribacter sp. MED152]
gi|85820375|gb|EAQ41522.1| 30S ribosomal protein S6 [Polaribacter sp. MED152]
Length = 113
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ ++ + G E+ + G++ +AY I+K + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIKETVQKFNDYLVSKGAEMISKEDWGLKKLAYPIQKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I + + R D++V+R LT+ +D H +
Sbjct: 61 HLFEFKIAGEEITAFELEFRRDDSVMRYLTVRLDKHAAA 99
>gi|213962687|ref|ZP_03390948.1| ribosomal protein S6 [Capnocytophaga sputigena Capno]
gi|213954682|gb|EEB66003.1| ribosomal protein S6 [Capnocytophaga sputigena Capno]
Length = 113
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIKEAVEKFENFLTSRGAEFVAKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKH 96
>gi|166363872|ref|YP_001656145.1| 30S ribosomal protein S6 [Microcystis aeruginosa NIES-843]
gi|226703489|sp|B0JSQ9|RS6_MICAN RecName: Full=30S ribosomal protein S6
gi|166086245|dbj|BAG00953.1| 30S ribosomal protein S6 [Microcystis aeruginosa NIES-843]
Length = 129
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ + ++ + +Y++LI E+ V G + +AY I+K YV M
Sbjct: 5 YETLYILRPDLGEEVVQQQVERYRTLITEHSATDIQVKVWGKKRLAYPIKKLNDGVYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + + M+R MR+ + V+R LTL +D
Sbjct: 65 NYQASGKQVAPMERAMRLSDEVIRYLTLKLD 95
>gi|225432037|ref|XP_002273724.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296083213|emb|CBI22849.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q I+E G++ +N+ G+R +AY+I+K + A+Y
Sbjct: 127 MRHYEVVYLIHEK-HDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKAKNAHY 185
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE V+R L +
Sbjct: 186 ILMNFELEAQWINDFKTMLDQDERVIRHLVI 216
>gi|258591289|emb|CBE67586.1| 30S ribosomal protein S6 (modular protein) [NC10 bacterium 'Dutch
sediment']
Length = 126
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L ++ + I IG + ++ + GG++ + + G + +AY ++K R+ Y
Sbjct: 1 MGHYEVIIILDPALTEESIDTEIGGVREVVTKKGGQMLEIQKWGKKRLAYEVKKRREGQY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V M + P + ++ R RI E +L+ +
Sbjct: 61 VLMKVDGPGGVVADLDRHFRITEVILKGAVV 91
>gi|256820493|ref|YP_003141772.1| 30S ribosomal protein S6 [Capnocytophaga ochracea DSM 7271]
gi|315223594|ref|ZP_07865449.1| 30S ribosomal protein S6 [Capnocytophaga ochracea F0287]
gi|256582076|gb|ACU93211.1| ribosomal protein S6 [Capnocytophaga ochracea DSM 7271]
gi|314946510|gb|EFS98504.1| 30S ribosomal protein S6 [Capnocytophaga ochracea F0287]
Length = 113
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSDTQIKEAVEKFENFLTSRGAEFVAKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKH 96
>gi|223982849|ref|ZP_03633070.1| hypothetical protein HOLDEFILI_00344 [Holdemania filiformis DSM
12042]
gi|223965171|gb|EEF69462.1| hypothetical protein HOLDEFILI_00344 [Holdemania filiformis DSM
12042]
Length = 96
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 1 MKLYEHVFLLRQ---DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
MK YE ++++ D + QQ+ D + ++I +NGG++ V++ G++ AYRI K
Sbjct: 1 MKKYEVMYIVNASLDDAARQQVIDGL---HAIITDNGGKILKVDDWGVKEFAYRIEDMTK 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
YY+ + + A + E R RI+ N++R + +
Sbjct: 58 GYYMVVTFEADNATVKEFDRLSRINANIVRYMII 91
>gi|254520714|ref|ZP_05132770.1| RpsF [Clostridium sp. 7_2_43FAA]
gi|226914463|gb|EEH99664.1| RpsF [Clostridium sp. 7_2_43FAA]
Length = 96
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I+ GG + V+ G R +AY I K + +Y
Sbjct: 2 MRKYETIFILHPSLDEEACKANIEKFKGVIENGGGTIENVDVWGRRKLAYEIAKVNEGFY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + E+ R RI + VLR + +
Sbjct: 62 TLINFNADSELPKELDRIFRITDGVLRHIIV 92
>gi|159026117|emb|CAO88785.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 129
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ + ++ + +Y++LI E+ V G + +AY I+K YV M
Sbjct: 5 YETLYILRPDLGEEVVQQQVERYRTLITEHSATDIEVKVWGKKRLAYPIKKLNDGVYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + + M+R MR+ + V+R LTL +D
Sbjct: 65 NYQASGKQVAPMERAMRLSDEVIRYLTLKLD 95
>gi|194701658|gb|ACF84913.1| unknown [Zea mays]
gi|223975025|gb|ACN31700.1| unknown [Zea mays]
Length = 310
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D +++++ + + Q I+E G + +N G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHED-RVEEVENVVSKVQDFIREKKGRIWRLNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE ++R L +
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERIIRHLVM 212
>gi|119713692|gb|ABL97742.1| ribosomal protein S6 [uncultured marine bacterium EB0_41B09]
Length = 203
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I + Q + N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPSMIERIQKSVTANKGNIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V MNI ++ E++ + ++ V+R L +
Sbjct: 60 VLMNIECSLESLAELEHNFKFNDAVIRHLVV 90
>gi|210613751|ref|ZP_03289865.1| hypothetical protein CLONEX_02072 [Clostridium nexile DSM 1787]
gi|210150960|gb|EEA81968.1| hypothetical protein CLONEX_02072 [Clostridium nexile DSM 1787]
Length = 95
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I TI + + LI GG V V+E G + +AY I+K ++ YY
Sbjct: 1 MNKYELAVVVNAKIEDDARTATIEKVKELIARFGGNVTDVDEWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S EM+ ++RI +NVLR L +
Sbjct: 61 YFIHFESDATVPAEMEARLRIMDNVLRYLCV 91
>gi|161506641|ref|YP_001576589.1| 30S ribosomal protein S6 [Lactobacillus helveticus DPC 4571]
gi|189045473|sp|A8YW47|RS6_LACH4 RecName: Full=30S ribosomal protein S6
gi|160347630|gb|ABX26304.1| 30S ribosomal protein S6 [Lactobacillus helveticus DPC 4571]
gi|323465564|gb|ADX69251.1| 30S ribosomal protein S6 [Lactobacillus helveticus H10]
gi|328468766|gb|EGF39737.1| 30S ribosomal protein S6 [Lactobacillus helveticus MTCC 5463]
Length = 98
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++ D+ + K + Y +I +NGG + + G R AY I K R+ Y M
Sbjct: 6 YEVTYIIKPDVDEESKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHIM 65
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ A A++E R +ID +LRS+T+ +D
Sbjct: 66 TFTADNADAVNEFGRLSKIDNMILRSMTVKLD 97
>gi|226529314|ref|NP_001150742.1| ribosomal protein S6 containing protein [Zea mays]
gi|195641412|gb|ACG40174.1| ribosomal protein S6 containing protein [Zea mays]
Length = 310
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D +++++ + + Q I+E G + +N G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHED-RVEEVENVVSKVQDFIREKKGRIWRLNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE ++R L +
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERIIRHLVM 212
>gi|254283856|ref|ZP_04958824.1| Na+/solute symporter [gamma proteobacterium NOR51-B]
gi|219680059|gb|EED36408.1| Na+/solute symporter [gamma proteobacterium NOR51-B]
Length = 127
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y ++I ++GG V + + G R ++Y I K KA+YV MN+ + A+ E+ R +
Sbjct: 2 IERYTNVITKDGGTVHRLEDWGRRQLSYHINKVHKAHYVLMNVEASNEAMEELTTTFRFN 61
Query: 83 ENVLRSLTLLVDS--HEQSPTLTIQRHDRD 110
+ V+R+L + D E+S + ++ DR+
Sbjct: 62 DAVIRNLVIRRDEPVAEESLIMKAEKEDRE 91
>gi|169631972|ref|YP_001705621.1| 30S ribosomal protein S6 [Mycobacterium abscessus ATCC 19977]
gi|226695103|sp|B1MMI2|RS6_MYCA9 RecName: Full=30S ribosomal protein S6
gi|169243939|emb|CAM64967.1| 30S ribosomal protein S6 [Mycobacterium abscessus]
Length = 96
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++ +GG V V G R +AY I K+ + Y
Sbjct: 1 MRQYEIMVILDPTLDERTVAPSLDTFLNVVRGDGGTVSKVEVWGKRRLAYEIAKHTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AVIDVVAAPATVSELDRQLGLNESVLRTKVL 91
>gi|153803776|ref|ZP_01958362.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
gi|124120686|gb|EAY39429.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
Length = 95
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRI 81
V MN+ + A + E++ R
Sbjct: 60 VLMNVEADQAVVDELETAFRF 80
>gi|51246447|ref|YP_066331.1| 30S ribosomal protein S6 [Desulfotalea psychrophila LSv54]
gi|182705274|sp|Q6AK02|RS6_DESPS RecName: Full=30S ribosomal protein S6
gi|50877484|emb|CAG37324.2| similar to 30S ribosomal protein S6 [Desulfotalea psychrophila
LSv54]
Length = 159
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 5 EHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM-RTIAYRIRKNRKAYYVFM 63
E +++LR +S + I I +I ++ G + G +++ RK+ + YYV+
Sbjct: 5 ETIYILRPTMSEEHINTVIENTNKIILDDAGTIIFYEPSGAUKSLLTUSRKSSQGYYVYC 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ A PAA+ EM+R+ RI++ VL+ +T+
Sbjct: 65 DYAGTPAAVSEMERRFRIEDAVLKYMTV 92
>gi|78185873|ref|YP_378307.1| 30S ribosomal protein S6 [Synechococcus sp. CC9902]
gi|123580903|sp|Q3AVM1|RS6_SYNS9 RecName: Full=30S ribosomal protein S6
gi|78170167|gb|ABB27264.1| SSU ribosomal protein S6P [Synechococcus sp. CC9902]
Length = 126
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ +I E G EV L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHVTKYRDMIVEAGAEV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MRI E+V+R LT+
Sbjct: 66 LSHNGDGQQVEVLEKAMRISEDVIRYLTV 94
>gi|89898003|ref|YP_515113.1| 30S ribosomal protein S6 [Chlamydophila felis Fe/C-56]
gi|123483774|sp|Q255S0|RS6_CHLFF RecName: Full=30S ribosomal protein S6
gi|89331375|dbj|BAE80968.1| 30S ribosomal protein S6 [Chlamydophila felis Fe/C-56]
Length = 112
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEEARRKALEKVTSGIINYGGEILKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P I E+ ++ ++E++LR LTL D+
Sbjct: 67 LIYFSVVPGVIAELWKEYHLNEDLLRFLTLKTDA 100
>gi|15839150|ref|NP_299838.1| 30S ribosomal protein S6 [Xylella fastidiosa 9a5c]
gi|28199812|ref|NP_780126.1| 30S ribosomal protein S6 [Xylella fastidiosa Temecula1]
gi|71899834|ref|ZP_00681984.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|182682564|ref|YP_001830724.1| 30S ribosomal protein S6 [Xylella fastidiosa M23]
gi|54039538|sp|P66605|RS6_XYLFT RecName: Full=30S ribosomal protein S6
gi|54041980|sp|P66604|RS6_XYLFA RecName: Full=30S ribosomal protein S6
gi|226705650|sp|B2I9S9|RS6_XYLF2 RecName: Full=30S ribosomal protein S6
gi|9107773|gb|AAF85358.1|AE004063_7 30S ribosomal protein S6 [Xylella fastidiosa 9a5c]
gi|28057933|gb|AAO29775.1| 30S ribosomal protein S6 [Xylella fastidiosa Temecula1]
gi|71730425|gb|EAO32506.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|182632674|gb|ACB93450.1| ribosomal protein S6 [Xylella fastidiosa M23]
gi|307578844|gb|ADN62813.1| 30S ribosomal protein S6 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 143
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V L+ D S+Q++ + +Y++LI+ G++ + + G R +AY I+K KA+Y+ M
Sbjct: 5 YEIVLLVHPD-QSEQVQAMLERYKALIENGHGKIHRLEDWGRRQLAYPIQKLVKAHYLMM 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
NI + ++E+ R ++ +LR L + + + ++ +DD+ D+ R R D
Sbjct: 64 NIEVEQSVLNELVDLFRFNDAILRHLAIKRSGPDTEQSFIMKS--KDDKGDKPERRRRDD 121
>gi|32491011|ref|NP_871265.1| 30S ribosomal protein S6 [Wigglesworthia glossinidia endosymbiont
of Glossina brevipalpis]
gi|31340385|sp|Q8D2U2|RS6_WIGBR RecName: Full=30S ribosomal protein S6
gi|25166217|dbj|BAC24408.1| rpsF [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 113
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S QI + I Y +I+ N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLMIHTD-QSDQISNIIEHYTKMIKINKGSIHRLEDWGRRQLAYPIKKLNKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+ MNI + ++ + + + ++ ++R++ + V + P+
Sbjct: 60 ILMNIETSTKVLNNIIQDLNLNNFIIRNMIMRVKNAINEPS 100
>gi|229542335|ref|ZP_04431395.1| ribosomal protein S6 [Bacillus coagulans 36D1]
gi|229326755|gb|EEN92430.1| ribosomal protein S6 [Bacillus coagulans 36D1]
Length = 95
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +++ G E+ E G R +AY I+ R YY
Sbjct: 1 MRKYEIMYIIRPNIEDEAKKALVERFDNVLNNQGAEIIESKEWGKRRLAYEIQDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ + P A+ E R +I+ +++R + +
Sbjct: 61 HIINVNAEPVAVQEFDRLAKINGDIIRHIVV 91
>gi|210634871|ref|ZP_03298346.1| hypothetical protein COLSTE_02275 [Collinsella stercoris DSM
13279]
gi|210158586|gb|EEA89557.1| hypothetical protein COLSTE_02275 [Collinsella stercoris DSM
13279]
Length = 97
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + ++ + + + + I E G+V V+E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPNLDPETRLAVMKRIDTTIAEGNGKVDNVDEWGKRKLAYAIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + PA+I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPASIAELDRVLRITDAVIRHMIVRRDDQE 97
>gi|332308095|ref|YP_004435946.1| ribosomal protein S6 [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175424|gb|AEE24678.1| ribosomal protein S6 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 134
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ +NGG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGILTQNGGTIHRMEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V +N + A+ E++ R ++ VLR+L + EQSP
Sbjct: 60 VLINAEASAEAVEELETAFRFNDVVLRNLVMRTKDAETEQSP 101
>gi|154508268|ref|ZP_02043910.1| hypothetical protein ACTODO_00764 [Actinomyces odontolyticus ATCC
17982]
gi|293191180|ref|ZP_06609113.1| ribosomal protein S6 [Actinomyces odontolyticus F0309]
gi|153797902|gb|EDN80322.1| hypothetical protein ACTODO_00764 [Actinomyces odontolyticus ATCC
17982]
gi|292820601|gb|EFF79570.1| ribosomal protein S6 [Actinomyces odontolyticus F0309]
Length = 90
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L I + + + +Y + + NGG V V+ G R +AY I K + YV +++
Sbjct: 1 MVILDPSIDERTVAPMMEKYLAPVAANGGSVENVDVWGKRRLAYDILKRSEGIYVVIDMT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P E+ R+M IDE +LR+ L D+H
Sbjct: 61 TTPEVALEINRRMGIDETILRTKLLRPDAH 90
>gi|94676773|ref|YP_589002.1| ribosomal protein S6 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166226803|sp|Q1LSR2|RS6_BAUCH RecName: Full=30S ribosomal protein S6
gi|94219923|gb|ABF14082.1| ribosomal protein S6 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 125
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ I +Y ++I G++ + + G R ++Y I+K KA+Y
Sbjct: 1 MRHYEIVLMVHPD-QSEQVSRMIERYSTVITSAQGKIHRLEDWGRRQLSYPIKKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPR 118
V +N+ + + E+ + +R +E ++RS+ + V E SP + + + +++
Sbjct: 60 VLINLEASQKVMDELSKYLRFNEAIIRSMIMRVKHIVTEASPMVKTKDDNLVTEINKYSE 119
Query: 119 DRN 121
++N
Sbjct: 120 EKN 122
>gi|269797043|ref|YP_003316498.1| 30S ribosomal protein S6P [Sanguibacter keddieii DSM 10542]
gi|269099228|gb|ACZ23664.1| SSU ribosomal protein S6P [Sanguibacter keddieii DSM 10542]
Length = 95
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + ++ +Y ++I GG V V+ G R +A+ I+K + Y
Sbjct: 1 MRQYELMIILDPEIEERTVAPSLDKYLTVISTEGGSVDKVDIWGRRRLAFEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + PA E+ R++ ++E VLR+ L D
Sbjct: 61 AVVDFTATPATAKELDRQLGLNEVVLRTKILRAD 94
>gi|116071824|ref|ZP_01469092.1| Ribosomal protein S6 [Synechococcus sp. BL107]
gi|116065447|gb|EAU71205.1| Ribosomal protein S6 [Synechococcus sp. BL107]
Length = 126
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ +I E G EV L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHVTKYRDMIVEAGAEV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MRI E+V+R LT+
Sbjct: 66 LSHNGDGQQVEVLEKAMRISEDVIRYLTV 94
>gi|259500771|ref|ZP_05743673.1| 30S ribosomal protein S6 [Lactobacillus iners DSM 13335]
gi|302190778|ref|ZP_07267032.1| 30S ribosomal protein S6 [Lactobacillus iners AB-1]
gi|309804070|ref|ZP_07698151.1| ribosomal protein S6 [Lactobacillus iners LactinV 11V1-d]
gi|309804877|ref|ZP_07698939.1| ribosomal protein S6 [Lactobacillus iners LactinV 09V1-c]
gi|309805926|ref|ZP_07699958.1| ribosomal protein S6 [Lactobacillus iners LactinV 03V1-b]
gi|309807788|ref|ZP_07701720.1| ribosomal protein S6 [Lactobacillus iners LactinV 01V1-a]
gi|309809795|ref|ZP_07703649.1| ribosomal protein S6 [Lactobacillus iners SPIN 2503V10-D]
gi|312871257|ref|ZP_07731355.1| ribosomal protein S6 [Lactobacillus iners LEAF 3008A-a]
gi|312872810|ref|ZP_07732875.1| ribosomal protein S6 [Lactobacillus iners LEAF 2062A-h1]
gi|312873316|ref|ZP_07733371.1| ribosomal protein S6 [Lactobacillus iners LEAF 2052A-d]
gi|312874765|ref|ZP_07734784.1| ribosomal protein S6 [Lactobacillus iners LEAF 2053A-b]
gi|315654137|ref|ZP_07907053.1| 30S ribosomal protein S6 [Lactobacillus iners ATCC 55195]
gi|325912274|ref|ZP_08174671.1| ribosomal protein S6 [Lactobacillus iners UPII 143-D]
gi|325913656|ref|ZP_08176018.1| ribosomal protein S6 [Lactobacillus iners UPII 60-B]
gi|329919744|ref|ZP_08276695.1| ribosomal protein S6 [Lactobacillus iners SPIN 1401G]
gi|259167465|gb|EEW51960.1| 30S ribosomal protein S6 [Lactobacillus iners DSM 13335]
gi|308163838|gb|EFO66104.1| ribosomal protein S6 [Lactobacillus iners LactinV 11V1-d]
gi|308165816|gb|EFO68037.1| ribosomal protein S6 [Lactobacillus iners LactinV 09V1-c]
gi|308167702|gb|EFO69849.1| ribosomal protein S6 [Lactobacillus iners LactinV 03V1-b]
gi|308168890|gb|EFO70976.1| ribosomal protein S6 [Lactobacillus iners LactinV 01V1-a]
gi|308169974|gb|EFO72013.1| ribosomal protein S6 [Lactobacillus iners SPIN 2503V10-D]
gi|311089510|gb|EFQ47935.1| ribosomal protein S6 [Lactobacillus iners LEAF 2053A-b]
gi|311091196|gb|EFQ49585.1| ribosomal protein S6 [Lactobacillus iners LEAF 2052A-d]
gi|311091852|gb|EFQ50231.1| ribosomal protein S6 [Lactobacillus iners LEAF 2062A-h1]
gi|311093271|gb|EFQ51617.1| ribosomal protein S6 [Lactobacillus iners LEAF 3008A-a]
gi|315488833|gb|EFU78479.1| 30S ribosomal protein S6 [Lactobacillus iners ATCC 55195]
gi|325475933|gb|EGC79102.1| ribosomal protein S6 [Lactobacillus iners UPII 143-D]
gi|325477015|gb|EGC80165.1| ribosomal protein S6 [Lactobacillus iners UPII 60-B]
gi|328937091|gb|EGG33519.1| ribosomal protein S6 [Lactobacillus iners SPIN 1401G]
Length = 98
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE ++++ DI K I ++ ++ +NG + + G R AY I K R+ Y++
Sbjct: 6 YEITYIIKPDIDEDSKKALIERFDKVVTDNGAQELESKDWGKRHFAYEIEKYREGTYHIL 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+A AA+ E R RID +LRS+T+ +D
Sbjct: 66 TFVAENAAAVDEFGRLSRIDGQILRSMTVKLD 97
>gi|88800241|ref|ZP_01115808.1| 30S ribosomal protein S6 [Reinekea sp. MED297]
gi|88776956|gb|EAR08164.1| 30S ribosomal protein S6 [Reinekea sp. MED297]
Length = 139
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y +++ + GG V + G R +A+ I+ KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSEQVPAMVERYTTVVTDAGGTVHRNEDWGRRQLAFPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N+ I ++K R ++ +LRSL +
Sbjct: 60 ILLNVEVSDETIDDLKTTFRFNDAILRSLIM 90
>gi|226309318|ref|YP_002769278.1| 30S ribosomal protein S6 [Rhodococcus erythropolis PR4]
gi|229489891|ref|ZP_04383746.1| ribosomal protein S6 [Rhodococcus erythropolis SK121]
gi|259495342|sp|C0ZV45|RS6_RHOE4 RecName: Full=30S ribosomal protein S6
gi|226188435|dbj|BAH36539.1| 30S ribosomal protein S6 [Rhodococcus erythropolis PR4]
gi|229323187|gb|EEN88953.1| ribosomal protein S6 [Rhodococcus erythropolis SK121]
Length = 95
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 55/91 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG + V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRQHGGTIDKVDVWGKRRLAYEILKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++I + PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AVIDINATPATVAELDRQLGLNESVLRTKVL 91
>gi|119962193|ref|YP_949832.1| 30S ribosomal protein S6 [Arthrobacter aurescens TC1]
gi|166226797|sp|A1RC70|RS6_ARTAT RecName: Full=30S ribosomal protein S6
gi|119949052|gb|ABM07963.1| ribosomal protein S6 [Arthrobacter aurescens TC1]
Length = 101
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 52/88 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVESSLQKFLNVITTDGGTIEKVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + PA E+ R++ ++E ++R+
Sbjct: 61 AVVNFTAAPATAKELDRQLSLNETIMRT 88
>gi|303326564|ref|ZP_07357007.1| ribosomal protein S6 [Desulfovibrio sp. 3_1_syn3]
gi|302864480|gb|EFL87411.1| ribosomal protein S6 [Desulfovibrio sp. 3_1_syn3]
Length = 102
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + ++I+ GG + V+ GMR +AY + K + YY
Sbjct: 1 MRKFETLLLLSPELSAENREGILNALVAIIEREGGVMTEVDHWGMRDLAYPVHKLMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + +P A + E++R +RI + + + +T+
Sbjct: 61 VRLVYDAPAALVAELERNIRITDGIFKFVTV 91
>gi|257439410|ref|ZP_05615165.1| ribosomal protein S6 [Faecalibacterium prausnitzii A2-165]
gi|257198069|gb|EEU96353.1| ribosomal protein S6 [Faecalibacterium prausnitzii A2-165]
Length = 94
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G++++LI EN G + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEATAALVGKFKTLI-ENNGTIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+N S P+ E+ R +I E V+RSL + +HE+
Sbjct: 60 TVINFTSEPSFPAELDRVYKITEGVMRSLIV---AHEE 94
>gi|218886446|ref|YP_002435767.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226703454|sp|B8DRL2|RS6_DESVM RecName: Full=30S ribosomal protein S6
gi|218757400|gb|ACL08299.1| ribosomal protein S6 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 101
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + +G +++ G++ + GMR +AY ++K+ + YY
Sbjct: 1 MRKFETLLLLSPELAADAREALLGTLTGVVEREQGKMVAADHWGMRDLAYPVQKHMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQ 98
V + +P A+ E++R +RI + + + +T+ L D+ E+
Sbjct: 61 VRLEYLAPGEAVAEVERNIRISDGIFKFVTVKLADAVEE 99
>gi|109900047|ref|YP_663302.1| ribosomal protein S6 [Pseudoalteromonas atlantica T6c]
gi|109702328|gb|ABG42248.1| SSU ribosomal protein S6P [Pseudoalteromonas atlantica T6c]
Length = 135
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ +NGG + + + G R +AY I K KA+Y
Sbjct: 2 MRHYEIVFMVHPD-QSEQVPGMIERYTGILTQNGGTIHRMEDWGRRQLAYPIDKLHKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
V +N + A+ E++ R ++ VLR+L + EQSP
Sbjct: 61 VLINAEASAEAVEELETAFRFNDVVLRNLVMRTKDAETEQSP 102
>gi|167760813|ref|ZP_02432940.1| hypothetical protein CLOSCI_03198 [Clostridium scindens ATCC
35704]
gi|167661700|gb|EDS05830.1| hypothetical protein CLOSCI_03198 [Clostridium scindens ATCC
35704]
Length = 95
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 1 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGKISDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S E+++++RI +NVLR L +
Sbjct: 61 YFIHFESESDVPGEIEQRIRIMDNVLRYLCV 91
>gi|162455219|ref|YP_001617586.1| hypothetical protein sce6937 [Sorangium cellulosum 'So ce 56']
gi|161165801|emb|CAN97106.1| rpsF [Sorangium cellulosum 'So ce 56']
Length = 179
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI + + + ++ G + V G R +AY I K+R+ YV++
Sbjct: 14 YETIYILRPDIDADGAERIGSRLAEVVGRESGRLTKVETWGRRRLAYDIAKHRRGVYVYL 73
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-----------RDDR 112
+ E++R +R+ + VL+ T+LV + + +TI D DDR
Sbjct: 74 KYLGGGKVVSEVERNLRLSDGVLKYQTVLVRNDVEVEGVTIADEDVKFERLELAPLEDDR 133
Query: 113 NDRFPR-------DRNVDRKQHVSEEKP 133
+D R +R +DR SE+ P
Sbjct: 134 DDSRERQLGLIEPERRIDRS---SEQAP 158
>gi|298372705|ref|ZP_06982695.1| ribosomal protein S6 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275609|gb|EFI17160.1| ribosomal protein S6 [Bacteroidetes oral taxon 274 str. F0058]
Length = 135
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE F+L +S Q+K+ + +++ ++ + G + G+R +AY I K +YV +
Sbjct: 5 YEAAFILTPVLSDVQMKEAVEKFKVVLTDAGATIENEELWGLRKLAYTIDKKSTGFYVIL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P + ++ + R DE V+R L +D +
Sbjct: 65 QFSGEPTLVETLETQFRRDERVIRFLVFRLDKY 97
>gi|313891894|ref|ZP_07825496.1| ribosomal protein S6 [Dialister microaerophilus UPII 345-E]
gi|329121956|ref|ZP_08250569.1| 30S ribosomal protein S6 [Dialister micraerophilus DSM 19965]
gi|313119669|gb|EFR42859.1| ribosomal protein S6 [Dialister microaerophilus UPII 345-E]
gi|327467402|gb|EGF12901.1| 30S ribosomal protein S6 [Dialister micraerophilus DSM 19965]
Length = 94
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQ-YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE +F+++ +S ++ + G+ Q I +NGG V V+E G R +AY ++K + Y
Sbjct: 1 MNKYEVMFIVK--VSDEEAIKSAGKLVQDTIVKNGGTVEKVDEWGRRQLAYEVKKQTEGY 58
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y ++ P I E+ R ++I E+++R + +
Sbjct: 59 YFVIDFTMKPENIKELDRVIKIRESIIRHIIV 90
>gi|145341069|ref|XP_001415638.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
gi|144575861|gb|ABO93930.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
Length = 126
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LY+ + ++ + D + + + + + GG V V G RT+AY R K+
Sbjct: 1 MVLYDAMIVVSAKVPKTACADVLRRLGASVMDAGGVVTNVASYGARTLAYEFRRPGEKHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+A +V M+ +PP + E +R +RIDE VLR +
Sbjct: 61 EAQFVKMSFNAPPTLVAEAERTLRIDERVLRWV 93
>gi|91204545|emb|CAJ70773.1| similar to 30S ribosomal subunit protein S6 [Candidatus Kuenenia
stuttgartiensis]
Length = 137
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE +FL+ ++ + ++ +NG E+ + G + +AY+I+ +++ Y
Sbjct: 1 MRLYEGLFLIDNVPANSDWDGVVKSIHDILAKNGAEILKTEKWGEKKLAYKIKSHKRGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ ++ + +I +MKR ++ E ++RSL L E+ I+ D ++ P+
Sbjct: 61 LLIHFNAENTSITQMKRDFQLSEFLIRSLILRDTVIEELSAAGIEEGFSDKEAEKEPKTE 120
Query: 121 NV 122
V
Sbjct: 121 EV 122
>gi|54027546|ref|YP_121788.1| 30S ribosomal protein S6 [Nocardia farcinica IFM 10152]
gi|61215419|sp|Q5YN17|RS6_NOCFA RecName: Full=30S ribosomal protein S6
gi|54019054|dbj|BAD60424.1| putative ribosomal protein S6 [Nocardia farcinica IFM 10152]
Length = 95
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ +++ GG++ V+ G R +AY IRK + Y
Sbjct: 1 MRHYEVMVILDPSLDERTVGPSLENMLGVVKTEGGKIDKVDIWGRRRLAYEIRKQAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + PA ++E+ R++ ++E+VLR+ L
Sbjct: 61 AVIDLTASPATVNELDRQLGLNESVLRTKVL 91
>gi|332881933|ref|ZP_08449575.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680168|gb|EGJ53123.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 113
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIKEAVEKFENFLTSRGAEFVSKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKH 96
>gi|311897279|dbj|BAJ29687.1| putative ribosomal protein S6 [Kitasatospora setae KM-6054]
Length = 96
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + I + ++++ GG++ ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPSVEERAVSPLIESFLNVVRTGGGKIEKIDTWGRRRLAYEINKQSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P + E+ R+ + E+VLR+ L D+H
Sbjct: 61 SVIDLKATPEVVKELDRQFSLSESVLRTKVLRPDTH 96
>gi|307543250|gb|ADN44265.1| ribosomal protein S6 [Pseudomonas syringae]
Length = 78
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMK 76
V +N+ A+ E++
Sbjct: 60 VMLNVECTGKALAELE 75
>gi|57234185|ref|YP_181762.1| 30S ribosomal protein S6 [Dehalococcoides ethenogenes 195]
gi|91207912|sp|Q3Z7N7|RS6_DEHE1 RecName: Full=30S ribosomal protein S6
gi|57224633|gb|AAW39690.1| ribosomal protein S6 [Dehalococcoides ethenogenes 195]
Length = 109
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V +L D ++++ + I E G VN G R +AY I + + YYVF+
Sbjct: 17 YELVVILTTDTPKEKVEAILEGISKTIAEKDGSFTEVNHWGKRKLAYLIGRYGEGYYVFI 76
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + P++I ++ +RI E V+R + + +D
Sbjct: 77 KMKAKPSSIRKINADLRISEQVIRHMAINMD 107
>gi|16330273|ref|NP_441001.1| 30S ribosomal protein S6 [Synechocystis sp. PCC 6803]
gi|2500413|sp|P73636|RS6_SYNY3 RecName: Full=30S ribosomal protein S6
gi|1652762|dbj|BAA17681.1| 30S ribosomal protein S6 [Synechocystis sp. PCC 6803]
Length = 113
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +LR D++ +++ + +YQ + N E V G R +AY+IR+ YV
Sbjct: 6 YELMVILRPDLNEERVSQEVTKYQEFLTNNAAEEVSVKVWGKRRLAYQIRRFNDGIYVLF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N I ++R MR+++NV+R L++
Sbjct: 66 NFNGEGQQIALIERDMRLNDNVMRFLSI 93
>gi|11467648|ref|NP_050700.1| ribosomal protein S6 [Guillardia theta]
gi|6094139|sp|O78447|RR6_GUITH RecName: Full=30S ribosomal protein S6, chloroplastic
gi|3602973|gb|AAC35634.1| ribosomal protein S6 [Guillardia theta]
Length = 96
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++++ +++ + I YQ L+ E G + + G RT+ Y I+K + A+YV M
Sbjct: 7 YETLYIVKPELTEDSLAKLIESYQGLLLERGAKNIITQNRGRRTLKYMIKKYKDAHYVQM 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
N I ++R M+I+E+++R LT
Sbjct: 67 NYEGNGEVIQLLERAMKINESIVRFLT 93
>gi|303228730|ref|ZP_07315550.1| ribosomal protein S6 [Veillonella atypica ACS-134-V-Col7a]
gi|303231522|ref|ZP_07318251.1| ribosomal protein S6 [Veillonella atypica ACS-049-V-Sch6]
gi|302513768|gb|EFL55781.1| ribosomal protein S6 [Veillonella atypica ACS-049-V-Sch6]
gi|302516604|gb|EFL58526.1| ribosomal protein S6 [Veillonella atypica ACS-134-V-Col7a]
Length = 94
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V ++ + + I + ++LI GG V V+ G R +AY ++K +Y
Sbjct: 1 MNKYE-VMVIVKPAEEEATNAVIEKVEALIARVGGTVEKVDRWGKRRLAYAVKKFTDGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + PA I E+ R ++I+++VLR L +
Sbjct: 60 VLVNFEADPAEIKEIDRVLKINDDVLRHLIV 90
>gi|331091913|ref|ZP_08340745.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330402812|gb|EGG82379.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 95
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I +TI + + +I GG V V+E G R +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKIEDDARTETIEKVKEIIARFGGNVTDVDEWGKRRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E++ ++RI ENV+R L + D+
Sbjct: 61 YFIHFESDSTVPAEVESRLRIMENVIRFLCIRQDA 95
>gi|260905001|ref|ZP_05913323.1| ribosomal protein S6 [Brevibacterium linens BL2]
Length = 96
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + DT+ + ++ G V V+ G R AY I+K + +Y
Sbjct: 1 MRHYELMLILDNETDERTLADTVDKLMKVVPAENGTVDNVDIWGRRRFAYDIQKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ + PA E+ R++ ++E+VLR+ L D+
Sbjct: 61 VVVDFHAEPATTKELDRQLGLNESVLRTKILRPDA 95
>gi|312792726|ref|YP_004025649.1| 30S ribosomal protein S6 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877714|ref|ZP_07737668.1| ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795515|gb|EFR11890.1| ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
gi|312179866|gb|ADQ40036.1| ribosomal protein S6 [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + + ++++LI NG ++ V E G R +AY+I K+ + YYV M
Sbjct: 6 YETVFIISPTLDDEARNALVEKFKNLISSNG-QLLTVEEWGKRRLAYKIDKHAEGYYVLM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R L +
Sbjct: 65 QFISKPEFPRELERVYRITDGVIRFLIV 92
>gi|312621640|ref|YP_004023253.1| 30S ribosomal protein S6 [Caldicellulosiruptor kronotskyensis
2002]
gi|312202107|gb|ADQ45434.1| ribosomal protein S6 [Caldicellulosiruptor kronotskyensis 2002]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + I ++++LI NG ++ V E G R +AY+I K+ + YYV M
Sbjct: 6 YETVFIISPTLDDEARNSLIEKFKNLISSNG-QLLNVEEWGKRRLAYKIDKHAEGYYVLM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R L +
Sbjct: 65 QFISKPEFPRELERVYRITDGVIRFLIV 92
>gi|194335286|ref|YP_002017080.1| ribosomal protein S6 [Pelodictyon phaeoclathratiforme BU-1]
gi|226695110|sp|B4SB42|RS6_PELPB RecName: Full=30S ribosomal protein S6
gi|194307763|gb|ACF42463.1| ribosomal protein S6 [Pelodictyon phaeoclathratiforme BU-1]
Length = 134
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I+K YY
Sbjct: 5 KLYECTLIIDGGLQDEAIAAAMALVQRVITEKGGSISSVLEIGRRKTAYPIKKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + I E+++ +R +E++LR L +
Sbjct: 65 HIEFTAATSVIAEVEKVIRYEEDLLRYLII 94
>gi|314985955|gb|EFT30047.1| ribosomal protein S6 [Propionibacterium acnes HL005PA2]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R AY I+K + Y
Sbjct: 1 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRPAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +N PA I E+ R + IDE ++R+
Sbjct: 61 VVVNATCEPATIQELDRLLAIDEKIMRT 88
>gi|293400275|ref|ZP_06644421.1| ribosomal protein S6 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306675|gb|EFE47918.1| ribosomal protein S6 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 100
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + +I ++ G + V+E G++ AY I+ K YY
Sbjct: 4 MKKYEIMYIVNASLEDAARTKVMDGLHKIITDHNGTIDQVDEWGVKEFAYEIKHMNKGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ + IHE R RI+ N++R + +
Sbjct: 64 VVINVTANNEGIHEFDRLARINHNIVRYMIV 94
>gi|302872493|ref|YP_003841129.1| ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|312126894|ref|YP_003991768.1| 30S ribosomal protein S6 [Caldicellulosiruptor hydrothermalis
108]
gi|302575352|gb|ADL43143.1| ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|311776913|gb|ADQ06399.1| ribosomal protein S6 [Caldicellulosiruptor hydrothermalis 108]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF++ + + + ++++LI NG ++ V E G R +AY+I K+ + YYV M
Sbjct: 6 YETVFIISPALDDEARAALVEKFKNLISSNG-QLLTVEEWGKRRLAYKIDKHAEGYYVLM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S P E++R RI + V+R L +
Sbjct: 65 QFISKPEFPRELERVYRITDGVIRFLIV 92
>gi|187934196|ref|YP_001887721.1| 30S ribosomal protein S6 [Clostridium botulinum B str. Eklund
17B]
gi|188589519|ref|YP_001922704.1| 30S ribosomal protein S6 [Clostridium botulinum E3 str. Alaska
E43]
gi|251780573|ref|ZP_04823493.1| 30S ribosomal protein S6 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|187722349|gb|ACD23570.1| 30S ribosomal protein S6 [Clostridium botulinum B str. Eklund
17B]
gi|188499800|gb|ACD52936.1| 30S ribosomal protein S6 [Clostridium botulinum E3 str. Alaska
E43]
gi|243084888|gb|EES50778.1| 30S ribosomal protein S6 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + +K I +++ +I+ GG + V+ G R +AY I K YY
Sbjct: 2 MRKYETIFIQHPSFDEETVKTNIEKFKGVIENGGGTIENVDFWGKRKLAYEISKVSDGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + P E+ R RI + ++R + +
Sbjct: 62 TLVSFNAGPELPKELDRVFRITDGIIRHIIV 92
>gi|255530651|ref|YP_003091023.1| 30S ribosomal protein S6 [Pedobacter heparinus DSM 2366]
gi|255343635|gb|ACU02961.1| ribosomal protein S6 [Pedobacter heparinus DSM 2366]
Length = 119
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V +L +S + K+ I ++ +I ++G E+ + G+R +AY I K ++
Sbjct: 1 MNQYETVIVLTPLLSEEVAKEAIAKFSKIIADSGAEIVQEDNWGLRKLAYPIEKKASGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
S I++++ +++ DE VLR LT+ +D H
Sbjct: 61 HLTEYKSSGELINKLELELKRDERVLRFLTIRLDRH 96
>gi|270308307|ref|YP_003330365.1| ribosomal protein S6 [Dehalococcoides sp. VS]
gi|270154199|gb|ACZ62037.1| ribosomal protein S6 [Dehalococcoides sp. VS]
Length = 109
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V +L D ++++ + I E G VN G R +AY I + + YYVF+
Sbjct: 17 YELVVILTTDTPKEKVEAILEGISKTIAEKEGSFTEVNHWGKRKLAYLIGRYGEGYYVFI 76
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + P++I ++ +RI E V+R + + +D
Sbjct: 77 KMKAKPSSIRKINSDLRISEQVIRHMAINMD 107
>gi|270160071|ref|ZP_06188727.1| ribosomal protein S6 [Legionella longbeachae D-4968]
gi|289165148|ref|YP_003455286.1| 30S ribosomal protein S6 [Legionella longbeachae NSW150]
gi|269988410|gb|EEZ94665.1| ribosomal protein S6 [Legionella longbeachae D-4968]
gi|288858321|emb|CBJ12189.1| 30S ribosomal protein S6 [Legionella longbeachae NSW150]
Length = 112
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y+ +I ++ G + +LG R +AY I KA+Y
Sbjct: 1 MRHYEIMFLVHPD-QSEQVPAMVERYEGIISKHNGVIHRKEDLGRRQLAYPICDVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+ MNI A+ E+K + ++ ++R+L
Sbjct: 60 ILMNIECSLEALEEIKNAFKYNDAIIRNL 88
>gi|262197681|ref|YP_003268890.1| ribosomal protein S6 [Haliangium ochraceum DSM 14365]
gi|262081028|gb|ACY16997.1| ribosomal protein S6 [Haliangium ochraceum DSM 14365]
Length = 210
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 53/92 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR ++ + + + + +++ GG+V V+ G R +AY I+K RK Y+
Sbjct: 25 YETIYILRPGTTNDGVAEVNTRVRGIVENMGGKVLQVDNWGKRRLAYEIQKERKGIYLHW 84
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I E++R +R+ + V+R +T+ +D+
Sbjct: 85 QFLATRGVIDEVERNLRMLDAVVRYMTIKLDA 116
>gi|160944122|ref|ZP_02091352.1| hypothetical protein FAEPRAM212_01624 [Faecalibacterium
prausnitzii M21/2]
gi|158444798|gb|EDP21802.1| hypothetical protein FAEPRAM212_01624 [Faecalibacterium
prausnitzii M21/2]
gi|295105041|emb|CBL02585.1| SSU ribosomal protein S6P [Faecalibacterium prausnitzii SL3/3]
Length = 94
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G+++SLI+ NG + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEASAALVGKFKSLIEANG-TIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+N S P+ E+ R +I E V+RSL + +HE+
Sbjct: 60 TVINFTSEPSFPAELDRVYKITEGVMRSLII---AHEE 94
>gi|254448153|ref|ZP_05061616.1| ribosomal protein S6 [gamma proteobacterium HTCC5015]
gi|198262279|gb|EDY86561.1| ribosomal protein S6 [gamma proteobacterium HTCC5015]
Length = 94
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y+++I E GG + + G R +AY I K KA+YV MN+ + + E+ R +
Sbjct: 2 IERYRAII-EQGGNIHRQEDWGRRQLAYPINKIHKAHYVLMNVECEQSVLDELTSTFRFN 60
Query: 83 ENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ ++R++ + +D P+ + D+DD D
Sbjct: 61 DAIIRNMVVQLDEAVTEPSPLAKSSDKDDSAD 92
>gi|152968282|ref|YP_001364066.1| ribosomal protein S6 [Kineococcus radiotolerans SRS30216]
gi|151362799|gb|ABS05802.1| ribosomal protein S6 [Kineococcus radiotolerans SRS30216]
Length = 98
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 51/85 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L ++ + + ++ ++ +++++ GGEV V+ G R +AY I+K + Y +
Sbjct: 6 YELMVILDAELEERTVAPSLDRFLNVVRQGGGEVGKVDIWGRRRLAYDIKKKSEGIYAVI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
+ + PA E+ R++ ++E VLR+
Sbjct: 66 ELNTEPAVAQELDRQLNLNEGVLRT 90
>gi|229816200|ref|ZP_04446510.1| hypothetical protein COLINT_03247 [Collinsella intestinalis DSM
13280]
gi|229808208|gb|EEP44000.1| hypothetical protein COLINT_03247 [Collinsella intestinalis DSM
13280]
Length = 97
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + + I E G+V V+E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPSLDPETRLAVMKRIDNTIAEGNGKVDNVDEWGKRKLAYEIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + PA+I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPASIAELDRVLRITDAVIRHMIVRRDDQE 97
>gi|118470162|ref|YP_891097.1| 30S ribosomal protein S6 [Mycobacterium smegmatis str. MC2 155]
gi|302595892|sp|A0R7F9|RS6_MYCS2 RecName: Full=30S ribosomal protein S6
gi|118171449|gb|ABK72345.1| ribosomal protein S6 [Mycobacterium smegmatis str. MC2 155]
Length = 90
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 53/90 (58%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y +++
Sbjct: 1 MVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIYAVIDVK 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ PA + E+ R++ ++E+VLR+ L D H
Sbjct: 61 AEPATVSELDRQLNLNESVLRTKVLRTDKH 90
>gi|73748808|ref|YP_308047.1| 30S ribosomal protein S6 [Dehalococcoides sp. CBDB1]
gi|147669569|ref|YP_001214387.1| 30S ribosomal protein S6 [Dehalococcoides sp. BAV1]
gi|289432829|ref|YP_003462702.1| ribosomal protein S6 [Dehalococcoides sp. GT]
gi|91207913|sp|Q3ZY12|RS6_DEHSC RecName: Full=30S ribosomal protein S6
gi|73660524|emb|CAI83131.1| ribosomal protein S6 [Dehalococcoides sp. CBDB1]
gi|146270517|gb|ABQ17509.1| SSU ribosomal protein S6P [Dehalococcoides sp. BAV1]
gi|288946549|gb|ADC74246.1| ribosomal protein S6 [Dehalococcoides sp. GT]
Length = 109
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V +L D ++++ + I E G VN G R +AY I + + YYVF+
Sbjct: 17 YELVVILTTDTPKEKVEAILEGISKTIAEKEGSFTEVNHWGKRKLAYLIGRYVEGYYVFI 76
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + P++I ++ +RI E V+R + + +D
Sbjct: 77 KMKAKPSSIRKISTDLRISEQVIRHMAINMD 107
>gi|167773046|ref|ZP_02445099.1| hypothetical protein ANACOL_04435 [Anaerotruncus colihominis DSM
17241]
gi|167664979|gb|EDS09109.1| hypothetical protein ANACOL_04435 [Anaerotruncus colihominis DSM
17241]
Length = 117
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V +L + + + ++ +LI +N E+ V+ G R +AY + YYV +
Sbjct: 8 YETVMVLSMKNGEEGVNTLVEKFNTLIADNA-EITKVDTWGQRALAYPMNDETVGYYVVI 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
N S P E+ R +I + VLRSL + + E+ P
Sbjct: 67 NFTSKPDFPAELDRIYKITDGVLRSLIVAKEPEEEKPA 104
>gi|327200752|pdb|3R3T|A Chain A, Crystal Structure Of 30s Ribosomal Protein S From
Bacillus Anthracis
gi|327200753|pdb|3R3T|B Chain B, Crystal Structure Of 30s Ribosomal Protein S From
Bacillus Anthracis
Length = 99
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y +
Sbjct: 7 YEIXYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYXIL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ + AI+E R +I+E++LR + +
Sbjct: 67 NVNANAEAINEFDRLAKINEDILRHIVV 94
>gi|255326496|ref|ZP_05367578.1| ribosomal protein S6 [Rothia mucilaginosa ATCC 25296]
gi|255296536|gb|EET75871.1| ribosomal protein S6 [Rothia mucilaginosa ATCC 25296]
Length = 101
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG V V+ G R +AY I+K + Y
Sbjct: 1 MRAYELMVILSPEVEDRAVEPSLSKFLEIVTNEGGSVDNVDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N S P E+ R + ++E+V+R+
Sbjct: 61 AVVNFTSTPETAAELDRVLNLNESVMRT 88
>gi|262204544|ref|YP_003275752.1| 30S ribosomal protein S6 [Gordonia bronchialis DSM 43247]
gi|262087891|gb|ACY23859.1| ribosomal protein S6 [Gordonia bronchialis DSM 43247]
Length = 93
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 56/91 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ + ++++ +GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPNLDERTVAPSLDTFLNVVRNDGGKVDGVDIWGKRRLAYEIAKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++ + P + E+ R+++++E+VLR+ L
Sbjct: 61 AVIDLNAEPKTVTELDRQLKLNESVLRTKVL 91
>gi|88803225|ref|ZP_01118751.1| 30S ribosomal protein S6 [Polaribacter irgensii 23-P]
gi|88780791|gb|EAR11970.1| 30S ribosomal protein S6 [Polaribacter irgensii 23-P]
Length = 113
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ ++ + G E+ + G++ +AY I+K + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIKETVQKFNDYLVSRGAEMISKEDWGLKKLAYPIQKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ I + + R D++V+R L++ +D H +
Sbjct: 61 HLLEYKVAGEEISAFELEFRRDDSVMRYLSIRLDKHAAA 99
>gi|118602662|ref|YP_903877.1| 30S ribosomal protein S6 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166227378|sp|A1AWU9|RS6_RUTMC RecName: Full=30S ribosomal protein S6
gi|118567601|gb|ABL02406.1| SSU ribosomal protein S6P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 113
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I GG++ + G + +AY I+K KA+Y
Sbjct: 1 MRHYEITLIVHPD-QSAQVGTMMEKYKEIITTGGGKIHRKEDWGRKHLAYPIKKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+ MNI + ++ R ++ +LR+L + D +P++ + D++
Sbjct: 60 LMMNIECDQEVLDKLNYNFRFNDAILRNLIISEDGVITTPSIMMANKDKE 109
>gi|158319029|ref|YP_001511537.1| 30S ribosomal protein S6 [Frankia sp. EAN1pec]
gi|158114434|gb|ABW16631.1| ribosomal protein S6 [Frankia sp. EAN1pec]
Length = 108
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 53/85 (62%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L ++ + + ++ QY +++++ GG V V+ G R ++Y I K+ + Y +
Sbjct: 5 YELMVILDSELEERTVAPSLDQYLNVVRQGGGVVEKVDVWGRRRLSYEIAKSFEGIYAVI 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
++ + PA + E+ R++ ++E+V+R+
Sbjct: 65 DLHTEPAVVAELDRQLVLNESVIRT 89
>gi|257065995|ref|YP_003152251.1| 30S ribosomal protein S6 [Anaerococcus prevotii DSM 20548]
gi|256797875|gb|ACV28530.1| ribosomal protein S6 [Anaerococcus prevotii DSM 20548]
Length = 94
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ + + + +++ +I ++G EV V++ G R +AY I ++ YY
Sbjct: 1 MNKYEAVLIFKADMADSERESLLDRFKDIIGQDG-EVTNVDDWGKRKLAYEINDLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ S P I E +R++R+ + V+R + +
Sbjct: 60 YIVDFDSNPDHIKEFERRLRLSDFVIRYMVI 90
>gi|15617155|ref|NP_240368.1| 30S ribosomal protein S6 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681906|ref|YP_002468292.1| 30S ribosomal protein S6 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682461|ref|YP_002468845.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471612|ref|ZP_05635611.1| 30S ribosomal protein S6 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387064|sp|P57627|RS6_BUCAI RecName: Full=30S ribosomal protein S6
gi|254765225|sp|B8D8C8|RS6_BUCA5 RecName: Full=30S ribosomal protein S6
gi|254765226|sp|B8D885|RS6_BUCAT RecName: Full=30S ribosomal protein S6
gi|25294551|pir||F84995 30S ribosomal protein S6 [imported] - Buchnera sp. (strain APS)
gi|10039220|dbj|BAB13254.1| 30S ribosomal protein S6 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622194|gb|ACL30350.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624749|gb|ACL30904.1| 30S ribosomal protein S6 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086284|gb|ADP66366.1| 30S ribosomal protein S6 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086860|gb|ADP66941.1| 30S ribosomal protein S6 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087448|gb|ADP67528.1| 30S ribosomal protein S6 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087936|gb|ADP68015.1| 30S ribosomal protein S6 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 113
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S +I I +Y+ +I +N G + + + G R ++Y I K +KA+Y
Sbjct: 1 MRHYEIIFMVHPD-QSDKIPLLIEKYKKIINDNNGIIHRLEDWGRRQLSYSINKLQKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ MNI P I ++ R + +LR++ + V
Sbjct: 60 ILMNIEVFPKTITLLETDFRFNNIILRNMIMSV 92
>gi|237757032|ref|ZP_04585484.1| ribosomal protein S6 [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690812|gb|EEP59968.1| ribosomal protein S6 [Sulfurihydrogenibium yellowstonense SS-5]
Length = 104
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S ++IK + + LIQ+N GE+ G R +AY I K YY
Sbjct: 1 MRHYELVFVLKPTLSEEEIKTRVQAIRDLIQQNQGEIYNEENWGRRNLAYPINKFNSGYY 60
Query: 61 VFMNIASPPAAIHE-MKRKMRIDENVLRSLTL 91
+N + + + ++ +RI+E+V+R L +
Sbjct: 61 FLINYKTGNSNLPAILEYNLRINEDVIRFLNM 92
>gi|329944678|ref|ZP_08292788.1| ribosomal protein S6 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530092|gb|EGF56978.1| ribosomal protein S6 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 95
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E VLR+
Sbjct: 61 VVVDMTTTPETAQELDRQLGLNETVLRT 88
>gi|325479873|gb|EGC82958.1| ribosomal protein S6 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 94
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ ++ + +++ +I ++G EV V++ G R +AY I + YY
Sbjct: 1 MNKYEAVLIFKADMNDSDRENLLDRFKEIIGQDG-EVTNVDDWGKRKLAYEINDLKDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ S P I E +R++R+ ++++R + +
Sbjct: 60 YIVDFDSNPDHIKEFERRLRLSDSIIRYMVI 90
>gi|148244752|ref|YP_001219446.1| 30S ribosomal protein S6 [Candidatus Vesicomyosocius okutanii HA]
gi|166227401|sp|A5CWD9|RS6_VESOH RecName: Full=30S ribosomal protein S6
gi|146326579|dbj|BAF61722.1| 30S ribosomal protein S6 [Candidatus Vesicomyosocius okutanii HA]
Length = 113
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I +GG++ + G + +AY I+K KA+Y
Sbjct: 1 MRHYEITLIVHPD-QSAQVGTMMDKYKEIINADGGKIHKEEDWGRKHLAYPIKKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+ MNI + ++ R ++ +LRSL + + +P++ + D++
Sbjct: 60 LMMNIECDQEMLDKLNYNFRFNDAILRSLIISKNKAITTPSIMMVNKDKE 109
>gi|308048248|ref|YP_003911814.1| 30S ribosomal protein S6P [Ferrimonas balearica DSM 9799]
gi|307630438|gb|ADN74740.1| SSU ribosomal protein S6P [Ferrimonas balearica DSM 9799]
Length = 130
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q++ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVQGMIERYTATIEKDGGKIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + A+ E++ R ++ V+RS+ +
Sbjct: 60 VLVNAEATAEAVAELETNFRYNDAVIRSMVI 90
>gi|220905286|ref|YP_002480598.1| 30S ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254765235|sp|B8J3B0|RS6_DESDA RecName: Full=30S ribosomal protein S6
gi|219869585|gb|ACL49920.1| ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 102
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + + +I+ G + V+ GMR +AY +RK + YY
Sbjct: 1 MRKFETLLLLSPELSAENREGVVSTFTGIIEREKGVMEEVDNWGMRDLAYPVRKLMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + P + E++R +R+ + V + +T+
Sbjct: 61 VRLVYQGPAPLVAELERNIRMTDGVFKFVTV 91
>gi|71275196|ref|ZP_00651483.1| Ribosomal protein S6 [Xylella fastidiosa Dixon]
gi|71898276|ref|ZP_00680450.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|170731187|ref|YP_001776620.1| 30S ribosomal protein S6 [Xylella fastidiosa M12]
gi|226705651|sp|B0U5H2|RS6_XYLFM RecName: Full=30S ribosomal protein S6
gi|71164005|gb|EAO13720.1| Ribosomal protein S6 [Xylella fastidiosa Dixon]
gi|71732015|gb|EAO34072.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|167965980|gb|ACA12990.1| 30S ribosomal protein S6 [Xylella fastidiosa M12]
Length = 143
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V L+ D S+Q++ + +Y++LI+ G++ + + G R +AY I+K KA+Y+ M
Sbjct: 5 YEIVLLVHPD-QSEQVQAMLERYKALIENGHGKIHRLEDWGRRQLAYPIQKLVKAHYLMM 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
NI + ++E+ R ++ +LR L + + ++ +DD+ D+ R R D
Sbjct: 64 NIEVEQSVLNELVDLFRFNDAILRHLAIKRSGPYTEQSFIMKS--KDDKGDKPERRRRDD 121
>gi|254526151|ref|ZP_05138203.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9202]
gi|221537575|gb|EEE40028.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9202]
Length = 143
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 52/85 (61%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV ++
Sbjct: 1 MYILRPDIAEDEVTNHIDKYNKLLEEFGGSILDSQMRGKRRLAYQIAKHREGIYVQLSHQ 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
I ++++ MR+ E+V+R +T+
Sbjct: 61 GDGQHIFKIEKAMRLSEDVIRYMTV 85
>gi|283458979|ref|YP_003363628.1| 30S ribosomal protein S6 [Rothia mucilaginosa DY-18]
gi|283135043|dbj|BAI65808.1| ribosomal protein S6 [Rothia mucilaginosa DY-18]
Length = 120
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG V V+ G R +AY I+K + Y
Sbjct: 20 MRAYELMVILSPEVEDRAVEPSLSKFLEIVTNEGGSVDNVDIWGRRRLAYEIQKKSEGIY 79
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N S P E+ R + ++E+V+R+
Sbjct: 80 AVVNFTSTPETAAELDRVLNLNESVMRT 107
>gi|40062774|gb|AAR37668.1| ribosomal protein S6 [uncultured marine bacterium 439]
Length = 117
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D SSQ + I +Y+ +I +GG V + G + +AY I K KA+Y
Sbjct: 1 MRHYEITLIVHPDQSSQ-VTTMIEKYKEIITTSGGNVHREEDWGRKHLAYPINKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+ MNI + ++ R ++ +LR+L + +P++ I + D
Sbjct: 60 LMMNIECDQETLDKLNYNFRFNDAILRNLIISKSEAITTPSIMIANSEED 109
>gi|46579369|ref|YP_010177.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603073|ref|YP_967473.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris DP4]
gi|61215612|sp|Q72DH3|RS6_DESVH RecName: Full=30S ribosomal protein S6
gi|166226826|sp|A1VF30|RS6_DESVV RecName: Full=30S ribosomal protein S6
gi|46448783|gb|AAS95436.1| ribosomal protein S6 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563302|gb|ABM29046.1| SSU ribosomal protein S6P [Desulfovibrio vulgaris DP4]
gi|311233194|gb|ADP86048.1| ribosomal protein S6 [Desulfovibrio vulgaris RCH1]
Length = 101
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + + +++ G + + GMR +AY +RK + YY
Sbjct: 1 MRKFETLLLLSPELAADAREALLTTLSGVVEREQGSMITADHWGMRDLAYPVRKQMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQ 98
V + +P A + E++R +RI + + + +T+ L D+ E+
Sbjct: 61 VRLEYTAPGATVAELERIIRISDGIFKFVTVKLADAVEE 99
>gi|295100598|emb|CBK98143.1| SSU ribosomal protein S6P [Faecalibacterium prausnitzii L2-6]
Length = 94
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + IG+++SLI+ NG + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEASSALIGKFKSLIEANG-TIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+N + P+ E+ R +I E V+RSL + +HE+
Sbjct: 60 TVINFTADPSFPAELDRVYKITEGVMRSLIV---AHEE 94
>gi|300087859|ref|YP_003758381.1| 30S ribosomal protein S6 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527592|gb|ADJ26060.1| ribosomal protein S6 [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 106
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V + RQ++S +++ + I +GG V V++ G R +AY I++ + Y+
Sbjct: 15 YELVVIYRQEMSQEKLDSAVKFITDAITSSGGAVEAVDKWGKRKLAYPIKQQLEGVYILF 74
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + I ++ ++RI ENVLR + +
Sbjct: 75 KFQAGSSLIRKISDELRISENVLRHMAI 102
>gi|299541783|ref|ZP_07052106.1| 30S ribosomal protein S6 [Lysinibacillus fusiformis ZC1]
gi|298725521|gb|EFI66162.1| 30S ribosomal protein S6 [Lysinibacillus fusiformis ZC1]
Length = 95
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ ++ NG EV E G R +AY I+ R+ YY
Sbjct: 1 MRKYELMYIVRPNIEDEAKKALVERFNEMLTSNGAEVIESKEWGKRRLAYEIKDFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + AI+E R I E+++R + +
Sbjct: 61 QIVKVNATSDAINEYTRLANISEDIIRHIAV 91
>gi|145218997|ref|YP_001129706.1| 30S ribosomal protein S6 [Prosthecochloris vibrioformis DSM 265]
gi|189045487|sp|A4SCJ5|RS6_PROVI RecName: Full=30S ribosomal protein S6
gi|145205161|gb|ABP36204.1| SSU ribosomal protein S6P [Chlorobium phaeovibrioides DSM 265]
Length = 133
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + + Q +I E GG ++ V ++G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEPIAEAMAMVQKVITEKGGSIKSVLDIGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + I E++R +R ++ +LR L + H +P L +++
Sbjct: 65 HIEFTADTPVIAEIERVLRYEDVLLRYLII----HLTTPLLEMRK 105
>gi|163783214|ref|ZP_02178208.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881548|gb|EDP75058.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
Length = 113
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAY 59
++ YE VF+L+ + +++K + + I+ GGE+ + G +T+AYRI N Y
Sbjct: 10 VRFYETVFVLKPTFTEEEVKQKAEEIKKFIESKGGEILHFQDWGTKTLAYRIENFNHGRY 69
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ P +E+ + +I+E+++R L + E
Sbjct: 70 FLVQYKTENPELPNELDFQFKINEDIIRWLNFQIKESE 107
>gi|87123366|ref|ZP_01079217.1| ribosomal protein S6 [Synechococcus sp. RS9917]
gi|86169086|gb|EAQ70342.1| ribosomal protein S6 [Synechococcus sp. RS9917]
Length = 122
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDILAEAGAEV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
++ + +++ MR+ E+V+R LT+ D +P
Sbjct: 66 LSHNGDGQQVAVLEKAMRLSEDVIRYLTVKQDGPLPAP 103
>gi|326790178|ref|YP_004307999.1| ribosomal protein S6 [Clostridium lentocellum DSM 5427]
gi|326540942|gb|ADZ82801.1| ribosomal protein S6 [Clostridium lentocellum DSM 5427]
Length = 96
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L +S ++ T+ + + LI GGE+ V++ G R +AY I K ++ +Y
Sbjct: 1 MRNYELSVVLFSTLSEEEKVATLEKVKDLIVRFGGEITNVDDWGKRKLAYEINKQKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F+ + + E++ ++RI E VLR L + +D
Sbjct: 61 YFIQFQAETSVPAEIESRVRIMETVLRYLIVSLD 94
>gi|330443832|ref|YP_004376818.1| 30S ribosomal protein S6 [Chlamydophila pecorum E58]
gi|328806942|gb|AEB41115.1| ribosomal protein S6 [Chlamydophila pecorum E58]
Length = 112
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE ++ +S + + + + S I GE+ +++ G + +AY IR R+ YY
Sbjct: 7 QLYEGAYVFSVTLSEEARRKALDKVISGITNYDGEINKIHDQGRKKLAYTIRGAREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ P AI E+ R+ ++E++LR + DS
Sbjct: 67 FIYFTVVPEAIAELWREYHLNEDLLRFMIFKADS 100
>gi|225848302|ref|YP_002728465.1| ribosomal protein S6 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644537|gb|ACN99587.1| ribosomal protein S6 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 104
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S +++ + Q+LI+EN GE+ + + G R +AY I+K YY
Sbjct: 1 MRHYELVFVLKPTLSEEELNSRVEAIQNLIKENQGEIYNLEKWGRRNLAYPIQKFNSGYY 60
Query: 61 VFMNIAS---PPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + A I ++ +RI E+V+R L + + E
Sbjct: 61 YLINYKTDNNKLAGI--LEYNLRITEDVIRFLNMKIHVKE 98
>gi|149182310|ref|ZP_01860789.1| ribosomal protein S6 (BS9) [Bacillus sp. SG-1]
gi|148850002|gb|EDL64173.1| ribosomal protein S6 (BS9) [Bacillus sp. SG-1]
Length = 95
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ NG E+ E G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPNVDDETKKAVVDRFDNVLTSNGAEIVESKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I S A+ E R +I ++++R + +
Sbjct: 61 QLVKIQSNNEAVSEFDRLAKISDDIIRHIVI 91
>gi|160916103|ref|ZP_02078310.1| hypothetical protein EUBDOL_02130 [Eubacterium dolichum DSM 3991]
gi|158431827|gb|EDP10116.1| hypothetical protein EUBDOL_02130 [Eubacterium dolichum DSM 3991]
Length = 97
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 1 MKLYEHVFLLRQDI---SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
MK YE ++++ + +SQ++ D++ +I ++ G + V++ G++ AY I+ K
Sbjct: 1 MKKYEIMYIVNASLDEAASQKVMDSL---HKIITDHEGTIDNVDDWGVKEFAYEIKHMNK 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+YV +N+ + IHE +R RI+ NV+R + +
Sbjct: 58 GHYVVINVTANNEGIHEFERLARINPNVVRYMVV 91
>gi|149194316|ref|ZP_01871413.1| 30S ribosomal protein S6 [Caminibacter mediatlanticus TB-2]
gi|149135491|gb|EDM23970.1| 30S ribosomal protein S6 [Caminibacter mediatlanticus TB-2]
Length = 111
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +++ ++ ++ + I + +I + GEV V+ +G+R +AY I K + +Y +
Sbjct: 6 YETMVIVKPTLTDEEKEAIIDNIKKVISDFKGEVVAVDNIGVRELAYPIEKFERGHYYII 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+P A+ E++R++R +E VLR +T+
Sbjct: 66 YYKAPAEAVIELERQLRYNEEVLRFMTV 93
>gi|289641253|ref|ZP_06473420.1| ribosomal protein S6 [Frankia symbiont of Datisca glomerata]
gi|289509015|gb|EFD29947.1| ribosomal protein S6 [Frankia symbiont of Datisca glomerata]
Length = 98
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 49/81 (60%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L D+ + + ++ QY ++++ GG V V+ G R +AY IRK+ + Y +++ +
Sbjct: 2 VILEPDLEERTVAPSLDQYLTVVRSGGGVVEKVDVWGRRRLAYEIRKSFEGIYAIIDLHA 61
Query: 68 PPAAIHEMKRKMRIDENVLRS 88
P + E+ R++ ++E+V+R+
Sbjct: 62 EPDVVAELDRQLVLNESVIRT 82
>gi|116628690|ref|YP_813862.1| 30S ribosomal protein S6 [Lactobacillus gasseri ATCC 33323]
gi|238853345|ref|ZP_04643725.1| ribosomal protein S6 [Lactobacillus gasseri 202-4]
gi|282852322|ref|ZP_06261664.1| ribosomal protein S6 [Lactobacillus gasseri 224-1]
gi|300362672|ref|ZP_07058848.1| 30S ribosomal protein S6 [Lactobacillus gasseri JV-V03]
gi|311111571|ref|ZP_07712968.1| ribosomal protein S6 [Lactobacillus gasseri MV-22]
gi|122274312|sp|Q047E8|RS6_LACGA RecName: Full=30S ribosomal protein S6
gi|116094272|gb|ABJ59424.1| SSU ribosomal protein S6P [Lactobacillus gasseri ATCC 33323]
gi|238834033|gb|EEQ26290.1| ribosomal protein S6 [Lactobacillus gasseri 202-4]
gi|282556064|gb|EFB61684.1| ribosomal protein S6 [Lactobacillus gasseri 224-1]
gi|300353663|gb|EFJ69535.1| 30S ribosomal protein S6 [Lactobacillus gasseri JV-V03]
gi|311066725|gb|EFQ47065.1| ribosomal protein S6 [Lactobacillus gasseri MV-22]
Length = 98
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE ++++ DI K I ++ ++ +NG E + G R AY I K R+ Y++
Sbjct: 6 YEVTYIIKPDIDEDSKKALIDRFDKVVTDNGAEELESKDWGKRRFAYEIEKYREGTYHIM 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+A + E R RID VLRS+T+ +D
Sbjct: 66 TFVAENSEPVDEFGRLSRIDNQVLRSMTVKLD 97
>gi|317968334|ref|ZP_07969724.1| 30S ribosomal protein S6 [Synechococcus sp. CB0205]
Length = 114
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR DI ++++ I +Y+ L+ E G EV G R +AY I K+++ YV +
Sbjct: 1 MYILRPDIPEEEVETHITKYRDLVTEAGAEVLDCQMRGKRRLAYTIAKHKEGIYVQLAHN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ +++ MR+ E+V+R LT+ D +P
Sbjct: 61 GDGQQVAALEKAMRLSEDVIRYLTVKQDGPLPAP 94
>gi|227496645|ref|ZP_03926921.1| ribosomal protein S6 [Actinomyces urogenitalis DSM 15434]
gi|226833840|gb|EEH66223.1| ribosomal protein S6 [Actinomyces urogenitalis DSM 15434]
Length = 95
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILEPETDERTVAASLEKLLQVVPSNGGTVDKVDVWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+ +++ + P E+ R++ ++E VLR+
Sbjct: 61 IVVDMTTTPEIAQELDRQLGLNETVLRT 88
>gi|220927514|ref|YP_002504423.1| ribosomal protein S6 [Clostridium cellulolyticum H10]
gi|219997842|gb|ACL74443.1| ribosomal protein S6 [Clostridium cellulolyticum H10]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F++ ++ + K + ++++++ E ++ ++E G R +AY I + YY
Sbjct: 2 LKNYETIFIINSEVGEENTKALVEKFKTML-ETSAQLESMDEWGKRKLAYEIDDKTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V N +S P E++R +I E +L+ + +
Sbjct: 61 VLANFSSSPDFPAELERMYKITEGILKYIII 91
>gi|260888677|ref|ZP_05899940.1| ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|330839914|ref|YP_004414494.1| 30S ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|260861609|gb|EEX76109.1| ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|329747678|gb|AEC01035.1| 30S ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
Length = 112
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + + I ++ LIQ NGG + + G + + Y I+ YY
Sbjct: 1 MRKYEVIFIVKP-MEEEATNAVIEKFVKLIQTNGGMIDKEDRWGKKRLVYEIKDYTDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ + PA + E R M+I +++L+ + +
Sbjct: 60 CLLNVTAEPACMKECDRVMKITDDLLKHMIV 90
>gi|189501829|ref|YP_001957546.1| 30S ribosomal protein S6 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497270|gb|ACE05817.1| hypothetical protein Aasi_0399 [Candidatus Amoebophilus asiaticus
5a2]
Length = 127
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE--LGMRTIAYRIRKNRKA 58
+K YE VF+L ++S+Q + TI ++++ + E EV +V+E +G++ +AY I+
Sbjct: 3 LKNYETVFVLTPVLTSEQTEGTITKFRNFLLEK--EVEIVHEEAIGLKKLAYPIQHKNTG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-------SHEQSPTLTIQRH 107
Y + + P I ++ + DEN++R LT ++D +++ TL +++H
Sbjct: 61 IYHLIEFKAKPEVIATLEIAYKRDENIIRFLTFVLDKDGIEYNEQKRNGTLQLKKH 116
>gi|313113166|ref|ZP_07798792.1| ribosomal protein S6 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624505|gb|EFQ07834.1| ribosomal protein S6 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G+++SLI+ NG + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEATAALVGKFKSLIEANG-TIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
++ S P+ E+ R +I E V+RSL + +HE+
Sbjct: 60 TVIDFTSEPSFPAELDRVYKITEGVMRSLII---AHEE 94
>gi|327438178|dbj|BAK14543.1| ribosomal protein S6 [Solibacillus silvestris StLB046]
Length = 96
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++Q ++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYELMYIIRPNIEEEAKKALVERFQEILTSNGAEITEAKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + AI+E R I E+++R + +
Sbjct: 61 QIVKVNAGTEAINEYTRLANISEDIIRHIAV 91
>gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172]
gi|227235567|gb|EEI85582.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + +++ + +++ I+ENG EV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIFKTELADADRNALLDRFKGHIEENG-EVVSVDDWGKRRLAYEIADLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ S P I E +R++R+ + VLR + +
Sbjct: 60 YIVDFKSDPDHIKEFERRLRLSDFVLRYMVI 90
>gi|326383851|ref|ZP_08205535.1| 30S ribosomal protein S6 [Gordonia neofelifaecis NRRL B-59395]
gi|326197310|gb|EGD54500.1| 30S ribosomal protein S6 [Gordonia neofelifaecis NRRL B-59395]
Length = 93
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++ GG+V V G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRNEGGKVDDVEIWGKRRLAYEIAKHNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + PA + E+ R+++++E+VLR+ L
Sbjct: 61 AVVQLNATPATVSELDRQLKLNESVLRTKVL 91
>gi|212550374|ref|YP_002308691.1| 30S ribosomal protein S6 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226703416|sp|B6YQ08|RS6_AZOPC RecName: Full=30S ribosomal protein S6
gi|212548612|dbj|BAG83280.1| 30S ribosomal protein S6 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 112
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VF+L +S +Q+K+T+ +++ ++ E+ G+R ++Y I++ +Y +
Sbjct: 4 YEAVFILTPVLSDEQVKETVNKFKDILIAEEAEIINEENWGLRKLSYPIQRKTTGFYFLL 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
S I +++ + R DE VLR LT
Sbjct: 64 EFKSDSTIISKLETQFRRDEKVLRFLTF 91
>gi|23008095|ref|ZP_00049682.1| COG0360: Ribosomal protein S6 [Magnetospirillum magnetotacticum
MS-1]
Length = 96
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + ++ +Y S+I+ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPEIEERTVAPSLDKYLSVIKTDGGSVDKVDIWGRRRLAYDINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ S E+ R++ ++E VLR+ L D+
Sbjct: 61 AVVDFTSTSDTAKELDRQLGLNEVVLRTKILRTDA 95
>gi|262375304|ref|ZP_06068537.1| ribosomal protein S6 [Acinetobacter lwoffii SH145]
gi|262309558|gb|EEY90688.1| ribosomal protein S6 [Acinetobacter lwoffii SH145]
Length = 128
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++RSL +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRSLII 90
>gi|308273057|emb|CBX29661.1| 30S ribosomal protein S6 [uncultured Desulfobacterium sp.]
Length = 149
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ DI + + + +I + G + +NE G + +AY I K + +Y
Sbjct: 1 MRRYETTVIIDPDIPPENRAPLLEKINEIISQKDGFLVKLNEWGTQKLAYEISKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V ++ + EM+R RID+ VL+ +T+L++ +
Sbjct: 61 VHLDFCGTGLLVSEMERFFRIDDRVLKFMTILLEKN 96
>gi|317050836|ref|YP_004111952.1| 30S ribosomal protein S6 [Desulfurispirillum indicum S5]
gi|316945920|gb|ADU65396.1| ribosomal protein S6 [Desulfurispirillum indicum S5]
Length = 145
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ QQ+ D I + +I G + G + +AY I +Y
Sbjct: 1 MKKYELMFILKPELDEQQLADYIARVDGIIARYEGTIDKFENWGKKKLAYEIDNKSFGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ A I E++R +I + ++R ++L +D
Sbjct: 61 YLYHLSCASALIDELERNFKISDEMMRFISLRLD 94
>gi|169633238|ref|YP_001706974.1| 30S ribosomal protein S6 [Acinetobacter baumannii SDF]
gi|169795504|ref|YP_001713297.1| 30S ribosomal protein S6 [Acinetobacter baumannii AYE]
gi|213158556|ref|YP_002319854.1| ribosomal protein S6 [Acinetobacter baumannii AB0057]
gi|215482991|ref|YP_002325196.1| ribosomal protein S6 [Acinetobacter baumannii AB307-0294]
gi|229577093|ref|YP_001085200.2| 30S ribosomal protein S6 [Acinetobacter baumannii ATCC 17978]
gi|239501438|ref|ZP_04660748.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB900]
gi|260554566|ref|ZP_05826787.1| ribosomal protein S6 [Acinetobacter baumannii ATCC 19606]
gi|301345098|ref|ZP_07225839.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB056]
gi|301510830|ref|ZP_07236067.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB058]
gi|301595325|ref|ZP_07240333.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB059]
gi|332850733|ref|ZP_08432980.1| ribosomal protein S6 [Acinetobacter baumannii 6013150]
gi|332866956|ref|ZP_08437282.1| ribosomal protein S6 [Acinetobacter baumannii 6013113]
gi|332873686|ref|ZP_08441629.1| ribosomal protein S6 [Acinetobacter baumannii 6014059]
gi|226703405|sp|B7H0K0|RS6_ACIB3 RecName: Full=30S ribosomal protein S6
gi|226703406|sp|B7IBC1|RS6_ACIB5 RecName: Full=30S ribosomal protein S6
gi|226703407|sp|B0VM10|RS6_ACIBS RecName: Full=30S ribosomal protein S6
gi|226703408|sp|B0V7G7|RS6_ACIBY RecName: Full=30S ribosomal protein S6
gi|226703588|sp|A3M6Q4|RS6_ACIBT RecName: Full=30S ribosomal protein S6
gi|169148431|emb|CAM86297.1| 30S ribosomal protein S6 [Acinetobacter baumannii AYE]
gi|169152030|emb|CAP00910.1| 30S ribosomal protein S6 [Acinetobacter baumannii]
gi|193077740|gb|ABO12598.2| 30S ribosomal protein S6 [Acinetobacter baumannii ATCC 17978]
gi|213057716|gb|ACJ42618.1| ribosomal protein S6 [Acinetobacter baumannii AB0057]
gi|213987725|gb|ACJ58024.1| ribosomal protein S6 [Acinetobacter baumannii AB307-0294]
gi|260411108|gb|EEX04405.1| ribosomal protein S6 [Acinetobacter baumannii ATCC 19606]
gi|322507496|gb|ADX02950.1| rpsF [Acinetobacter baumannii 1656-2]
gi|323518608|gb|ADX92989.1| 30S ribosomal protein S6 [Acinetobacter baumannii TCDC-AB0715]
gi|332730570|gb|EGJ61886.1| ribosomal protein S6 [Acinetobacter baumannii 6013150]
gi|332734337|gb|EGJ65464.1| ribosomal protein S6 [Acinetobacter baumannii 6013113]
gi|332738074|gb|EGJ68958.1| ribosomal protein S6 [Acinetobacter baumannii 6014059]
Length = 127
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + + E++ R ++ ++R+L +
Sbjct: 60 ILMNVECGQSTLDELEELFRYNDAIIRNLII 90
>gi|323141487|ref|ZP_08076376.1| ribosomal protein S6 [Phascolarctobacterium sp. YIT 12067]
gi|322414067|gb|EFY04897.1| ribosomal protein S6 [Phascolarctobacterium sp. YIT 12067]
Length = 94
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + + + +++ LI NGG V + G R +AY I+ + Y
Sbjct: 1 MNAYEVMYIVKP-VEDEACEAVVAKFEKLITANGGNVEKTDRWGKRRLAYEIQDLNEGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + AA+ E+ R M+I + VLR + +
Sbjct: 60 VLVTFQADAAAVKELDRVMKITDEVLRHMII 90
>gi|288921428|ref|ZP_06415706.1| ribosomal protein S6 [Frankia sp. EUN1f]
gi|288347162|gb|EFC81461.1| ribosomal protein S6 [Frankia sp. EUN1f]
Length = 108
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 53/85 (62%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L ++ + + ++ QY +++++ GG V V+ G R ++Y I K+ + Y +
Sbjct: 5 YELMVILDPELEERTVAPSLDQYLNVVRQGGGVVEKVDVWGRRRLSYEIAKSYEGIYAVI 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
++ + PA + E+ R++ ++E+V+R+
Sbjct: 65 DLHTEPAIVAELDRQLVLNESVIRT 89
>gi|194476869|ref|YP_002049048.1| 30S ribosomal protein S6 [Paulinella chromatophora]
gi|171191876|gb|ACB42838.1| 30S ribosomal protein S6 [Paulinella chromatophora]
Length = 121
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI ++++ + +Y+ ++ + G EV G R +AY + K+R+ YV +
Sbjct: 6 YETMYILRPDIPEEEVESHLTKYRGIVVDAGAEVLDSQMRGKRRLAYPVDKHREGIYVQL 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + ++R MR+ E+V+R LT+
Sbjct: 66 SHNGDGQQVAPLERAMRLSEDVIRYLTV 93
>gi|149279560|ref|ZP_01885689.1| 30S ribosomal protein S6 [Pedobacter sp. BAL39]
gi|149229596|gb|EDM34986.1| 30S ribosomal protein S6 [Pedobacter sp. BAL39]
Length = 120
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V +L +S + K+ I ++ +I ++G E+ + G+R +AY I K ++
Sbjct: 1 MNQYETVIVLTPLLSEEVAKEAIAKFSKIITDSGAEIVQEDNWGLRKLAYPIEKKASGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
S I +++ ++ DE VLR LT+ +D H
Sbjct: 61 HLTEYKSSGELITKLELALKRDERVLRFLTIRLDRH 96
>gi|320531752|ref|ZP_08032681.1| ribosomal protein S6 [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136015|gb|EFW28034.1| ribosomal protein S6 [Actinomyces sp. oral taxon 171 str. F0337]
Length = 95
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E VLR+
Sbjct: 61 VVVDMTTTPEIAQELDRQLGLNETVLRT 88
>gi|326202833|ref|ZP_08192700.1| ribosomal protein S6 [Clostridium papyrosolvens DSM 2782]
gi|325986910|gb|EGD47739.1| ribosomal protein S6 [Clostridium papyrosolvens DSM 2782]
Length = 94
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F++ ++ + K + ++++L+ E ++ ++E G R +AY I YY
Sbjct: 2 LKKYETIFIINSEVGEEATKALVEKFKTLL-ETSAQLENIDEWGKRKLAYEIDDKIDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V N +S P E++R +I E +L+ + +
Sbjct: 61 VLANFSSSPDFPAELERIYKITEGILKYIII 91
>gi|228924219|ref|ZP_04087490.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229051143|ref|ZP_04194687.1| 30S ribosomal protein S6 [Bacillus cereus AH676]
gi|228722206|gb|EEL73607.1| 30S ribosomal protein S6 [Bacillus cereus AH676]
gi|228835437|gb|EEM80807.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 90
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVK 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
S AI+E R +I+E++LR + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIVV 85
>gi|291521976|emb|CBK80269.1| SSU ribosomal protein S6P [Coprococcus catus GD/7]
Length = 95
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L I ++ +I + + +I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLTTKIEDEERAASIEKIKEVIARFGGVVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E+++++RI ENV+R L + D+
Sbjct: 61 YFITFESDSNCPNEVEQRVRIMENVIRYLCIRQDA 95
>gi|225016119|ref|ZP_03705352.1| hypothetical protein CLOSTMETH_00063 [Clostridium methylpentosum
DSM 5476]
gi|224951116|gb|EEG32325.1| hypothetical protein CLOSTMETH_00063 [Clostridium methylpentosum
DSM 5476]
Length = 97
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + I+ + +++ LI+++ + V+E G R +AY I YYV
Sbjct: 8 YETILILNTKLGDDGIQTLVEKFKKLIEDHA-TLESVDEWGKRRLAYEIEDETDGYYVLF 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N S P+ E+ R +I + V+RSL + D
Sbjct: 67 NFTSEPSFPAELDRIYKITDGVMRSLIIAKD 97
>gi|330978938|gb|EGH77997.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 86
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKM 79
V +N+ ++ E + ++
Sbjct: 60 VMLNVECTGKSLAEREEQL 78
>gi|270288994|ref|ZP_06195296.1| 30S ribosomal protein S6 [Chlamydia muridarum Weiss]
Length = 96
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 28 SLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
S I GGEV +++ G + +AY IR R+ YY F+ P AI E+ R+ ++E++LR
Sbjct: 17 SGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYYFIYFTVAPEAISELWREYHLNEDLLR 76
Query: 88 SLTL 91
+TL
Sbjct: 77 FMTL 80
>gi|262369756|ref|ZP_06063084.1| 30S ribosomal protein S6 [Acinetobacter johnsonii SH046]
gi|262315824|gb|EEY96863.1| 30S ribosomal protein S6 [Acinetobacter johnsonii SH046]
Length = 128
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++RSL +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRSLII 90
>gi|307108495|gb|EFN56735.1| hypothetical protein CHLNCDRAFT_144161 [Chlorella variabilis]
Length = 143
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LYE L + + + I + S + E GG V + G R +AY IR +++
Sbjct: 1 MPLYELFALAKPQLGKKAIASIMKAVASKVMEQGGVVTDIRSYGERKLAYDIRQPGVRHK 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+A +N A+ PA + E+ +R+DE +LR L L + + PT
Sbjct: 61 EAAMWQINFAANPATLPELDHTLRVDERMLRWLVLKRQPYRRLPT 105
>gi|229176150|ref|ZP_04303642.1| 30S ribosomal protein S6 [Bacillus cereus MM3]
gi|228607309|gb|EEK64639.1| 30S ribosomal protein S6 [Bacillus cereus MM3]
Length = 90
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
S AI+E R +I+E++LR + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIVV 85
>gi|229020699|ref|ZP_04177426.1| 30S ribosomal protein S6 [Bacillus cereus AH1273]
gi|229065133|ref|ZP_04200426.1| 30S ribosomal protein S6 [Bacillus cereus AH603]
gi|228716162|gb|EEL67881.1| 30S ribosomal protein S6 [Bacillus cereus AH603]
gi|228740594|gb|EEL90865.1| 30S ribosomal protein S6 [Bacillus cereus AH1273]
Length = 90
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
S AI+E R +I+E++LR + +
Sbjct: 61 SNSEAINEFDRLAKINEDILRHIVV 85
>gi|164686460|ref|ZP_02210488.1| hypothetical protein CLOBAR_00025 [Clostridium bartlettii DSM
16795]
gi|164604471|gb|EDQ97936.1| hypothetical protein CLOBAR_00025 [Clostridium bartlettii DSM
16795]
Length = 92
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V++++ + + + + + + +I NG EV V+ G + +AY+I K + +Y
Sbjct: 1 MKNYELVYVVKPNSDDETKESVLNKIKDVISSNG-EVEKVDTWGNKKLAYQIAKFTEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +N S E+ R ++I+ENV+R + ++
Sbjct: 60 VLVNFKSGVEVPKELDRNLKINENVIRHMIVV 91
>gi|11465825|ref|NP_053969.1| ribosomal protein S6 [Porphyra purpurea]
gi|1710707|sp|P51359|RR6_PORPU RecName: Full=30S ribosomal protein S6, chloroplastic
gi|1276825|gb|AAC08245.1| 30S ribosomal protein S6 [Porphyra purpurea]
Length = 112
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+ YE V+L++ D++ + I +Y+S++ G + ++ G R ++Y I+ R Y
Sbjct: 12 LNWYETVYLIKSDLNEDRTLCIINEYKSMLTNGGAKNIILQHRGRRHLSYSIKDYRDGIY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +N + ++ +R DEN++R LT
Sbjct: 72 VQVNYEGNGKLVQSFEKSLRFDENIIRYLT 101
>gi|289450775|ref|YP_003475643.1| 30S ribosomal protein S6 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185322|gb|ADC91747.1| ribosomal protein S6 [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 94
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V++L + + + Q+L+ G V V E G R +AY IR ++ +Y
Sbjct: 1 MNKYELVYVLSTTQGDEAVAAASEKVQALVASKG-TVTNVEEWGRRKLAYEIRDEKEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + A +E+ R ++I+E+VLR L +
Sbjct: 60 VVVNFEAAADAPYEIDRILKINEDVLRYLLI 90
>gi|42518091|ref|NP_964021.1| 30S ribosomal protein S6 [Lactobacillus johnsonii NCC 533]
gi|227889151|ref|ZP_04006956.1| 30S ribosomal protein S6 [Lactobacillus johnsonii ATCC 33200]
gi|268318568|ref|YP_003292224.1| ribosomal protein S6 [Lactobacillus johnsonii FI9785]
gi|61215656|sp|Q74M28|RS6_LACJO RecName: Full=30S ribosomal protein S6
gi|41582375|gb|AAS07987.1| 30S ribosomal protein S7 [Lactobacillus johnsonii NCC 533]
gi|227850380|gb|EEJ60466.1| 30S ribosomal protein S6 [Lactobacillus johnsonii ATCC 33200]
gi|262396943|emb|CAX65957.1| ribosomal protein S6 [Lactobacillus johnsonii FI9785]
gi|329666398|gb|AEB92346.1| 30S ribosomal protein S6 [Lactobacillus johnsonii DPC 6026]
Length = 98
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE ++++ DI K I ++ ++ +NG E + G R AY I K R+ Y++
Sbjct: 6 YEVTYIIKPDIDEDSKKALIDRFDKVVTDNGAEELESKDWGKRRFAYEIEKYREGTYHIM 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+A + E R RID +LRS+T+ +D
Sbjct: 66 TFVAENSEPVDEFGRLSRIDNQILRSMTVKLD 97
>gi|297834614|ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
lyrata]
gi|297331029|gb|EFH61448.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEK-HAEEVESINQKVQDFLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN ++E K + DE V+R L +
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVM 209
>gi|221485529|gb|EEE23810.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 406
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LY V L R ++S +IK+ + Y +Q+ V G R +AYR++K A+ V
Sbjct: 282 RLYRVVALFRPELSVPKIKEAVRPYVDQLQQWRCRSLRVTYRGYRRLAYRVKKKDSAHVV 341
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
M P+A+H + K+ +D+N++R + L
Sbjct: 342 EMTFDLLPSAVHYLHVKLNLDDNIIRFMIL 371
>gi|237844073|ref|XP_002371334.1| ribosomal protein S6, putative [Toxoplasma gondii ME49]
gi|211968998|gb|EEB04194.1| ribosomal protein S6, putative [Toxoplasma gondii ME49]
gi|221506381|gb|EEE32016.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 406
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LY V L R ++S +IK+ + Y +Q+ V G R +AYR++K A+ V
Sbjct: 282 RLYRVVALFRPELSVPKIKEAVRPYVDQLQQWRCRSLRVTYRGYRRLAYRVKKKDSAHVV 341
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
M P+A+H + K+ +D+N++R + L
Sbjct: 342 EMTFDLLPSAVHYLHVKLNLDDNIIRFMIL 371
>gi|260549408|ref|ZP_05823627.1| ribosomal protein S6 [Acinetobacter sp. RUH2624]
gi|260407517|gb|EEX00991.1| ribosomal protein S6 [Acinetobacter sp. RUH2624]
Length = 127
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R+L +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLII 90
>gi|171742014|ref|ZP_02917821.1| hypothetical protein BIFDEN_01117 [Bifidobacterium dentium ATCC
27678]
gi|283456852|ref|YP_003361416.1| 30S ribosomal protein S6 [Bifidobacterium dentium Bd1]
gi|306824378|ref|ZP_07457747.1| 30S ribosomal protein S6 [Bifidobacterium dentium ATCC 27679]
gi|309802012|ref|ZP_07696125.1| ribosomal protein S6 [Bifidobacterium dentium JCVIHMP022]
gi|171277628|gb|EDT45289.1| hypothetical protein BIFDEN_01117 [Bifidobacterium dentium ATCC
27678]
gi|283103486|gb|ADB10592.1| 30S ribosomal protein S6 [Bifidobacterium dentium Bd1]
gi|304552409|gb|EFM40327.1| 30S ribosomal protein S6 [Bifidobacterium dentium ATCC 27679]
gi|308221347|gb|EFO77646.1| ribosomal protein S6 [Bifidobacterium dentium JCVIHMP022]
Length = 95
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG V ++ G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLELVTKEGGAVENIDIWGRRKLAYEIADKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N ++ PA E+ R + ++E+V+R+ L
Sbjct: 66 NYSAEPATSDELDRLLNLNESVIRTKIL 93
>gi|77919595|ref|YP_357410.1| 30S ribosomal protein S6 [Pelobacter carbinolicus DSM 2380]
gi|91207926|sp|Q3A317|RS6_PELCD RecName: Full=30S ribosomal protein S6
gi|77545678|gb|ABA89240.1| SSU ribosomal protein S6P [Pelobacter carbinolicus DSM 2380]
Length = 115
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ ++ D + + + +++ ++ + + V+E G+R +AY ++K + Y
Sbjct: 1 MRTYENIMIVHPDKVADEYNAVVEKFKGVLTDLNANLLKVDEWGVRKLAYPVKKQGRGSY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + P I E +R++R+DE V++ T+L++
Sbjct: 61 VLTVFEADPTIIDEYERRLRLDEAVIKFQTVLLE 94
>gi|229159034|ref|ZP_04287090.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 4342]
gi|228624453|gb|EEK81224.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 4342]
Length = 90
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
S AI+E R +I+E++LR + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIIV 85
>gi|226226612|ref|YP_002760718.1| 30S ribosomal protein S6 [Gemmatimonas aurantiaca T-27]
gi|226089803|dbj|BAH38248.1| 30S ribosomal protein S6 [Gemmatimonas aurantiaca T-27]
Length = 130
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V++ + I + + + QSL+ N E + G R +AY+I ++ YYV
Sbjct: 14 YEAVYIFDSALEDTVIVEKLEKLQSLL--NLAEPAEIEHWGRRQLAYKIGRHENGYYVIS 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + P + E +R +++DE V+R L L + +P L+
Sbjct: 72 HFTTVPTTLPEFERALKLDETVVRYLVTLHEHELGAPKLS 111
>gi|323698323|ref|ZP_08110235.1| ribosomal protein S6 [Desulfovibrio sp. ND132]
gi|323458255|gb|EGB14120.1| ribosomal protein S6 [Desulfovibrio desulfuricans ND132]
Length = 96
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 50/88 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + LL +++++ + ++ GG++ ++ GMR +AY ++K + YYV +
Sbjct: 5 YETLVLLSPELAAEDRTTILDTLTGIVDREGGKMVETDDWGMRQLAYPVQKQTRGYYVRL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+P A + E++R +RI + + + +T+
Sbjct: 65 VYDAPGALVAELERNIRITDGIFKFMTV 92
>gi|313900384|ref|ZP_07833878.1| ribosomal protein S6 [Clostridium sp. HGF2]
gi|312954933|gb|EFR36607.1| ribosomal protein S6 [Clostridium sp. HGF2]
Length = 97
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + + +I ++ G + V+E G++ AY I +K YY
Sbjct: 1 MKKYEIMYIVNASLDDAARTKLMDSFHKIITDHEGTIDKVDEWGVKEFAYEINHMKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + IHE +R RI+ +++R + +
Sbjct: 61 VVVNATANNEGIHEFERLARINHSIVRYMII 91
>gi|91214892|ref|ZP_01251865.1| 30S ribosomal protein S6 [Psychroflexus torquis ATCC 700755]
gi|91187319|gb|EAS73689.1| 30S ribosomal protein S6 [Psychroflexus torquis ATCC 700755]
Length = 112
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEDQIKETVKKYEDFLVSEGAKMVNKEDWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I ++ R DE ++R LT+ +D H
Sbjct: 61 HMFEYEVVGPTIEPLEVMFRRDERMMRYLTVKLDKH 96
>gi|306820944|ref|ZP_07454564.1| 30S ribosomal protein S6 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551058|gb|EFM39029.1| 30S ribosomal protein S6 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 96
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 1 MKLYEHVFLLRQDI---SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
MK YE +++LR D + Q+I+D + + +I+ENG EV + + G R +AY+I+K
Sbjct: 1 MKKYELIYILRTDSDDETKQRIQDKL---RGIIEENG-EVEVFDVWGNRKLAYQIQKLTD 56
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
YYV + + P E+ R ++I + +R + + V
Sbjct: 57 GYYVLVKFTAGPQVPKELDRNLKIMDEAIRHMIINV 92
>gi|325662896|ref|ZP_08151465.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086620|ref|ZP_08335698.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470948|gb|EGC74177.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330410453|gb|EGG89885.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 95
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + I + + LI GG V V+E G + +AY I+K ++ YY
Sbjct: 1 MNKYELAVVVSAKVEDDVRAGVIEKVKELIARFGGNVTDVDEWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S E++ +MRI ENV+R L +
Sbjct: 61 YFIHFESDSTVPAELESRMRIMENVIRFLCV 91
>gi|302764328|ref|XP_002965585.1| hypothetical protein SELMODRAFT_7735 [Selaginella moellendorffii]
gi|302769290|ref|XP_002968064.1| hypothetical protein SELMODRAFT_7736 [Selaginella moellendorffii]
gi|300163708|gb|EFJ30318.1| hypothetical protein SELMODRAFT_7736 [Selaginella moellendorffii]
gi|300166399|gb|EFJ33005.1| hypothetical protein SELMODRAFT_7735 [Selaginella moellendorffii]
Length = 98
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE ++L+ + ++K+ + ++ ++E G + N+ GMR +AY+I+K A Y
Sbjct: 1 VKHYEIMYLV-HEAKVGELKEIVDKFTGFVKEKKGRIWRFNDWGMRRLAYKIKKTWHANY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MNI I+E+ + DE ++R + +
Sbjct: 60 ILMNIEVGSEYINELNALLEKDERIIRHMII 90
>gi|197302889|ref|ZP_03167941.1| hypothetical protein RUMLAC_01618 [Ruminococcus lactaris ATCC
29176]
gi|197298126|gb|EDY32674.1| hypothetical protein RUMLAC_01618 [Ruminococcus lactaris ATCC
29176]
Length = 95
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + D I + +++I GG V V+E G R AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARADVIEKVKAMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ + E+++++RI +NVLR L +
Sbjct: 61 YFVHFEAESTVPAEVEQRIRIMDNVLRYLCV 91
>gi|94986796|ref|YP_594729.1| 30S ribosomal protein S6 [Lawsonia intracellularis PHE/MN1-00]
gi|166226976|sp|Q1MRG8|RS6_LAWIP RecName: Full=30S ribosomal protein S6
gi|94731045|emb|CAJ54408.1| ribosomal protein S6 [Lawsonia intracellularis PHE/MN1-00]
Length = 105
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 28 SLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
S+I++N G+ VN GMR +AY ++K+ + YYV + + P I E++R +RI + +
Sbjct: 28 SIIEKNKGQFT-VNHWGMRDLAYPVQKHMRGYYVLLEYTTYPNIIEELERIIRITNGIFK 86
Query: 88 SLTLLVDSH 96
+T+ ++ H
Sbjct: 87 FMTIKLEEH 95
>gi|299769500|ref|YP_003731526.1| 30S ribosomal protein S6 [Acinetobacter sp. DR1]
gi|298699588|gb|ADI90153.1| 30S ribosomal protein S6 [Acinetobacter sp. DR1]
Length = 127
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R+L +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLII 90
>gi|313205959|ref|YP_004045136.1| SSU ribosomal protein s6p [Riemerella anatipestifer DSM 15868]
gi|312445275|gb|ADQ81630.1| SSU ribosomal protein S6P [Riemerella anatipestifer DSM 15868]
gi|315022272|gb|EFT35300.1| SSU ribosomal protein S6p [Riemerella anatipestifer RA-YM]
gi|325336602|gb|ADZ12876.1| Ribosomal protein S6 [Riemerella anatipestifer RA-GD]
Length = 113
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ L+++ E+ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILTPVLSDAQVEEAVKKFEDLLKDQNCEIVAKENWGLKKLAYPIQLKKNGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + +++ + DE V+R LT +D H
Sbjct: 61 TLIEFKGEGTIVADLELAFKRDERVIRYLTTKLDKH 96
>gi|310659870|ref|YP_003937591.1| 30S ribosomal protein s6 [Clostridium sticklandii DSM 519]
gi|308826648|emb|CBH22686.1| 30S ribosomal protein S6 [Clostridium sticklandii]
Length = 95
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR ++ + + + + +I E+ GEV V+ G R +AY I K + YY
Sbjct: 1 MRNYELIYVLRPNLEEEAKTAVLDKVKGII-ESSGEVVKVDTWGTRKLAYEIEKLTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N S E+ R ++I +N +R + + +D
Sbjct: 60 VLINFKSTTEVPKEIDRNLKIMDNAIRHMIVKLD 93
>gi|227494165|ref|ZP_03924481.1| ribosomal protein S6 [Actinomyces coleocanis DSM 15436]
gi|226831899|gb|EEH64282.1| ribosomal protein S6 [Actinomyces coleocanis DSM 15436]
Length = 95
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + + + ++ + +L+ +NGG V V+ G R +AY I+K + Y
Sbjct: 1 MRAYELMVIFNPTVDERTVAPSMEKLLTLVTQNGGTVENVDVWGKRRLAYEIQKQSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E+V+R+
Sbjct: 61 VLVHMNTTPDVALEINRQLTLNESVMRT 88
>gi|114568045|ref|YP_755199.1| 30S ribosomal protein S6 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122317111|sp|Q0ATX6|RS6_SYNWW RecName: Full=30S ribosomal protein S6
gi|114338980|gb|ABI69828.1| SSU ribosomal protein S6P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 97
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGE-VRLVNELGMRTIAYRIRKNRKAY 59
M+ YE +F+LR D+ +Q+ +T + Q +I + GGE + + G + +AY I +
Sbjct: 1 MRTYEMMFVLRPDLEEEQVLETKERLQKIIADFGGEFINAADGWGKKRLAYAIDDYVEGI 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y P + E+ R ++I EN LR + +
Sbjct: 61 YSLWYFKGKPETVDELDRIIKISENFLRHIII 92
>gi|332971413|gb|EGK10371.1| 30S ribosomal protein S6 [Desmospora sp. 8437]
Length = 97
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR ++ ++ +++ +I +NGGE + G R +AY I +R+ Y
Sbjct: 1 MHKYELMYILRPELDEEKSNANREKFRGIIADNGGESVEMEHFGKRRLAYLIDDHREGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++E++R++++D++V+R + + +D
Sbjct: 61 TVATFNGTVDTVNELERQLKLDDDVIRHMVINID 94
>gi|262279562|ref|ZP_06057347.1| ribosomal protein S6 [Acinetobacter calcoaceticus RUH2202]
gi|262259913|gb|EEY78646.1| ribosomal protein S6 [Acinetobacter calcoaceticus RUH2202]
Length = 127
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R+L +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLII 90
>gi|325261130|ref|ZP_08127868.1| ribosomal protein S6 [Clostridium sp. D5]
gi|324032584|gb|EGB93861.1| ribosomal protein S6 [Clostridium sp. D5]
Length = 95
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + ++L+ GG V V+E G R AY I+K ++ YY
Sbjct: 1 MNKYELAVVVSAKIEDDARTEVVEKVKALVLRFGGNVTDVDEWGKRRFAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S E+++++RI +NVLR L +
Sbjct: 61 YFIHFESDSTVPGEVEQRIRIMDNVLRYLCV 91
>gi|293375550|ref|ZP_06621824.1| ribosomal protein S6 [Turicibacter sanguinis PC909]
gi|325845125|ref|ZP_08168436.1| ribosomal protein S6 [Turicibacter sp. HGF1]
gi|292645767|gb|EFF63803.1| ribosomal protein S6 [Turicibacter sanguinis PC909]
gi|325488867|gb|EGC91265.1| ribosomal protein S6 [Turicibacter sp. HGF1]
Length = 95
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K I + ++ G E+ + E GMR +AY I K YY
Sbjct: 1 MRKYEIMYIVRPNLEEEGRKAVIEGFNTMFTNMGAEIVEMKEWGMRDLAYAIEDFTKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + S A +E R I E+V+R + +
Sbjct: 61 VVLTVNSSIEAKNEFDRLAGISEDVIRYIAI 91
>gi|269468494|gb|EEZ80152.1| ribosomal protein S6 [uncultured SUP05 cluster bacterium]
Length = 115
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I +GG + + G + +AY I K KA+Y
Sbjct: 1 MRHYEIALIVHPD-QSAQVGTMMDKYKEMITADGGNIHREEDWGRKHLAYPIDKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ MNI + ++ R ++ VLR+L + + P++ + D D +
Sbjct: 60 LMMNIECGQETLDKLNYNFRFNDAVLRNLIISKKTAITEPSIMMTAKDEDKK 111
>gi|116074259|ref|ZP_01471521.1| ribosomal protein S6 [Synechococcus sp. RS9916]
gi|116069564|gb|EAU75316.1| ribosomal protein S6 [Synechococcus sp. RS9916]
Length = 123
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I KN++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDILVEAGAEV-LDNQMRGKRRLAYAINKNKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
++ + +++ MR+ E+V+ LT+ D P
Sbjct: 66 LSHNGDGQQVAVLEKAMRLSEDVIHYLTVKQDGPLPEP 103
>gi|325965249|ref|YP_004243155.1| 30S ribosomal protein S6P [Arthrobacter phenanthrenivorans Sphe3]
gi|323471336|gb|ADX75021.1| SSU ribosomal protein S6P [Arthrobacter phenanthrenivorans Sphe3]
Length = 101
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYEIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R++ ++E ++R+
Sbjct: 61 AVVNFTAKPETAKELDRQLSLNETIMRT 88
>gi|242279493|ref|YP_002991622.1| ribosomal protein S6 [Desulfovibrio salexigens DSM 2638]
gi|242122387|gb|ACS80083.1| ribosomal protein S6 [Desulfovibrio salexigens DSM 2638]
Length = 103
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 56/99 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE + LL +++S K+ + ++I GG++ +++ G R +AY ++ + YY
Sbjct: 2 LRKYEVLLLLSPELASDSRKEIVEGLIAIIDREGGKMDEIDDWGSRQLAYPVQNQTRGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + +P + E++R +RI + + + +T+ +D ++
Sbjct: 62 VRLIFDAPGPLVAELERNIRITDGIFKFVTVKLDETAKA 100
>gi|255993993|ref|ZP_05427128.1| ribosomal protein S6 [Eubacterium saphenum ATCC 49989]
gi|255993661|gb|EEU03750.1| ribosomal protein S6 [Eubacterium saphenum ATCC 49989]
Length = 95
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++ D +I++ I S+I + G EV+ ++ GM+ AY I + YY
Sbjct: 1 MVKYEVMYIIDGDTEESKIEELISMVSSIINDGGKEVK-TDKWGMKRFAYPINYKNEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + P E+ R+++I+E ++R + +
Sbjct: 60 VLTSFEAEPDFPKELDRRLKIEEKIIRHMIV 90
>gi|188587505|ref|YP_001919050.1| ribosomal protein S6 [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226695105|sp|B2A456|RS6_NATTJ RecName: Full=30S ribosomal protein S6
gi|179352192|gb|ACB86462.1| ribosomal protein S6 [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 96
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++L D+ +Q+++ +++S+I+ GG ++ G R +AY I ++ Y
Sbjct: 1 MRAYEVVYVLTPDLEEEQVEEKHNEFKSVIERYGGAPGEIDVWGKRRLAYEIDDYQEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+ E++R +++DE++LR L
Sbjct: 61 ALRKFQGENQVLTELERSLKMDESILRYL 89
>gi|325122722|gb|ADY82245.1| 30S ribosomal protein S6 [Acinetobacter calcoaceticus PHEA-2]
Length = 127
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R+L +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLII 90
>gi|7670041|dbj|BAA94995.1| unnamed protein product [Arabidopsis thaliana]
Length = 356
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 162 MRHYEVVYLIHEK-HAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 220
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN ++E K + DE V+R L +
Sbjct: 221 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVM 251
>gi|213422406|ref|ZP_03355472.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 98
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y + I G++ + + G R +AY I K KA+YV MN+ +P I E++ R +
Sbjct: 2 IERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFN 61
Query: 83 ENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
+ V+RS+ + E SP + + R+ R+D
Sbjct: 62 DAVIRSMVMRTKHAVTEASPMVKAKDERRERRDD 95
>gi|166030695|ref|ZP_02233524.1| hypothetical protein DORFOR_00369 [Dorea formicigenerans ATCC
27755]
gi|166029487|gb|EDR48244.1| hypothetical protein DORFOR_00369 [Dorea formicigenerans ATCC
27755]
Length = 139
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 45 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGKISDVDESGKKRLAYEIQKMKEAYY 104
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ + E+++++RI +NV+R L +
Sbjct: 105 YFIHFDAEADVPGEIEQRIRIMDNVIRYLCV 135
>gi|110799639|ref|YP_697332.1| 30S ribosomal protein S6 [Clostridium perfringens ATCC 13124]
gi|110802528|ref|YP_699891.1| 30S ribosomal protein S6 [Clostridium perfringens SM101]
gi|24212304|sp|Q8XH43|RS6_CLOPE RecName: Full=30S ribosomal protein S6
gi|122958624|sp|Q0TM08|RS6_CLOP1 RecName: Full=30S ribosomal protein S6
gi|123145831|sp|Q0SPR6|RS6_CLOPS RecName: Full=30S ribosomal protein S6
gi|110674286|gb|ABG83273.1| 30S ribosomal protein S6 [Clostridium perfringens ATCC 13124]
gi|110683029|gb|ABG86399.1| 30S ribosomal protein S6 [Clostridium perfringens SM101]
Length = 95
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + + +K I +++ +I+ G V V+ G R +AY I K + YY
Sbjct: 1 MRKYETIFVAHPSLDEEAVKALIEKFKGVIENGNGTVDNVDFWGKRKLAYEIAKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E+ R I + ++R + +
Sbjct: 61 TLINFTANPELPKELDRVFGITDGIIRHIIV 91
>gi|293609460|ref|ZP_06691762.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827912|gb|EFF86275.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 129
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 3 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R+L +
Sbjct: 62 ILMNVECGQTTLDELEELFRYNDAIIRNLII 92
>gi|150387885|ref|YP_001317934.1| ribosomal protein S6 [Alkaliphilus metalliredigens QYMF]
gi|167011241|sp|A6TJA7|RS6_ALKMQ RecName: Full=30S ribosomal protein S6
gi|149947747|gb|ABR46275.1| ribosomal protein S6 [Alkaliphilus metalliredigens QYMF]
Length = 94
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++L+ + ++ +++ +I+ +G V V+E G R +AY I K + YY
Sbjct: 1 MNKYELTYILKSETDEEKRNQLAEKFKGIIEADGA-VENVDEWGNRKLAYEIDKRNEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N AS E+ R ++I E V+R + +
Sbjct: 60 VLVNFASSIDVPKELDRNLKIAEQVIRHMII 90
>gi|113953188|ref|YP_732113.1| 30S ribosomal protein S6 [Synechococcus sp. CC9311]
gi|123327505|sp|Q0I609|RS6_SYNS3 RecName: Full=30S ribosomal protein S6
gi|113880539|gb|ABI45497.1| ribosomal protein S6 [Synechococcus sp. CC9311]
Length = 121
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHVTKYRDILTEAGAEV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGDGQQVGVIEKAMRLSEDVIRYLTV 94
>gi|187251763|ref|YP_001876245.1| 30S ribosomal protein S6 [Elusimicrobium minutum Pei191]
gi|226703465|sp|B2KEG2|RS6_ELUMP RecName: Full=30S ribosomal protein S6
gi|186971923|gb|ACC98908.1| Ribosomal protein S6 [Elusimicrobium minutum Pei191]
Length = 104
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L+ +S ++ + + + I + GGE+ +LG R + I R +Y
Sbjct: 1 MRTYETVTILKPQLSDNEVAEFLNSAKEFITKAGGEIVSEEKLGRRRFTHEIDHVRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V++ + PA + +++E +LRS+ +L
Sbjct: 61 VYLKFRALPAFVKSWDEMAKLNEQILRSIVML 92
>gi|114773243|ref|ZP_01450478.1| 30S ribosomal protein S6 [alpha proteobacterium HTCC2255]
gi|114546362|gb|EAU49271.1| 30S ribosomal protein S6 [alpha proteobacterium HTCC2255]
Length = 131
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ ++GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIEKYSGILTQDGGSITRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + A+ E++ R ++ +LR+L +
Sbjct: 60 VLINAEASAEALEELETAFRFNDVILRNLVM 90
>gi|116672662|ref|YP_833595.1| 30S ribosomal protein S6 [Arthrobacter sp. FB24]
gi|166226798|sp|A0K2H5|RS6_ARTS2 RecName: Full=30S ribosomal protein S6
gi|116612771|gb|ABK05495.1| SSU ribosomal protein S6P [Arthrobacter sp. FB24]
Length = 101
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYEIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R++ ++E ++R+
Sbjct: 61 AVVNFTAKPDTAKELDRQLSLNETIMRT 88
>gi|224099095|ref|XP_002311372.1| predicted protein [Populus trichocarpa]
gi|222851192|gb|EEE88739.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE V+L+ + +++ + Q ++E G + N+ GMR +AY+I+K + A+Y
Sbjct: 132 LRHYEVVYLIHEK-HDEEVGSLNEKVQDFVREKKGRIWRFNDWGMRRLAYKIQKAKNAHY 190
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN I++ K + DE V+R L +
Sbjct: 191 ILMNFELEARWINDFKNMLDKDERVIRHLVI 221
>gi|18401405|ref|NP_566568.1| RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural
constituent of ribosome [Arabidopsis thaliana]
gi|15620810|dbj|BAB67768.1| RPS6-like protein [Arabidopsis thaliana]
gi|18377866|gb|AAL67119.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]
gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]
gi|332642393|gb|AEE75914.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Arabidopsis thaliana]
Length = 314
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEK-HAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN ++E K + DE V+R L +
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVM 209
>gi|227500386|ref|ZP_03930448.1| ribosomal protein S6 [Anaerococcus tetradius ATCC 35098]
gi|227217449|gb|EEI82768.1| ribosomal protein S6 [Anaerococcus tetradius ATCC 35098]
Length = 94
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ + +++ +I +NG EV V++ G R +AY I ++ YY
Sbjct: 1 MNKYEAVLIFKADMADSDRIALLDRFKEIIGQNG-EVTSVDDWGRRKLAYEINDLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ S P I E +R++R+ + ++R + +
Sbjct: 60 YIVDFNSNPDHIREFERRLRLSDFIIRYMVI 90
>gi|18311624|ref|NP_563558.1| 30S ribosomal protein S6 [Clostridium perfringens str. 13]
gi|169343464|ref|ZP_02864464.1| ribosomal protein S6 [Clostridium perfringens C str. JGS1495]
gi|170764006|ref|ZP_02900189.1| ribosomal protein S6 [Clostridium perfringens B str. ATCC 3626]
gi|170764180|ref|ZP_02900237.1| ribosomal protein S6 [Clostridium perfringens E str. JGS1987]
gi|170764288|ref|ZP_02900252.1| ribosomal protein S6 [Clostridium perfringens CPE str. F4969]
gi|182420538|ref|ZP_02951674.1| ribosomal protein S6 [Clostridium perfringens NCTC 8239]
gi|182626414|ref|ZP_02954167.1| ribosomal protein S6 [Clostridium perfringens D str. JGS1721]
gi|18146308|dbj|BAB82348.1| 30S ribosomal protein S6 [Clostridium perfringens str. 13]
gi|169298416|gb|EDS80505.1| ribosomal protein S6 [Clostridium perfringens C str. JGS1495]
gi|170660921|gb|EDT13604.1| ribosomal protein S6 [Clostridium perfringens E str. JGS1987]
gi|170710436|gb|EDT22618.1| ribosomal protein S6 [Clostridium perfringens B str. ATCC 3626]
gi|170713733|gb|EDT25915.1| ribosomal protein S6 [Clostridium perfringens CPE str. F4969]
gi|177908288|gb|EDT70841.1| ribosomal protein S6 [Clostridium perfringens D str. JGS1721]
gi|182379946|gb|EDT77425.1| ribosomal protein S6 [Clostridium perfringens NCTC 8239]
Length = 96
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + + +K I +++ +I+ G V V+ G R +AY I K + YY
Sbjct: 2 MRKYETIFVAHPSLDEEAVKALIEKFKGVIENGNGTVDNVDFWGKRKLAYEIAKVNEGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E+ R I + ++R + +
Sbjct: 62 TLINFTANPELPKELDRVFGITDGIIRHIIV 92
>gi|86607475|ref|YP_476238.1| 30S ribosomal protein S6 [Synechococcus sp. JA-3-3Ab]
gi|123504663|sp|Q2JQZ7|RS6_SYNJA RecName: Full=30S ribosomal protein S6
gi|86556017|gb|ABD00975.1| ribosomal protein S6 [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA-YRIRKNRKAYYVF 62
YE + ++R D+S + ++ + + +SL++ENG + G R A + ++K ++ Y+
Sbjct: 5 YETMLIVRPDLSDEPLQQLLTEQESLLRENGATGLEITNRGKRRFAGFEMKKFKEGLYIQ 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + P + ++ +RI+E++LR +TL V+
Sbjct: 65 FNYEAEPRTVATWEKNLRINESILRYMTLRVN 96
>gi|78214178|ref|YP_382957.1| 30S ribosomal protein S6 [Synechococcus sp. CC9605]
gi|123577268|sp|Q3AG80|RS6_SYNSC RecName: Full=30S ribosomal protein S6
gi|78198637|gb|ABB36402.1| ribosomal protein S6 [Synechococcus sp. CC9605]
Length = 124
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDMLVEAGAEV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGDGQHVAVLEKAMRLSEDVIRYLTV 94
>gi|21553777|gb|AAM62870.1| unknown [Arabidopsis thaliana]
Length = 314
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEK-HAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN ++E K + DE V+R L +
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVM 209
>gi|302531298|ref|ZP_07283640.1| ribosomal protein S6 [Streptomyces sp. AA4]
gi|302440193|gb|EFL12009.1| ribosomal protein S6 [Streptomyces sp. AA4]
Length = 100
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + T+ + ++I+ +GG V V+ G R +AY I+KN + Y +++
Sbjct: 1 MVILDPTLDERTVAPTLDNFLNVIRTSGGSVEKVDVWGRRRLAYEIKKNAEGIYALLDLN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRS 88
S A+ E+ R++ + E VLR+
Sbjct: 61 STAEAVKELDRQLSLQETVLRT 82
>gi|299143650|ref|ZP_07036730.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518135|gb|EFI41874.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 97
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + D+ ++ + + + +I+ENG + V+E GMR +AY I ++AYY
Sbjct: 4 MNKYEAIVMFYPDVEEERRVSSFERLKGIIEENGT-ISNVDEWGMRKLAYEIEYYKEAYY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + P + E R +I ++V+R + + +D
Sbjct: 63 YLVEFEAVPETVKEFDRVSKILDSVMRHMVVRLD 96
>gi|312898033|ref|ZP_07757439.1| ribosomal protein S6 [Megasphaera micronuciformis F0359]
gi|310620858|gb|EFQ04412.1| ribosomal protein S6 [Megasphaera micronuciformis F0359]
Length = 102
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE +F+ + + ++ + +L+ +NG ++ V+ G R +AY ++K YY
Sbjct: 9 VKKYEVMFIAKP-LEEAEVTPIVEFISNLLTKNGAKIEKVDLWGKRHLAYPVKKQNDGYY 67
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N P AI E+ R ++I E +LR L +
Sbjct: 68 VLINFEIEPDAIFEIDRVIKIREEILRHLIV 98
>gi|126651977|ref|ZP_01724169.1| 30S ribosomal protein S6 [Bacillus sp. B14905]
gi|126591246|gb|EAZ85355.1| 30S ribosomal protein S6 [Bacillus sp. B14905]
Length = 95
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ + NG EV E G R +AY I+ R+ YY
Sbjct: 1 MRKYELMYIVRPNIEDEAKKALVERFNEALTSNGAEVIESKEWGKRRLAYEIQDFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + AI+E R I E+++R + +
Sbjct: 61 QIVKVNATSDAINEYTRLANISEDIIRHIAV 91
>gi|227506313|ref|ZP_03936362.1| ribosomal protein S6 [Corynebacterium striatum ATCC 6940]
gi|227197125|gb|EEI77173.1| ribosomal protein S6 [Corynebacterium striatum ATCC 6940]
Length = 99
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 53/92 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + + ++ ++ +++++GG+V V+ G R +AY I K + Y +
Sbjct: 7 YEVMIILDPNQDERTVSPSLDKFLEVVRKDGGKVENVDVWGKRRLAYAIDKKEEGIYAVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ A++ E+ R++ +++ +LR+ L DS
Sbjct: 67 NLECESASVLELDRRLNLNDTILRTKVLRTDS 98
>gi|228930480|ref|ZP_04093480.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936754|ref|ZP_04099545.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229199604|ref|ZP_04326264.1| 30S ribosomal protein S6 [Bacillus cereus m1293]
gi|228583878|gb|EEK42036.1| 30S ribosomal protein S6 [Bacillus cereus m1293]
gi|228822963|gb|EEM68804.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829199|gb|EEM74836.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 90
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 48/85 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
+ AI+E R +I+E++LR + +
Sbjct: 61 ANAEAINEFDRLAKINEDILRHIVV 85
>gi|220914624|ref|YP_002489933.1| 30S ribosomal protein S6 [Arthrobacter chlorophenolicus A6]
gi|254765217|sp|B8H841|RS6_ARTCA RecName: Full=30S ribosomal protein S6
gi|219861502|gb|ACL41844.1| ribosomal protein S6 [Arthrobacter chlorophenolicus A6]
Length = 101
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R++ ++E ++R+
Sbjct: 61 AVVNFTAKPETAKELDRQLSLNETIMRT 88
>gi|309390334|gb|ADO78214.1| ribosomal protein S6 [Halanaerobium praevalens DSM 2228]
Length = 99
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE F+L+ D+ ++ + + + +S I E+ GEV V+ G + +AY I+ R Y +
Sbjct: 8 YETTFVLKPDLEDEEKQTILKRVKSAISEHEGEVTEVDAWGKKQLAYEIKDYRSGDYTIL 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ ++E++R +I + VLR L +
Sbjct: 68 EFNAQTTVVNELERIFKIMDGVLRYLVV 95
>gi|42521680|ref|NP_967060.1| 30S ribosomal protein S6 [Bdellovibrio bacteriovorus HD100]
gi|61215582|sp|Q6MRP3|RS6_BDEBA RecName: Full=30S ribosomal protein S6
gi|39574210|emb|CAE77714.1| 30S ribosomal protein S6 [Bdellovibrio bacteriovorus HD100]
Length = 152
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE V L+ D S ++ KD + ++ I+ G + + G RT+A I K +KA Y
Sbjct: 8 KPYEVVVLMHPDASLEEQKDLFKKNKATIESYKGSINSLETWGKRTLATPIGKLKKAIYF 67
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLR 87
+ AI E++R MRI++ VLR
Sbjct: 68 HSTFEADTQAIAELERTMRINDKVLR 93
>gi|212704877|ref|ZP_03313005.1| hypothetical protein DESPIG_02944 [Desulfovibrio piger ATCC 29098]
gi|212671719|gb|EEB32202.1| hypothetical protein DESPIG_02944 [Desulfovibrio piger ATCC 29098]
Length = 129
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + +++ G + V+ GMR +AY +RK + YY
Sbjct: 30 MRKFETLLLLSPELSAETREGILTALTGVVERENGVMEEVDHWGMRDLAYPVRKQMRGYY 89
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + +P + E++R +RI + + + +T+
Sbjct: 90 VRLVYQAPAELVAELERNVRITDGIFKFVTV 120
>gi|33519563|ref|NP_878395.1| 30S ribosomal protein S6 [Candidatus Blochmannia floridanus]
gi|61215720|sp|Q7VQN9|RS6_BLOFL RecName: Full=30S ribosomal protein S6
gi|33517226|emb|CAD83608.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
floridanus]
Length = 120
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S QI + + Y +I + G++ + G R +AY I+ KAYY
Sbjct: 1 MRYYEIVLIIHPD-SDNQIDNLVNYYSEIIINSTGKIHRLENWGRRQLAYAIKNLNKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
+ +NI + + R +E +LR L + + P+ +++ +DD N
Sbjct: 60 LLLNIEISKNILDILDNDFRFNEIILRYLIMRTKNIIVDPSAMVKK--KDDNN 110
>gi|86609124|ref|YP_477886.1| 30S ribosomal protein S6 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502164|sp|Q2JKZ9|RS6_SYNJB RecName: Full=30S ribosomal protein S6
gi|86557666|gb|ABD02623.1| ribosomal protein S6 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 96
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENG-GEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + ++R D+S + ++ + +++++ENG V + N R + ++K ++ Y+
Sbjct: 5 YETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEGLYIQ 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + P A+ ++ +RI+E+VLR +TL V
Sbjct: 65 FNYEAEPNAVAAWEKNLRINESVLRHMTLRVG 96
>gi|328858003|gb|EGG07117.1| hypothetical protein MELLADRAFT_106173 [Melampsora
larici-populina 98AG31]
Length = 151
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----- 55
M LY L + ++ + SL+ +NGG VR ++ LG R RI+ N
Sbjct: 1 MPLYSLTCLALHYPTYAPLRALVHTSTSLVHKNGGLVRKIDYLGKRNTTQRIKANSIQGG 60
Query: 56 --RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ M A+PP + E+ ++R+D VLR TLLV
Sbjct: 61 VDEADYWTMMFDANPP-TVKELTERLRVDPRVLRHTTLLV 99
>gi|297621052|ref|YP_003709189.1| 30S ribosomal protein S6 [Waddlia chondrophila WSU 86-1044]
gi|297376353|gb|ADI38183.1| 30S ribosomal protein S6 [Waddlia chondrophila WSU 86-1044]
Length = 114
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++++ +S + + Q+ I GGE+ V+E G + +AY I +R+ +Y
Sbjct: 8 LYEGMYIISATLSEDARSKALERVQNEITSRGGEIHKVHEQGKKRMAYEIDGHREGHYYV 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + PAAI E+ + + E+++R +TL
Sbjct: 68 IYFSVSPAAISEVWNEYHLHEDLVRFITL 96
>gi|302877155|ref|YP_003845788.1| 30S ribosomal protein S6 [Clostridium cellulovorans 743B]
gi|307687854|ref|ZP_07630300.1| 30S ribosomal protein S6 [Clostridium cellulovorans 743B]
gi|302580012|gb|ADL54024.1| ribosomal protein S6 [Clostridium cellulovorans 743B]
Length = 95
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+ + + K I +++ +I+ GG V V+ G R +AY I K + +Y
Sbjct: 1 MNKYETLFIQNPSLDEEATKANIEKFKGIIENGGGTVENVDVWGRRKLAYEIAKVNEGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S E+ R RI + ++R + +
Sbjct: 61 TLINFSSDAQLPKELDRVFRITDGIIRHIIV 91
>gi|325066295|ref|ZP_08124968.1| ribosomal protein S6 [Actinomyces oris K20]
gi|326772817|ref|ZP_08232101.1| ribosomal protein S6 [Actinomyces viscosus C505]
gi|326637449|gb|EGE38351.1| ribosomal protein S6 [Actinomyces viscosus C505]
Length = 95
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+++ + P E+ R++ ++E VLR+
Sbjct: 61 AVVDMTTTPEIAQELDRQLGLNETVLRT 88
>gi|297572325|ref|YP_003698099.1| ribosomal protein S6 [Arcanobacterium haemolyticum DSM 20595]
gi|296932672|gb|ADH93480.1| ribosomal protein S6 [Arcanobacterium haemolyticum DSM 20595]
Length = 101
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ T+ + +++ GG + V+ LG R +AY I K + Y
Sbjct: 1 MRQYEMMIILDPETDERTLQGTLEKLLAVVPAEGGTLDNVDILGKRRLAYSINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V + + + PA E+ R++ ++E+++R+
Sbjct: 61 VVVYMTATPATAQELDRQLGLNESIMRT 88
>gi|282882860|ref|ZP_06291465.1| ribosomal protein S6 [Peptoniphilus lacrimalis 315-B]
gi|300813421|ref|ZP_07093769.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297271|gb|EFA89762.1| ribosomal protein S6 [Peptoniphilus lacrimalis 315-B]
gi|300512471|gb|EFK39623.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 94
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + D+ ++ + + + + I E G++ ++E GM+ +AY I ++AYY
Sbjct: 1 MNKYEAVIMFYPDVEEEKREASFTRIKG-IMEKHGKINNIDEWGMKKLAYEIDYYKEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F+ P I E+ R RI + ++R + + V+
Sbjct: 60 TFVEFDCDPEEIQEINRIARISDPIMRIMVIKVE 93
>gi|124026894|ref|YP_001016009.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL1A]
gi|166227363|sp|A2C5I5|RS6_PROM1 RecName: Full=30S ribosomal protein S6
gi|123961962|gb|ABM76745.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL1A]
Length = 138
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI +++ + +Y ++++++ EV G R +AY I K+++ YV +
Sbjct: 7 YETMYILRPDIPEEEVDSHLKKYSAILEKSETEVLDSQMRGKRRLAYPIAKHKEGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+ + ++R MR+ E+V+R +T+ D +P T + D ++ + P +
Sbjct: 67 SHKGNGQQVATLERAMRLSEDVIRYITVKQDGPLPTPKPT-SKEDETEKEEVKPTE 121
>gi|261414897|ref|YP_003248580.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371353|gb|ACX74098.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327117|gb|ADL26318.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 123
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ IS IK + + I GE+ ++ G R +AY I K + YY
Sbjct: 1 MRQYETMVIIDAMISDDAIKAEVETIAANITNGNGEILRRDDWGKRKLAYTINKRQHGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + + M+ ++++ENVLR +TL
Sbjct: 61 VIFYYKAEASVVANMEAALKLNENVLRWMTL 91
>gi|308235862|ref|ZP_07666599.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14018]
Length = 98
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLELVTKEGGSVDGTDYWGRRKLAYEIDGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + PA E+ R + ++E+V+R+ L D+
Sbjct: 66 NYTAEPALSDELDRVLNLNESVVRTKILRKDA 97
>gi|295394866|ref|ZP_06805079.1| 30S ribosomal protein S6 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972199|gb|EFG48061.1| 30S ribosomal protein S6 [Brevibacterium mcbrellneri ATCC 49030]
Length = 107
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L ++ + ++ T+ + +I GG V V+ G R AY I+K + YYV +
Sbjct: 15 YELMLILDSELDERSVETTVEKLLHVIPAEGGTVDNVDIWGRRRFAYEIQKKSEGYYVVV 74
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
+ + P E+ R++ I+E V+R+
Sbjct: 75 DFTANPDTTKELDRQLGINEIVVRT 99
>gi|154503454|ref|ZP_02040514.1| hypothetical protein RUMGNA_01278 [Ruminococcus gnavus ATCC 29149]
gi|153795554|gb|EDN77974.1| hypothetical protein RUMGNA_01278 [Ruminococcus gnavus ATCC 29149]
Length = 136
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I I + + +I GG V V+E G R AY I+K ++ +Y
Sbjct: 42 MNKYELAVVVSAKIEDDARAAVIEKVKEMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 101
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S + E+++++RI +NVLR L +
Sbjct: 102 YFVHFESDASVPGEIEQRIRIMDNVLRYLCV 132
>gi|224542223|ref|ZP_03682762.1| hypothetical protein CATMIT_01398 [Catenibacterium mitsuokai DSM
15897]
gi|224524858|gb|EEF93963.1| hypothetical protein CATMIT_01398 [Catenibacterium mitsuokai DSM
15897]
Length = 96
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVN--ELGMRTIAYRIRKNRKA 58
M YE + +L+ D+ + +++++ E G V V+ +LG+R +AY I+ K
Sbjct: 1 MNKYEIMMILKPDLEDDAKTALLDGFKAILTEGEGVVDNVDTEKLGLRELAYEIKDYTKG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
YV ++ + AI E +R RI+ +VLR LTL
Sbjct: 61 LYVVIDTHTTAEAIAEFERLSRINPSVLRHLTL 93
>gi|160881892|ref|YP_001560860.1| ribosomal protein S6 [Clostridium phytofermentans ISDg]
gi|160430558|gb|ABX44121.1| ribosomal protein S6 [Clostridium phytofermentans ISDg]
Length = 95
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + T+ + LI GG + V++ G + +AY I+K ++ YY
Sbjct: 1 MNKYELALVVNAKIEDEAKNATVEAVKELITRFGGNITNVDDWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ E+++++RI ENV+R L + D+
Sbjct: 61 YFIKFDGDSTTPSEVEQRIRIMENVIRFLCIRQDA 95
>gi|319951621|ref|YP_004162888.1| ssu ribosomal protein s6p [Cellulophaga algicola DSM 14237]
gi|319420281|gb|ADV47390.1| SSU ribosomal protein S6P [Cellulophaga algicola DSM 14237]
Length = 112
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + ++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIEETVKKFEDFLISKDAKMVSKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+S + + + R DE ++R LT+ +D H S
Sbjct: 61 HLFEFSSTGEVVSPFELEFRRDERIMRFLTVKLDKHAIS 99
>gi|262341103|ref|YP_003283958.1| 30S ribosomal protein S6 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272440|gb|ACY40348.1| 30S ribosomal protein S6 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 116
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE++ ++ +S Q K+T +Y++ + + G++ G++ +AY I+K + Y
Sbjct: 2 LKHYENIMIITPILSDDQAKETAKEYENYLIQKKGKIVYQEHWGLKKLAYPIQKKQSGCY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P + +++ K+R DE++LR LT+ ++ +
Sbjct: 62 HLFEFLLNPNLVSDLELKLRQDEHILRFLTIKLNKY 97
>gi|78186004|ref|YP_374047.1| 30S ribosomal protein S6 [Chlorobium luteolum DSM 273]
gi|91207927|sp|Q3B6M7|RS6_PELLD RecName: Full=30S ribosomal protein S6
gi|78165906|gb|ABB23004.1| SSU ribosomal protein S6P [Chlorobium luteolum DSM 273]
Length = 133
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V ++G R AY I+K Y
Sbjct: 5 KLYECTVIIDGGLQDEAIAAAMEMVQKVITEKGGSISSVLDIGRRKTAYPIKKKTIGSYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + I E++R +R +E +LR L + H SP L +++
Sbjct: 65 HIEFTAATPVIAEIERVLRYEEVLLRYLIV----HLTSPLLEMRK 105
>gi|255319500|ref|ZP_05360714.1| ribosomal protein S6 [Acinetobacter radioresistens SK82]
gi|262378476|ref|ZP_06071633.1| ribosomal protein S6 [Acinetobacter radioresistens SH164]
gi|255303440|gb|EET82643.1| ribosomal protein S6 [Acinetobacter radioresistens SK82]
gi|262299761|gb|EEY87673.1| ribosomal protein S6 [Acinetobacter radioresistens SH164]
Length = 128
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ MN+ + E++ R ++ ++R++ +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNVII 90
>gi|33864523|ref|NP_896083.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9313]
gi|61216285|sp|Q7V3T1|RS6_PROMM RecName: Full=30S ribosomal protein S6
gi|33641303|emb|CAE22433.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9313]
Length = 124
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I +++ YV
Sbjct: 7 YETMYILRPDIPEEEVETHVTKYREMVTEAGAEV-LDNQMRGKRRLAYPISNHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGNGQQVAVLEKAMRLSEDVIRYLTV 94
>gi|124024695|ref|YP_001019002.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9303]
gi|166227364|sp|A2CE27|RS6_PROM3 RecName: Full=30S ribosomal protein S6
gi|123964981|gb|ABM79737.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9303]
Length = 124
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G EV L N++ G R +AY I +++ YV
Sbjct: 7 YETMYILRPDIPEEEVETHVTKYREMVTEAGAEV-LDNQMRGKRRLAYPISNHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGNGQQVAVLEKAMRLSEDVIRYLTV 94
>gi|163842245|ref|YP_001626650.1| 30S ribosomal protein S6 [Renibacterium salmoninarum ATCC 33209]
gi|162955721|gb|ABY25236.1| SSU ribosomal protein S6P [Renibacterium salmoninarum ATCC 33209]
Length = 95
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 48/82 (58%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ ++ ++ + ++ T+ ++ ++I +GG V V+ G R +AY I+K + Y +N
Sbjct: 1 MVIIDPEVEERTVEPTLQKFLNVITTDGGTVDKVDIWGRRRLAYDIKKKSEGIYAVVNFT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRS 88
+ PA E+ R++ ++E +LR+
Sbjct: 61 AEPATAKELDRQLGLNETILRT 82
>gi|323358003|ref|YP_004224399.1| ribosomal protein S6 [Microbacterium testaceum StLB037]
gi|323274374|dbj|BAJ74519.1| ribosomal protein S6 [Microbacterium testaceum StLB037]
Length = 130
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + ++ +Q+ + + +I +GG + V+ G R +AY IRK + Y +
Sbjct: 5 YELMVIFDPEVDERQVAPKLDGFLKVITADGGTIDKVDIWGRRRLAYEIRKKNEGIYAVV 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + A +E+ R+++++E ++R+ L
Sbjct: 65 NFVATSEATNELDRQLKLNEQIMRTKVL 92
>gi|317152941|ref|YP_004120989.1| 30S ribosomal protein S6 [Desulfovibrio aespoeensis Aspo-2]
gi|316943192|gb|ADU62243.1| ribosomal protein S6 [Desulfovibrio aespoeensis Aspo-2]
Length = 103
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 50/88 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + LL +++ + K + S+++ GG + ++ G+R +AY ++K + YYV +
Sbjct: 12 YETLVLLSPELAEENRKGILDLLTSIVEREGGNMVETDDWGLRQLAYPVQKQTRGYYVRL 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+P + E++R +RI + + + +T+
Sbjct: 72 VYDAPGNLVAELERNIRITDGIFKFMTV 99
>gi|237839733|ref|XP_002369164.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211966828|gb|EEB02024.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221484546|gb|EEE22840.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504742|gb|EEE30407.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 163
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE L + + I+ + Q ++LI ++ G + V +LG R A+R+ K R+ +
Sbjct: 49 MVFYETFVLFSKRVQRADIRQLLKQQEALITKHHGSMLAVRDLGWRKTAFRVIKPRQGIF 108
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
F + + PAAI EM + ++ VLR T+ + T H RD
Sbjct: 109 WFGRLFYFSFGANPAAITEMSQSLQSTNGVLRHATVRMKKRHNLMTYNHHIHARD 163
>gi|212697310|ref|ZP_03305438.1| hypothetical protein ANHYDRO_01878 [Anaerococcus hydrogenalis DSM
7454]
gi|325848912|ref|ZP_08170422.1| ribosomal protein S6 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675759|gb|EEB35366.1| hypothetical protein ANHYDRO_01878 [Anaerococcus hydrogenalis DSM
7454]
gi|325480556|gb|EGC83618.1| ribosomal protein S6 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 94
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S ++ ++ ++ +I +NG EV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIYKPEVSDEERNKSLEIFKGIIADNG-EVESVDDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + I E +R++RI + +LR + +
Sbjct: 60 YIVDFKASGDHIKEFERRLRISDLILRFMVI 90
>gi|260436555|ref|ZP_05790525.1| ribosomal protein S6 [Synechococcus sp. WH 8109]
gi|260414429|gb|EEX07725.1| ribosomal protein S6 [Synechococcus sp. WH 8109]
Length = 127
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G +V L N++ G R +AY I K+++ YV
Sbjct: 10 YETMYILRPDIPEEEVESHLNKYRDMLVEAGADV-LDNQMRGKRRLAYPIAKHKEGIYVQ 68
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 69 LSHNGDGQHVAVLEKAMRLSEDVIRYLTV 97
>gi|257057876|ref|YP_003135708.1| 30S ribosomal protein S6P [Saccharomonospora viridis DSM 43017]
gi|256587748|gb|ACU98881.1| SSU ribosomal protein S6P [Saccharomonospora viridis DSM 43017]
Length = 111
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + + T+ + +I+ +GG V V+ G R +AY I K+ + Y +
Sbjct: 5 YEIMVILDPSLDERTVAPTLENFLQVIRSSGGTVEKVDVWGRRRLAYDIGKHSEGIYAVL 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
+ + P A+ E+ R++ + E V+R+
Sbjct: 65 ELYAEPEAVSELDRQLSLQETVMRT 89
>gi|88809379|ref|ZP_01124887.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805]
gi|88786598|gb|EAR17757.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805]
Length = 123
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G +V L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDILVETGADV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGDGQQVAVLEKAMRLSEDVIRYLTV 94
>gi|189345696|ref|YP_001942225.1| 30S ribosomal protein S6 [Chlorobium limicola DSM 245]
gi|226703437|sp|B3EEB2|RS6_CHLL2 RecName: Full=30S ribosomal protein S6
gi|189339843|gb|ACD89246.1| ribosomal protein S6 [Chlorobium limicola DSM 245]
Length = 133
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEAIAAAMEMVQKVITEKGGSISSVLEVGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + I +++ +R +E++LR L +
Sbjct: 65 HIEFTAAAPVIGAIEKVLRYEEDLLRYLII 94
>gi|283782808|ref|YP_003373562.1| ribosomal protein S6 [Gardnerella vaginalis 409-05]
gi|283441046|gb|ADB13512.1| ribosomal protein S6 [Gardnerella vaginalis 409-05]
Length = 98
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ +K QY L+ GG V + G R AY I + YV +
Sbjct: 6 YELMFIANPELDEHGLKKLTEQYLELVTNEGGSVDGTDYWGRRKFAYEIEGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + P+ E+ R + ++E+V+R+ L D+
Sbjct: 66 NYTAEPSVSDELDRVLNLNESVIRTKILRKDA 97
>gi|255535654|ref|YP_003096025.1| SSU ribosomal protein S6p [Flavobacteriaceae bacterium 3519-10]
gi|255341850|gb|ACU07963.1| SSU ribosomal protein S6p [Flavobacteriaceae bacterium 3519-10]
Length = 125
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ L+ + E+ G++ +AY I+ + +Y
Sbjct: 13 MNNYETVFILTPVLSDTQVEEAVQKFEDLLTSHNCEIVAKENWGLKKLAYPIQLKKNGFY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + +++ + DE ++R LT +D H
Sbjct: 73 TLIEFKGEGTVVADLELAFKRDERIIRFLTTKLDKH 108
>gi|39721604|dbj|BAD04094.1| ribosomal protein S6 [Onion yellows phytoplasma OY-M]
Length = 112
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ S+ +K Q++ + ++ NE+G++ +AY I ++K YY
Sbjct: 18 MKKYEIMYILRPNLDSKDVKKINDTLQNVFLQAPNQILEQNEIGLKDLAYLIDNHKKGYY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + + A+ E R ++I E ++R + +
Sbjct: 78 NWLMVKADNDAVLEFNRIVKITEEIIRFIFI 108
>gi|227502170|ref|ZP_03932219.1| ribosomal protein S6 [Corynebacterium accolens ATCC 49725]
gi|306834727|ref|ZP_07467794.1| 30S ribosomal protein S6 [Corynebacterium accolens ATCC 49726]
gi|227076994|gb|EEI14957.1| ribosomal protein S6 [Corynebacterium accolens ATCC 49725]
gi|304569398|gb|EFM44896.1| 30S ribosomal protein S6 [Corynebacterium accolens ATCC 49726]
Length = 99
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 52/92 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + + ++ +Y +++++GG+V ++ G R +AY I K + Y +
Sbjct: 7 YEVMIILDPNQDERTVTPSLDKYLDIVRKDGGKVENLDVWGKRRLAYPIEKKEEGIYAVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 67 NLECEHPSVSELDRRLNLNDTILRTKVLRTDS 98
>gi|291548587|emb|CBL24849.1| SSU ribosomal protein S6P [Ruminococcus torques L2-14]
Length = 95
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + I + +++I GG V V+E G R AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARAEVIEKVKAMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ + E+++++RI +NVLR L +
Sbjct: 61 YFIHFEAESTVPAEVEQRIRIMDNVLRYLCV 91
>gi|124361112|gb|ABN09084.1| Ribosomal protein S6 [Medicago truncatula]
Length = 294
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V+L+ + ++++ + Q ++E G V ++ GMR +AY+I+K A+Y+ M
Sbjct: 136 YEIVYLIHEK-HAEEVVAVNEKVQDFLREKKGRVWRFSDWGMRKLAYKIQKANNAHYILM 194
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N I+E+K + DE V+R L +
Sbjct: 195 NFEMDAKYINELKTLLDRDERVIRHLVI 222
>gi|300742673|ref|ZP_07072694.1| ribosomal protein S6 [Rothia dentocariosa M567]
gi|300381858|gb|EFJ78420.1| ribosomal protein S6 [Rothia dentocariosa M567]
Length = 100
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG + ++ G R +AY I+K + Y
Sbjct: 1 MRAYELMVILNPEVEDRAVEPSLSKFLEIVTNAGGTIDNLDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R + ++E+V+R+
Sbjct: 61 AVVNFTASPETAAELDRVLNLNESVMRT 88
>gi|254413750|ref|ZP_05027519.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
gi|196179347|gb|EDX74342.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
Length = 96
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+S +Q+ + +Y+ +QE GGE + G R +AY I ++R+ Y+ MN +PP
Sbjct: 1 MSEEQVNQAVTKYKDFLQEQGGEEIEIQHRGKRRLAYPIERHREGVYIQMNYKAPPIHEA 60
Query: 74 EMKRKMR 80
+++R MR
Sbjct: 61 QLQRAMR 67
>gi|193211784|ref|YP_001997737.1| 30S ribosomal protein S6 [Chlorobaculum parvum NCIB 8327]
gi|226703438|sp|B3QRL5|RS6_CHLP8 RecName: Full=30S ribosomal protein S6
gi|193085261|gb|ACF10537.1| ribosomal protein S6 [Chlorobaculum parvum NCIB 8327]
Length = 131
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE ++ + I + + I + G + V E+G R +AY I K+ YY
Sbjct: 4 LKQYECTVIIDGGLQDDAIAAAMELVKKTITDQGSVINNVLEVGRRKMAYLIGKSSVGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P+AI E++R R +EN+LR L + + S
Sbjct: 64 AHIEFDAAPSAIAEIERVFRYEENILRFLIIQLSS 98
>gi|169824838|ref|YP_001692449.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 29328]
gi|297587221|ref|ZP_06945866.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 53516]
gi|302379566|ref|ZP_07268051.1| ribosomal protein S6 [Finegoldia magna ACS-171-V-Col3]
gi|303234497|ref|ZP_07321134.1| ribosomal protein S6 [Finegoldia magna BVS033A4]
gi|226703469|sp|B0S2G9|RS6_FINM2 RecName: Full=30S ribosomal protein S6
gi|167831643|dbj|BAG08559.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 29328]
gi|297575202|gb|EFH93921.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 53516]
gi|302312473|gb|EFK94469.1| ribosomal protein S6 [Finegoldia magna ACS-171-V-Col3]
gi|302494331|gb|EFL54100.1| ribosomal protein S6 [Finegoldia magna BVS033A4]
Length = 95
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S + + Q +I ENG ++ V++ G R +AY I ++ YY
Sbjct: 1 MNKYELVLIFKPELSEEDRNTVFSRIQQVIDENG-KLEEVHDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N P + E++R+ R+ + ++R + + VD
Sbjct: 60 YIVNFDLDPQFVKEIERRCRLFDQIIRYMVVRVDEQ 95
>gi|72383153|ref|YP_292508.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL2A]
gi|91207930|sp|Q46I73|RS6_PROMT RecName: Full=30S ribosomal protein S6
gi|72003003|gb|AAZ58805.1| SSU ribosomal protein S6P [Prochlorococcus marinus str. NATL2A]
Length = 138
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 58/105 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI +++ + +Y +++++ EV G R +AY I K+++ YV +
Sbjct: 7 YETMYILRPDIPEEEVDSHLKKYSEILEKSETEVLDSQMRGKRRLAYPIAKHKEGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ + ++R MR+ E+V+R +T+ D +P T + ++
Sbjct: 67 SHKGNGQQVATLERAMRLSEDVIRYITVKQDGPLPTPKPTSKENE 111
>gi|254499289|ref|ZP_05111963.1| 30S ribosomal protein S6 [Legionella drancourtii LLAP12]
gi|254351486|gb|EET10347.1| 30S ribosomal protein S6 [Legionella drancourtii LLAP12]
Length = 106
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+FL+ D S+Q+ + +Y+ +I ++ G + +LG R +AY I KA+Y MNI
Sbjct: 1 MFLVHPD-QSEQVPAMVERYEGIISKHSGLIHRKEDLGRRQLAYPINDVHKAHYYLMNIE 59
Query: 67 SPPAAIHEMKRKMRIDENVLRSL 89
A+ E+K + ++ +LR+L
Sbjct: 60 CSLEALEEIKNAFKFNDAILRNL 82
>gi|139439451|ref|ZP_01772892.1| Hypothetical protein COLAER_01912 [Collinsella aerofaciens ATCC
25986]
gi|133775230|gb|EBA39050.1| Hypothetical protein COLAER_01912 [Collinsella aerofaciens ATCC
25986]
Length = 97
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + + I E G+V V+E G R +AY I Y
Sbjct: 1 MKAYELLFFVDPSLDPETRLAVMKRIDTTIAEGAGKVDSVDEWGKRKLAYEINDLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPTQIAELDRVLRITDAVVRHMIVRRDDQE 97
>gi|325105011|ref|YP_004274665.1| SSU ribosomal protein S6P [Pedobacter saltans DSM 12145]
gi|324973859|gb|ADY52843.1| SSU ribosomal protein S6P [Pedobacter saltans DSM 12145]
Length = 121
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L +S + K+ I + ++ +NG E+ + G++ +AY I K YY
Sbjct: 1 MGQYETTIILTPLLSEEAAKEVIANFSKILTDNGAEIVQEDNWGLKKLAYPIEKKSTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I + + +++ DE V+R LT+ +D H
Sbjct: 61 HITEYKVSGEVIGKYELELKRDERVMRFLTVKLDKH 96
>gi|311115043|ref|YP_003986264.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14019]
gi|310946537|gb|ADP39241.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14019]
Length = 131
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV +
Sbjct: 39 YELMFIADPELDERGLKKLTEQYLELVTKEGGSVDGTDYWGRRKLAYEIDGKTEGNYVVV 98
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + PA E+ R + ++E+V+R+ L D+
Sbjct: 99 NYTAEPALSDELDRVLNLNESVVRTKILRKDA 130
>gi|154488161|ref|ZP_02029278.1| hypothetical protein BIFADO_01733 [Bifidobacterium adolescentis
L2-32]
gi|212715364|ref|ZP_03323492.1| hypothetical protein BIFCAT_00258 [Bifidobacterium catenulatum
DSM 16992]
gi|225352540|ref|ZP_03743563.1| hypothetical protein BIFPSEUDO_04163 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|154083634|gb|EDN82679.1| hypothetical protein BIFADO_01733 [Bifidobacterium adolescentis
L2-32]
gi|212661670|gb|EEB22245.1| hypothetical protein BIFCAT_00258 [Bifidobacterium catenulatum
DSM 16992]
gi|225156734|gb|EEG70128.1| hypothetical protein BIFPSEUDO_04163 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 95
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY + + GG V ++ G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N ++ PA E+ R + ++E+V+R+ L
Sbjct: 66 NYSAEPATSDELDRLLNLNESVIRTKIL 93
>gi|325295183|ref|YP_004281697.1| 30S ribosomal protein S6 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065631|gb|ADY73638.1| 30S ribosomal protein S6 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 126
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V++LR +S ++I+ I + S ++ GEV +++ G R +AY I + YYV
Sbjct: 6 YEMVYILRPTMSDEEIEKGIEKVNSYVERYNGEVLHIDKWGRRELAYPINDYDRGYYVLE 65
Query: 64 NIASPP-AAIHEMKRKMRIDENVLRSLTL 91
I + + M+ RI+E+V+R LT
Sbjct: 66 YIKTNDRDFVKNMENFFRINEDVIRFLTF 94
>gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC
15703]
gi|118766085|dbj|BAF40264.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC
15703]
Length = 96
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY + + GG V ++ G R +AY I + YV +
Sbjct: 7 YELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTEGNYVVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N ++ PA E+ R + ++E+V+R+ L
Sbjct: 67 NYSAEPATSDELDRLLNLNESVIRTKIL 94
>gi|218245582|ref|YP_002370953.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 8801]
gi|226703449|sp|B7JXP0|RS6_CYAP8 RecName: Full=30S ribosomal protein S6
gi|218166060|gb|ACK64797.1| ribosomal protein S6 [Cyanothece sp. PCC 8801]
Length = 124
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR +S +Q+ + +Y+ + E + V G R +AY I++ YV M
Sbjct: 5 YEMIYILRPSLSEEQVNQEVNKYRDFLNEYNVKDLQVKIWGKRRLAYPIKRFIDGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + ++R MR+ E V+R +TL V++
Sbjct: 65 NYQGEGNQVAPLERAMRLSEEVIRYMTLKVET 96
>gi|308234047|ref|ZP_07664784.1| ribosomal protein S6 [Atopobium vaginae DSM 15829]
Length = 97
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQ-YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
MK YE ++ + S+++ +D + + + ++ENGG + V + G +AY I K +
Sbjct: 1 MKAYELLYFVSPS-STEEARDAVAKRIDTTVKENGGVIDNVEDWGKHKLAYEIDKLTEGD 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y ++ + P I E+ R +RI++ V+R + +
Sbjct: 60 YTLIDFHADPTQIAELNRVLRINDTVVRHMIV 91
>gi|33867041|ref|NP_898600.1| 30S ribosomal protein S6 [Synechococcus sp. WH 8102]
gi|61216277|sp|Q7U3C1|RS6_SYNPX RecName: Full=30S ribosomal protein S6
gi|33639642|emb|CAE09026.1| 30S ribosomal protein S6 [Synechococcus sp. WH 8102]
Length = 127
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G +V L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDMLVEAGADV-LDNQMRGKRRLAYPIDKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGDGQQVAVLEKAMRLSEDVIRYLTV 94
>gi|161611250|ref|NP_950261.2| 30S ribosomal protein S6 [Onion yellows phytoplasma OY-M]
gi|61216244|sp|Q6YRK5|RS6_ONYPE RecName: Full=30S ribosomal protein S6
Length = 95
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ S+ +K Q++ + ++ NE+G++ +AY I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDSKDVKKINDTLQNVFLQAPNQILEQNEIGLKDLAYLIDNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + + A+ E R ++I E ++R + +
Sbjct: 61 NWLMVKADNDAVLEFNRIVKITEEIIRFIFI 91
>gi|311112590|ref|YP_003983812.1| 30S ribosomal protein S6 [Rothia dentocariosa ATCC 17931]
gi|310944084|gb|ADP40378.1| 30S ribosomal protein S6 [Rothia dentocariosa ATCC 17931]
Length = 119
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG + ++ G R +AY I+K + Y
Sbjct: 20 MRAYELMVILNPEVEDRAVEPSLSKFLEIVTNAGGTIDNLDIWGRRRLAYEIQKKSEGIY 79
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R + ++E+V+R+
Sbjct: 80 AVVNFTASPETAAELDRVLNLNESVMRT 107
>gi|325116159|emb|CBZ51713.1| unnamed protein product [Neospora caninum Liverpool]
Length = 115
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE L + + I+ + Q ++LI ++ G + V +LG R A+R+ K R+ +
Sbjct: 1 MVFYETFVLFSKRVQRADIRQLLKQQEALITKHHGSMLAVRDLGWRKTAFRVIKPRQGIF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
F + + PAAI EM + ++ VLR T+ + T H RD
Sbjct: 61 WFGRLFYFSFGANPAAITEMSQSLQSTNGVLRHATVRMKKRHNLMTYNHYIHARD 115
>gi|256545550|ref|ZP_05472910.1| 30S ribosomal protein S6 [Anaerococcus vaginalis ATCC 51170]
gi|256398761|gb|EEU12378.1| 30S ribosomal protein S6 [Anaerococcus vaginalis ATCC 51170]
Length = 94
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S ++ ++ ++ +I E+G EV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIYKPEVSDEERNKSLEIFKGIIAESG-EVESVDDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + I E +R++RI + +LR + +
Sbjct: 60 YIVDFKASGDHIKEFERRLRISDLILRYMVI 90
>gi|225386695|ref|ZP_03756459.1| hypothetical protein CLOSTASPAR_00443 [Clostridium asparagiforme
DSM 15981]
gi|225047222|gb|EEG57468.1| hypothetical protein CLOSTASPAR_00443 [Clostridium asparagiforme
DSM 15981]
Length = 95
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ + + + I GG V V+E G + +AY I+K +AYY
Sbjct: 1 MNKYELTVVLNVKLEDEERAAALEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + VD+
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVRVDA 95
>gi|149071980|ref|YP_001293512.1| ribosomal protein S6 [Rhodomonas salina]
gi|134302931|gb|ABO70735.1| ribosomal protein S6 [Rhodomonas salina]
Length = 99
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++++ ++S + I YQ L+ E G + + G R + Y I K R Y+ M
Sbjct: 8 YETIYIIKPNLSEDNLLKIIENYQGLLIERGAKNIVTQNRGRRGLKYLINKFRDGVYIQM 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
N + + +++ MRI+E+V+R LT
Sbjct: 68 NYEANGEVVDFIEKSMRINEDVIRFLT 94
>gi|328949626|ref|YP_004366961.1| 30S ribosomal protein S6 [Marinithermus hydrothermalis DSM 14884]
gi|328449950|gb|AEB10851.1| 30S ribosomal protein S6 [Marinithermus hydrothermalis DSM 14884]
Length = 102
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ Q++ Q ++ G EV+ V E G R +AY I+K+ + YY
Sbjct: 1 MPQYDVNIILNPNLEPNQLQFEKDMIQQALERFGAEVKGVEEWGNRRLAYPIQKDTQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+F + PA ++ ++R+ +NV R L +
Sbjct: 61 LFYTVELEPAKAKPLENELRVRDNVRRVLIV 91
>gi|295093123|emb|CBK82214.1| SSU ribosomal protein S6P [Coprococcus sp. ART55/1]
Length = 96
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + +S I++ + VNE G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVSAKIDEEARTAVVDKVKSYIEKANATITEVNECGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E+VLR L + +D+
Sbjct: 61 YFIQFDAEAGVPAQLEANIRIMESVLRYLCVRLDAE 96
>gi|289422468|ref|ZP_06424311.1| ribosomal protein S6 [Peptostreptococcus anaerobius 653-L]
gi|289157040|gb|EFD05662.1| ribosomal protein S6 [Peptostreptococcus anaerobius 653-L]
Length = 96
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++++ + + + + +++I E GEV V+ G R +AY I+K R Y
Sbjct: 1 MKAYELLYIVKPTLDDEAREAVLESIKNIITEANGEVGEVDVWGSRKLAYPIQKFRDGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + E+ R+++I E+V+R + + D
Sbjct: 61 TLVNFKATVDFPKELDRRLKISEDVIRHIIVAQD 94
>gi|153816339|ref|ZP_01969007.1| hypothetical protein RUMTOR_02591 [Ruminococcus torques ATCC
27756]
gi|317502278|ref|ZP_07960449.1| ribosomal protein S6 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089021|ref|ZP_08337928.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846300|gb|EDK23218.1| hypothetical protein RUMTOR_02591 [Ruminococcus torques ATCC
27756]
gi|316896323|gb|EFV18423.1| ribosomal protein S6 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330406473|gb|EGG85986.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 95
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + I + ++LI GG V V+E G R AY I+K + +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARANVIEKVKALITRFGGNVTDVDEWGKRRFAYEIQKMTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ + E+++++RI +NVLR L +
Sbjct: 61 YFVHFEAESTVPGEVEQRIRIMDNVLRYLCV 91
>gi|325282626|ref|YP_004255167.1| 30S ribosomal protein S6 [Deinococcus proteolyticus MRP]
gi|324314435|gb|ADY25550.1| 30S ribosomal protein S6 [Deinococcus proteolyticus MRP]
Length = 103
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L +IS++Q++ Q + GGE+ ++ELG R +AY I K R+ YY
Sbjct: 1 MAQYDLNLILNPNISAEQVETEKDFIQRAVTNAGGEITNLDELGNRRLAYAINKTREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I ++ +R+ +NV R L +
Sbjct: 61 LMYTITMAGNPEKDIASSLRLRDNVYRVLVV 91
>gi|78224040|ref|YP_385787.1| 30S ribosomal protein S6 [Geobacter metallireducens GS-15]
gi|91207916|sp|Q39RR2|RS6_GEOMG RecName: Full=30S ribosomal protein S6
gi|78195295|gb|ABB33062.1| SSU ribosomal protein S6P [Geobacter metallireducens GS-15]
Length = 118
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V +++ D+ ++K + +I G++ + + G+R +AY I K+ + Y ++
Sbjct: 5 YETVVIVQPDLGDDELKGLNAKVTDIIATMKGDLHRLEDWGVRKLAYPINKSARGRYYYV 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLR 87
A I E++R++R+D+ VLR
Sbjct: 65 RFDGDAALIAELERRLRLDDKVLR 88
>gi|167957467|ref|ZP_02544541.1| SSU ribosomal protein S6P [candidate division TM7 single-cell
isolate TM7c]
Length = 71
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE L+R D+ S I+ I + + ++++ GGE++ + G + +AY+IRK A Y
Sbjct: 1 MRKYELTVLIRPDLESD-IEAPINKVRDIVKKAGGEIKKEDNWGKKKLAYKIRKEDFAIY 59
Query: 61 VFMNIASPPAA 71
V+M+I P A
Sbjct: 60 VYMDIILPADA 70
>gi|88854482|ref|ZP_01129149.1| 30S ribosomal protein S6 [marine actinobacterium PHSC20C1]
gi|88816290|gb|EAR26145.1| 30S ribosomal protein S6 [marine actinobacterium PHSC20C1]
Length = 162
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 50/88 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +I + + ++ ++ ++I+ +GG + ++ G R +AY I K + Y +
Sbjct: 5 YELMVILDPEIDERTVAPSLDKFLNVIRNDGGSIDNIDIWGRRRLAYEINKKTEGIYAVV 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + A+ E+ R++++ E V+R+ L
Sbjct: 65 NFTAESASTDELDRQLKLSEAVMRTKVL 92
>gi|159904384|ref|YP_001551728.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9211]
gi|226695114|sp|A9BDR2|RS6_PROM4 RecName: Full=30S ribosomal protein S6
gi|159889560|gb|ABX09774.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9211]
Length = 172
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR I ++ + +Y +++ GGEV G R +AY I K+++ YV +
Sbjct: 7 YETMYILRPTIPEDEVDSHLKKYTEILESAGGEVLDSQMRGKRRLAYPIGKHKEGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I +++ MR+ E+V+R LT+ D
Sbjct: 67 SHQGDGQHIAVLEKAMRLTEDVIRYLTVKQDG 98
>gi|160931688|ref|ZP_02079082.1| hypothetical protein CLOLEP_00519 [Clostridium leptum DSM 753]
gi|156869333|gb|EDO62705.1| hypothetical protein CLOLEP_00519 [Clostridium leptum DSM 753]
Length = 98
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V ++ + + + + +++ LI+ N + V+E G R +AY I K +AYYV
Sbjct: 8 YETVLVISLKLGDEGVAAMVQKFKDLIEANA-TLESVDEWGKRRLAYLINKEAEAYYVLY 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N S E+ R +I + +LRSL +
Sbjct: 67 NFKSDAEFPAELDRIYKITDGILRSLII 94
>gi|297170211|gb|ADI21249.1| ribosomal protein S6 [uncultured myxobacterium HF0010_08B07]
Length = 94
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL + + + D I + LI +N G++ LG R +AY I A Y
Sbjct: 1 MQKYELMLLLNPN-TMDDVDDFIDSLKKLIADNKGDLLDTKLLGKRQLAYPINNMNYANY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +++ P ++ ++ K + D+NV R LT+
Sbjct: 60 VHLDVNVEPETLNLLEEKFKFDQNVFRHLTV 90
>gi|269792264|ref|YP_003317168.1| 30S ribosomal protein S6 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099899|gb|ACZ18886.1| ribosomal protein S6 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 94
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L D+ + + +++ G EV V+ G R +AY I K + Y
Sbjct: 1 MRPYELVTILTADLEDP--RSAAEELAEVLKSQGAEVEKVDLWGKRRLAYPISKKTEGVY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V N P+ I EM+R +R+ V+R L + D
Sbjct: 59 VLYNFKQKPSMIKEMERVLRLKPQVMRHLVVARD 92
>gi|255324072|ref|ZP_05365197.1| ribosomal protein S6 [Corynebacterium tuberculostearicum SK141]
gi|255298929|gb|EET78221.1| ribosomal protein S6 [Corynebacterium tuberculostearicum SK141]
Length = 96
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ ++ ++++ GG+V ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPNQDERTVTPSLDKFLEIVRQEGGKVENLDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 61 AVVNLECEHTSVAELDRRLNLNDTILRTKVLRTDS 95
>gi|240144657|ref|ZP_04743258.1| ribosomal protein S6 [Roseburia intestinalis L1-82]
gi|257203297|gb|EEV01582.1| ribosomal protein S6 [Roseburia intestinalis L1-82]
gi|291537108|emb|CBL10220.1| SSU ribosomal protein S6P [Roseburia intestinalis M50/1]
gi|291540343|emb|CBL13454.1| SSU ribosomal protein S6P [Roseburia intestinalis XB6B4]
Length = 96
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG V V E G + +AY I+K +A+Y
Sbjct: 1 MNKYELALVVSAKIEDDARTATVEKAKEYITRAGGNVTEVEEAGKKKLAYEIQKMSEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + E++R +RI +NVLR L +
Sbjct: 61 YFIQFDAASTVPAEVERDVRIMDNVLRFLVV 91
>gi|154482842|ref|ZP_02025290.1| hypothetical protein EUBVEN_00538 [Eubacterium ventriosum ATCC
27560]
gi|149736270|gb|EDM52156.1| hypothetical protein EUBVEN_00538 [Eubacterium ventriosum ATCC
27560]
Length = 96
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + ++LI++ GG + + E G + +AY I+K +A+Y
Sbjct: 1 MNKYELTVVVSAKLDDEGRTAEVEKVKALIEKFGGTITKIEEAGKKKLAYEIQKMSEAFY 60
Query: 61 VFMNIASPPAAI-HEMKRKMRIDENVLRSLTLLVDS 95
F++I + E++ ++RI ENV+R +T+ V++
Sbjct: 61 YFIDIDTENTDFPSELESQLRIMENVIRFMTVAVEA 96
>gi|298208562|ref|YP_003716741.1| 30S ribosomal protein S6 [Croceibacter atlanticus HTCC2559]
gi|83848485|gb|EAP86354.1| 30S ribosomal protein S6 [Croceibacter atlanticus HTCC2559]
Length = 112
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +++ + ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDEQIKETVKKFEDFLISKDAKMVNKEDWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I ++ R DE ++R LT+ +D H
Sbjct: 61 HLFEYQVAGEHIEPLEVLFRRDERIMRFLTVKLDKH 96
>gi|229817073|ref|ZP_04447355.1| hypothetical protein BIFANG_02328 [Bifidobacterium angulatum DSM
20098]
gi|229784862|gb|EEP20976.1| hypothetical protein BIFANG_02328 [Bifidobacterium angulatum DSM
20098]
Length = 98
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLELVTKEGGSVDEPDYWGRRKLAYEIAGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ PA E+ R + ++E+V+R+ L D+
Sbjct: 66 TYSAEPATSDELDRVLNLNESVIRTKILRKDA 97
>gi|158319094|ref|YP_001511601.1| ribosomal protein S6 [Alkaliphilus oremlandii OhILAs]
gi|167011242|sp|A8MED4|RS6_ALKOO RecName: Full=30S ribosomal protein S6
gi|158139293|gb|ABW17605.1| ribosomal protein S6 [Alkaliphilus oremlandii OhILAs]
Length = 94
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V++L+ ++ ++ + +++ +I+ +G + V+E G R +AY I K + YY
Sbjct: 1 MNKYELVYILKSNVEEEKRNQLLDKFRGIIEADGT-IENVDEWGNRRLAYEINKINEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N ++ E+ R ++I + V+R + +
Sbjct: 60 TLVNFSAAADVPKELDRNLKIADEVIRHMII 90
>gi|331212125|ref|XP_003307332.1| hypothetical protein PGTG_00282 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297735|gb|EFP74326.1| hypothetical protein PGTG_00282 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 117
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR---- 56
M LY L + ++ + +L++ NGG VR ++ LG R RIR
Sbjct: 1 MPLYSLSCLALHYSTYTPLRSLVHTAATLVESNGGLVRQIDYLGRRNTPQRIRAPGLVPG 60
Query: 57 ---KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+A Y M + P + E+ ++R+D VLR TLLV H + T Q
Sbjct: 61 GVGEADYWTMQFDANPPTVRELTNRLRVDPRVLRHTTLLVGMHTDDLSRTFQ 112
>gi|284047345|ref|YP_003397685.1| ribosomal protein S6 [Conexibacter woesei DSM 14684]
gi|283951566|gb|ADB54310.1| ribosomal protein S6 [Conexibacter woesei DSM 14684]
Length = 124
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+Y+ + LLR + ++ + I +NGG++ L E G+R +AY I R A Y
Sbjct: 6 PIYDLMLLLRTSVEDERRAQIRADVEQTIADNGGQIELTQEWGVRNLAYEIDHVRDAEYH 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + P + + ++I + VLR + V +P
Sbjct: 66 LLQFSGPAELVETLSYNLKIADGVLRHRIIKVTPGTPAP 104
>gi|148240853|ref|YP_001226240.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7803]
gi|166227397|sp|A5GPS8|RS6_SYNPW RecName: Full=30S ribosomal protein S6
gi|147849392|emb|CAK24943.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7803]
Length = 123
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI ++++ + +Y+ ++ E G +V L N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEEEVESHLTKYRDILVEAGADV-LDNQMRGKRRLAYPIAKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + +++ MR+ E+V+R LT+
Sbjct: 66 LSHNGDGQQVAVLEKVMRLSEDVIRYLTV 94
>gi|254796462|ref|YP_003081298.1| ribosomal protein S6 [Neorickettsia risticii str. Illinois]
gi|254589705|gb|ACT69067.1| ribosomal protein S6 [Neorickettsia risticii str. Illinois]
Length = 114
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE VFL +S + + + + + EN +V G +AYRI+ + KA Y
Sbjct: 5 IYECVFLASSSLSEGGVSNLMDNFNAAFAENNIKVLRQENWGSLALAYRIKNHTKANYFM 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSL 89
+++ P+A+ + + K++ ++ VLR L
Sbjct: 65 FVVSAEPSALQKFEAKLKYNDLVLRYL 91
>gi|226323518|ref|ZP_03799036.1| hypothetical protein COPCOM_01293 [Coprococcus comes ATCC 27758]
gi|225208202|gb|EEG90556.1| hypothetical protein COPCOM_01293 [Coprococcus comes ATCC 27758]
Length = 95
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + I + ++L+ GG + V+E G + +AY I+K ++AYY
Sbjct: 1 MSKYELAVVVSAKLEDDARAEVIEKVKALVTRFGGNITDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ S E++ ++RI + V+R L +
Sbjct: 61 YFIHFESETTTPGEIEERIRIMDGVIRYLCV 91
>gi|224282367|ref|ZP_03645689.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
gi|310286811|ref|YP_003938069.1| ribosomal protein S6 [Bifidobacterium bifidum S17]
gi|311063709|ref|YP_003970434.1| 30S ribosomal protein S6P RpsF [Bifidobacterium bifidum PRL2010]
gi|313139511|ref|ZP_07801704.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
gi|309250747|gb|ADO52495.1| ribosomal protein S6 [Bifidobacterium bifidum S17]
gi|310866028|gb|ADP35397.1| RpsF SSU ribosomal protein S6P [Bifidobacterium bifidum PRL2010]
gi|313132021|gb|EFR49638.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
Length = 98
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLELVTKEGGSVENTDIWGRRKLAYEIDGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + P E+ R + ++E+V+R+ L D+
Sbjct: 66 NYTTTPEVSAELDRVLNLNESVVRTKILRKDA 97
>gi|110003928|emb|CAK98268.1| putative 30s ribosomal protein s6 [Spiroplasma citri]
Length = 149
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L + ++ + + + +++ NGG++ + G++ + Y I+K K YY
Sbjct: 1 MRKYEIMYILNPEATN--LDELESKLHQILEANGGKIEEHGKWGIKDLVYPIKKKTKGYY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-----RHDRDDRNDR 115
+ + + I E R I+++VLR L + + + T+ ++D+ DR DR
Sbjct: 59 GVLIVNTTSVNIDEFVRISHIEQDVLRILVINTEKEKGYIQSTVYAKTEVKNDKPDR-DR 117
Query: 116 FPRDRNVDRKQH 127
P +R D K+H
Sbjct: 118 KPGNRKPDYKRH 129
>gi|229825618|ref|ZP_04451687.1| hypothetical protein GCWU000182_00980 [Abiotrophia defectiva ATCC
49176]
gi|229790181|gb|EEP26295.1| hypothetical protein GCWU000182_00980 [Abiotrophia defectiva ATCC
49176]
Length = 95
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + L+ GG + V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKIEDEARNKVLEDVKGLVTRFGGTITDVEEWGKKKLAYEIQKMSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F++ + A E++ ++RI ENVLR L +
Sbjct: 61 YFIHFEAESTAPGEIESRIRIMENVLRFLCV 91
>gi|319789280|ref|YP_004150913.1| ribosomal protein S6 [Thermovibrio ammonificans HB-1]
gi|317113782|gb|ADU96272.1| ribosomal protein S6 [Thermovibrio ammonificans HB-1]
Length = 126
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V++LR +S ++ I + S ++ GGEV V++ G R +AY I K +YV
Sbjct: 6 YEMVYILRPTMSDEETNAAIEKVNSYVERYGGEVLKVDKWGKRQLAYPINDYDKGFYVLE 65
Query: 64 NIASPP-AAIHEMKRKMRIDENVLRSLTL 91
I + + M+ RI+E+V+R L
Sbjct: 66 YIRTDKRDFVRNMENFFRINEDVIRFLLF 94
>gi|295099559|emb|CBK88648.1| ribosomal protein S6 [Eubacterium cylindroides T2-87]
Length = 97
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + Q + I N G + V++ G++ AY I +K +Y
Sbjct: 1 MKKYEIMYIINASLDEAQFTAVQDRLHQTITNNQGTIDNVDDWGIKEFAYEIDHMKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N+ + I E +R RI NV+R + +
Sbjct: 61 VVINVTANNEGIAEFQRLSRISNNVVRIMVV 91
>gi|239624858|ref|ZP_04667889.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521244|gb|EEQ61110.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 95
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + Q + + + I GG V V+E G + +AY I+K +A+Y
Sbjct: 1 MNKYELTVVLNVKLEDDQRAAALEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + VD+
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVRVDA 95
>gi|295698470|ref|YP_003603125.1| 30S ribosomal protein S6 [Candidatus Riesia pediculicola USDA]
gi|291157301|gb|ADD79746.1| 30S ribosomal protein S6 [Candidatus Riesia pediculicola USDA]
Length = 136
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V ++ D S +I + ++ ++E G + + + G + ++Y I K KA+Y
Sbjct: 14 MNHYEIVLMIHPD-KSNRIDKILTSLKNNVKEMSGTIHRLEDWGRKQLSYPIFKLHKAHY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+ +N+ I E+K + R +E+++R++ L V+ P+L I
Sbjct: 73 ILINLEISKEFIQEIKDEFRSEESIIRNIILKVNKPISKPSLMI 116
>gi|284047423|ref|YP_003397762.1| ribosomal protein S6 [Acidaminococcus fermentans DSM 20731]
gi|283951644|gb|ADB46447.1| ribosomal protein S6 [Acidaminococcus fermentans DSM 20731]
Length = 94
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + ++ L+ NG + ++ G + +AY I+ Y
Sbjct: 1 MNNYEVMYIVKP-VEEDAFNAVVKKFDDLLVANGATIEKTDKWGKKRLAYAIQDFNDGLY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V A+ PAA+ E+ R M+I +++LR + +
Sbjct: 60 VLTTFAAEPAAVKELDRVMKITDDILRHMII 90
>gi|160940067|ref|ZP_02087412.1| hypothetical protein CLOBOL_04956 [Clostridium bolteae ATCC
BAA-613]
gi|158436647|gb|EDP14414.1| hypothetical protein CLOBOL_04956 [Clostridium bolteae ATCC
BAA-613]
Length = 95
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + +Q I + + I GG V V+E G + +AY I+K +AYY
Sbjct: 1 MNKYELTVVLNVKLEDEQRAAAIEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + ++
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVKAEA 95
>gi|21674944|ref|NP_663009.1| 30S ribosomal protein S6 [Chlorobium tepidum TLS]
gi|25009197|sp|Q8KAM1|RS6_CHLTE RecName: Full=30S ribosomal protein S6
gi|21648174|gb|AAM73351.1| ribosomal protein S6 [Chlorobium tepidum TLS]
Length = 131
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+K YE ++ + I + + + + GG + V E+G R +AY IRK YY
Sbjct: 4 LKQYECTVIIDGGLQDDAIAAVMELVKKTVTDKGGVINNVLEVGRRKMAYLIRKTSIGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P+ I E++R R +E +LR L + + S
Sbjct: 64 AHIEFDAVPSVIAEIERVFRYEEAILRFLIIQLSS 98
>gi|218961879|ref|YP_001741654.1| 30S ribosomal protein S6 [Candidatus Cloacamonas acidaminovorans]
gi|167730536|emb|CAO81448.1| 30S ribosomal protein S6 [Candidatus Cloacamonas acidaminovorans]
Length = 95
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +S+ + +L+ ENGGE+ ++ G R +AY I+K R+ YY
Sbjct: 5 YELMVILVPTLSADEANAINDSLMALVTENGGEIIKIDPWGKRMLAYPIKKFREGYYFVD 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
I ++K I+EN++R L
Sbjct: 65 YFRVDSLVIKKLKALFNINENIIRYL 90
>gi|116664773|gb|ABK13802.1| ribosomal protein S6 [Coxiella endosymbiont of Amblyomma
americanum]
Length = 105
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S Q+ I +YQS+I+E+G + + + G R +AYR+++ KA+Y+ +NI + ++
Sbjct: 7 SSQVLQMIERYQSMIRESGSRIHRLEDWGRRQLAYRLKEVHKAHYILINIECSGIVLSDL 66
Query: 76 KRKMRIDENVLRSLTLLVDSH 96
++ ++ + +L SH
Sbjct: 67 VTAFHYNDAIMTTSLILKRSH 87
>gi|257058628|ref|YP_003136516.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 8802]
gi|256588794|gb|ACU99680.1| ribosomal protein S6 [Cyanothece sp. PCC 8802]
Length = 124
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR +S +Q+ + +Y+ + + + V G R +AY I++ YV M
Sbjct: 5 YEMIYILRPSLSEEQVNQEVNKYRDFLNDYNVKDLQVKIWGKRRLAYPIKRFIDGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + ++R MR+ E V+R +TL V++
Sbjct: 65 NYQGEGNQVAPLERAMRLSEEVIRYMTLKVET 96
>gi|328943444|ref|ZP_08240909.1| 30S ribosomal protein S6 [Atopobium vaginae DSM 15829]
gi|327491413|gb|EGF23187.1| 30S ribosomal protein S6 [Atopobium vaginae DSM 15829]
Length = 113
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQ-YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
+K YE ++ + S+++ +D + + + ++ENGG + V + G +AY I K +
Sbjct: 17 LKAYELLYFVSPS-STEEARDAVAKRIDTTVKENGGVIDNVEDWGKHKLAYEIDKLTEGD 75
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y ++ + P I E+ R +RI++ V+R + +
Sbjct: 76 YTLIDFHADPTQIAELNRVLRINDTVVRHMIV 107
>gi|119358280|ref|YP_912924.1| 30S ribosomal protein S6 [Chlorobium phaeobacteroides DSM 266]
gi|166226819|sp|A1BJC3|RS6_CHLPD RecName: Full=30S ribosomal protein S6
gi|119355629|gb|ABL66500.1| SSU ribosomal protein S6P [Chlorobium phaeobacteroides DSM 266]
Length = 133
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I + GG + V E+G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEVIAAAMEMVQKVIADKGGSISSVLEVGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + I E+++ +R +E ++R L +
Sbjct: 65 HIEFTAGTSVIAEIEKVLRYEEALMRYLII 94
>gi|291520309|emb|CBK75530.1| SSU ribosomal protein S6P [Butyrivibrio fibrisolvens 16/4]
Length = 96
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG++ V++ G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKIEDDARTATVEKAKEYITRFGGQITDVDDWGKKRLAYEIQKMNEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F++ + P +++ +RI +NVLR L + D
Sbjct: 61 YFIHFDAEPGVPAQIEENIRIMDNVLRFLCVRAD 94
>gi|156081732|ref|XP_001608359.1| 30S ribosomal protein S6, puatative [Plasmodium vivax SaI-1]
gi|148800930|gb|EDL42335.1| 30S ribosomal protein S6, puatative [Plasmodium vivax]
Length = 243
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
L + + +IK I +Y ++ GE LG R + I+K +AYYV +
Sbjct: 128 LFSCNFTISEIKKKIAEYTYELKLVDGEAFRALYLGKRRLVRPIKKQMEAYYVLFSFQMY 187
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
P+ IHE+KRK+R+ + VLR +V +E++
Sbjct: 188 PSLIHEIKRKLRLQDAVLR---FMVTKNEKT 215
>gi|163815609|ref|ZP_02206982.1| hypothetical protein COPEUT_01784 [Coprococcus eutactus ATCC
27759]
gi|158449246|gb|EDP26241.1| hypothetical protein COPEUT_01784 [Coprococcus eutactus ATCC
27759]
Length = 96
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + +S I++ + VNE G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVSAKIDEEARTAVVDKVKSYIEKANATITDVNECGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E+VLR L + +D+
Sbjct: 61 YFIQFDADADVPAQLEANIRIMESVLRYLCVRLDAE 96
>gi|331083587|ref|ZP_08332698.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403798|gb|EGG83350.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 95
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + I G V V E G + +AY I+K R+ YY
Sbjct: 1 MNKYELALVVNAKIDDEARAAVVEKAKDYIARYNGTVTEVEEWGKKRLAYEIQKMREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ S A E++ ++RI +NVLR L +
Sbjct: 61 YFIQFESDAACPAEVEGRIRIMDNVLRYLVV 91
>gi|88608090|ref|YP_505963.1| ribosomal protein S6 [Neorickettsia sennetsu str. Miyayama]
gi|88600259|gb|ABD45727.1| ribosomal protein S6 [Neorickettsia sennetsu str. Miyayama]
Length = 114
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE VFL +S + + + + + EN +V G +AYR++ + KA Y
Sbjct: 5 IYECVFLASSSLSEGGVSNLMDNFNAAFAENSIKVLRQENWGSLALAYRVKNHTKANYFM 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSL 89
I++ P A+ + + K++ ++ VLR L
Sbjct: 65 FVISAEPLALQKFEAKLKYNDLVLRYL 91
>gi|291165939|gb|EFE27986.1| 30S ribosomal protein S6 [Filifactor alocis ATCC 35896]
Length = 95
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ ++ + + + Q++++E E+ V+ G R +AY I+ YY
Sbjct: 1 MRNYELIYILKPNLEEDVKEAVLAKVQAIVEEGKAEIEKVDVWGNRKLAYEIQDFTDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + E+ R ++I + V+R + +
Sbjct: 61 VLINFKAGVDVPKEIDRNLKISDAVIRHMIV 91
>gi|307244717|ref|ZP_07526819.1| ribosomal protein S6 [Peptostreptococcus stomatis DSM 17678]
gi|306491894|gb|EFM63945.1| ribosomal protein S6 [Peptostreptococcus stomatis DSM 17678]
Length = 96
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++++ + + + + +++I E GEV ++ G R +AY I K R Y
Sbjct: 1 MKAYEVLYIVKPTLDDEAREAVLDSIKNIITEAKGEVGEIDVWGSRKLAYPIEKFRDGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + E+ R+++I E+V+R + +
Sbjct: 61 TLVNFKADVEFPKELDRRLKISEDVIRHVIV 91
>gi|260587269|ref|ZP_05853182.1| ribosomal protein S6 [Blautia hansenii DSM 20583]
gi|260542464|gb|EEX23033.1| ribosomal protein S6 [Blautia hansenii DSM 20583]
Length = 156
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + I G V V E G + +AY I+K R+ YY
Sbjct: 62 MNKYELALVVNAKIDDEARAAVVEKAKDYIARYNGTVTEVEEWGKKRLAYEIQKMREGYY 121
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ S A E++ ++RI +NVLR L +
Sbjct: 122 YFIQFESDAACPAEVEGRIRIMDNVLRYLVV 152
>gi|300172596|ref|YP_003771761.1| 30S ribosomal protein S6 [Leuconostoc gasicomitatum LMG 18811]
gi|299886974|emb|CBL90942.1| 30S ribosomal protein S6 [Leuconostoc gasicomitatum LMG 18811]
Length = 98
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ S K + ++ S++ +NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLESDAKKALVERFDSILTDNGATITKSADWATRRFAYEIAGYREGVYHII 64
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N A AAI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDAAINEFDRLAKISQDILRHMIIKRDA 97
>gi|303232315|ref|ZP_07319010.1| ribosomal protein S6 [Atopobium vaginae PB189-T1-4]
gi|302481572|gb|EFL44637.1| ribosomal protein S6 [Atopobium vaginae PB189-T1-4]
Length = 97
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + + + + I E G V V + G R +AY I K + Y
Sbjct: 1 MKAYELLYFVSPSATDEVRAAVAKRIDDTITEQSGVVDSVEDWGKRKLAYEINKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + PA I E+ R +RI++ V+R + +
Sbjct: 61 TLINFHADPAHIAELDRVLRINDTVVRHMIV 91
>gi|311740294|ref|ZP_07714125.1| 30S ribosomal protein S6 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304677|gb|EFQ80749.1| 30S ribosomal protein S6 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 99
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 51/92 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + + ++ ++ ++++ GG+V ++ G R +AY I K + Y +
Sbjct: 7 YEVMIILDPNQDERTVTPSLDKFLEIVRQEGGKVENLDVWGKRRLAYPINKKEEGIYAVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 67 NLECEHTSVAELDRRLNLNDTILRTKVLRTDS 98
>gi|323487704|ref|ZP_08092962.1| 30S ribosomal protein S6 [Planococcus donghaensis MPA1U2]
gi|323398438|gb|EGA91226.1| 30S ribosomal protein S6 [Planococcus donghaensis MPA1U2]
Length = 95
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ I + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MREYELMYIIQPAIEEEAKKALVERFNDILTTNGAEIIESKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + AI+E R I+E+++R + + D+
Sbjct: 61 QIVKVNAGSEAINEYTRLANINEDIIRHIAVRKDA 95
>gi|312144684|ref|YP_003996130.1| ribosomal protein S6 [Halanaerobium sp. 'sapolanicus']
gi|311905335|gb|ADQ15776.1| ribosomal protein S6 [Halanaerobium sp. 'sapolanicus']
Length = 99
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE F+L+ D+ ++ + + + ++ I ++ GE+ V+ G R +AY I+ R Y +
Sbjct: 8 YETTFVLKPDLEDEEKEQILTRVKNTILDHDGEITEVDAWGKRQLAYEIKDYRSGDYTIL 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + + E++R +I + V+R L +
Sbjct: 68 EMNAKTSVVKELERIFKIMDGVIRYLVV 95
>gi|300780220|ref|ZP_07090076.1| 30S ribosomal protein S6 [Corynebacterium genitalium ATCC 33030]
gi|300534330|gb|EFK55389.1| 30S ribosomal protein S6 [Corynebacterium genitalium ATCC 33030]
Length = 99
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 50/92 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + YV +
Sbjct: 7 YEVMIILDPSQDERTVAPSLDKFLDIVRQDNGKVENVDVWGKRRLAYPIDKKEEGVYVVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ + E+ R++ +++ ++R+ L DS
Sbjct: 67 NLDCAAETVQELDRRLNLNDTIMRTKVLRTDS 98
>gi|291530828|emb|CBK96413.1| SSU ribosomal protein S6P [Eubacterium siraeum 70/3]
Length = 97
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V + +K + ++ LI+E+G V V+E G R +AY I YYV
Sbjct: 8 YEAVVVFSLKNGEDAVKALVAKFSDLIKEHGTLVD-VDEWGARKLAYEINYETDGYYVVY 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
+ S P E +R + I + V+RSL
Sbjct: 67 SFDSKPDFPMEFERIINITDGVIRSLV 93
>gi|126701291|ref|YP_001090188.1| 30S ribosomal protein S6 [Clostridium difficile 630]
gi|254977324|ref|ZP_05273796.1| 30S ribosomal protein S6 [Clostridium difficile QCD-66c26]
gi|255094655|ref|ZP_05324133.1| 30S ribosomal protein S6 [Clostridium difficile CIP 107932]
gi|255102881|ref|ZP_05331858.1| 30S ribosomal protein S6 [Clostridium difficile QCD-63q42]
gi|255308701|ref|ZP_05352872.1| 30S ribosomal protein S6 [Clostridium difficile ATCC 43255]
gi|255316408|ref|ZP_05357991.1| 30S ribosomal protein S6 [Clostridium difficile QCD-76w55]
gi|255519067|ref|ZP_05386743.1| 30S ribosomal protein S6 [Clostridium difficile QCD-97b34]
gi|255652251|ref|ZP_05399153.1| 30S ribosomal protein S6 [Clostridium difficile QCD-37x79]
gi|255657620|ref|ZP_05403029.1| 30S ribosomal protein S6 [Clostridium difficile QCD-23m63]
gi|260685205|ref|YP_003216490.1| 30S ribosomal protein S6 [Clostridium difficile CD196]
gi|260688864|ref|YP_003219998.1| 30S ribosomal protein S6 [Clostridium difficile R20291]
gi|296452699|ref|ZP_06894390.1| 30S ribosomal protein S6 [Clostridium difficile NAP08]
gi|296880047|ref|ZP_06904017.1| 30S ribosomal protein S6 [Clostridium difficile NAP07]
gi|306521966|ref|ZP_07408313.1| 30S ribosomal protein S6 [Clostridium difficile QCD-32g58]
gi|123066511|sp|Q181R5|RS6_CLOD6 RecName: Full=30S ribosomal protein S6
gi|115252728|emb|CAJ70572.1| 30S ribosomal protein S6 [Clostridium difficile]
gi|260211368|emb|CBA67011.1| 30S ribosomal protein S6 [Clostridium difficile CD196]
gi|260214881|emb|CBE07677.1| 30S ribosomal protein S6 [Clostridium difficile R20291]
gi|296258481|gb|EFH05385.1| 30S ribosomal protein S6 [Clostridium difficile NAP08]
gi|296429024|gb|EFH14901.1| 30S ribosomal protein S6 [Clostridium difficile NAP07]
Length = 92
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++++ + S +++++ I + GE+ V+ G + +AY I K + +Y
Sbjct: 1 MRNYELVYVVKPN-SDEEVREAILNKVKEVVATDGEIVKVDTWGTKKLAYPIAKFTEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +N S E+ R ++I+ENV+R + ++
Sbjct: 60 VLVNFKSAVDVPKEIDRNLKINENVIRHMIVV 91
>gi|257070271|ref|YP_003156526.1| 30S ribosomal protein S6P [Brachybacterium faecium DSM 4810]
gi|256561089|gb|ACU86936.1| SSU ribosomal protein S6P [Brachybacterium faecium DSM 4810]
Length = 96
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L + + + T + +I GG + V+ G R AY I K + Y
Sbjct: 1 MRKYEMVVILDPSVDERTVTGTFEKLVQVIPTEGGTIDNVDVWGKRKFAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ ++ + + E+ R++ ++E+V+R+ + +D
Sbjct: 61 IVLSFTAKASTAQELDRQLGLNESVMRTKVMRLD 94
>gi|167750473|ref|ZP_02422600.1| hypothetical protein EUBSIR_01449 [Eubacterium siraeum DSM 15702]
gi|167656624|gb|EDS00754.1| hypothetical protein EUBSIR_01449 [Eubacterium siraeum DSM 15702]
gi|291557665|emb|CBL34782.1| SSU ribosomal protein S6P [Eubacterium siraeum V10Sc8a]
Length = 97
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V + +K + ++ LI+E+G V V+E G R +AY I YYV
Sbjct: 8 YEAVVVFSLKNGEDAVKALVAKFSDLIKEHGTLVD-VDEWGARKLAYEINYETDGYYVVY 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
+ P E +R + I + VLRSL
Sbjct: 67 SFDCKPDFPMEFERIINITDGVLRSLV 93
>gi|16802092|ref|NP_463577.1| 30S ribosomal protein S6 [Listeria monocytogenes EGD-e]
gi|46906275|ref|YP_012664.1| 30S ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47092169|ref|ZP_00229961.1| ribosomal protein S6 [Listeria monocytogenes str. 4b H7858]
gi|47095112|ref|ZP_00232724.1| ribosomal protein S6 [Listeria monocytogenes str. 1/2a F6854]
gi|217965897|ref|YP_002351575.1| ribosomal protein S6 [Listeria monocytogenes HCC23]
gi|224498258|ref|ZP_03666607.1| 30S ribosomal protein S6 [Listeria monocytogenes Finland 1988]
gi|224503031|ref|ZP_03671338.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL R2-561]
gi|226222689|ref|YP_002756796.1| ribosomal protein S6 [Listeria monocytogenes Clip81459]
gi|254824727|ref|ZP_05229728.1| ribosomal protein S6 [Listeria monocytogenes FSL J1-194]
gi|254827475|ref|ZP_05232162.1| ribosomal protein S6 [Listeria monocytogenes FSL N3-165]
gi|254830663|ref|ZP_05235318.1| 30S ribosomal protein S6 [Listeria monocytogenes 10403S]
gi|254851790|ref|ZP_05241138.1| ribosomal protein S6 [Listeria monocytogenes FSL R2-503]
gi|254899635|ref|ZP_05259559.1| 30S ribosomal protein S6 [Listeria monocytogenes J0161]
gi|254913162|ref|ZP_05263174.1| ribosomal protein S6 [Listeria monocytogenes J2818]
gi|254930817|ref|ZP_05264176.1| ribosomal protein S6 [Listeria monocytogenes HPB2262]
gi|254937543|ref|ZP_05269240.1| ribosomal protein S6 [Listeria monocytogenes F6900]
gi|254992266|ref|ZP_05274456.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J2-064]
gi|255022437|ref|ZP_05294423.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J1-208]
gi|255028629|ref|ZP_05300580.1| 30S ribosomal protein S6 [Listeria monocytogenes LO28]
gi|255519955|ref|ZP_05387192.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J1-175]
gi|284803215|ref|YP_003415080.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5578]
gi|284996356|ref|YP_003418124.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5923]
gi|290892372|ref|ZP_06555367.1| ribosomal protein S6 [Listeria monocytogenes FSL J2-071]
gi|300765694|ref|ZP_07075671.1| ribosomal protein S6 [Listeria monocytogenes FSL N1-017]
gi|24212308|sp|Q8YAR9|RS6_LISMO RecName: Full=30S ribosomal protein S6
gi|61215608|sp|Q725C0|RS6_LISMF RecName: Full=30S ribosomal protein S6
gi|254765442|sp|B8DAM2|RS6_LISMH RecName: Full=30S ribosomal protein S6
gi|259495338|sp|C1KV85|RS6_LISMC RecName: Full=30S ribosomal protein S6
gi|16409403|emb|CAC98259.1| ribosomal protein S6 [Listeria monocytogenes EGD-e]
gi|46879539|gb|AAT02841.1| ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016457|gb|EAL07378.1| ribosomal protein S6 [Listeria monocytogenes str. 1/2a F6854]
gi|47019371|gb|EAL10112.1| ribosomal protein S6 [Listeria monocytogenes str. 4b H7858]
gi|217335167|gb|ACK40961.1| ribosomal protein S6 [Listeria monocytogenes HCC23]
gi|225875151|emb|CAS03843.1| ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599852|gb|EEW13177.1| ribosomal protein S6 [Listeria monocytogenes FSL N3-165]
gi|258605083|gb|EEW17691.1| ribosomal protein S6 [Listeria monocytogenes FSL R2-503]
gi|258610144|gb|EEW22752.1| ribosomal protein S6 [Listeria monocytogenes F6900]
gi|284058777|gb|ADB69718.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5578]
gi|284061823|gb|ADB72762.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5923]
gi|290558198|gb|EFD91717.1| ribosomal protein S6 [Listeria monocytogenes FSL J2-071]
gi|293582359|gb|EFF94391.1| ribosomal protein S6 [Listeria monocytogenes HPB2262]
gi|293591163|gb|EFF99497.1| ribosomal protein S6 [Listeria monocytogenes J2818]
gi|293593966|gb|EFG01727.1| ribosomal protein S6 [Listeria monocytogenes FSL J1-194]
gi|300513567|gb|EFK40637.1| ribosomal protein S6 [Listeria monocytogenes FSL N1-017]
gi|307569560|emb|CAR82739.1| rpsF [Listeria monocytogenes L99]
gi|313611734|gb|EFR86269.1| ribosomal protein S6 [Listeria monocytogenes FSL F2-208]
gi|328468372|gb|EGF39378.1| 30S ribosomal protein S6 [Listeria monocytogenes 1816]
gi|328476180|gb|EGF46886.1| 30S ribosomal protein S6 [Listeria monocytogenes 220]
gi|332310390|gb|EGJ23485.1| 30S ribosomal protein S6 [Listeria monocytogenes str. Scott A]
Length = 97
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + K + ++ ++ ENG E+ E G R +AY I R +Y +
Sbjct: 5 YEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYHIV 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ + A +I+E R +I ++++R + +
Sbjct: 65 KLNADKADSINEFDRLAKISDDIIRHMVI 93
>gi|227834262|ref|YP_002835969.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
gi|262182995|ref|ZP_06042416.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
gi|254765232|sp|C3PKD0|RS6_CORA7 RecName: Full=30S ribosomal protein S6
gi|227455278|gb|ACP34031.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
Length = 96
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ ++ I+++GG+V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPNQDERTVTPSLDKFLEAIRKDGGKVEKVDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + ++ E+ R++ +++++LR+ L DS
Sbjct: 61 AVVELECESHSVLELDRRLNLNDSILRTKVLRTDS 95
>gi|229007787|ref|ZP_04165373.1| 30S ribosomal protein S6 [Bacillus mycoides Rock1-4]
gi|228753464|gb|EEM02916.1| 30S ribosomal protein S6 [Bacillus mycoides Rock1-4]
Length = 83
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 20 KDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKM 79
K + ++ ++ NG E+ E G R +AY I R +Y+ +N+ S A+ E R
Sbjct: 7 KALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLRDGFYMILNVNSDAEAVKEFDRLA 66
Query: 80 RIDENVLRSLTL 91
+I+E++LR + +
Sbjct: 67 KINEDILRHIVV 78
>gi|302334829|ref|YP_003800036.1| SSU ribosomal protein S6P [Olsenella uli DSM 7084]
gi|301318669|gb|ADK67156.1| SSU ribosomal protein S6P [Olsenella uli DSM 7084]
Length = 97
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + + + + + + ENGG + V + G R +A+ I K + Y
Sbjct: 1 MKAYELLYFVDPACTEEVRAGVMKRIDVAVTENGGTIDNVEDWGKRKLAFEIDKLNEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + PA I E+ R +RI++ V R + +
Sbjct: 61 TLIDFHADPADIAELDRVLRINDAVKRHMVV 91
>gi|300791095|ref|YP_003771386.1| 30S ribosomal protein S6 [Amycolatopsis mediterranei U32]
gi|299800609|gb|ADJ50984.1| small subunit ribosomal protein S6 [Amycolatopsis mediterranei
U32]
Length = 101
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + T+ + ++I+ +GG V V+ G R ++Y I+K+ + Y +++
Sbjct: 1 MVILDPTLDERTVAPTLDTFLNVIRTSGGSVEKVDVWGRRRLSYEIKKHAEGIYALLDLN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRS 88
S A+ E+ R++ + E VLR+
Sbjct: 61 SSSDAVKELDRQLSLQETVLRT 82
>gi|325955200|ref|YP_004238860.1| 30S ribosomal protein S6 [Weeksella virosa DSM 16922]
gi|323437818|gb|ADX68282.1| 30S ribosomal protein S6 [Weeksella virosa DSM 16922]
Length = 114
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + ++ I N E+ G++ +AY I+ R +Y
Sbjct: 1 MTHYETVFILTPVLSDSQVEEAVKKFHDYITANEAEIVATENWGLKKLAYPIQNKRNGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + +++ + DE V+R L++ +D H
Sbjct: 61 HLIEFKTDNTDLVSQLELVFKRDERVIRYLSVKLDKH 97
>gi|319946351|ref|ZP_08020589.1| 30S ribosomal protein S6 [Streptococcus australis ATCC 700641]
gi|319747504|gb|EFV99759.1| 30S ribosomal protein S6 [Streptococcus australis ATCC 700641]
Length = 96
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA++E R +I+ ++LR + + VD+
Sbjct: 61 HIVNVEANDDAALNEFDRLSKINGDILRHMIVKVDA 96
>gi|255084283|ref|XP_002508716.1| predicted protein [Micromonas sp. RCC299]
gi|226523993|gb|ACO69974.1| predicted protein [Micromonas sp. RCC299]
Length = 160
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LYE + +++ Q+ D + + + + + GG + + G R +AY + ++
Sbjct: 1 MVLYELMVMVKSATPRAQLADILRRAGTRVLDAGGVITDITSFGTRPLAYEFKSPGERHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+A+ V ++ S P I +MK MR DE VLR + +
Sbjct: 61 EAHMVQISFNSAPTLIEDMKHDMRTDERVLRWIAV 95
>gi|213966492|ref|ZP_03394663.1| ribosomal protein S6 [Corynebacterium amycolatum SK46]
gi|213950858|gb|EEB62269.1| ribosomal protein S6 [Corynebacterium amycolatum SK46]
Length = 95
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ +Y ++++ G+V V+ G R +AY I K Y
Sbjct: 1 MRHYEVMIIIDPSQDERTVGPSLEKYLDVVRKENGKVEKVDIWGKRHLAYPIEKKEDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +++ A + E+ R++ +++++LR+ L VD
Sbjct: 61 VVVDLTCESATVLELDRRLNLNDSILRTKVLRVD 94
>gi|90994550|ref|YP_537040.1| ribosomal protein S6 [Porphyra yezoensis]
gi|122194661|sp|Q1XDC8|RR6_PORYE RecName: Full=30S ribosomal protein S6, chloroplastic
gi|90819114|dbj|BAE92483.1| 30S ribosomal protein S6 [Porphyra yezoensis]
Length = 109
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+ YE V++L+ D++ + I Y+S++ G + ++ G R ++Y I Y
Sbjct: 9 LNCYETVYILKSDLNEDKTLSIINDYKSMLTNGGAKNIVLQHRGRRHLSYTINDYHDGIY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +N + ++ +R D+N++R LT
Sbjct: 69 VQVNYEGNGQLVKSFEKSLRFDDNIIRYLT 98
>gi|16799116|ref|NP_469384.1| 30S ribosomal protein S6 [Listeria innocua Clip11262]
gi|116871457|ref|YP_848238.1| 30S ribosomal protein S6 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|289433404|ref|YP_003463276.1| 30S ribosomal protein S6 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|315295543|ref|ZP_07872232.1| ribosomal protein S6 [Listeria ivanovii FSL F6-596]
gi|24212317|sp|Q92FR6|RS6_LISIN RecName: Full=30S ribosomal protein S6
gi|123463367|sp|A0AEM1|RS6_LISW6 RecName: Full=30S ribosomal protein S6
gi|16412458|emb|CAC95270.1| ribosomal protein S6 [Listeria innocua Clip11262]
gi|116740335|emb|CAK19453.1| 30S ribosomal protein S6 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|289169648|emb|CBH26184.1| 30S ribosomal protein S6 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313621548|gb|EFR92405.1| ribosomal protein S6 [Listeria innocua FSL S4-378]
gi|313625736|gb|EFR95378.1| ribosomal protein S6 [Listeria innocua FSL J1-023]
gi|313630796|gb|EFR98531.1| ribosomal protein S6 [Listeria ivanovii FSL F6-596]
gi|313635424|gb|EFS01681.1| ribosomal protein S6 [Listeria seeligeri FSL N1-067]
gi|313640068|gb|EFS04704.1| ribosomal protein S6 [Listeria seeligeri FSL S4-171]
Length = 97
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + K + ++ ++ ENG E+ E G R +AY I R +Y +
Sbjct: 5 YEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYHIV 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ + A +I+E R +I ++++R + +
Sbjct: 65 KLNADKADSINEFDRLAKISDDIVRHMVI 93
>gi|254492099|ref|ZP_05105274.1| ribosomal protein S6 [Methylophaga thiooxidans DMS010]
gi|224462651|gb|EEF78925.1| ribosomal protein S6 [Methylophaga thiooxydans DMS010]
Length = 92
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I +Y + GG + + G R +AY I K KA+YV MN+ ++E+ R +
Sbjct: 2 IERYTQTLTSQGGTIHRQEDWGRRQLAYPINKVHKAHYVLMNVECDVEQLNEVTTAFRFN 61
Query: 83 ENVLRSLTLLVDSHEQSPTLTIQR 106
+ V+R L + +D P+ +Q+
Sbjct: 62 DAVIRHLVVNMDEAATEPSPMMQK 85
>gi|6137689|pdb|1QD7|E Chain E, Partial Model For 30s Ribosomal Subunit
gi|7245453|pdb|1EG0|C Chain C, Fitting Of Components With Known Structure Into An 11.5
A Cryo-Em Map Of The E.Coli 70s Ribosome
Length = 97
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|295106371|emb|CBL03914.1| SSU ribosomal protein S6P [Gordonibacter pamelaeae 7-10-1-b]
Length = 97
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + ++ I E G V V+ G R +AY I Y
Sbjct: 1 MKAYELLFFVAPSIDEESRAAVMKRIETTIAEGEGTVDNVDNWGKRKLAYEIDGLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + PA + E+ R +RI++ V+R + +
Sbjct: 61 TLIDFHADPANVAELDRVLRINDAVVRHMIV 91
>gi|255556472|ref|XP_002519270.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541585|gb|EEF43134.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 324
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 28 SLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
++E G + +N+ GMR +AY+I+K KA+Y+ MN I++ K + DE V+R
Sbjct: 165 GFLREKKGRIWRLNDWGMRRLAYKIQKATKAHYILMNFEIEAKWINDFKSMLDKDERVIR 224
Query: 88 SLTL 91
L +
Sbjct: 225 HLVI 228
>gi|11514242|pdb|1G1X|A Chain A, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|11514247|pdb|1G1X|F Chain F, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
Length = 98
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|46200042|ref|YP_005709.1| 30S ribosomal protein S6 [Thermus thermophilus HB27]
gi|55980214|ref|YP_143511.1| 30S ribosomal protein S6 [Thermus thermophilus HB8]
gi|266977|sp|P23370|RS6_THETH RecName: Full=30S ribosomal protein S6; AltName: Full=TS9
gi|50401230|sp|P62666|RS6_THET2 RecName: Full=30S ribosomal protein S6
gi|68713997|sp|Q5SLP8|RS6_THET8 RecName: Full=30S ribosomal protein S6; AltName: Full=TS9
gi|628483|pir||S43389 ribosomal protein S6 - Thermus sp
gi|10120569|pdb|1FKA|F Chain F, Structure Of Functionally Activated Small Ribosomal
Subunit At 3.3 A Resolution
gi|10835590|pdb|1FJG|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096399|pdb|1HR0|F Chain F, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399797|pdb|1HNW|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399819|pdb|1HNX|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399841|pdb|1HNZ|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278015|pdb|1GIX|I Chain I, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278061|pdb|1IBK|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278082|pdb|1IBL|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278106|pdb|1IBM|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|14278535|pdb|1I94|F Chain F, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278556|pdb|1I95|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278577|pdb|1I96|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278599|pdb|1I97|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|15826125|pdb|1JGO|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgo, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826150|pdb|1JGP|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgp, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826175|pdb|1JGQ|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgq, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|20663891|pdb|1J5E|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065881|pdb|1N32|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065908|pdb|1N33|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065935|pdb|1N34|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065961|pdb|1N36|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position
gi|28373704|pdb|1ML5|I Chain I, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|34811534|pdb|1PNS|F Chain F, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811590|pdb|1PNX|F Chain F, Crystal Structure Of The Wild Type Ribosome From E.
Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx,
Contains Only Molecules Of The 30s Ribosomal Subunit.
The 50s Subunit Is In The Pdb File 1pny.
gi|56966328|pdb|1VOQ|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966381|pdb|1VOS|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966434|pdb|1VOV|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966487|pdb|1VOX|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966540|pdb|1VOZ|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|58177405|pdb|1XMO|F Chain F, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177428|pdb|1XMQ|F Chain F, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To
The Decoding Center
gi|58177469|pdb|1XNQ|F Chain F, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177492|pdb|1XNR|F Chain F, Crystal Structure Of An Inosine-Cytosine Wobble Base
Pair In The Context Of The Decoding Center
gi|66361059|pdb|1YL4|I Chain I, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192241|pdb|2B64|F Chain F, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf1 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Subunit, Trnas,
Mrna And Release Factor Rf1 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf1 And Is Described In Remark 400.
gi|88192304|pdb|2B9M|F Chain F, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf2 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Ribosomal Subunit,
Trnas, Mrna And Release Factor Rf2 From A Crystal
Structure Of The Whole Ribosomal Complex". The Entire
Crystal Structure Contains One 70s Ribosome, Trnas,
Mrna And Release Factor Rf2 And Is Described In Remark
400.
gi|88192360|pdb|2B9O|F Chain F, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s
Subunit, Trnas And Mrna From A Crystal Structure Of The
Whole Ribosomal Complex With A Stop Codon In The A-Site
And Is Described In Remark 400.
gi|110591328|pdb|2F4V|F Chain F, 30s Ribosome + Designer Antibiotic
gi|116667659|pdb|2HHH|F Chain F, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668202|pdb|2J00|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of
4). This File Contains The 30s Subunit, Mrna, A-, P-
And E-Site Trnas And Paromomycin For Molecule I.
gi|116668263|pdb|2J02|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389717|pdb|2HGI|I Chain I, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
P Codons. This Entry 2hgi Contains 30s Ribosomal
Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb
Entry 2hgj.
gi|119389774|pdb|2HGP|I Chain I, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome With Translocated And Rotated Shine-Dalgarno
Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
2hgq.
gi|119389830|pdb|2HGR|I Chain I, 70s T.Th. Ribosome Functional Complex With Mrna And E-
And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149241280|pdb|2E5L|F Chain F, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna
Via The Shine- Dalgarno Interaction
gi|149242713|pdb|2OW8|GG Chain g, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243623|pdb|2UU9|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243650|pdb|2UUA|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243677|pdb|2UUB|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243704|pdb|2UUC|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243843|pdb|2UXC|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Ucgu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157833695|pdb|1RIS|A Chain A, Crystal Structure Of The Ribosomal Protein S6 From
Thermus Thermophilus
gi|157836413|pdb|2UXB|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Gggu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836490|pdb|2V46|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836546|pdb|2V48|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430905|pdb|2UXD|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Cggg In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|160285944|pdb|2QNH|GG Chain g, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972854|pdb|2VQE|F Chain F, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972877|pdb|2VQF|F Chain F, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156501|pdb|3D5A|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156557|pdb|3D5C|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938824|pdb|2JL5|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4).
This File Contains The 30s Subunit.
gi|211938882|pdb|2JL7|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4).
This File Contains The 30s Subunit.
gi|218766778|pdb|3F1E|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766834|pdb|3F1G|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|224510688|pdb|3FIC|F Chain F, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
gi|226887379|pdb|2WDG|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887404|pdb|2WDH|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887493|pdb|2WDK|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887550|pdb|2WDM|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|226887634|pdb|2ZM6|F Chain F, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
gi|237823534|pdb|2WH1|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome
gi|237823593|pdb|2WH3|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome). This File
Contains The 30s Subunit.
gi|260099991|pdb|3HUW|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule I.
gi|260100047|pdb|3HUY|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule Ii.
gi|261824489|pdb|2WRI|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of
4).
gi|261824551|pdb|2WRK|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of
4).
gi|261824613|pdb|2WRN|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824672|pdb|2WRQ|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307172|pdb|3KIQ|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307230|pdb|3KIS|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307288|pdb|3KIU|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307346|pdb|3KIX|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|281500591|pdb|2KJV|A Chain A, Solution Structure And Backbone Dynamics Of The
Ribosomal Protein S6wt
gi|288965609|pdb|3KNH|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526687|pdb|3KNJ|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii'
gi|289526712|pdb|3KNL|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526737|pdb|3KNN|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979509|pdb|3I8G|I Chain I, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979534|pdb|3I8H|I Chain I, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979593|pdb|3I9B|I Chain I, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule
B. The 50s Subunit Can Be Found In Pdb Entry 3i9c.
Molecule A In The S Asymmetric Unit Is Deposited As
3i9d (30s) And 3i9e (50s)
gi|294979647|pdb|3I9D|I Chain I, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule
A. The 50s Subunit Can Be Found In Pdb Entry 3i9e.
Molecule B In The S Asymmetric Unit Is Deposited As
3i9b (30s) And 3i9c (50s)
gi|295982080|pdb|2X9R|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982139|pdb|2X9T|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|300508610|pdb|3MR8|F Chain F, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3ms1. Molecule B In The Same Asymmetric Unit Is
Deposited As 3mrz (50s) And 3ms0 (30s).
gi|300508665|pdb|3MS0|F Chain F, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3mrz. Molecule A In The Same Asymmetric Unit Is
Deposited As 3mr8 (30s) And 3ms1 (50s).
gi|307567967|pdb|2XFZ|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568025|pdb|2XG1|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776617|pdb|3OTO|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From A
Ksga Mutant Of Thermus Thermophilus (Hb8)
gi|309320240|pdb|3OGE|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320261|pdb|3OGY|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320342|pdb|3OHC|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320363|pdb|3OHD|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320444|pdb|3OHY|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320495|pdb|3OI0|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320546|pdb|3OI2|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320597|pdb|3OI4|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207678|pdb|2XQD|F Chain F, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
70s Ribosome With A Gtp Analog
gi|313754004|pdb|2XSY|F Chain F, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754119|pdb|2XUY|F Chain F, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|322812555|pdb|3PYN|F Chain F, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s
Ribosome.
gi|322812608|pdb|3PYQ|F Chain F, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812661|pdb|3PYS|F Chain F, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812714|pdb|3PYU|F Chain F, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
gi|325533407|pdb|2Y0U|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533466|pdb|2Y0W|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533525|pdb|2Y0Y|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533584|pdb|2Y10|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533643|pdb|2Y12|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533702|pdb|2Y14|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533761|pdb|2Y16|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533820|pdb|2Y18|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|6739547|gb|AAF27295.1|AF146075_1 ribosomal protein S6 [Thermus thermophilus]
gi|46197670|gb|AAS82082.1| SSU ribosomal protein S6P [Thermus thermophilus HB27]
gi|55771627|dbj|BAD70068.1| 30S ribosomal protein S6 (TS9) [Thermus thermophilus HB8]
Length = 101
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|320449315|ref|YP_004201411.1| 30S ribosomal protein S6 [Thermus scotoductus SA-01]
gi|320149484|gb|ADW20862.1| 30S ribosomal protein S6 [Thermus scotoductus SA-01]
Length = 101
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 1 MKLYEHVFLLRQDISSQQI---KDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M+ YE +L ++ Q+ K+ IG+ ++ G V V E GMR +AY I K+ +
Sbjct: 1 MRKYEVNVILNPNLDQSQLALEKEIIGK---ALEAFGARVEKVEEWGMRRLAYPIAKDTQ 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
Y+++ + P ++ + R++R+ +NV R + + Q P LT
Sbjct: 58 GYFLWYQVEMPEDRVNNLARELRLRDNVRRVMVV----KTQEPLLT 99
>gi|116515285|ref|YP_802914.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285319|sp|Q056X8|RS6_BUCCC RecName: Full=30S ribosomal protein S6
gi|116257139|gb|ABJ90821.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 127
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +++I I +Y LI G + + G R+++Y I+ +KA+Y
Sbjct: 1 MRHYEIILMINPE-KNKKIFIIIEEYNKLIHMYKGIIHRFEDWGKRSLSYTIKNLKKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-VDSHEQ-SPTLTIQRHDRDDRND 114
MNI I E++ + + N++R L +H++ SP L + ++ + N
Sbjct: 60 FLMNIEVSSECIKELENSFKFNINIIRYFILTRTKAHKKISPILKNKEENKKELNS 115
>gi|332295123|ref|YP_004437046.1| 30S ribosomal protein S6 [Thermodesulfobium narugense DSM 14796]
gi|332178226|gb|AEE13915.1| 30S ribosomal protein S6 [Thermodesulfobium narugense DSM 14796]
Length = 126
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE V L + ++I + + LI ++ GE+ + G + +AY I R+A Y+
Sbjct: 5 KLYELVILFNPNAEEEKIDALMKRIHDLISKSSGELLKSDNWGKKRLAYTIDDLREAIYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ P + + E+ R ++I E V+R + + Q L+ ++ D
Sbjct: 65 YDEFRLPTSVVAEVDRILKISEIVIRHMIVKKPDVLQKAALSAEKED 111
>gi|255284242|ref|ZP_05348797.1| ribosomal protein S6 [Bryantella formatexigens DSM 14469]
gi|255265195|gb|EET58400.1| ribosomal protein S6 [Bryantella formatexigens DSM 14469]
Length = 95
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I G + V+E G + +AY I+K + YY
Sbjct: 1 MNKYELAVVVNAKIEDDARTATVEKVKEYITRYNGTITNVDEWGKKKLAYEIQKMSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI ENVLR L + D+
Sbjct: 61 YFIQFEADAECPIELERHVRIMENVLRYLCVRQDA 95
>gi|169830185|ref|YP_001700343.1| 30S ribosomal protein S6 [Lysinibacillus sphaericus C3-41]
gi|168994673|gb|ACA42213.1| 30S ribosomal protein S6 [Lysinibacillus sphaericus C3-41]
Length = 89
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R +I + K + ++ ++ NG EV E G R +AY I+ R+ YY + +
Sbjct: 1 MYIVRPNIEDEAKKALVERFNEVLTSNGAEVIESKEWGKRRLAYEIQDFREGYYQIVKVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
+ AI+E R I E+++R + +
Sbjct: 61 ATSDAINEYTRLANISEDIIRHIAV 85
>gi|194333004|ref|YP_002014864.1| 30S ribosomal protein S6 [Prosthecochloris aestuarii DSM 271]
gi|194310822|gb|ACF45217.1| ribosomal protein S6 [Prosthecochloris aestuarii DSM 271]
Length = 135
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I+ + + +++I G ++ V E+G R +AY I K Y
Sbjct: 9 KLYECTVIINGGLEDDAIESAMAEVRNVITSTGSDIDNVLEVGRRKMAYPISKQTIGSYA 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + I +++ R DEN+LR L + + S
Sbjct: 69 HIEFNAEASVIAGIEKAFRYDENILRFLIIQLSS 102
>gi|269837480|ref|YP_003319708.1| 30S ribosomal protein S6 [Sphaerobacter thermophilus DSM 20745]
gi|269786743|gb|ACZ38886.1| ribosomal protein S6 [Sphaerobacter thermophilus DSM 20745]
Length = 109
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLV---NELGMRTIAYRIRKNRKAYYVFMN 64
L+ +++ + + + +LI ++GGEV V G R +AY I K R A YV +
Sbjct: 1 MLISPEVTDEALTAEVDGISALIAQHGGEVTHVKRDTPWGRRRLAYPINKFRDATYVLYH 60
Query: 65 IASPPAAIHEMKRKMRIDENVLRSLTL 91
P+ I E++R ++++E V+R L +
Sbjct: 61 FNCAPSRIIEIERDLKLNERVIRYLLI 87
>gi|258645633|ref|ZP_05733102.1| ribosomal protein S6 [Dialister invisus DSM 15470]
gi|260402994|gb|EEW96541.1| ribosomal protein S6 [Dialister invisus DSM 15470]
Length = 94
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 1 MKLYEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
MK YE +F++ DI++++ I+ + Q I GG V V+E G R +AY ++ + Y
Sbjct: 1 MKKYEVMFIV--DIANEEVIQAAVKLVQDTIVRIGGTVTKVDEWGKRHLAYEVKHQNEGY 58
Query: 60 YVFMNIASPPAAIHEMKRKMR 80
YV ++ + P+ I E+ R ++
Sbjct: 59 YVVIDFEADPSQIAELDRIIK 79
>gi|29374668|ref|NP_813820.1| 30S ribosomal protein S6 [Enterococcus faecalis V583]
gi|227518102|ref|ZP_03948151.1| 30S ribosomal protein S6 [Enterococcus faecalis TX0104]
gi|227555691|ref|ZP_03985738.1| 30S ribosomal protein S6 [Enterococcus faecalis HH22]
gi|229547123|ref|ZP_04435848.1| 30S ribosomal protein S6 [Enterococcus faecalis TX1322]
gi|229550693|ref|ZP_04439418.1| 30S ribosomal protein S6 [Enterococcus faecalis ATCC 29200]
gi|255971555|ref|ZP_05422141.1| ribosomal protein S6 [Enterococcus faecalis T1]
gi|255974528|ref|ZP_05425114.1| ribosomal protein S6 [Enterococcus faecalis T2]
gi|256618521|ref|ZP_05475367.1| ribosomal protein S6 [Enterococcus faecalis ATCC 4200]
gi|256761860|ref|ZP_05502440.1| ribosomal protein S6 [Enterococcus faecalis T3]
gi|256854987|ref|ZP_05560348.1| ribosomal protein S6 [Enterococcus faecalis T8]
gi|256957009|ref|ZP_05561180.1| ribosomal protein S6 [Enterococcus faecalis DS5]
gi|256960818|ref|ZP_05564989.1| 30S ribosomal protein S6 [Enterococcus faecalis Merz96]
gi|256963989|ref|ZP_05568160.1| 30S ribosomal protein S6 [Enterococcus faecalis HIP11704]
gi|257078686|ref|ZP_05573047.1| 30S ribosomal protein S6 [Enterococcus faecalis JH1]
gi|257081353|ref|ZP_05575714.1| ribosomal protein S6 [Enterococcus faecalis E1Sol]
gi|257084010|ref|ZP_05578371.1| 30S ribosomal protein S6 [Enterococcus faecalis Fly1]
gi|257087840|ref|ZP_05582201.1| ribosomal protein S6 [Enterococcus faecalis D6]
gi|257088492|ref|ZP_05582853.1| 30S ribosomal protein S6 [Enterococcus faecalis CH188]
gi|257417432|ref|ZP_05594426.1| ribosomal protein S6 [Enterococcus faecalis AR01/DG]
gi|257418836|ref|ZP_05595830.1| 30S ribosomal protein S6 [Enterococcus faecalis T11]
gi|257421349|ref|ZP_05598339.1| 30S ribosomal protein S6 [Enterococcus faecalis X98]
gi|293382656|ref|ZP_06628584.1| ribosomal protein S6 [Enterococcus faecalis R712]
gi|293387932|ref|ZP_06632468.1| ribosomal protein S6 [Enterococcus faecalis S613]
gi|294780770|ref|ZP_06746128.1| ribosomal protein S6 [Enterococcus faecalis PC1.1]
gi|300861937|ref|ZP_07108017.1| ribosomal protein S6 [Enterococcus faecalis TUSoD Ef11]
gi|307268923|ref|ZP_07550287.1| ribosomal protein S6 [Enterococcus faecalis TX4248]
gi|307274018|ref|ZP_07555228.1| ribosomal protein S6 [Enterococcus faecalis TX0855]
gi|307276493|ref|ZP_07557613.1| ribosomal protein S6 [Enterococcus faecalis TX2134]
gi|307284065|ref|ZP_07564235.1| ribosomal protein S6 [Enterococcus faecalis TX0860]
gi|307287175|ref|ZP_07567246.1| ribosomal protein S6 [Enterococcus faecalis TX0109]
gi|307296596|ref|ZP_07576416.1| ribosomal protein S6 [Enterococcus faecalis TX0411]
gi|312901290|ref|ZP_07760573.1| ribosomal protein S6 [Enterococcus faecalis TX0470]
gi|312903113|ref|ZP_07762294.1| ribosomal protein S6 [Enterococcus faecalis TX0635]
gi|312908808|ref|ZP_07767747.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 512]
gi|312951714|ref|ZP_07770608.1| ribosomal protein S6 [Enterococcus faecalis TX0102]
gi|312979550|ref|ZP_07791232.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 516]
gi|61215751|sp|Q839Z0|RS6_ENTFA RecName: Full=30S ribosomal protein S6
gi|29342126|gb|AAO79892.1| ribosomal protein S6 [Enterococcus faecalis V583]
gi|227074450|gb|EEI12413.1| 30S ribosomal protein S6 [Enterococcus faecalis TX0104]
gi|227175149|gb|EEI56121.1| 30S ribosomal protein S6 [Enterococcus faecalis HH22]
gi|229304194|gb|EEN70190.1| 30S ribosomal protein S6 [Enterococcus faecalis ATCC 29200]
gi|229307779|gb|EEN73766.1| 30S ribosomal protein S6 [Enterococcus faecalis TX1322]
gi|255962573|gb|EET95049.1| ribosomal protein S6 [Enterococcus faecalis T1]
gi|255967400|gb|EET98022.1| ribosomal protein S6 [Enterococcus faecalis T2]
gi|256598048|gb|EEU17224.1| ribosomal protein S6 [Enterococcus faecalis ATCC 4200]
gi|256683111|gb|EEU22806.1| ribosomal protein S6 [Enterococcus faecalis T3]
gi|256709500|gb|EEU24547.1| ribosomal protein S6 [Enterococcus faecalis T8]
gi|256947505|gb|EEU64137.1| ribosomal protein S6 [Enterococcus faecalis DS5]
gi|256951314|gb|EEU67946.1| 30S ribosomal protein S6 [Enterococcus faecalis Merz96]
gi|256954485|gb|EEU71117.1| 30S ribosomal protein S6 [Enterococcus faecalis HIP11704]
gi|256986716|gb|EEU74018.1| 30S ribosomal protein S6 [Enterococcus faecalis JH1]
gi|256989383|gb|EEU76685.1| ribosomal protein S6 [Enterococcus faecalis E1Sol]
gi|256992040|gb|EEU79342.1| 30S ribosomal protein S6 [Enterococcus faecalis Fly1]
gi|256995870|gb|EEU83172.1| ribosomal protein S6 [Enterococcus faecalis D6]
gi|256997304|gb|EEU83824.1| 30S ribosomal protein S6 [Enterococcus faecalis CH188]
gi|257159260|gb|EEU89220.1| ribosomal protein S6 [Enterococcus faecalis ARO1/DG]
gi|257160664|gb|EEU90624.1| 30S ribosomal protein S6 [Enterococcus faecalis T11]
gi|257163173|gb|EEU93133.1| 30S ribosomal protein S6 [Enterococcus faecalis X98]
gi|291079962|gb|EFE17326.1| ribosomal protein S6 [Enterococcus faecalis R712]
gi|291082669|gb|EFE19632.1| ribosomal protein S6 [Enterococcus faecalis S613]
gi|294452132|gb|EFG20576.1| ribosomal protein S6 [Enterococcus faecalis PC1.1]
gi|295112346|emb|CBL30983.1| SSU ribosomal protein S6P [Enterococcus sp. 7L76]
gi|300848462|gb|EFK76219.1| ribosomal protein S6 [Enterococcus faecalis TUSoD Ef11]
gi|306495932|gb|EFM65520.1| ribosomal protein S6 [Enterococcus faecalis TX0411]
gi|306501773|gb|EFM71064.1| ribosomal protein S6 [Enterococcus faecalis TX0109]
gi|306503436|gb|EFM72685.1| ribosomal protein S6 [Enterococcus faecalis TX0860]
gi|306506820|gb|EFM75970.1| ribosomal protein S6 [Enterococcus faecalis TX2134]
gi|306509326|gb|EFM78386.1| ribosomal protein S6 [Enterococcus faecalis TX0855]
gi|306514731|gb|EFM83282.1| ribosomal protein S6 [Enterococcus faecalis TX4248]
gi|310625246|gb|EFQ08529.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 512]
gi|310630287|gb|EFQ13570.1| ribosomal protein S6 [Enterococcus faecalis TX0102]
gi|310633504|gb|EFQ16787.1| ribosomal protein S6 [Enterococcus faecalis TX0635]
gi|311287732|gb|EFQ66288.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 516]
gi|311291667|gb|EFQ70223.1| ribosomal protein S6 [Enterococcus faecalis TX0470]
gi|315026671|gb|EFT38603.1| ribosomal protein S6 [Enterococcus faecalis TX2137]
gi|315030116|gb|EFT42048.1| ribosomal protein S6 [Enterococcus faecalis TX4000]
gi|315033550|gb|EFT45482.1| ribosomal protein S6 [Enterococcus faecalis TX0017]
gi|315036373|gb|EFT48305.1| ribosomal protein S6 [Enterococcus faecalis TX0027]
gi|315143589|gb|EFT87605.1| ribosomal protein S6 [Enterococcus faecalis TX2141]
gi|315148273|gb|EFT92289.1| ribosomal protein S6 [Enterococcus faecalis TX4244]
gi|315151297|gb|EFT95313.1| ribosomal protein S6 [Enterococcus faecalis TX0012]
gi|315153723|gb|EFT97739.1| ribosomal protein S6 [Enterococcus faecalis TX0031]
gi|315155117|gb|EFT99133.1| ribosomal protein S6 [Enterococcus faecalis TX0043]
gi|315158753|gb|EFU02770.1| ribosomal protein S6 [Enterococcus faecalis TX0312]
gi|315163337|gb|EFU07354.1| ribosomal protein S6 [Enterococcus faecalis TX0645]
gi|315165721|gb|EFU09738.1| ribosomal protein S6 [Enterococcus faecalis TX1302]
gi|315168226|gb|EFU12243.1| ribosomal protein S6 [Enterococcus faecalis TX1341]
gi|315170506|gb|EFU14523.1| ribosomal protein S6 [Enterococcus faecalis TX1342]
gi|315174176|gb|EFU18193.1| ribosomal protein S6 [Enterococcus faecalis TX1346]
gi|315573985|gb|EFU86176.1| ribosomal protein S6 [Enterococcus faecalis TX0309B]
gi|315578845|gb|EFU91036.1| ribosomal protein S6 [Enterococcus faecalis TX0630]
gi|315581936|gb|EFU94127.1| ribosomal protein S6 [Enterococcus faecalis TX0309A]
gi|323479246|gb|ADX78685.1| ribosomal protein S6 [Enterococcus faecalis 62]
gi|327533860|gb|AEA92694.1| 30S ribosomal protein S6 [Enterococcus faecalis OG1RF]
Length = 100
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + + ++ +++++NG EV + R +AY + R+ Y +
Sbjct: 7 YEIMYIIRPNIDEEAKTALVERFDTILKDNGAEVIESKDWEKRRLAYEMNGFREGIYHIV 66
Query: 64 NIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ SP AI+E R +I+++++R + + V++
Sbjct: 67 NVTSPSTAGAINEFDRLAKINDDIIRHMIVKVEA 100
>gi|184201985|ref|YP_001856192.1| 30S ribosomal protein S6 [Kocuria rhizophila DC2201]
gi|226703478|sp|B2GJD8|RS6_KOCRD RecName: Full=30S ribosomal protein S6
gi|183582215|dbj|BAG30686.1| 30S ribosomal protein S6 [Kocuria rhizophila DC2201]
Length = 101
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 48/88 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ T+ ++ ++ + G V ++ G R +AY I+K + Y
Sbjct: 1 MREYELMVILNPEVEERAVEPTLKKFLEVVTKENGTVDKLDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
+N + P E+ R + ++E V+R+
Sbjct: 61 AVVNFTAEPQTAKELDRVLSLNEAVMRT 88
>gi|229824645|ref|ZP_04450714.1| hypothetical protein GCWU000282_01992 [Catonella morbi ATCC
51271]
gi|229786016|gb|EEP22130.1| hypothetical protein GCWU000282_01992 [Catonella morbi ATCC
51271]
Length = 99
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D++ K+ + ++ S++ ENG EV + + AY I ++ Y +
Sbjct: 7 YEILYIIRPDLTDDAKKELVERFDSILTENGTEVVESKDWAKKRFAYEINDYKEGIYHIV 66
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
N+ + A I+E R +I+ ++LR + + V++
Sbjct: 67 NVVAENAQGINEFDRLAKINRDILRHMIVKVEA 99
>gi|218135344|ref|ZP_03464148.1| hypothetical protein BACPEC_03249 [Bacteroides pectinophilus ATCC
43243]
gi|217990729|gb|EEC56740.1| hypothetical protein BACPEC_03249 [Bacteroides pectinophilus ATCC
43243]
Length = 95
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ ++ + +T+ Q + L+ GG + V + G + +AY I+ + +Y
Sbjct: 1 MNKYELTVVVSANVEDEVRVNTVEQVKELVARFGGVISNVEDCGKKRLAYEIQHMKDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + AA E++ ++RI +NV+R L +
Sbjct: 61 YFIKFDADAAAPAEIESRIRIMDNVIRFLIV 91
>gi|50085515|ref|YP_047025.1| 30S ribosomal protein S6 [Acinetobacter sp. ADP1]
gi|61215532|sp|Q6F9R0|RS6_ACIAD RecName: Full=30S ribosomal protein S6
gi|49531491|emb|CAG69203.1| 30S ribosomal protein S6 [Acinetobacter sp. ADP1]
Length = 128
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRID-----------ENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ MN+ + E++ R + E+ + +LL S E+ QR +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREE 118
>gi|297242914|ref|ZP_06926852.1| ribosomal protein S6 [Gardnerella vaginalis AMD]
gi|298253288|ref|ZP_06977080.1| ribosomal protein S6 [Gardnerella vaginalis 5-1]
gi|296889125|gb|EFH27859.1| ribosomal protein S6 [Gardnerella vaginalis AMD]
gi|297532683|gb|EFH71569.1| ribosomal protein S6 [Gardnerella vaginalis 5-1]
Length = 90
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+F+ ++ +K QY L+ GG V + G R AY I + YV +N
Sbjct: 1 MFIANPELDEHGLKKLTEQYLELVTNEGGSVDGTDYWGRRKFAYEIEGKTEGNYVVVNYT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P+ E+ R + ++E+V+R+ L D+
Sbjct: 61 AEPSVSDELDRVLNLNESVIRTKILRKDA 89
>gi|32476151|ref|NP_869145.1| ribosomal protein S6 [Rhodopirellula baltica SH 1]
gi|61216280|sp|Q7UKV1|RS6_RHOBA RecName: Full=30S ribosomal protein S6
gi|32446695|emb|CAD76531.1| probable ribosomal protein S6 [Rhodopirellula baltica SH 1]
gi|327542672|gb|EGF29143.1| Ribosomal protein S6 [Rhodopirellula baltica WH47]
Length = 140
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+L + ++ Q + LI ENGGEV++ + +AY I K++K Y +
Sbjct: 7 YETLFILDSNHYARDPGGVAKQLEELIAENGGEVQVSRMWMEQKLAYPIDKHQKGTYYLI 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ + ++ R + E V+R LT+ +D P L R +
Sbjct: 67 YFSMEGPNLTQLARAFALAEPVIRELTIKLDPRLVEPILANARGE 111
>gi|291545081|emb|CBL18190.1| SSU ribosomal protein S6P [Ruminococcus sp. 18P13]
Length = 97
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + +K+ I ++++ I+EN + G R +AY I YYV
Sbjct: 8 YEAMVVFSLAKGEDAVKELIEKFKAQIEENATLESVDESWGKRKLAYPINDELDGYYVIY 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLL 92
S PA E RK+ I + VLRSL +
Sbjct: 68 TFESTPAYPAEFTRKVNITDGVLRSLVTV 96
>gi|227824503|ref|ZP_03989335.1| 30S ribosomal protein S6P [Acidaminococcus sp. D21]
gi|226905002|gb|EEH90920.1| 30S ribosomal protein S6P [Acidaminococcus sp. D21]
Length = 94
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + + ++ L+ NG + ++ G + +AY I+ + Y
Sbjct: 1 MNNYEVMYIVKP-VEEEAYSAVVKKFDDLLTANGATIEKTDKWGKKHLAYPIQDIQDGLY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V ++ PAA+ E+ R M+I + +LR + +
Sbjct: 60 VLTTFSAEPAAVKELDRVMKITDEILRHMII 90
>gi|262372196|ref|ZP_06065475.1| ribosomal protein S6 [Acinetobacter junii SH205]
gi|262312221|gb|EEY93306.1| ribosomal protein S6 [Acinetobacter junii SH205]
Length = 127
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRID-----------ENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ MN+ + E++ R + E+ + +LL S E+ QR +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREE 118
>gi|261338589|ref|ZP_05966473.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
gi|270276623|gb|EFA22477.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
Length = 95
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ + +K QY ++ + GG V ++ G R +AY I + YV +
Sbjct: 6 YELMFIADPQLDENGLKKLTNQYMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA E+ R + ++E+V+R+ L
Sbjct: 66 LYTAEPAVSDELDRLLNLNESVVRTKIL 93
>gi|183602721|ref|ZP_02964084.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683178|ref|YP_002469561.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191513|ref|YP_002968907.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196918|ref|YP_002970473.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183217959|gb|EDT88607.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620828|gb|ACL28985.1| ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249905|gb|ACS46845.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251472|gb|ACS48411.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|295794505|gb|ADG34040.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
V9]
Length = 95
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ +K Q+ ++ + GG V ++ G R +AY I + YV +
Sbjct: 6 YELMFIADPELDENGLKKLTNQHMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA E+ R + ++E+++R+ L
Sbjct: 66 TYSCEPATNDELDRVLNLNESIVRTKIL 93
>gi|313672480|ref|YP_004050591.1| ribosomal protein s6 [Calditerrivibrio nitroreducens DSM 19672]
gi|312939236|gb|ADR18428.1| ribosomal protein S6 [Calditerrivibrio nitroreducens DSM 19672]
Length = 144
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ + +++ LI NGGE+ G +AY I K+++ Y
Sbjct: 1 MNTYETVFIVSPALPLDDANAIFEKFKDLISTNGGEILNSEYWGKLKMAYPINKHKEGCY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + E++ + + DENVLR + + +D
Sbjct: 61 YLIQYKADGKFNSELETRFKYDENVLRFVVVKLDG 95
>gi|148274147|ref|YP_001223708.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|170783387|ref|YP_001711721.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
sepedonicus]
gi|147832077|emb|CAN03050.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|169157957|emb|CAQ03167.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 154
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +I + + ++ ++ ++I+ +GG V V+ G R +AY I K + Y +
Sbjct: 5 YELMVILDPEIDERTVAPSLDKFLNVIRTSGGTVDNVDVWGRRRLAYEINKKNEGIYAVV 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + A E+ R++ + E V+R+ L
Sbjct: 65 QLTATSEATQELDRQLGLSEAVMRTKVL 92
>gi|313906074|ref|ZP_07839426.1| ribosomal protein S6 [Eubacterium cellulosolvens 6]
gi|313469119|gb|EFR64469.1| ribosomal protein S6 [Eubacterium cellulosolvens 6]
Length = 96
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + + + + + I G + V++ G + +AY I R+ +Y
Sbjct: 1 MHNYELALVLSAKLDDESRAAKLEKAKGYITRYNGTIGNVDDWGKKKLAYEIEHEREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + P A E++R +RI ++VLR L + D+
Sbjct: 61 YFIPFEADPTAPAEIERHVRIMDDVLRYLIIRTDA 95
>gi|226952677|ref|ZP_03823141.1| 30S ribosomal protein S6 [Acinetobacter sp. ATCC 27244]
gi|294649991|ref|ZP_06727379.1| 30S ribosomal protein S6 [Acinetobacter haemolyticus ATCC 19194]
gi|226836583|gb|EEH68966.1| 30S ribosomal protein S6 [Acinetobacter sp. ATCC 27244]
gi|292824084|gb|EFF82899.1| 30S ribosomal protein S6 [Acinetobacter haemolyticus ATCC 19194]
Length = 127
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRID-----------ENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ MN+ + E++ R + E+ + +LL S E+ QR +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESLLAKSAEEKRARKAQREE 118
>gi|307704414|ref|ZP_07641326.1| ribosomal protein S6 [Streptococcus mitis SK597]
gi|307622027|gb|EFO01052.1| ribosomal protein S6 [Streptococcus mitis SK597]
Length = 96
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|324992068|gb|EGC23990.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK405]
gi|324994161|gb|EGC26075.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK678]
gi|325688010|gb|EGD30029.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK72]
Length = 96
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+NI A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNIEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|332685542|ref|YP_004455316.1| 30S ribosomal protein S6p [Melissococcus plutonius ATCC 35311]
gi|332369551|dbj|BAK20507.1| SSU ribosomal protein S6p [Melissococcus plutonius ATCC 35311]
Length = 102
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + I ++ S++++NG + + R +AY ++ + Y +
Sbjct: 9 YEVMYIIRPNIDEEAKAALIERFDSILKDNGATISESKDWEKRRLAYEMKGYHEGIYHIV 68
Query: 64 NIASPPA--AIHEMKRKMRIDENVLRSLTLLVDS 95
N+ASP + AI+E R +I+++++R + + +++
Sbjct: 69 NVASPSSANAINEFDRLAKINDDIIRHMIIKLEA 102
>gi|317133424|ref|YP_004092738.1| ribosomal protein S6 [Ethanoligenens harbinense YUAN-3]
gi|315471403|gb|ADU28007.1| ribosomal protein S6 [Ethanoligenens harbinense YUAN-3]
Length = 95
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V + + ++ + + ++++L+ ENG + V+E G R +AY I + YV
Sbjct: 7 YESVIIFKPNLGEEATSALLEKFKTLVSENG-TLETVDEWGRRRLAYPIEDENEGIYVQF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+S E+ R++++ + VLRSL
Sbjct: 66 LFSSDNTFPAELDRQLKLSDGVLRSL 91
>gi|289177638|gb|ADC84884.1| SSU ribosomal protein S6P [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 96
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ +K Q+ ++ + GG V ++ G R +AY I + YV +
Sbjct: 7 YELMFIADPELDENGLKKLTNQHMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA E+ R + ++E+++R+ L
Sbjct: 67 TYSCEPATNDELDRVLNLNESIVRTKIL 94
>gi|283798278|ref|ZP_06347431.1| ribosomal protein S6 [Clostridium sp. M62/1]
gi|291074057|gb|EFE11421.1| ribosomal protein S6 [Clostridium sp. M62/1]
gi|295090605|emb|CBK76712.1| SSU ribosomal protein S6P [Clostridium cf. saccharolyticum K10]
gi|295115693|emb|CBL36540.1| SSU ribosomal protein S6P [butyrate-producing bacterium SM4/1]
Length = 95
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + + I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSMKLEDEERAAAIEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIQFESDSVCPNEVEAHVRIMEPVIRYLCVRQDA 95
>gi|218296079|ref|ZP_03496848.1| ribosomal protein S6 [Thermus aquaticus Y51MC23]
gi|218243456|gb|EED09985.1| ribosomal protein S6 [Thermus aquaticus Y51MC23]
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 1 MKLYEHVFLLRQDISSQQI---KDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M+ YE +L ++ Q+ K+ IG+ ++ +G V V E G+R +AY I K+ +
Sbjct: 1 MRKYEVNVILNPNLDQTQLALEKEIIGK---ALEAHGARVEKVEEWGVRRLAYPIAKDPQ 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y++F + P ++ + R++RI +NV R + +
Sbjct: 58 GYFLFYQVEMPEDRVNALARELRIRDNVRRVMVV 91
>gi|327399729|ref|YP_004340598.1| 30S ribosomal protein S6 [Hippea maritima DSM 10411]
gi|327182358|gb|AEA34539.1| 30S ribosomal protein S6 [Hippea maritima DSM 10411]
Length = 112
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM-RTIAYRIRKNRKAY 59
M+ YE ++++R + ++K I I+ GGE+ L NE+ R++AY I+K ++ Y
Sbjct: 1 MRYYELLYIVRPTMGEDELKAFIEGVAERIKAEGGEI-LKNEVWQKRSLAYPIKKFKQGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
Y+ ++ S ++ +R+ E+VLR +T
Sbjct: 60 YILVHYKSEADTPKRIEEFLRLKEDVLRFIT 90
>gi|110644557|ref|YP_672287.1| 30S ribosomal subunit protein S6 [Escherichia coli 536]
gi|110346149|gb|ABG72386.1| 30S ribosomal subunit protein S6 [Escherichia coli 536]
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 43 LGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSP 100
G R +AY I K KA+YV MN+ +P I E++ R ++ V+RS+ + E SP
Sbjct: 12 WGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP 71
Query: 101 TLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ + +R +R D F + D + SEE
Sbjct: 72 -MVKAKDERRERRDDFANETADDAEAGDSEE 101
>gi|291542455|emb|CBL15565.1| SSU ribosomal protein S6P [Ruminococcus bromii L2-63]
Length = 98
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V ++ + I+ + ++++LI+++ ++ V+E G R +AY I K + YYV
Sbjct: 7 YETVMIISMKKGEEGIQAIVEKFKALIEKHA-TLKNVDEWGKRKLAYLINKESEGYYVLF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ S E+ R +I E V+RS+ +
Sbjct: 66 DFESEAEFPAELDRIYKITEGVMRSMII 93
>gi|197294289|ref|YP_001798830.1| 30S ribosomal protein S6 [Candidatus Phytoplasma australiense]
gi|226695111|sp|B1V955|RS6_PHYAS RecName: Full=30S ribosomal protein S6
gi|171853616|emb|CAM11487.1| 30S ribosomal protein S6 [Candidatus Phytoplasma australiense]
Length = 93
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ + ++K +S+ + + E+G++ +AY I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDNNEVKKINDHLESVFSKKPSTILEKKEIGLKDLAYPINNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + A+ E R ++I E V+R + +
Sbjct: 61 YWFITQTDNEAVLEFNRIVKITEEVIRFIII 91
>gi|260437870|ref|ZP_05791686.1| ribosomal protein S6 [Butyrivibrio crossotus DSM 2876]
gi|292809896|gb|EFF69101.1| ribosomal protein S6 [Butyrivibrio crossotus DSM 2876]
Length = 95
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I + + L+ + GG + V+E G + +AY I+K +A+Y F +I + + + ++RI
Sbjct: 22 VIEKVKDLVAKCGGTITAVDEAGKKKLAYEIQKMNEAFYYFFSIDAVAEFPNAIASELRI 81
Query: 82 DENVLRSLTLLVD 94
+NVLR L + V+
Sbjct: 82 MDNVLRFLCVNVE 94
>gi|94502359|ref|ZP_01308825.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833771|ref|YP_001597967.1| 30S ribosomal subunit protein S6 [Candidatus Sulcia muelleri
GWSS]
gi|94451084|gb|EAT14043.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206261|gb|ABS30571.1| 30S ribosomal subunit protein S6 [Candidatus Sulcia muelleri
GWSS]
Length = 108
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V ++ +SS++IK T +Y + + N + G++ +AY I+K + +Y
Sbjct: 3 YETVLIITPVLSSEKIKLTTLEYINYLIINKANLMFEEHWGVKKLAYPIKKKKYGFYHIF 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
++ P I+ + K+ DE ++R LT+ + + S
Sbjct: 63 YYSANPKLIYNLDFKLNRDEKIIRFLTVKIGNEAFS 98
>gi|293977884|ref|YP_003543314.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri DMIN]
gi|292667815|gb|ADE35450.1| ribosomal protein S6 [Candidatus Sulcia muelleri DMIN]
Length = 108
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V ++ +SS++IK T +Y + + N + G++ +AY I+K + +Y
Sbjct: 3 YETVLIITPVLSSEKIKLTTLEYINYLIINKANLMFEEHWGVKKLAYPIKKKKYGFYHIF 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
++ P I+ + K+ DE ++R LT+ + + S
Sbjct: 63 YYSANPKLIYNLDLKLNRDEKIIRFLTVKIGNEAFS 98
>gi|260495034|ref|ZP_05815163.1| ribosomal protein S6 [Fusobacterium sp. 3_1_33]
gi|260197477|gb|EEW94995.1| ribosomal protein S6 [Fusobacterium sp. 3_1_33]
Length = 105
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREETISQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 72 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVV 102
>gi|6730019|pdb|1LOU|A Chain A, Ribosomal Protein S6
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q + G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRAAENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|33241323|ref|NP_876265.1| ribosomal protein S6 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|61216288|sp|Q7V9F9|RS6_PROMA RecName: Full=30S ribosomal protein S6
gi|33238853|gb|AAQ00918.1| Ribosomal protein S6 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 210
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAYYVF 62
YE +++LR DI +++ + +Y ++++ ++ + N++ G R +AY I K+++ YV
Sbjct: 7 YETMYILRPDIPEDEVEGHLKKYSEVLEKAKAKI-IDNQMRGKRRLAYTIGKHKEGIYVQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + ++R MR+ E+V+R LT+
Sbjct: 66 LSHTGNGKHVETLERSMRLSEDVIRYLTV 94
>gi|50364895|ref|YP_053320.1| 30S ribosomal protein S6 [Mesoplasma florum L1]
gi|81391993|sp|Q6F237|RS6_MESFL RecName: Full=30S ribosomal protein S6
gi|50363451|gb|AAT75436.1| 30S ribosomal protein S6 [Mesoplasma florum L1]
Length = 290
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE +F+L QD +Q + + +I ++G + N+LG+ AY+I +K +Y
Sbjct: 2 LRKYEAMFILDQD--TQDVNALSSRMIEIISKDGKVIEK-NDLGLIEFAYKINHKKKGHY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS---HEQSPTLT 103
+ + + AI E +R I++NV+R+L + ++ +EQS L+
Sbjct: 59 FVVIVEATAEAIKEFERIANIEKNVVRTLIINTENEQGYEQSVQLS 104
>gi|82408146|pdb|2BVZ|A Chain A, Mutant Of The Ribosomal Protein S6
Length = 101
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P +++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDAARELRIRDNVRR--VMVVKSQE 95
>gi|262283525|ref|ZP_06061291.1| 30S ribosomal protein S6 [Streptococcus sp. 2_1_36FAA]
gi|262261016|gb|EEY79716.1| 30S ribosomal protein S6 [Streptococcus sp. 2_1_36FAA]
Length = 107
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 12 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 71
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 72 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 107
>gi|15675658|ref|NP_269832.1| 30S ribosomal protein S6 [Streptococcus pyogenes M1 GAS]
gi|19746764|ref|NP_607900.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS8232]
gi|21911118|ref|NP_665386.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS315]
gi|28895197|ref|NP_801547.1| 30S ribosomal protein S6 [Streptococcus pyogenes SSI-1]
gi|50914913|ref|YP_060885.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS10394]
gi|71904204|ref|YP_281007.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS6180]
gi|71911368|ref|YP_282918.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS5005]
gi|94989190|ref|YP_597291.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS9429]
gi|94991131|ref|YP_599231.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS10270]
gi|94993077|ref|YP_601176.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS2096]
gi|139473171|ref|YP_001127886.1| 30S ribosomal protein S6 [Streptococcus pyogenes str. Manfredo]
gi|209559925|ref|YP_002286397.1| 30S ribosomal protein S6 [Streptococcus pyogenes NZ131]
gi|251783275|ref|YP_002997580.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306826728|ref|ZP_07460030.1| 30S ribosomal protein S6 [Streptococcus pyogenes ATCC 10782]
gi|54039535|sp|P66600|RS6_STRP3 RecName: Full=30S ribosomal protein S6
gi|54039536|sp|P66601|RS6_STRP8 RecName: Full=30S ribosomal protein S6
gi|54041978|sp|P66599|RS6_STRP1 RecName: Full=30S ribosomal protein S6
gi|61216147|sp|Q5XA61|RS6_STRP6 RecName: Full=30S ribosomal protein S6
gi|91207794|sp|Q48RK8|RS6_STRPM RecName: Full=30S ribosomal protein S6
gi|166227389|sp|Q1JA29|RS6_STRPB RecName: Full=30S ribosomal protein S6
gi|166227390|sp|Q1JK76|RS6_STRPC RecName: Full=30S ribosomal protein S6
gi|166227391|sp|Q1JF72|RS6_STRPD RecName: Full=30S ribosomal protein S6
gi|166227392|sp|A2RCR4|RS6_STRPG RecName: Full=30S ribosomal protein S6
gi|226695292|sp|B5XI40|RS6_STRPZ RecName: Full=30S ribosomal protein S6
gi|13622870|gb|AAK34553.1| 30S ribosomal protein S6 [Streptococcus pyogenes M1 GAS]
gi|19748995|gb|AAL98399.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS8232]
gi|21905328|gb|AAM80189.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS315]
gi|28810443|dbj|BAC63380.1| 30S ribosomal protein S6 [Streptococcus pyogenes SSI-1]
gi|50903987|gb|AAT87702.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10394]
gi|71803299|gb|AAX72652.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS6180]
gi|71854150|gb|AAZ52173.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS5005]
gi|94542698|gb|ABF32747.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS9429]
gi|94544639|gb|ABF34687.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10270]
gi|94546585|gb|ABF36632.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS2096]
gi|134271417|emb|CAM29637.1| 30S ribosomal protein S6 [Streptococcus pyogenes str. Manfredo]
gi|209541126|gb|ACI61702.1| SSU ribosomal protein S6p [Streptococcus pyogenes NZ131]
gi|242391907|dbj|BAH82366.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304431017|gb|EFM34024.1| 30S ribosomal protein S6 [Streptococcus pyogenes ATCC 10782]
gi|322412658|gb|EFY03566.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323127999|gb|ADX25296.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 96
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAAALNEFDRLSKINGDILRHMIVKLDA 96
>gi|125717304|ref|YP_001034437.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK36]
gi|322387420|ref|ZP_08061030.1| 30S ribosomal protein S6 [Streptococcus infantis ATCC 700779]
gi|322391657|ref|ZP_08065125.1| 30S ribosomal protein S6 [Streptococcus peroris ATCC 700780]
gi|323353391|ref|ZP_08087924.1| 30S ribosomal protein S6 [Streptococcus sanguinis VMC66]
gi|166227394|sp|A3CL32|RS6_STRSV RecName: Full=30S ribosomal protein S6
gi|125497221|gb|ABN43887.1| 30S ribosomal protein S6, putative [Streptococcus sanguinis SK36]
gi|321141949|gb|EFX37444.1| 30S ribosomal protein S6 [Streptococcus infantis ATCC 700779]
gi|321145468|gb|EFX40861.1| 30S ribosomal protein S6 [Streptococcus peroris ATCC 700780]
gi|322121337|gb|EFX93100.1| 30S ribosomal protein S6 [Streptococcus sanguinis VMC66]
gi|325690405|gb|EGD32409.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK115]
gi|325693671|gb|EGD35590.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK150]
gi|325697623|gb|EGD39508.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK160]
gi|327459370|gb|EGF05716.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1]
gi|327469242|gb|EGF14714.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK330]
gi|327472791|gb|EGF18218.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK408]
gi|327490586|gb|EGF22367.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1058]
gi|328945791|gb|EGG39942.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1087]
gi|332363246|gb|EGJ41031.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK49]
gi|332363796|gb|EGJ41575.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK355]
gi|332364670|gb|EGJ42439.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1059]
Length = 96
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|289766385|ref|ZP_06525763.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
gi|289717940|gb|EFD81952.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
Length = 105
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREETINQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 72 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVV 102
>gi|325120265|emb|CBZ55819.1| putative ribosomal protein S6 [Neospora caninum Liverpool]
Length = 398
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y V L R D+ IK+ + Y +Q+ V G R +AYR++K A+ V M
Sbjct: 276 YRVVALFRPDMPLPNIKEAVRPYVDQLQQWRCRNLRVTYRGYRRLAYRVKKKDSAHVVEM 335
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
P+A+H + K+ +D+N++R + L
Sbjct: 336 TFDLLPSAVHYLHVKLNLDDNIIRFMIL 363
>gi|312863010|ref|ZP_07723248.1| ribosomal protein S6 [Streptococcus vestibularis F0396]
gi|311100546|gb|EFQ58751.1| ribosomal protein S6 [Streptococcus vestibularis F0396]
Length = 96
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDDAALNEFDRLSKINGDILRHMIVKLDA 96
>gi|325142506|gb|EGC64907.1| ribosomal protein S6 [Neisseria meningitidis 961-5945]
Length = 80
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
G R +AY I K KA+YV MNI + P + E++ R ++ VLR LT+
Sbjct: 1 GRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTI 48
>gi|237743346|ref|ZP_04573827.1| SSU ribosomal protein S6P [Fusobacterium sp. 7_1]
gi|256028464|ref|ZP_05442298.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
gi|229433125|gb|EEO43337.1| SSU ribosomal protein S6P [Fusobacterium sp. 7_1]
Length = 94
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREETINQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 61 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVV 91
>gi|281356647|ref|ZP_06243138.1| ribosomal protein S6 [Victivallis vadensis ATCC BAA-548]
gi|281316774|gb|EFB00797.1| ribosomal protein S6 [Victivallis vadensis ATCC BAA-548]
Length = 109
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE VF+L + + ++ LI GG + +G R Y I K + Y
Sbjct: 1 MKKYEAVFILDIRRTDDEGAAFCKEFSELIASLGGTLESTTPMGRRQFTYEIDKRKAGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD---SHEQSPT 101
A + ++K K ++DE +LR+L ++ D + E +P
Sbjct: 61 FDFVFELETAKVKDIKEKYKLDERILRNLIVIYDRPAATENAPV 104
>gi|296875863|ref|ZP_06899924.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 15912]
gi|312868241|ref|ZP_07728441.1| ribosomal protein S6 [Streptococcus parasanguinis F0405]
gi|322390177|ref|ZP_08063709.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 903]
gi|296433104|gb|EFH18890.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 15912]
gi|311095986|gb|EFQ54230.1| ribosomal protein S6 [Streptococcus parasanguinis F0405]
gi|321143137|gb|EFX38583.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 903]
Length = 96
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + VD+
Sbjct: 61 HIVNVEANDAVALNEFDRLSKINGDILRHMIVKVDA 96
>gi|223039667|ref|ZP_03609953.1| ribosomal protein S6 [Campylobacter rectus RM3267]
gi|222879050|gb|EEF14145.1| ribosomal protein S6 [Campylobacter rectus RM3267]
Length = 128
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG + V +G R +AY ++K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVSAKVDFVKEILTKNGANIASVQTMGTRKLAYTVKKYERGTY 60
Query: 61 VFMNIASPPAAIHEM 75
+ +P AI E+
Sbjct: 61 FVVYFEAPTQAIAEV 75
>gi|46190915|ref|ZP_00120886.2| COG0360: Ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|189440081|ref|YP_001955162.1| 30S ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|213691155|ref|YP_002321741.1| ribosomal protein S6 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227545706|ref|ZP_03975755.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622620|ref|ZP_04665651.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291455935|ref|ZP_06595325.1| ribosomal protein S6 [Bifidobacterium breve DSM 20213]
gi|296453409|ref|YP_003660552.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133419|ref|YP_004000758.1| rpsf [Bifidobacterium longum subsp. longum BBMN68]
gi|322688389|ref|YP_004208123.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
157F]
gi|322690409|ref|YP_004219979.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|189428516|gb|ACD98664.1| Ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|213522616|gb|ACJ51363.1| ribosomal protein S6 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227213822|gb|EEI81661.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514617|gb|EEQ54484.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291382344|gb|EFE89862.1| ribosomal protein S6 [Bifidobacterium breve DSM 20213]
gi|291517550|emb|CBK71166.1| SSU ribosomal protein S6P [Bifidobacterium longum subsp. longum
F8]
gi|296182840|gb|ADG99721.1| ribosomal protein S6 [Bifidobacterium longum subsp. longum
JDM301]
gi|311772648|gb|ADQ02136.1| RpsF [Bifidobacterium longum subsp. longum BBMN68]
gi|320455265|dbj|BAJ65887.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320457213|dbj|BAJ67834.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320459725|dbj|BAJ70345.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
157F]
Length = 96
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG + G R +AY I + YV +
Sbjct: 6 YELMFIADPELDERGLKKLTEQYLELVTKEGGSFDEPDYWGRRKLAYEIAGKTEGNYVVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA E+ R + ++E+V+R+ L
Sbjct: 66 KYTAEPATSDELDRVLNLNESVIRTKIL 93
>gi|323695063|ref|ZP_08109206.1| ribosomal protein S6 [Clostridium symbiosum WAL-14673]
gi|323500865|gb|EGB16784.1| ribosomal protein S6 [Clostridium symbiosum WAL-14673]
Length = 95
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDEERAAAIEKVTGYITRFGGTVADIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFESDSVCPNEVEAHIRIMEPVIRYLCVRQDA 95
>gi|39995771|ref|NP_951722.1| 30S ribosomal protein S6 [Geobacter sulfurreducens PCA]
gi|61215651|sp|Q74FE4|RS6_GEOSL RecName: Full=30S ribosomal protein S6
gi|39982535|gb|AAR33995.1| ribosomal protein S6 [Geobacter sulfurreducens PCA]
gi|298504781|gb|ADI83504.1| ribosomal protein S6 [Geobacter sulfurreducens KN400]
Length = 117
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 49/87 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
+++YE + +++ ++ ++K + +I G + + + G+R +AY ++K+ + Y
Sbjct: 2 VRMYETIVIVQPELGDDELKGLTAKVTDIIGSFKGVLHRLEDWGVRKLAYPVKKSVRGRY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
++ I E++R++R+D+ VLR
Sbjct: 62 YYVRFDGDAPLIAELERRLRLDDKVLR 88
>gi|322516031|ref|ZP_08068968.1| 30S ribosomal protein S6 [Streptococcus vestibularis ATCC 49124]
gi|322125446|gb|EFX96792.1| 30S ribosomal protein S6 [Streptococcus vestibularis ATCC 49124]
Length = 125
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 30 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 89
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA++E R +I+ ++LR + + +D+
Sbjct: 90 HVVNVEANDDAALNEFDRLSKINGDILRHMIVKLDA 125
>gi|23465014|ref|NP_695617.1| 30S ribosomal protein S6 [Bifidobacterium longum NCC2705]
gi|317482745|ref|ZP_07941757.1| ribosomal protein S6 [Bifidobacterium sp. 12_1_47BFAA]
gi|32171566|sp|Q8G756|RS6_BIFLO RecName: Full=30S ribosomal protein S6
gi|23325616|gb|AAN24253.1| 30S ribosomal protein S6 [Bifidobacterium longum NCC2705]
gi|316915780|gb|EFV37190.1| ribosomal protein S6 [Bifidobacterium sp. 12_1_47BFAA]
Length = 97
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+ ++ + +K QY L+ + GG + G R +AY I + YV +
Sbjct: 7 YELMFIADPELDERGLKKLTEQYLELVTKEGGSFDEPDYWGRRKLAYEIAGKTEGNYVVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ PA E+ R + ++E+V+R+ L
Sbjct: 67 KYTAEPATSDELDRVLNLNESVIRTKIL 94
>gi|148988587|ref|ZP_01820020.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP6-BS73]
gi|147925788|gb|EDK76863.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP6-BS73]
Length = 96
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVKANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|15901385|ref|NP_345989.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TIGR4]
gi|15903439|ref|NP_358989.1| 30S ribosomal protein S6 [Streptococcus pneumoniae R6]
gi|111658384|ref|ZP_01409071.1| hypothetical protein SpneT_02000463 [Streptococcus pneumoniae
TIGR4]
gi|116516740|ref|YP_816830.1| 30S ribosomal protein S6 [Streptococcus pneumoniae D39]
gi|148984889|ref|ZP_01818142.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP3-BS71]
gi|148992569|ref|ZP_01822237.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP9-BS68]
gi|148997395|ref|ZP_01825000.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP11-BS70]
gi|149003237|ref|ZP_01828133.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS69]
gi|149007546|ref|ZP_01831181.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP18-BS74]
gi|149011779|ref|ZP_01832975.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP19-BS75]
gi|149021815|ref|ZP_01835822.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP23-BS72]
gi|168488797|ref|ZP_02712996.1| ribosomal protein S6 [Streptococcus pneumoniae SP195]
gi|168491567|ref|ZP_02715710.1| ribosomal protein S6 [Streptococcus pneumoniae CDC0288-04]
gi|168493442|ref|ZP_02717585.1| ribosomal protein S6 [Streptococcus pneumoniae CDC3059-06]
gi|168575263|ref|ZP_02721226.1| ribosomal protein S6 [Streptococcus pneumoniae MLV-016]
gi|169833108|ref|YP_001694946.1| 30S ribosomal protein S6 [Streptococcus pneumoniae Hungary19A-6]
gi|182684497|ref|YP_001836244.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CGSP14]
gi|221232252|ref|YP_002511405.1| 30S ribosomal protein S6 [Streptococcus pneumoniae ATCC 700669]
gi|225854981|ref|YP_002736493.1| 30S ribosomal protein S6 [Streptococcus pneumoniae JJA]
gi|225857167|ref|YP_002738678.1| 30S ribosomal protein S6 [Streptococcus pneumoniae P1031]
gi|225859296|ref|YP_002740806.1| 30S ribosomal protein S6 [Streptococcus pneumoniae 70585]
gi|225861372|ref|YP_002742881.1| 30S ribosomal protein S6 [Streptococcus pneumoniae Taiwan19F-14]
gi|237650223|ref|ZP_04524475.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CCRI 1974]
gi|237820894|ref|ZP_04596739.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CCRI 1974M2]
gi|298230726|ref|ZP_06964407.1| 30S ribosomal protein S6 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254953|ref|ZP_06978539.1| 30S ribosomal protein S6 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503277|ref|YP_003725217.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TCH8431/19A]
gi|303255327|ref|ZP_07341397.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS455]
gi|303260168|ref|ZP_07346140.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP-BS293]
gi|303262558|ref|ZP_07348499.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS292]
gi|303264960|ref|ZP_07350875.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS397]
gi|303266423|ref|ZP_07352311.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS457]
gi|303269401|ref|ZP_07355171.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS458]
gi|307068185|ref|YP_003877151.1| hypothetical protein SPAP_1563 [Streptococcus pneumoniae AP200]
gi|307127749|ref|YP_003879780.1| 30S ribosomal protein S6 [Streptococcus pneumoniae 670-6B]
gi|54039537|sp|P66603|RS6_STRR6 RecName: Full=30S ribosomal protein S6
gi|54041979|sp|P66602|RS6_STRPN RecName: Full=30S ribosomal protein S6
gi|122278324|sp|Q04JK8|RS6_STRP2 RecName: Full=30S ribosomal protein S6
gi|226695290|sp|B1ICW1|RS6_STRPI RecName: Full=30S ribosomal protein S6
gi|226695291|sp|B2IR60|RS6_STRPS RecName: Full=30S ribosomal protein S6
gi|254765455|sp|C1C8D0|RS6_STRP7 RecName: Full=30S ribosomal protein S6
gi|254765456|sp|B8ZLE1|RS6_STRPJ RecName: Full=30S ribosomal protein S6
gi|254765458|sp|C1CFC2|RS6_STRZJ RecName: Full=30S ribosomal protein S6
gi|254765459|sp|C1CLP0|RS6_STRZP RecName: Full=30S ribosomal protein S6
gi|254765460|sp|C1CSF9|RS6_STRZT RecName: Full=30S ribosomal protein S6
gi|14973031|gb|AAK75629.1| ribosomal protein S6 [Streptococcus pneumoniae TIGR4]
gi|15459047|gb|AAL00200.1| 30S Ribosomal protein S6 (S6) [Streptococcus pneumoniae R6]
gi|116077316|gb|ABJ55036.1| ribosomal protein S6 [Streptococcus pneumoniae D39]
gi|147756450|gb|EDK63491.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP11-BS70]
gi|147758697|gb|EDK65694.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS69]
gi|147760905|gb|EDK67875.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP18-BS74]
gi|147764210|gb|EDK71142.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP19-BS75]
gi|147922911|gb|EDK74027.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP3-BS71]
gi|147928586|gb|EDK79600.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP9-BS68]
gi|147930051|gb|EDK81038.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP23-BS72]
gi|168995610|gb|ACA36222.1| ribosomal protein S6 [Streptococcus pneumoniae Hungary19A-6]
gi|182629831|gb|ACB90779.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CGSP14]
gi|183572796|gb|EDT93324.1| ribosomal protein S6 [Streptococcus pneumoniae SP195]
gi|183574214|gb|EDT94742.1| ribosomal protein S6 [Streptococcus pneumoniae CDC0288-04]
gi|183576305|gb|EDT96833.1| ribosomal protein S6 [Streptococcus pneumoniae CDC3059-06]
gi|183578693|gb|EDT99221.1| ribosomal protein S6 [Streptococcus pneumoniae MLV-016]
gi|220674713|emb|CAR69286.1| 30S ribosomal protein S6 [Streptococcus pneumoniae ATCC 700669]
gi|225720251|gb|ACO16105.1| ribosomal protein S6 [Streptococcus pneumoniae 70585]
gi|225722450|gb|ACO18303.1| ribosomal protein S6 [Streptococcus pneumoniae JJA]
gi|225725200|gb|ACO21052.1| ribosomal protein S6 [Streptococcus pneumoniae P1031]
gi|225726938|gb|ACO22789.1| ribosomal protein S6 [Streptococcus pneumoniae Taiwan19F-14]
gi|298238872|gb|ADI70003.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TCH8431/19A]
gi|301794550|emb|CBW36994.1| 30S ribosomal protein S6 [Streptococcus pneumoniae INV104]
gi|301800374|emb|CBW33005.1| 30S ribosomal protein S6 [Streptococcus pneumoniae OXC141]
gi|301802259|emb|CBW35011.1| 30S ribosomal protein S6 [Streptococcus pneumoniae INV200]
gi|302597695|gb|EFL64771.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS455]
gi|302636275|gb|EFL66769.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS292]
gi|302638665|gb|EFL69128.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP-BS293]
gi|302641069|gb|EFL71446.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS458]
gi|302644001|gb|EFL74260.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS457]
gi|302645479|gb|EFL75711.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS397]
gi|306409722|gb|ADM85149.1| hypothetical protein SPAP_1563 [Streptococcus pneumoniae AP200]
gi|306484811|gb|ADM91680.1| ribosomal protein S6 [Streptococcus pneumoniae 670-6B]
gi|327389727|gb|EGE88072.1| ribosomal protein S6 [Streptococcus pneumoniae GA04375]
gi|332072334|gb|EGI82817.1| ribosomal protein S6 [Streptococcus pneumoniae GA17570]
gi|332073879|gb|EGI84357.1| ribosomal protein S6 [Streptococcus pneumoniae GA41301]
gi|332074296|gb|EGI84773.1| ribosomal protein S6 [Streptococcus pneumoniae GA17545]
gi|332199586|gb|EGJ13661.1| ribosomal protein S6 [Streptococcus pneumoniae GA41317]
gi|332200103|gb|EGJ14176.1| ribosomal protein S6 [Streptococcus pneumoniae GA47368]
gi|332200982|gb|EGJ15053.1| ribosomal protein S6 [Streptococcus pneumoniae GA47901]
Length = 96
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|269217869|ref|ZP_06161723.1| ribosomal protein S6 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212804|gb|EEZ79144.1| ribosomal protein S6 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 95
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 47/88 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + I + + + ++ GG + V+ G R +AY I K + Y
Sbjct: 1 MRDYEMMIIIDPTVDERNITNFVDKLLQVVPNEGGTLEKVDIWGKRRLAYDINKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E +LR+
Sbjct: 61 VVVDMKATPETAQELDRQLGLNEAILRT 88
>gi|237739059|ref|ZP_04569540.1| SSU ribosomal protein S6P [Fusobacterium sp. 2_1_31]
gi|291460851|ref|ZP_06025541.2| ribosomal protein S6 [Fusobacterium periodonticum ATCC 33693]
gi|294783935|ref|ZP_06749257.1| ribosomal protein S6 [Fusobacterium sp. 1_1_41FAA]
gi|229423659|gb|EEO38706.1| SSU ribosomal protein S6P [Fusobacterium sp. 2_1_31]
gi|291380409|gb|EFE87927.1| ribosomal protein S6 [Fusobacterium periodonticum ATCC 33693]
gi|294479747|gb|EFG27526.1| ribosomal protein S6 [Fusobacterium sp. 1_1_41FAA]
Length = 105
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + + I Q SL+ NG + + G R +AY I K + +Y
Sbjct: 12 MKKYEIMYIINPTVLEEGRDELINQINSLLTANGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E V+R + + +D
Sbjct: 72 VLTTFEMDGTKLAEVEAKINIMEAVMRHIVVRLD 105
>gi|307705991|ref|ZP_07642814.1| ribosomal protein S6 [Streptococcus mitis SK564]
gi|307708376|ref|ZP_07644843.1| ribosomal protein S6 [Streptococcus mitis NCTC 12261]
gi|322377028|ref|ZP_08051521.1| ribosomal protein S6 [Streptococcus sp. M334]
gi|307615822|gb|EFN95028.1| ribosomal protein S6 [Streptococcus mitis NCTC 12261]
gi|307620410|gb|EFN99523.1| ribosomal protein S6 [Streptococcus mitis SK564]
gi|321282835|gb|EFX59842.1| ribosomal protein S6 [Streptococcus sp. M334]
Length = 96
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKTDA 96
>gi|15805139|ref|NP_293824.1| 30S ribosomal protein S6 [Deinococcus radiodurans R1]
gi|13959512|sp|Q9RY52|RS6_DEIRA RecName: Full=30S ribosomal protein S6
gi|6457765|gb|AAF09691.1|AE001873_1 ribosomal protein S6 [Deinococcus radiodurans R1]
Length = 102
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L +IS++Q++ ++ ++ G E+ +++LG R +AY++ K+R+ YY
Sbjct: 1 MNQYDLNLILNPNISAEQVQTEKDYIENAVRNAGAEISNLDDLGNRRLAYQVGKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I + + +R+ +NV R L +
Sbjct: 61 LMYTIKASGNPETAIASSLRLRDNVRRVLVV 91
>gi|269216496|ref|ZP_06160350.1| ribosomal protein S6 [Slackia exigua ATCC 700122]
gi|269130025|gb|EEZ61107.1| ribosomal protein S6 [Slackia exigua ATCC 700122]
Length = 110
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + ++ I +N G + V + G R +AY I + Y
Sbjct: 14 MKAYELLFFVSPTIEDEVRLAAMKRVETAINDNNGTIDNVEDWGRRKLAYEIAGLTEGDY 73
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
++ + P +I E+ R +RI + V+R
Sbjct: 74 TLIDFHADPESIAELDRILRITDAVVR 100
>gi|221195094|ref|ZP_03568150.1| ribosomal protein S6 [Atopobium rimae ATCC 49626]
gi|221184997|gb|EEE17388.1| ribosomal protein S6 [Atopobium rimae ATCC 49626]
Length = 97
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + S + + + I GG+V V + G R +A+ I K + Y
Sbjct: 1 MKAYELLFFVDPSSSEEVRAGVMKRIDVAIAAEGGKVDNVEDWGKRKLAFEIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P I E+ R +RI++ V R + +
Sbjct: 61 TLINFHADPTQIAELDRVLRINDAVKRHMIV 91
>gi|51894455|ref|YP_077146.1| 30S ribosomal protein S6 [Symbiobacterium thermophilum IAM 14863]
gi|61216175|sp|Q67J48|RS6_SYMTH RecName: Full=30S ribosomal protein S6
gi|51858144|dbj|BAD42302.1| 30S ribosomal protein S6 [Symbiobacterium thermophilum IAM 14863]
Length = 95
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + R D+ ++ + LI NGG V + + +AY I+ R+ +Y
Sbjct: 1 MRKYEMMVIARPDLDEAGLQALSDKIAELITSNGGTVESQDAWKKQRLAYEIKHLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
N P +E+ R ++I + V+R L +
Sbjct: 61 SVFNFTGEPRTANELNRVLKITDEVVRFLIV 91
>gi|298345835|ref|YP_003718522.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 43063]
gi|304390462|ref|ZP_07372415.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315654408|ref|ZP_07907316.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 51333]
gi|315657670|ref|ZP_07910552.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235896|gb|ADI67028.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 43063]
gi|304326218|gb|EFL93463.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315491443|gb|EFU81060.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 51333]
gi|315492142|gb|EFU81751.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 95
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 50/88 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ +++ GG+V ++ G R +AY I K Y
Sbjct: 1 MRKYEMMVIIDPEVDERTVEPSMSALFGQVKDLGGKVEKLDVWGKRKLAYPILKKTDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E++LR+
Sbjct: 61 VVVDMETTPEIAKELDRQLGLNESILRT 88
>gi|50955942|ref|YP_063230.1| 30S ribosomal protein S6 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|61215510|sp|Q6ABW7|RS6_LEIXX RecName: Full=30S ribosomal protein S6
gi|50952424|gb|AAT90125.1| 30S ribosomal protein S6 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 128
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L +I + + ++ ++ ++++ +GG + V+ G R +AY I K + Y
Sbjct: 1 MHQYELMVILDPEIDERTVAPSLDKFLNVVRNDGGTIDNVDIWGRRRLAYEINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + + E+ R++++ E V+R+ L D
Sbjct: 61 AVVQLTATGDTTKELDRQLKLSEAVMRTKVLRAD 94
>gi|329576167|gb|EGG57685.1| ribosomal protein S6 [Enterococcus faecalis TX1467]
Length = 105
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + + ++ +++++NG EV + R +AY + R+ Y +
Sbjct: 7 YEIMYIIRPNIDEEAKTALVERFDTILKDNGAEVIESKDWEKRRLAYEMNGFREGIYHIV 66
Query: 64 NIASP--PAAIHEMKRKMRIDENVLRSLTL 91
N+ SP AI+E R +I+++++R + +
Sbjct: 67 NVTSPSTAGAINEFDRLAKINDDIIRHMIV 96
>gi|324990244|gb|EGC22182.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK353]
gi|332357974|gb|EGJ35807.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1056]
Length = 96
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|312879776|ref|ZP_07739576.1| SSU ribosomal protein S6P [Aminomonas paucivorans DSM 12260]
gi|310783067|gb|EFQ23465.1| SSU ribosomal protein S6P [Aminomonas paucivorans DSM 12260]
Length = 94
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L D+ K +Y +++ G EV + G R +AY I K + Y
Sbjct: 1 MRPYELVTILTADLEDP--KTVAEEYVEVLRGLGAEVEKFDLWGKRRLAYPIAKQNEGVY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V PA I EM+R + + +LR L +
Sbjct: 59 VLYTFKHDPAQIREMERVLSLKPQILRHLVI 89
>gi|227876515|ref|ZP_03994627.1| ribosomal protein S6 [Mobiluncus mulieris ATCC 35243]
gi|269977717|ref|ZP_06184677.1| ribosomal protein S6 [Mobiluncus mulieris 28-1]
gi|306817476|ref|ZP_07451220.1| 30S ribosomal protein S6 [Mobiluncus mulieris ATCC 35239]
gi|307699801|ref|ZP_07636852.1| ribosomal protein S6 [Mobiluncus mulieris FB024-16]
gi|227843056|gb|EEJ53253.1| ribosomal protein S6 [Mobiluncus mulieris ATCC 35243]
gi|269934021|gb|EEZ90595.1| ribosomal protein S6 [Mobiluncus mulieris 28-1]
gi|304649700|gb|EFM46981.1| 30S ribosomal protein S6 [Mobiluncus mulieris ATCC 35239]
gi|307614839|gb|EFN94057.1| ribosomal protein S6 [Mobiluncus mulieris FB024-16]
Length = 95
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 49/88 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ + + GG+V ++ G R +AY I K Y
Sbjct: 1 MRKYEMMVIVDPEVDERTVEPSMSALFGQVNDLGGKVEKLDVWGKRRLAYPILKKTDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRS 88
V +++ + P E+ R++ ++E++LR+
Sbjct: 61 VVVDMETTPEVAKELDRQLSLNESILRT 88
>gi|163846600|ref|YP_001634644.1| 30S ribosomal protein S6 [Chloroflexus aurantiacus J-10-fl]
gi|163667889|gb|ABY34255.1| ribosomal protein S6 [Chloroflexus aurantiacus J-10-fl]
Length = 145
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 4 YEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIR------ 53
YE V ++ ++++ I I + + +++ GG++ V++ G R +AY IR
Sbjct: 18 YELVVIINPLFANEEGITANIDRIRQTVEQLGGKINTVSQSSPWGRRKLAYPIREYVTGE 77
Query: 54 ----KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
K + YYVF + A + E+ R +R+++N+LR L +LV+
Sbjct: 78 ASRRKFTEGYYVFFTLELSAAKVAELDRAIRLNDNILRHLLVLVE 122
>gi|270292430|ref|ZP_06198641.1| ribosomal protein S6 [Streptococcus sp. M143]
gi|293365828|ref|ZP_06612533.1| 30S ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|306829851|ref|ZP_07463038.1| 30S ribosomal protein S6 [Streptococcus mitis ATCC 6249]
gi|307703303|ref|ZP_07640248.1| ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|315613511|ref|ZP_07888418.1| 30S ribosomal protein S6 [Streptococcus sanguinis ATCC 49296]
gi|322375592|ref|ZP_08050104.1| ribosomal protein S6 [Streptococcus sp. C300]
gi|331266014|ref|YP_004325644.1| 30S ribosomal protein S6 [Streptococcus oralis Uo5]
gi|270278409|gb|EFA24255.1| ribosomal protein S6 [Streptococcus sp. M143]
gi|291315652|gb|EFE56100.1| 30S ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|304427862|gb|EFM30955.1| 30S ribosomal protein S6 [Streptococcus mitis ATCC 6249]
gi|307623169|gb|EFO02161.1| ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|315314202|gb|EFU62247.1| 30S ribosomal protein S6 [Streptococcus sanguinis ATCC 49296]
gi|321279300|gb|EFX56341.1| ribosomal protein S6 [Streptococcus sp. C300]
gi|326682686|emb|CBZ00303.1| 30S ribosomal protein S6 [Streptococcus oralis Uo5]
Length = 96
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|94984274|ref|YP_603638.1| 30S ribosomal protein S6 [Deinococcus geothermalis DSM 11300]
gi|166226825|sp|Q1J215|RS6_DEIGD RecName: Full=30S ribosomal protein S6
gi|94554555|gb|ABF44469.1| ribosomal protein S6 [Deinococcus geothermalis DSM 11300]
Length = 102
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++S++Q++ ++ ++ NG EV ++++G R +AY I K+R+ YY
Sbjct: 1 MNQYDLNLILNPNLSAEQLQIEKDYIETTLRNNGAEVTKLDDVGNRRMAYPIAKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I + ++ +R+ +NV R L +
Sbjct: 61 LMYTIRAGGNPEKDIASTLRLRDNVRRVLVV 91
>gi|323485449|ref|ZP_08090797.1| hypothetical protein HMPREF9474_02548 [Clostridium symbiosum
WAL-14163]
gi|323401312|gb|EGA93662.1| hypothetical protein HMPREF9474_02548 [Clostridium symbiosum
WAL-14163]
Length = 95
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDEERAAAIEKVTGYITRFGGTVVDIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFESDSVCPNEVEAHIRIMEPVIRYLCVRQDA 95
>gi|55737711|gb|AAV61353.1| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311]
gi|55739631|gb|AAV63272.1| 30S ribosomal protein S6 [Streptococcus thermophilus CNRZ1066]
Length = 112
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 17 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 76
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 77 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 112
>gi|222524396|ref|YP_002568867.1| 30S ribosomal protein S6 [Chloroflexus sp. Y-400-fl]
gi|222448275|gb|ACM52541.1| ribosomal protein S6 [Chloroflexus sp. Y-400-fl]
Length = 135
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 4 YEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIR------ 53
YE V ++ ++++ I I + + +++ GG++ V++ G R +AY IR
Sbjct: 8 YELVVIINPLFANEEGITANIDRIRQTVEQLGGKINTVSQSSPWGRRKLAYPIREYVTGE 67
Query: 54 ----KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
K + YYVF + A + E+ R +R+++N+LR L +LV+
Sbjct: 68 ASRRKFTEGYYVFFTLELSAAKVAELDRAIRLNDNILRHLLVLVE 112
>gi|82408150|pdb|2BXJ|A Chain A, Double Mutant Of The Ribosomal Protein S6
gi|82408151|pdb|2BXJ|B Chain B, Double Mutant Of The Ribosomal Protein S6
Length = 101
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q + G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRAAENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P +++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDAARELRIRDNVRR--VMVVKSQE 95
>gi|116782057|gb|ABK22352.1| unknown [Picea sitchensis]
gi|116793661|gb|ABK26832.1| unknown [Picea sitchensis]
Length = 206
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR------- 56
YE + +LR DIS ++ +Y+ +I GG V GM +AY I+K
Sbjct: 103 YETMAVLRPDISEEERLALTQRYEEIIVAGGGMGVEVFNRGMIPLAYAIKKKNLSGKSNT 162
Query: 57 --KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y+ + P +I E+++K++ D++V+RS T
Sbjct: 163 YLDGVYLLFTYFTKPESIPELEKKLKTDDDVIRSSTF 199
>gi|51209874|ref|YP_063538.1| ribosomal protein S6 [Gracilaria tenuistipitata var. liui]
gi|68052942|sp|Q6B922|RR6_GRATL RecName: Full=30S ribosomal protein S6, chloroplastic
gi|50657628|gb|AAT79613.1| 30S ribosomal protein S6 [Gracilaria tenuistipitata var. liui]
Length = 103
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++L+ +I+ + I +Y++LI++ GG +V G R + Y I+ YV +
Sbjct: 6 YETIYILQPNITESENLILINEYKALIKKYGGNNIVVQHKGRRHLNYNIKSYYDGIYVQI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + + +++ MR+ ++V+R +T+
Sbjct: 66 NYTASSNLVRILEKAMRLSQHVIRYMTI 93
>gi|328956359|ref|YP_004373692.1| SSU ribosomal protein S6P [Coriobacterium glomerans PW2]
gi|328456683|gb|AEB07877.1| SSU ribosomal protein S6P [Coriobacterium glomerans PW2]
Length = 97
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + I + G+V V E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPALDVESRAAVMKRIDVAIADGSGKVDNVEEWGKRKLAYEINKLIEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P I E+ R +R+ + V R + + D E
Sbjct: 61 TLINFHADPTQIAELDRVLRVTDAVQRHMIVRRDDQE 97
>gi|116780928|gb|ABK21884.1| unknown [Picea sitchensis]
Length = 206
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR------- 56
YE + +LR DIS ++ +Y+ +I GG V GM +AY I+K
Sbjct: 103 YETMAVLRPDISEEERLALTQRYEEIIVAGGGMGVEVFNRGMIPLAYAIKKKNLSGKSNT 162
Query: 57 --KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y+ + P +I E+++K++ D++V+RS T
Sbjct: 163 YLDGVYLLFTYFTKPESIPELEKKLKTDDDVIRSSTF 199
>gi|257065462|ref|YP_003145134.1| ribosomal protein S6 [Slackia heliotrinireducens DSM 20476]
gi|256793115|gb|ACV23785.1| ribosomal protein S6 [Slackia heliotrinireducens DSM 20476]
Length = 97
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + ++ I N G+V V G R +AY I + Y
Sbjct: 1 MKAYEMLFFVAPTLDDETRLAAMKRVETTIAANNGQVDNVENWGRRKLAYEIAGLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
++ PA++ E+ R +RI + ++R
Sbjct: 61 TLIDFHMDPASVAELDRVLRITDAIVR 87
>gi|307706200|ref|ZP_07643017.1| ribosomal protein S6 [Streptococcus mitis SK321]
gi|307618390|gb|EFN97540.1| ribosomal protein S6 [Streptococcus mitis SK321]
Length = 96
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKTDA 96
>gi|237786618|ref|YP_002907323.1| 30S ribosomal protein S6 [Corynebacterium kroppenstedtii DSM
44385]
gi|259495328|sp|C4LGG1|RS6_CORK4 RecName: Full=30S ribosomal protein S6
gi|237759530|gb|ACR18780.1| 30S ribosomal protein S6 [Corynebacterium kroppenstedtii DSM
44385]
Length = 95
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ +Y ++++ G V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEIMIILDPAQDERTVAPSLDKYLDVVRKEKGNVDKVDIWGKRRLAYPIQKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ A + E+ R + ++++VLR+ L D+
Sbjct: 61 VVVDFTCESATVLEVDRLLNLNDSVLRTKVLRTDA 95
>gi|319939921|ref|ZP_08014276.1| 30S ribosomal protein S6 [Streptococcus anginosus 1_2_62CV]
gi|319810932|gb|EFW07251.1| 30S ribosomal protein S6 [Streptococcus anginosus 1_2_62CV]
Length = 96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEAEDAVALNEFDRLSKINADILRHMIVKLDA 96
>gi|320547487|ref|ZP_08041773.1| 30S ribosomal protein S6 [Streptococcus equinus ATCC 9812]
gi|320447832|gb|EFW88589.1| 30S ribosomal protein S6 [Streptococcus equinus ATCC 9812]
Length = 96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEAEDAVALNEFDRLSKINGDILRHMIVKIDA 96
>gi|257789799|ref|YP_003180405.1| 30S ribosomal protein S6 [Eggerthella lenta DSM 2243]
gi|317489258|ref|ZP_07947775.1| ribosomal protein S6 [Eggerthella sp. 1_3_56FAA]
gi|325832225|ref|ZP_08165224.1| ribosomal protein S6 [Eggerthella sp. HGA1]
gi|257473696|gb|ACV54016.1| ribosomal protein S6 [Eggerthella lenta DSM 2243]
gi|316911659|gb|EFV33251.1| ribosomal protein S6 [Eggerthella sp. 1_3_56FAA]
gi|325486061|gb|EGC88515.1| ribosomal protein S6 [Eggerthella sp. HGA1]
Length = 97
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + + I E G V V+ G R +AY I Y
Sbjct: 1 MKAYELLFFVAPSIDEETRAAVMKRIDTTIAEGKGTVDNVDNWGKRKLAYEINGLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + PA + E+ R +RI + V R + +
Sbjct: 61 TLIDFHADPADVAELDRVLRITDAVERHMIV 91
>gi|257871395|ref|ZP_05651048.1| ribosomal protein S6 [Enterococcus gallinarum EG2]
gi|257805559|gb|EEV34381.1| ribosomal protein S6 [Enterococcus gallinarum EG2]
Length = 99
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + I ++ +++ +NG EV + R +AY + R+ Y +
Sbjct: 6 YEILYIIRPNIDEEAKSALIARFDTILTDNGAEVIESKDWQKRRLAYEMDGFREGIYHIV 65
Query: 64 NIASP--PAAIHEMKRKMRIDENVLRSLTL 91
++SP +AI+E R +I+++++R + +
Sbjct: 66 KVSSPSNASAINEFDRLAKINDDIIRHMIV 95
>gi|322386750|ref|ZP_08060374.1| 30S ribosomal protein S6 [Streptococcus cristatus ATCC 51100]
gi|321269032|gb|EFX51968.1| 30S ribosomal protein S6 [Streptococcus cristatus ATCC 51100]
Length = 96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEGAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|171779260|ref|ZP_02920231.1| hypothetical protein STRINF_01108 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282316|gb|EDT47743.1| hypothetical protein STRINF_01108 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEAEDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|289168356|ref|YP_003446625.1| 30S ribosomal protein S6 [Streptococcus mitis B6]
gi|288907923|emb|CBJ22763.1| 30S ribosomal protein S6 [Streptococcus mitis B6]
Length = 96
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKIDA 96
>gi|260662544|ref|ZP_05863439.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
gi|260553235|gb|EEX26178.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
Length = 97
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R DI + + ++ ++ +NG V + G R AY+I K + Y +
Sbjct: 6 YEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWGTRRFAYQIGKYTEGTYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A A+++E R + +++LR + +
Sbjct: 66 NVTADSDASLNEFDRLAKFSDDILRHMIV 94
>gi|225378674|ref|ZP_03755895.1| hypothetical protein ROSEINA2194_04344 [Roseburia inulinivorans
DSM 16841]
gi|225209511|gb|EEG91865.1| hypothetical protein ROSEINA2194_04344 [Roseburia inulinivorans
DSM 16841]
Length = 96
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG V V + G + +AY I+K + YY
Sbjct: 1 MNKYELALVVSAKIEDDARTATVEKAKDYIVRAGGTVTEVEDWGKKKLAYDIQKMSEGYY 60
Query: 61 VFMNI---ASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ A+ PAA+ + +RI +NVLR L +
Sbjct: 61 YFIQFEAEATVPAAVEQ---DVRIMDNVLRFLCV 91
>gi|332639081|ref|ZP_08417944.1| ribosomal protein S6 [Weissella cibaria KACC 11862]
Length = 99
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ +NG V + R AY I R+ Y +
Sbjct: 3 YELTYIIRPDMDADAKKALVERFDKILADNGATVAESKDWSSRRFAYEIAGYREGTYHIV 62
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N A AAI+E R +I +++LR + +
Sbjct: 63 NFTAEDDAAINEFDRLAKISQDILRHMVV 91
>gi|302669610|ref|YP_003829570.1| ribosomal protein S6 RpsF [Butyrivibrio proteoclasticus B316]
gi|302394083|gb|ADL32988.1| ribosomal protein S6 RpsF [Butyrivibrio proteoclasticus B316]
Length = 95
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I I + + I+++GG++ V++ G + +AY I K + +Y
Sbjct: 1 MNKYELAVVVSAKIEDDARTAVIEKVKKTIEKHGGQITNVDDWGKKKLAYEIEKMTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + E++ +MRI + V+R L +
Sbjct: 61 YFIQFDAEATTPAEIESRMRIMDGVIRYLCV 91
>gi|161611280|ref|YP_140168.2| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311]
gi|161936363|ref|YP_142087.2| 30S ribosomal protein S6 [Streptococcus thermophilus CNRZ1066]
gi|91207795|sp|Q5LY48|RS6_STRT1 RecName: Full=30S ribosomal protein S6
gi|91207796|sp|Q5M2Q3|RS6_STRT2 RecName: Full=30S ribosomal protein S6
Length = 96
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|184158694|ref|YP_001847033.1| 30S ribosomal protein S6 [Acinetobacter baumannii ACICU]
gi|183210288|gb|ACC57686.1| putative 30S ribosomal protein S6 [Acinetobacter baumannii ACICU]
Length = 107
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
+ +Y S I+E G++ + + G R +AY I K KA+Y+ MN+ + + E++ R +
Sbjct: 2 VERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYILMNVECGQSTLDELEELFRYN 61
Query: 83 ENVLRSLTL 91
+ ++R+L +
Sbjct: 62 DAIIRNLII 70
>gi|328956389|ref|YP_004373775.1| 30S ribosomal protein S6 [Carnobacterium sp. 17-4]
gi|328672713|gb|AEB28759.1| 30S ribosomal protein S6 [Carnobacterium sp. 17-4]
Length = 99
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE ++++R +I + + ++ +++++NG E+ + R AY I+ + Y++
Sbjct: 7 YEILYIIRPNIEEAEKAALVERFDTILKDNGAEITESKDWSKRRFAYEIKDFHEGIYHIV 66
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
A+ AAI+E R +I ++LR +T+
Sbjct: 67 KLTANDAAAINEFDRLSKISSDILRHMTI 95
>gi|315925595|ref|ZP_07921805.1| 30S ribosomal protein S6 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621136|gb|EFV01107.1| 30S ribosomal protein S6 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 95
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
MK YE +F+L ++ + I + + +++I E GEV V+E G R +AY I K Y
Sbjct: 1 MKAYETMFVLVPELEKEAIDAEVARVKAII-EKAGEVENVDEWGSRKLAYTIDNKYTDGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
YV ++ + + + ++ I+++ +R + +
Sbjct: 60 YVVIDFKAENSVLDDLNHLYLINDSYIRDIII 91
>gi|153810613|ref|ZP_01963281.1| hypothetical protein RUMOBE_00994 [Ruminococcus obeum ATCC 29174]
gi|149833792|gb|EDM88873.1| hypothetical protein RUMOBE_00994 [Ruminococcus obeum ATCC 29174]
Length = 95
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + +S I G V V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVSAKVEDEVRDAVVEKAKSYIARYNGNVTEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|219849266|ref|YP_002463699.1| 30S ribosomal protein S6 [Chloroflexus aggregans DSM 9485]
gi|219543525|gb|ACL25263.1| ribosomal protein S6 [Chloroflexus aggregans DSM 9485]
Length = 137
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 4 YEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIR------ 53
YE V ++ ++++ I I + + +++ GG+V V++ G R +AY IR
Sbjct: 8 YELVIIINPLYANEEGITANIDRIKQTVEQLGGQVNTVSQSSPWGRRKLAYPIREYVVGE 67
Query: 54 ----KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
K + YYVF + + + E+ R +R+++N+LR L +LV++
Sbjct: 68 ASRRKFTEGYYVFFTLTLNASKVAELDRAIRLNDNILRHLLVLVEN 113
>gi|116628446|ref|YP_821065.1| 30S ribosomal protein S6 [Streptococcus thermophilus LMD-9]
gi|122266959|sp|Q03IV3|RS6_STRTD RecName: Full=30S ribosomal protein S6
gi|116101723|gb|ABJ66869.1| SSU ribosomal protein S6P [Streptococcus thermophilus LMD-9]
gi|312279066|gb|ADQ63723.1| 30S ribosomal protein S6 [Streptococcus thermophilus ND03]
Length = 96
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGIY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|223936331|ref|ZP_03628243.1| ribosomal protein S6 [bacterium Ellin514]
gi|223894849|gb|EEF61298.1| ribosomal protein S6 [bacterium Ellin514]
Length = 103
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI--RKNRKA 58
MK YE +F+L + +K+TI Q I GG V V ++ R A R+ ++N
Sbjct: 1 MKRYEGLFILNTAGKEESLKETIDQLSDEINAAGGRVETVQKMDKRNFA-RVADKRNSSG 59
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+YV + P+AI +++ + ++ +V R +
Sbjct: 60 FYVNVIFECKPSAITQLQTRFALNADVYRVM 90
>gi|116619043|ref|YP_819414.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097890|gb|ABJ63041.1| SSU ribosomal protein S6P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 98
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ +++ +NG ++ + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLDADAKKTLVERFDAILTDNGATIQKSADWATRRFAYEIAGYREGTYHII 64
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N A AI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDKAINEFDRLAKISQDILRHMIVKRDA 97
>gi|313679093|ref|YP_004056832.1| SSU ribosomal protein s6p [Oceanithermus profundus DSM 14977]
gi|313151808|gb|ADR35659.1| SSU ribosomal protein S6P [Oceanithermus profundus DSM 14977]
Length = 102
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ Q++ Q+ + ++ EV+ ++E G R +AY I K+ + YY
Sbjct: 1 MPQYDVGIILNPNLEPTQLQLEKDMIQAALDKHKAEVKAIDEWGNRRLAYPIEKDPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+F + ++ ++RI +NV R L +
Sbjct: 61 IFYTVEMEAGEAAPLEAELRIRDNVRRVLIV 91
>gi|255636266|gb|ACU18473.1| unknown [Glycine max]
Length = 228
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++L+ + +++ + Q ++E G+V +N+ GMR AY+I+K A+Y+ +
Sbjct: 143 YEVMYLIHEK-HEEEVVAVNEKIQDFLREKKGQVWRLNDWGMRRPAYKIKKANNAHYMLI 201
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLT 90
N I++ K + DE V+R L
Sbjct: 202 NFELDAKYINDFKTLLDQDERVIRHLV 228
>gi|222153666|ref|YP_002562843.1| 30S ribosomal protein S6 [Streptococcus uberis 0140J]
gi|254765457|sp|B9DVK4|RS6_STRU0 RecName: Full=30S ribosomal protein S6
gi|222114479|emb|CAR43337.1| 30S ribosomal protein S6 [Streptococcus uberis 0140J]
Length = 96
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESEDAVALNEFDRLAKINGDILRHMIVKLDA 96
>gi|294791317|ref|ZP_06756474.1| ribosomal protein S6 [Scardovia inopinata F0304]
gi|294457788|gb|EFG26142.1| ribosomal protein S6 [Scardovia inopinata F0304]
Length = 98
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + ++ + +K + QY + G V V+ G R +AY I + Y +
Sbjct: 6 YELMLIADPELDDRALKKLVDQYMETVTNEKGTVEKVDIWGRRKLAYEINGKTEGAYAVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+S PA E+ R + ++E+++R+ L D+
Sbjct: 66 EYSSEPATSAELDRLLNLNESIVRTKILRKDA 97
>gi|288906101|ref|YP_003431323.1| ribosomal protein S6 [Streptococcus gallolyticus UCN34]
gi|306832140|ref|ZP_07465294.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732827|emb|CBI14403.1| ribosomal protein S6 [Streptococcus gallolyticus UCN34]
gi|304425579|gb|EFM28697.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 96
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVEAEDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|161485955|ref|NP_739430.2| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
gi|32171562|sp|Q8FLP8|RS6_COREF RecName: Full=30S ribosomal protein S6
Length = 95
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 61 AVIDLKCESATVLELDRVLNLNDGVLRTKVLRLD 94
>gi|315222301|ref|ZP_07864207.1| ribosomal protein S6 [Streptococcus anginosus F0211]
gi|315188634|gb|EFU22343.1| ribosomal protein S6 [Streptococcus anginosus F0211]
Length = 141
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 46 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 105
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A A++E R +I+ ++LR + + +D+
Sbjct: 106 HIVNVEAEDAVALNEFDRLSKINADILRHMIVKLDA 141
>gi|310830127|ref|YP_003962484.1| ribosomal protein S6 [Eubacterium limosum KIST612]
gi|308741861|gb|ADO39521.1| ribosomal protein S6 [Eubacterium limosum KIST612]
Length = 95
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M+ YE VF+L+ ++ + I + + I GEV V+E G R +AY I +K + Y
Sbjct: 1 MRAYETVFVLQPELEKEVTDSWIEKVKGAIA-AAGEVGTVDEWGKRKLAYEIDKKYTEGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
YV + + + + + +++E +RS+ +
Sbjct: 60 YVVIEFKAEQSVLDSLDYLFKMNEEFIRSIIV 91
>gi|306834254|ref|ZP_07467373.1| 30S ribosomal protein S6 [Streptococcus bovis ATCC 700338]
gi|325979064|ref|YP_004288780.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304423603|gb|EFM26750.1| 30S ribosomal protein S6 [Streptococcus bovis ATCC 700338]
gi|325178992|emb|CBZ49036.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 96
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVETEDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|290999713|ref|XP_002682424.1| predicted protein [Naegleria gruberi]
gi|284096051|gb|EFC49680.1| predicted protein [Naegleria gruberi]
Length = 169
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR---- 56
M LYE V+L+ + + + + ++ EN G +R ++ +G+ +AY + ++R
Sbjct: 1 MPLYELVYLVNPKAALPTVAQVMKRNAQVVFENKGVIRRLDNMGILPLAYPMYRHREKHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
K +V M + P + E+ +MR D+ + R
Sbjct: 61 KGRWVMMLFDASPTCVKELNEQMRKDQQIFR 91
>gi|157149860|ref|YP_001451147.1| 30S ribosomal protein S6 [Streptococcus gordonii str. Challis
substr. CH1]
gi|189045592|sp|A8AZD7|RS6_STRGC RecName: Full=30S ribosomal protein S6
gi|157074654|gb|ABV09337.1| ribosomal protein S6 [Streptococcus gordonii str. Challis substr.
CH1]
gi|327458973|gb|EGF05321.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1057]
Length = 96
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKLDA 96
>gi|313889708|ref|ZP_07823351.1| ribosomal protein S6 [Streptococcus pseudoporcinus SPIN 20026]
gi|332523368|ref|ZP_08399620.1| ribosomal protein S6 [Streptococcus porcinus str. Jelinkova 176]
gi|313122005|gb|EFR45101.1| ribosomal protein S6 [Streptococcus pseudoporcinus SPIN 20026]
gi|332314632|gb|EGJ27617.1| ribosomal protein S6 [Streptococcus porcinus str. Jelinkova 176]
Length = 96
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESEEATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|329116870|ref|ZP_08245587.1| ribosomal protein S6 [Streptococcus parauberis NCFD 2020]
gi|326907275|gb|EGE54189.1| ribosomal protein S6 [Streptococcus parauberis NCFD 2020]
Length = 96
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILSDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|330813906|ref|YP_004358145.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
gi|327487001|gb|AEA81406.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
Length = 107
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 1 MKLYEHVFLLRQDI---SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M YEH ++ ++ SS IK+ I + ++++N ++ G+R++AY I+KN +
Sbjct: 1 MNYYEHTYITVPELNEESSNSIKEKI---EEILKKNDSKIVKEENWGVRSLAYSIKKNYR 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLTI 104
Y + I I E+++ R DE +++ L++ + E+ LT+
Sbjct: 58 GKYSNLYIEGNSKVIKELEKFERYDERIIKFLSMKIKKIPEEESGLTV 105
>gi|85057283|ref|YP_456199.1| 30S ribosomal protein S6 [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123518528|sp|Q2NKC3|RS6_AYWBP RecName: Full=30S ribosomal protein S6
gi|84789388|gb|ABC65120.1| SSU ribosomal protein S6P [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 95
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ ++ +K Q++ + ++ E+G++ + Y I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDNKYVKKINDTLQNVFLQAPNQILEQKEIGLKDLTYFIDNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + + A+ E R ++I E ++R + +
Sbjct: 61 NWLMVKADNDAVLEFNRIVKITEEIIRFIVI 91
>gi|320333136|ref|YP_004169847.1| 30S ribosomal protein S6 [Deinococcus maricopensis DSM 21211]
gi|319754425|gb|ADV66182.1| 30S ribosomal protein S6 [Deinococcus maricopensis DSM 21211]
Length = 103
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y+ +L +S++Q+ + + G E+ V+E G R +AY I K R+ YY+F
Sbjct: 5 YDLNLILNPSLSAEQLATEKTYIEGAVTNAGAELVNVDEAGNRRLAYSIEKEREGYYLFY 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
I + ++ +R+ +NV R L +
Sbjct: 65 TIKASGNPEKDIAASLRLRDNVRRVLVV 92
>gi|300859451|ref|YP_003784434.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686905|gb|ADK29827.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
FRC41]
gi|302207131|gb|ADL11473.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
C231]
gi|302331692|gb|ADL21886.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
1002]
gi|308277385|gb|ADO27284.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis I19]
Length = 95
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ A + E+ R + +++ VLR+ L
Sbjct: 61 AVLNLNCESATVLELDRVLNLNDGVLRTKVL 91
>gi|19554176|ref|NP_602178.1| 30S ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|62391830|ref|YP_227232.1| 30S ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|24212283|sp|Q8NLF9|RS6_CORGL RecName: Full=30S ribosomal protein S6
gi|21325756|dbj|BAC00377.1| Ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|41222977|emb|CAF18922.1| RIBOSOMAL PROTEIN S6 [Corynebacterium glutamicum ATCC 13032]
Length = 95
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPIDKKEEGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 61 AVVDLKCESATVLELDRVLNLNDGVLRTKVLRLD 94
>gi|153002999|ref|YP_001377324.1| ribosomal protein S6 [Anaeromyxobacter sp. Fw109-5]
gi|152026572|gb|ABS24340.1| ribosomal protein S6 [Anaeromyxobacter sp. Fw109-5]
Length = 150
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++LL+ + Q+++ + + ++ GG+V G R A+ + KN KA Y+
Sbjct: 11 YETIYLLKAETPDDQVEEIKERLRGVVTREGGKVIRFTNQGKRKTAFPVGKNPKALYMHC 70
Query: 64 NIASPPAAIHEMKRKMRIDENV--LRSLTLL----VDSHEQSPTLTIQRHD-----RDDR 112
P + E++R +++ + V +S+ L D+ + P + IQ + R++R
Sbjct: 71 LYIGQPGLVAELERNLKMIDQVSKFQSVRLAEGVDFDARQVEPDVKIQAVEDEPKPREER 130
Query: 113 NDRFPRD 119
+ P D
Sbjct: 131 GEFAPGD 137
>gi|34763884|ref|ZP_00144788.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237742687|ref|ZP_04573168.1| SSU ribosomal protein S6P [Fusobacterium sp. 4_1_13]
gi|256846082|ref|ZP_05551540.1| ribosomal protein S6 [Fusobacterium sp. 3_1_36A2]
gi|294784788|ref|ZP_06750076.1| ribosomal protein S6 [Fusobacterium sp. 3_1_27]
gi|27886347|gb|EAA23618.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430335|gb|EEO40547.1| SSU ribosomal protein S6P [Fusobacterium sp. 4_1_13]
gi|256719641|gb|EEU33196.1| ribosomal protein S6 [Fusobacterium sp. 3_1_36A2]
gi|294486502|gb|EFG33864.1| ribosomal protein S6 [Fusobacterium sp. 3_1_27]
Length = 105
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ I Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREELINQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 72 VLTTFEIDGTKLAEVESKLNIMESVMRYIVV 102
>gi|315320561|ref|YP_004072618.1| 30S ribosomal protein S6 [Thalassiosira oceanica CCMP1005]
gi|283569034|gb|ADB27571.1| 30S ribosomal protein S6 [Thalassiosira oceanica CCMP1005]
Length = 103
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K+ Y ++L + N E+ +++ G R +AY I ++ ++
Sbjct: 7 YEMMILLTEEFNDNELKNWAFNYAKALRKLNASEISVISR-GKRDLAYEISNQKRGNFIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P E ++ D NVLR L L
Sbjct: 66 INFSSIPKHAEEFLSSLKFDINVLRFLIL 94
>gi|241895862|ref|ZP_04783158.1| ribosomal protein S6 [Weissella paramesenteroides ATCC 33313]
gi|241870905|gb|EER74656.1| ribosomal protein S6 [Weissella paramesenteroides ATCC 33313]
Length = 99
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+++ K + ++ ++ +NG V + R Y I R+ Y +
Sbjct: 3 YELTYIIRPDMNADAKKALVERFDKVLSDNGATVVESKDWSSRRFTYEIAGYREGLYHIV 62
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N A AAI+E R +I E++LR + +
Sbjct: 63 NFTAEDDAAINEFDRLAKISEDILRHMVV 91
>gi|185535000|gb|ACC77846.1| 30S ribosomal protein S6 [Staphylococcus xylosus]
Length = 101
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKAVVERFNGILASQGSEVLEAKDWGKRRLAYEINDFSEGYY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I S A E +R +I ++V+R + +
Sbjct: 61 NIVRIQTSDNEATDEFQRLAKISDDVIRYIVI 92
>gi|170016527|ref|YP_001727446.1| ribosomal protein S6 [Leuconostoc citreum KM20]
gi|169803384|gb|ACA82002.1| Ribosomal protein S6 [Leuconostoc citreum KM20]
Length = 98
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDMEADAKKALVERFDGILTNNGATITKSADWATRRFAYEIAGYREGVYHVI 64
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N A AAI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDAAINEFDRLAKISQDILRHMIVKRDA 97
>gi|288817695|ref|YP_003432042.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|288787094|dbj|BAI68841.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|308751293|gb|ADO44776.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
Length = 110
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE VF+L+ ++ ++++ + + + IQ+ GG++ + G++ +AY I+ + Y++F
Sbjct: 12 YESVFVLKPTLTEEEVQRRLQEIRETIQKKGGQILQEEDWGIKKLAYPIKNFQHGRYFIF 71
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+S P + + +I ++++R L V E
Sbjct: 72 RITSSNPELPNHLDFYYKISDDIIRWLNFQVKVKE 106
>gi|254303427|ref|ZP_04970785.1| ribosomal protein S6 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323619|gb|EDK88869.1| ribosomal protein S6 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 94
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ I Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREELINQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 61 VLTTFEIDGTKLAEVESKLNIMESVMRYIVV 91
>gi|312864936|ref|ZP_07725166.1| ribosomal protein S6 [Streptococcus downei F0415]
gi|311099556|gb|EFQ57770.1| ribosomal protein S6 [Streptococcus downei F0415]
Length = 96
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ +++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVERFDAILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESQDAHALNEFDRLSKINNDILRHMIVKLDA 96
>gi|225869197|ref|YP_002745145.1| 30S ribosomal protein S6 [Streptococcus equi subsp.
zooepidemicus]
gi|225869849|ref|YP_002745796.1| 30S ribosomal protein S6 [Streptococcus equi subsp. equi 4047]
gi|254765454|sp|C0MB79|RS6_STRE4 RecName: Full=30S ribosomal protein S6
gi|259495344|sp|C0MEM1|RS6_STRS7 RecName: Full=30S ribosomal protein S6
gi|225699253|emb|CAW92564.1| 30S ribosomal protein S6 [Streptococcus equi subsp. equi 4047]
gi|225702473|emb|CAX00379.1| 30S ribosomal protein S6 [Streptococcus equi subsp.
zooepidemicus]
Length = 96
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|302786646|ref|XP_002975094.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
gi|302814601|ref|XP_002988984.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300143321|gb|EFJ10013.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300157253|gb|EFJ23879.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
Length = 112
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGG-EVRLVNELGMRTIAYRI-RKNRKA--- 58
YE + +LR DI+ +Q +Y+ +I GG +V + N G+ +AY I +KN +
Sbjct: 13 YETMAVLRPDITEEQRLALSQRYEEMIIAGGGMDVEIFNR-GIMPLAYGILKKNTRGEKN 71
Query: 59 ------YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+Y+F A+ P ++ E++RK+ D++++R T
Sbjct: 72 TYVDGIFYMF-TFATKPGSVKELQRKLETDDDIIRVTTF 109
>gi|227548534|ref|ZP_03978583.1| ribosomal protein S6 [Corynebacterium lipophiloflavum DSM 44291]
gi|227079363|gb|EEI17326.1| ribosomal protein S6 [Corynebacterium lipophiloflavum DSM 44291]
Length = 98
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y +
Sbjct: 7 YEVMIILDPQQDERTVAPSLDKFLETVRKDNGTVEKVDVWGKRRLAYPINKKEEGIYAVI 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N+ + E+ R + ++E VLR+ L D
Sbjct: 67 NLDCAAETVAELDRVLNLNEGVLRTKVLRTD 97
>gi|161598671|ref|NP_940593.2| 30S ribosomal protein S6 [Corynebacterium diphtheriae NCTC 13129]
gi|61215593|sp|Q6NEI3|RS6_CORDI RecName: Full=30S ribosomal protein S6
Length = 95
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ A + E+ R + ++++V+R+ L
Sbjct: 61 AVVNLTCESATVLELDRVLNLNDSVMRTKVL 91
>gi|224475520|ref|YP_002633126.1| 30S ribosomal protein S6 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254765453|sp|B9DIB8|RS6_STACT RecName: Full=30S ribosomal protein S6
gi|222420127|emb|CAL26941.1| 30S ribosomal protein S6 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 98
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ ++ +G E+ + G R +AY I ++ YY
Sbjct: 1 MRTYEIMYVVRPNIEDEARKALVERFNGILTNDGAEIIEEKDWGKRRLAYEIEDFKEGYY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ I + + A E +R +I+++++R + +
Sbjct: 61 YIVRINTENSEATDEFQRLAKINDDIIRYIVI 92
>gi|10835884|pdb|1CQM|A Chain A, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835885|pdb|1CQM|B Chain B, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835886|pdb|1CQN|A Chain A, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835887|pdb|1CQN|B Chain B, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization
Length = 101
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V LG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|257458036|ref|ZP_05623195.1| ribosomal protein S6 [Treponema vincentii ATCC 35580]
gi|257444749|gb|EEV19833.1| ribosomal protein S6 [Treponema vincentii ATCC 35580]
Length = 93
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
I Q K I +S++ + ++ + G R + Y I+K K YV NI + P I
Sbjct: 12 IEEAQFKPGIEDVRSVLGDFSVQIDSEDPFGDRELTYEIKKRTKGRYVLFNIHAEPDKII 71
Query: 74 EMKRKMRIDENVLRSLTLLVD 94
E+ K ++++N+L L + VD
Sbjct: 72 ELDHKFKLNQNLLTFLFIKVD 92
>gi|303242468|ref|ZP_07328949.1| ribosomal protein S6 [Acetivibrio cellulolyticus CD2]
gi|302589992|gb|EFL59759.1| ribosomal protein S6 [Acetivibrio cellulolyticus CD2]
Length = 95
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F++ +++ K I + + L+ E ++ ++E G R +AY I + YYV +
Sbjct: 5 YETIFIVSPEVNEDDTKAIIEKMKGLV-ETSAQLESIDEWGKRKLAYPINDFNEGYYVLI 63
Query: 64 NIASPPAAIHEMKR 77
N +S HE++R
Sbjct: 64 NFSSETNFPHELER 77
>gi|294787278|ref|ZP_06752531.1| ribosomal protein S6 [Parascardovia denticolens F0305]
gi|315227164|ref|ZP_07868951.1| 30S ribosomal protein S6 [Parascardovia denticolens DSM 10105]
gi|294484634|gb|EFG32269.1| ribosomal protein S6 [Parascardovia denticolens F0305]
gi|315119614|gb|EFT82747.1| 30S ribosomal protein S6 [Parascardovia denticolens DSM 10105]
Length = 98
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + ++ + +K + QY + G V ++ G R +AY I + Y +
Sbjct: 6 YELMLIADPELDDRALKKLVDQYLETVTNEKGTVDDIDIWGRRKLAYEIDGKNEGSYAVV 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + PA E+ R + ++E+++R+ L
Sbjct: 66 NYTAEPATSDELDRLLNLNESIIRTKIL 93
>gi|313888652|ref|ZP_07822317.1| ribosomal protein S6 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845381|gb|EFR32777.1| ribosomal protein S6 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 94
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + ++ ++ + + + +I E G++ ++E GM+ +AY I +AYY
Sbjct: 1 MNKYEAVIMFYPEVEEEKRNASFDRLKKVI-EKDGKINNIDEWGMKKLAYAIDYKNEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+F + I E+ R +I + V+R + + V+
Sbjct: 60 IFYEFETKAEDIVEINRVAKIMDPVMRQMIIKVE 93
>gi|262277394|ref|ZP_06055187.1| ribosomal protein S6 [alpha proteobacterium HIMB114]
gi|262224497|gb|EEY74956.1| ribosomal protein S6 [alpha proteobacterium HIMB114]
Length = 108
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/93 (18%), Positives = 53/93 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YEH ++ + + + +++ + + ++ ++ G++ + + G+R +AY I+KN K +Y
Sbjct: 1 MNIYEHTYIAAPEANKKDLENIEKRIEEILSKSSGKICKIEDWGLRNLAYPIKKNSKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + A+ ++ + ++ V++ L++ +
Sbjct: 61 RNLYLEGNNKAVRAIEEFEKFNDKVIKYLSMKI 93
>gi|225020028|ref|ZP_03709220.1| hypothetical protein CORMATOL_00024 [Corynebacterium matruchotii
ATCC 33806]
gi|224947163|gb|EEG28372.1| hypothetical protein CORMATOL_00024 [Corynebacterium matruchotii
ATCC 33806]
Length = 98
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + YV +
Sbjct: 7 YEVMIILDPIQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYVVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A + E R + ++++VLR+ L
Sbjct: 67 NLHCESATVQEFDRVLTLNDSVLRTKVL 94
>gi|73663682|ref|YP_302463.1| 30S ribosomal protein S6 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82581625|sp|Q49UQ0|RS6_STAS1 RecName: Full=30S ribosomal protein S6
gi|72496197|dbj|BAE19518.1| 30S ribosomal protein S6 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 101
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ +G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIIRPNIEEDAKKAVVERFNGILASHGSEVLEAKDWGKRRLAYEINDFSEGYY 60
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I ++V+R + +
Sbjct: 61 NIVRIQTADNEATDEFQRLAKISDDVIRYIVI 92
>gi|325971034|ref|YP_004247225.1| 30S ribosomal protein S6 [Spirochaeta sp. Buddy]
gi|324026272|gb|ADY13031.1| 30S ribosomal protein S6 [Spirochaeta sp. Buddy]
Length = 93
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 28 SLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
S G E+ +++G++ +AY I+K K +YV+ + + P+ I E +R ++ N+L+
Sbjct: 26 STFATAGVEITKQDDMGVKYLAYDIKKQEKGHYVYFELKADPSTILEFERGFLLNANILK 85
Query: 88 SL 89
L
Sbjct: 86 YL 87
>gi|125974672|ref|YP_001038582.1| SSU ribosomal protein S6P [Clostridium thermocellum ATCC 27405]
gi|256004129|ref|ZP_05429113.1| ribosomal protein S6 [Clostridium thermocellum DSM 2360]
gi|281418856|ref|ZP_06249875.1| ribosomal protein S6 [Clostridium thermocellum JW20]
gi|125714897|gb|ABN53389.1| SSU ribosomal protein S6P [Clostridium thermocellum ATCC 27405]
gi|255991877|gb|EEU01975.1| ribosomal protein S6 [Clostridium thermocellum DSM 2360]
gi|281407940|gb|EFB38199.1| ribosomal protein S6 [Clostridium thermocellum JW20]
gi|316941797|gb|ADU75831.1| ribosomal protein S6 [Clostridium thermocellum DSM 1313]
Length = 95
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F++ ++S ++ K + + + I E ++ ++E G R +AY I + YYV
Sbjct: 5 YETIFIINPELSEEETKALVEKIKGTI-EASAQLESIDEWGKRKLAYPIDHFNEGYYVLA 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N + E++R RI + +++ + +
Sbjct: 64 NFTADSNFPRELERIFRITDGIIKDIIV 91
>gi|266620040|ref|ZP_06112975.1| ribosomal protein S6 [Clostridium hathewayi DSM 13479]
gi|288868401|gb|EFD00700.1| ribosomal protein S6 [Clostridium hathewayi DSM 13479]
Length = 95
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLNVKLEDEERAAAIEKITNYITRFGGTVTNIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ +E++ ++RI E V+R L +
Sbjct: 61 YFIQFDGDSTTPNELESRVRIMEPVIRYLCV 91
>gi|319891323|ref|YP_004148198.1| SSU ribosomal protein S6p [Staphylococcus pseudintermedius
HKU10-03]
gi|317161019|gb|ADV04562.1| SSU ribosomal protein S6p [Staphylococcus pseudintermedius
HKU10-03]
gi|323465520|gb|ADX77673.1| ribosomal protein S6 [Staphylococcus pseudintermedius ED99]
Length = 98
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIVRPNIEEDARKAVVERFNGILASEGSEVLETKDWGKRRLAYEIEDFKDGYY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ I S A E +R +I+++++R + + D +
Sbjct: 61 NIVRIQSENNKATDEFQRLAKINDDIIRYIVVREDEN 97
>gi|291561868|emb|CBL40668.1| SSU ribosomal protein S6P [butyrate-producing bacterium SS3/4]
Length = 95
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + + + + + I GG + V+E G + +AY I+K+++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDDERAAALEKVKGYITRFGGNIVDVDEWGKKRLAYEIQKSKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFEGEANCPNEVEAHIRIMEPVVRYLCVRQDA 95
>gi|259047891|ref|ZP_05738292.1| 30S ribosomal protein S6 [Granulicatella adiacens ATCC 49175]
gi|259035568|gb|EEW36823.1| 30S ribosomal protein S6 [Granulicatella adiacens ATCC 49175]
Length = 99
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + + ++ +++ +NG V + R AY I+ ++ Y +
Sbjct: 7 YEILYIIRPNIDEAAKAELVARFDAVLTDNGAVVVESKDWAKRRFAYEIKDFQEGIYHLV 66
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
NI A AAI E R +I+ ++LR + +
Sbjct: 67 NITAEDAAAIDEFDRLAKINNDILRHMIV 95
>gi|326693084|ref|ZP_08230089.1| ribosomal protein S6 [Leuconostoc argentinum KCTC 3773]
Length = 98
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE +++R DI K + ++ ++ +NG + + R AY I R+ Y+V
Sbjct: 5 YELTYIVRPDIEMDAKKALVERFDGILTDNGATISKSADWATRRFAYEIAGYREGVYHVI 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
A AAI+E R +I +++LR + +
Sbjct: 65 DFTAEDDAAINEFDRLAKISQDILRHMIV 93
>gi|305681636|ref|ZP_07404442.1| ribosomal protein S6 [Corynebacterium matruchotii ATCC 14266]
gi|305658796|gb|EFM48297.1| ribosomal protein S6 [Corynebacterium matruchotii ATCC 14266]
Length = 99
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + YV +
Sbjct: 8 YEVMIILDPIQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYVVV 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A + E R + ++++VLR+ L
Sbjct: 68 NLHCESATVQEFDRVLTLNDSVLRTKVL 95
>gi|227432790|ref|ZP_03914753.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351459|gb|EEJ41722.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 98
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE +++R D+ + K + ++ +++ +NG ++ + R AY I R+ Y++
Sbjct: 5 YEMTYIVRPDLDADAKKTLVERFDAILTDNGATIQKSADWATRRFAYEIAGYREGTYHII 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
A AI+E R +I +++LR + + D+
Sbjct: 65 KFTAEDDKAINEFDRLAKISQDILRHMIVKRDA 97
>gi|19704978|ref|NP_602473.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329233|ref|ZP_06871734.1| 30S ribosomal protein S6 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19712882|gb|AAL93772.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296153589|gb|EFG94406.1| 30S ribosomal protein S6 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 105
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ + Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREELVNQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 72 VLTTFEIDGTKLAEVESKLNIMESVMRYIVV 102
>gi|24212294|sp|Q8RIE3|RS6_FUSNN RecName: Full=30S ribosomal protein S6
Length = 94
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ + Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREELVNQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E+V+R + +
Sbjct: 61 VLTTFEIDGTKLAEVESKLNIMESVMRYIVV 91
>gi|11467439|ref|NP_043585.1| ribosomal protein S6 [Odontella sinensis]
gi|1350897|sp|P49494|RR6_ODOSI RecName: Full=30S ribosomal protein S6, chloroplastic
gi|1185134|emb|CAA91617.1| 30S ribosomal protein S6 [Odontella sinensis]
Length = 96
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
K YE + LL ++ + ++K Y ++L + + E+ +++ G R ++Y I +K +
Sbjct: 5 KKYEMMILLTEEFNDSELKTWAFNYAKALRKLSASEISVISR-GKRDLSYYINNQKKGNF 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N +S P + + ++ D NVLR L L
Sbjct: 64 IQINFSSMPKYVDNFSKNLKFDSNVLRFLIL 94
>gi|24380220|ref|NP_722175.1| 30S ribosomal protein S6 [Streptococcus mutans UA159]
gi|290579805|ref|YP_003484197.1| 30S ribosomal protein S6 [Streptococcus mutans NN2025]
gi|32171545|sp|Q8DSD7|RS6_STRMU RecName: Full=30S ribosomal protein S6
gi|24378227|gb|AAN59481.1|AE015012_10 30S ribosomal protein S6 [Streptococcus mutans UA159]
gi|254996704|dbj|BAH87305.1| 30S ribosomal protein S6 [Streptococcus mutans NN2025]
Length = 96
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ +++ +NG + + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDAVLTDNGATIVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVETEDAHALNEFDRLSKINNDILRHMIVKLDA 96
>gi|259508442|ref|ZP_05751342.1| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
gi|259163996|gb|EEW48550.1| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
Length = 98
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y +
Sbjct: 7 YELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIYAVI 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ A + E+ R + +++ VLR+ L +D
Sbjct: 67 DLKCESATVLELDRVLNLNDGVLRTKVLRLD 97
>gi|309798593|ref|ZP_07692868.1| ribosomal protein S6 [Streptococcus infantis SK1302]
gi|308117829|gb|EFO55230.1| ribosomal protein S6 [Streptococcus infantis SK1302]
Length = 96
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKLDA 96
>gi|302384672|ref|YP_003820494.1| ribosomal protein S6 [Clostridium saccharolyticum WM1]
gi|302195300|gb|ADL02871.1| ribosomal protein S6 [Clostridium saccharolyticum WM1]
Length = 95
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLNVKLEDEERAAAIEKVTGYITRFGGTVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ +E++ +RI E V+R L +
Sbjct: 61 YFIKFDGDSTTPNELEAHVRIMEPVIRYLCV 91
>gi|261749386|ref|YP_003257071.1| 30S ribosomal protein S6 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497478|gb|ACX83928.1| 30S ribosomal protein S6 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 116
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE++ ++ +S Q K T +Y++ + + G++ G++ +AY I+K + Y
Sbjct: 5 YENIMIITPILSDDQAKKTAKEYENYLIQKNGKIVHQEHWGLKKLAYPIQKKQSGCYHLF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +++ K+R DE +LR +T+
Sbjct: 65 EFLLSSNLVSDLELKLRQDERILRFITV 92
>gi|253581021|ref|ZP_04858282.1| 30S ribosomal protein S6 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847684|gb|EES75653.1| 30S ribosomal protein S6 [Ruminococcus sp. 5_1_39BFAA]
Length = 110
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + + I G + V E G + +AY I+K + +Y
Sbjct: 16 MNKYELALVVSAKVEDEVRDAVVEKAKGYITRYNGTITEVEEWGKKKLAYEIQKMHEGFY 75
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 76 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 110
>gi|23494664|dbj|BAC19630.1| putative 30S ribosomal protein S6 [Corynebacterium efficiens
YS-314]
Length = 99
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y +
Sbjct: 8 YELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIYAVI 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ A + E+ R + +++ VLR+ L +D
Sbjct: 68 DLKCESATVLELDRVLNLNDGVLRTKVLRLD 98
>gi|69246712|ref|ZP_00604080.1| Ribosomal protein S6 [Enterococcus faecium DO]
gi|227550646|ref|ZP_03980695.1| ribosomal protein S6 [Enterococcus faecium TX1330]
gi|257878652|ref|ZP_05658305.1| ribosomal protein S6 [Enterococcus faecium 1,230,933]
gi|257881318|ref|ZP_05660971.1| ribosomal protein S6 [Enterococcus faecium 1,231,502]
gi|257885593|ref|ZP_05665246.1| ribosomal protein S6 [Enterococcus faecium 1,231,501]
gi|257888089|ref|ZP_05667742.1| ribosomal protein S6 [Enterococcus faecium 1,141,733]
gi|257890535|ref|ZP_05670188.1| ribosomal protein S6 [Enterococcus faecium 1,231,410]
gi|257893110|ref|ZP_05672763.1| ribosomal protein S6 [Enterococcus faecium 1,231,408]
gi|257896293|ref|ZP_05675946.1| ribosomal protein S6 [Enterococcus faecium Com12]
gi|258615264|ref|ZP_05713034.1| 30S ribosomal protein S6 [Enterococcus faecium DO]
gi|260558233|ref|ZP_05830429.1| ribosomal protein S6 [Enterococcus faecium C68]
gi|261206923|ref|ZP_05921612.1| ribosomal protein S6 [Enterococcus faecium TC 6]
gi|289566500|ref|ZP_06446924.1| 30S ribosomal protein S6 [Enterococcus faecium D344SRF]
gi|293379374|ref|ZP_06625518.1| ribosomal protein S6 [Enterococcus faecium PC4.1]
gi|293563257|ref|ZP_06677709.1| ribosomal protein S6 [Enterococcus faecium E1162]
gi|293569153|ref|ZP_06680459.1| ribosomal protein S6 [Enterococcus faecium E1071]
gi|294616653|ref|ZP_06696424.1| ribosomal protein S6 [Enterococcus faecium E1636]
gi|294619751|ref|ZP_06699156.1| ribosomal protein S6 [Enterococcus faecium E1679]
gi|294623765|ref|ZP_06702593.1| ribosomal protein S6 [Enterococcus faecium U0317]
gi|314940125|ref|ZP_07847305.1| ribosomal protein S6 [Enterococcus faecium TX0133a04]
gi|314943044|ref|ZP_07849848.1| ribosomal protein S6 [Enterococcus faecium TX0133C]
gi|314948162|ref|ZP_07851558.1| ribosomal protein S6 [Enterococcus faecium TX0082]
gi|314953424|ref|ZP_07856342.1| ribosomal protein S6 [Enterococcus faecium TX0133A]
gi|314993837|ref|ZP_07859173.1| ribosomal protein S6 [Enterococcus faecium TX0133B]
gi|314998138|ref|ZP_07863020.1| ribosomal protein S6 [Enterococcus faecium TX0133a01]
gi|68195126|gb|EAN09585.1| Ribosomal protein S6 [Enterococcus faecium DO]
gi|227180212|gb|EEI61184.1| ribosomal protein S6 [Enterococcus faecium TX1330]
gi|257812880|gb|EEV41638.1| ribosomal protein S6 [Enterococcus faecium 1,230,933]
gi|257816976|gb|EEV44304.1| ribosomal protein S6 [Enterococcus faecium 1,231,502]
gi|257821449|gb|EEV48579.1| ribosomal protein S6 [Enterococcus faecium 1,231,501]
gi|257824143|gb|EEV51075.1| ribosomal protein S6 [Enterococcus faecium 1,141,733]
gi|257826895|gb|EEV53521.1| ribosomal protein S6 [Enterococcus faecium 1,231,410]
gi|257829489|gb|EEV56096.1| ribosomal protein S6 [Enterococcus faecium 1,231,408]
gi|257832858|gb|EEV59279.1| ribosomal protein S6 [Enterococcus faecium Com12]
gi|260075407|gb|EEW63713.1| ribosomal protein S6 [Enterococcus faecium C68]
gi|260078551|gb|EEW66253.1| ribosomal protein S6 [Enterococcus faecium TC 6]
gi|289161709|gb|EFD09585.1| 30S ribosomal protein S6 [Enterococcus faecium D344SRF]
gi|291588122|gb|EFF19964.1| ribosomal protein S6 [Enterococcus faecium E1071]
gi|291590473|gb|EFF22211.1| ribosomal protein S6 [Enterococcus faecium E1636]
gi|291594021|gb|EFF25490.1| ribosomal protein S6 [Enterococcus faecium E1679]
gi|291596719|gb|EFF27942.1| ribosomal protein S6 [Enterococcus faecium U0317]
gi|291604796|gb|EFF34278.1| ribosomal protein S6 [Enterococcus faecium E1162]
gi|292641897|gb|EFF60063.1| ribosomal protein S6 [Enterococcus faecium PC4.1]
gi|313587850|gb|EFR66695.1| ribosomal protein S6 [Enterococcus faecium TX0133a01]
gi|313591728|gb|EFR70573.1| ribosomal protein S6 [Enterococcus faecium TX0133B]
gi|313594527|gb|EFR73372.1| ribosomal protein S6 [Enterococcus faecium TX0133A]
gi|313598244|gb|EFR77089.1| ribosomal protein S6 [Enterococcus faecium TX0133C]
gi|313640630|gb|EFS05210.1| ribosomal protein S6 [Enterococcus faecium TX0133a04]
gi|313645416|gb|EFS09996.1| ribosomal protein S6 [Enterococcus faecium TX0082]
Length = 99
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + I ++ +++++NG EV + R AY + R+ Y +
Sbjct: 6 YEIMYIIRPNIDEEAKTALIERFDAILKDNGAEVIESKDWEKRRFAYEMNGYREGIYHIV 65
Query: 64 NIASPPA--AIHEMKRKMRIDENVLRSLTL 91
++SP + A++E R +I+++++R + +
Sbjct: 66 KVSSPSSANAVNEFDRLAKINDDIIRHMIV 95
>gi|194398723|ref|YP_002038173.1| 30S ribosomal protein S6 [Streptococcus pneumoniae G54]
gi|226695289|sp|B5E6A6|RS6_STRP4 RecName: Full=30S ribosomal protein S6
gi|194358390|gb|ACF56838.1| 30S ribosomal protein S6 [Streptococcus pneumoniae G54]
Length = 96
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + A+ AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVXVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|160947596|ref|ZP_02094763.1| hypothetical protein PEPMIC_01531 [Parvimonas micra ATCC 33270]
gi|158446730|gb|EDP23725.1| hypothetical protein PEPMIC_01531 [Parvimonas micra ATCC 33270]
Length = 94
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+ + ++ + + ++ I+ NG + +NE G R +AY I ++ YY
Sbjct: 1 MRKYEGVFIFKPNLEDEVRNQAFDRIKAAIESNG-TITEINEWGNRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +N + + E++R+ RI + ++R + +
Sbjct: 60 IIVNFEAAAEVVAEVERRSRISDAIIRYMVV 90
>gi|145296972|ref|YP_001139793.1| 30S ribosomal protein S6 [Corynebacterium glutamicum R]
gi|140846892|dbj|BAF55891.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 98
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y +
Sbjct: 7 YELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPIDKKEEGVYAVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ A + E+ R + +++ VLR+ L +D
Sbjct: 67 DLKCESATVLELDRVLNLNDGVLRTKVLRLD 97
>gi|295108215|emb|CBL22168.1| SSU ribosomal protein S6P [Ruminococcus obeum A2-162]
Length = 95
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + + I G V V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVSAKVEDEVRDAVVEKAKGYIARYNGNVTEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|22537853|ref|NP_688704.1| 30S ribosomal protein S6 [Streptococcus agalactiae 2603V/R]
gi|25011798|ref|NP_736193.1| 30S ribosomal protein S6 [Streptococcus agalactiae NEM316]
gi|76788641|ref|YP_330323.1| 30S ribosomal protein S6 [Streptococcus agalactiae A909]
gi|76798958|ref|ZP_00781159.1| ribosomal protein S6 [Streptococcus agalactiae 18RS21]
gi|77406980|ref|ZP_00783996.1| ribosomal protein S6 [Streptococcus agalactiae H36B]
gi|77412640|ref|ZP_00788916.1| ribosomal protein S6 [Streptococcus agalactiae CJB111]
gi|77413667|ref|ZP_00789851.1| ribosomal protein S6 [Streptococcus agalactiae 515]
gi|54039534|sp|P66598|RS6_STRA5 RecName: Full=30S ribosomal protein S6
gi|54041977|sp|P66597|RS6_STRA3 RecName: Full=30S ribosomal protein S6
gi|91207793|sp|Q3JZI0|RS6_STRA1 RecName: Full=30S ribosomal protein S6
gi|22534748|gb|AAN00577.1|AE014269_21 ribosomal protein S6 [Streptococcus agalactiae 2603V/R]
gi|24413339|emb|CAD47418.1| 30S ribosomal protein S6 [Streptococcus agalactiae NEM316]
gi|76563698|gb|ABA46282.1| ribosomal protein S6 [Streptococcus agalactiae A909]
gi|76585679|gb|EAO62236.1| ribosomal protein S6 [Streptococcus agalactiae 18RS21]
gi|77160267|gb|EAO71394.1| ribosomal protein S6 [Streptococcus agalactiae 515]
gi|77161312|gb|EAO72347.1| ribosomal protein S6 [Streptococcus agalactiae CJB111]
gi|77174404|gb|EAO77257.1| ribosomal protein S6 [Streptococcus agalactiae H36B]
gi|319745680|gb|EFV97979.1| 30S ribosomal protein S6 [Streptococcus agalactiae ATCC 13813]
Length = 95
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ + Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILSDNGATVVESKDWEKRRLAYEIQDFTEGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N+ A A++E R +I+ ++LR + + VD
Sbjct: 61 HIVNVEAEDAVALNEFDRLSKINGDILRHMIVKVD 95
>gi|296111017|ref|YP_003621398.1| ribosomal protein S6 [Leuconostoc kimchii IMSNU 11154]
gi|295832548|gb|ADG40429.1| ribosomal protein S6 [Leuconostoc kimchii IMSNU 11154]
Length = 98
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ S K + ++ ++ NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLESDAKKALVERFDGILTNNGATITKSADWATRRFAYEIAGYREGVYHII 64
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N A AI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDNAINEFDRLAKISQDILRHMIVKRDA 97
>gi|195977487|ref|YP_002122731.1| 30S ribosomal protein S6 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|226695287|sp|B4U151|RS6_STREM RecName: Full=30S ribosomal protein S6
gi|195974192|gb|ACG61718.1| 30S ribosomal protein S6 RpsF [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 96
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTNNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|260584269|ref|ZP_05852016.1| 30S ribosomal protein S6 [Granulicatella elegans ATCC 700633]
gi|260157787|gb|EEW92856.1| 30S ribosomal protein S6 [Granulicatella elegans ATCC 700633]
Length = 101
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + + ++ +++ +NG V + R AY I+ + Y +
Sbjct: 7 YEILYIIRPNIDEAAKAELVARFDAVLADNGAVVVESKDWAKRRFAYEIKDFHEGIYHLV 66
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
NI + A AI E R +I ++LR + + V++
Sbjct: 67 NITAEDAKAIDEFDRLAKISNDILRHMVVKVEA 99
>gi|228476958|ref|ZP_04061596.1| ribosomal protein S6 [Streptococcus salivarius SK126]
gi|322373708|ref|ZP_08048244.1| ribosomal protein S6 [Streptococcus sp. C150]
gi|228250977|gb|EEK10148.1| ribosomal protein S6 [Streptococcus salivarius SK126]
gi|321278750|gb|EFX55819.1| ribosomal protein S6 [Streptococcus sp. C150]
Length = 96
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVESDNDFALNEFDRLSKINGDILRHMIVKLDA 96
>gi|116490136|ref|YP_809664.1| ribosomal protein S6 [Oenococcus oeni PSU-1]
gi|118587502|ref|ZP_01544927.1| 30S ribosomal protein S6 [Oenococcus oeni ATCC BAA-1163]
gi|290889530|ref|ZP_06552620.1| hypothetical protein AWRIB429_0010 [Oenococcus oeni AWRIB429]
gi|122277673|sp|Q04HQ7|RS6_OENOB RecName: Full=30S ribosomal protein S6
gi|116090861|gb|ABJ56015.1| SSU ribosomal protein S6P [Oenococcus oeni PSU-1]
gi|118432152|gb|EAV38893.1| 30S ribosomal protein S6 [Oenococcus oeni ATCC BAA-1163]
gi|290480728|gb|EFD89362.1| hypothetical protein AWRIB429_0010 [Oenococcus oeni AWRIB429]
Length = 146
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++R D+ + ++ S++ +NG ++ + R AY I R+ Y
Sbjct: 1 MANYELTYIVRPDLDKDAKAALVTRFDSILSDNGAKIDKSEDWDTRRFAYEINNYRQGTY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +S A++E R +I ++LR + + VD
Sbjct: 61 HIVTFSSEDEKAVNEFDRLAKISGDILRHMIVAVD 95
>gi|199598221|ref|ZP_03211642.1| Ribosomal protein S6 [Lactobacillus rhamnosus HN001]
gi|229551092|ref|ZP_04439817.1| ribosomal protein S6 [Lactobacillus rhamnosus LMS2-1]
gi|258507006|ref|YP_003169757.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus GG]
gi|258538203|ref|YP_003172702.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus Lc 705]
gi|199590824|gb|EDY98909.1| Ribosomal protein S6 [Lactobacillus rhamnosus HN001]
gi|229315553|gb|EEN81526.1| ribosomal protein S6 [Lactobacillus rhamnosus LMS2-1]
gi|257146933|emb|CAR85906.1| SSU/30S ribosomal protein S6P [Lactobacillus rhamnosus GG]
gi|257149879|emb|CAR88851.1| SSU/30S ribosomal protein S6P [Lactobacillus rhamnosus Lc 705]
gi|259648375|dbj|BAI40537.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus GG]
Length = 98
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y +
Sbjct: 6 YEVTYIIRPDLDEAAKTELVERFDNILKENGASIIDSKDWQKRKLAYEINKYNEGLYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A AI+E R +I+ ++LR + +
Sbjct: 66 NLSAEDDKAINEFDRLAKINNDILRHMIV 94
>gi|289523471|ref|ZP_06440325.1| ribosomal protein S6 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503163|gb|EFD24327.1| ribosomal protein S6 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 88
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 17 QQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMK 76
+++K + + +I+ GGE + G R +AY + K + YY + P+ I E+
Sbjct: 9 EEVKAQVDEISEVIKGLGGEFHKSDIWGKRRLAYPVEKQVEGYYALIEFDLEPSQIGEVD 68
Query: 77 RKMRIDENVLRSLTLLVD 94
R +++ + VLR L + +D
Sbjct: 69 RLLKLRDQVLRHLIVRLD 86
>gi|38201090|emb|CAE50814.1| 30S ribosomal protein S6 [Corynebacterium diphtheriae]
Length = 98
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y +
Sbjct: 7 YEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYAVV 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A + E+ R + ++++V+R+ L
Sbjct: 67 NLTCESATVLELDRVLNLNDSVMRTKVL 94
>gi|197120546|ref|YP_002132497.1| ribosomal protein S6 [Anaeromyxobacter sp. K]
gi|220915257|ref|YP_002490561.1| ribosomal protein S6 [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170395|gb|ACG71368.1| ribosomal protein S6 [Anaeromyxobacter sp. K]
gi|219953111|gb|ACL63495.1| ribosomal protein S6 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 148
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV-RLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++LL+ + +Q+ + + + ++ GG+V R N+ G R A+ + KN KA Y+
Sbjct: 11 YETIYLLKAETPDEQVDEIKERLRGVVSRQGGKVIRFTNQ-GKRKTAFPVAKNAKALYMH 69
Query: 63 MNIASPPAAIHEMKRKMRI 81
P + E++R +++
Sbjct: 70 CLYVGKPGLVTELERNLKM 88
>gi|291059479|gb|ADD72214.1| ribosomal protein S6 [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 87
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 27 QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVL 86
++L+QEN + + +G R +AY ++K ++ Y+ + P + E+ K+R+ ++L
Sbjct: 19 RALLQENDAVIAREDHIGERELAYPLKKQKRGRYLLFIVQCEPGKVRELDHKLRLRHDLL 78
Query: 87 RSLTLLVDS 95
L + VDS
Sbjct: 79 THLFVRVDS 87
>gi|257899277|ref|ZP_05678930.1| ribosomal protein S6 [Enterococcus faecium Com15]
gi|293557085|ref|ZP_06675643.1| ribosomal protein S6 [Enterococcus faecium E1039]
gi|293572724|ref|ZP_06683688.1| ribosomal protein S6 [Enterococcus faecium E980]
gi|257837189|gb|EEV62263.1| ribosomal protein S6 [Enterococcus faecium Com15]
gi|291600748|gb|EFF31042.1| ribosomal protein S6 [Enterococcus faecium E1039]
gi|291607216|gb|EFF36574.1| ribosomal protein S6 [Enterococcus faecium E980]
Length = 99
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + I ++ +++++NG EV + R AY + R+ Y +
Sbjct: 6 YEIMYIIRPNIDEEAKTALIERFDAILKDNGAEVIESKDWEKRRFAYEMNGYREGIYHIV 65
Query: 64 NIASPPA--AIHEMKRKMRIDENVLRSLTL 91
++SP + A+ E R +I+++++R + +
Sbjct: 66 KVSSPSSANAVSEFDRLAKINDDIIRHMIV 95
>gi|291532584|emb|CBL05697.1| SSU ribosomal protein S6P [Megamonas hypermegale ART12/1]
Length = 83
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRID 82
I ++ +LI NGG + + G + +AY I+ +Y + P E+ R M+I
Sbjct: 10 IEKFSNLIVANGGTIDKEDRWGKKRLAYEIKDCTDGFYCLFEYTAEPTCSAELDRVMKIT 69
Query: 83 ENVLRSLTL 91
+ VL+ + +
Sbjct: 70 DEVLKHMIV 78
>gi|257783832|ref|YP_003179049.1| 30S ribosomal protein S6 [Atopobium parvulum DSM 20469]
gi|257472339|gb|ACV50458.1| ribosomal protein S6 [Atopobium parvulum DSM 20469]
Length = 97
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + I +GG V V + G R +A+ I + Y
Sbjct: 1 MKAYELLFFVDPASTEEVRAGVMKRIDVAITADGGVVDSVEDWGKRKLAFEIDDLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P I E+ R +RI++ V R + +
Sbjct: 61 TLINFHADPTQIAELDRVLRINDAVKRHMIV 91
>gi|171910047|ref|ZP_02925517.1| 30S ribosomal protein S6 [Verrucomicrobium spinosum DSM 4136]
Length = 94
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + ++ + Q ++NG ++ V+ LG + Y R YY+
Sbjct: 5 YEAMIVLDMKGKEENVETLVSQLGREFEQNGAKLEQVDNLGKKKFPYAPRHVESGYYINF 64
Query: 64 NIASPPAAIHEMKRKMRIDENV 85
+ + P AI+ ++ K++++EN+
Sbjct: 65 HFEAAPEAINGLQTKLKLNENI 86
>gi|213582066|ref|ZP_03363892.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 85
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 48 IAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQ 105
+AY I K KA+YV MN+ +P I E++ R ++ V+RS+ + E SP +
Sbjct: 1 MAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP-MVKA 59
Query: 106 RHDRDDRNDRFPRDRNVDRKQHVSEE 131
+ +R +R D F + D + SEE
Sbjct: 60 KDERRERRDDFANETADDAEAGDSEE 85
>gi|168335181|ref|ZP_02693286.1| ribosomal protein S6 [Epulopiscium sp. 'N.t. morphotype B']
Length = 58
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 40 VNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V++ G + +AY I K ++ +Y F+ + P A E++ ++RI E VLR L +
Sbjct: 2 VDDWGKKKLAYEIDKKKEGFYYFIEFNAEPDAPAEIESRLRITEAVLRYLIV 53
>gi|15639057|ref|NP_218503.1| 30S ribosomal protein S6 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025297|ref|YP_001933069.1| 30S ribosomal protein S6 [Treponema pallidum subsp. pallidum
SS14]
gi|6094191|sp|O83102|RS6_TREPA RecName: Full=30S ribosomal protein S6
gi|226703877|sp|B2S211|RS6_TREPS RecName: Full=30S ribosomal protein S6
gi|3322321|gb|AAC65058.1| ribosomal protein S6 (rpsF) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017872|gb|ACD70490.1| ribosomal protein S6 [Treponema pallidum subsp. pallidum SS14]
Length = 93
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 27 QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVL 86
++L+QEN + + +G R +AY ++K ++ Y+ + P + E+ K+R+ ++L
Sbjct: 25 RALLQENDAVIAREDHIGERELAYPLKKQKRGRYLLFIVQCEPGKVRELDHKLRLRHDLL 84
Query: 87 RSLTLLVDS 95
L + VDS
Sbjct: 85 THLFVRVDS 93
>gi|261366669|ref|ZP_05979552.1| ribosomal protein S6 [Subdoligranulum variabile DSM 15176]
gi|282571490|gb|EFB77025.1| ribosomal protein S6 [Subdoligranulum variabile DSM 15176]
Length = 94
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + ++ + I ++++LI NG + V++ G + +AY I + Y
Sbjct: 1 MAKYETMMVTTANLDEEASAALINKFKNLIAANG-TIDSVDDWGKKRLAYPINDETEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ S P E+ R +I E VLRS+ +
Sbjct: 60 TVIKFTSEPDFPAELDRVYKITEGVLRSMII 90
>gi|238925609|ref|YP_002939126.1| 30S ribosomal protein S6 [Eubacterium rectale ATCC 33656]
gi|238877285|gb|ACR76992.1| 30S ribosomal protein S6 [Eubacterium rectale ATCC 33656]
Length = 107
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 12 MNKYELALVVSAKIEDDARTAVVEKAKEYITRAGGTVTEVEEAGKKRLAYEIQHMTEAFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + E+++ +RI +NVLR L +
Sbjct: 72 YFIQFDAEGTVPAEIEQDVRIMDNVLRFLCV 102
>gi|86743197|ref|YP_483597.1| 30S ribosomal protein S6 [Frankia sp. CcI3]
gi|86570059|gb|ABD13868.1| SSU ribosomal protein S6P [Frankia sp. CcI3]
Length = 108
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 51/85 (60%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L D+ + + ++ QY ++++ GG V V+ G R +AY I K+ + Y +
Sbjct: 5 YELMVILDADLEERTVAPSLDQYLGVVRQGGGVVEKVDVWGRRRLAYEIAKSHEGIYAVI 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRS 88
++ + P + E+ R++ ++E+V+R+
Sbjct: 65 DLHAEPDVVAELDRQLVLNESVMRT 89
>gi|206895807|ref|YP_002246971.1| ribosomal protein S6 [Coprothermobacter proteolyticus DSM 5265]
gi|206738424|gb|ACI17502.1| ribosomal protein S6 [Coprothermobacter proteolyticus DSM 5265]
Length = 94
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+Q G+V ++ G+R +AY I K +AYY I P + E + +++DE +LR +
Sbjct: 30 VQSYQGQVTKLDPWGLRRLAYPIEKRTQAYYSVFQIELPVENLDEFSQDLKVDERILRFM 89
>gi|226354822|ref|YP_002784562.1| 30S ribosomal protein S6 [Deinococcus deserti VCD115]
gi|259495329|sp|C1CXK2|RS6_DEIDV RecName: Full=30S ribosomal protein S6
gi|226316812|gb|ACO44808.1| putative 30S ribosomal protein S6 [Deinococcus deserti VCD115]
Length = 102
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++S++Q++ ++ ++ G EV +++LG R +AY++ K+R+ YY
Sbjct: 1 MNQYDLNLILNPNLSAEQVQIEKDYIETALKNVGAEVSNLDDLGNRRLAYQVGKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ I + ++ +R+ ++V R L +
Sbjct: 61 LMYTIKAGGNPEKDIASSLRLRDHVRRVLVV 91
>gi|116493583|ref|YP_805317.1| 30S ribosomal protein S6 [Lactobacillus casei ATCC 334]
gi|191636833|ref|YP_001985999.1| 30S ribosomal protein S6 [Lactobacillus casei BL23]
gi|227533497|ref|ZP_03963546.1| ribosomal protein S6 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239630814|ref|ZP_04673845.1| 30S ribosomal protein S6 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301065137|ref|YP_003787160.1| 30S ribosomal protein L6 [Lactobacillus casei str. Zhang]
gi|122264954|sp|Q03D47|RS6_LACC3 RecName: Full=30S ribosomal protein S6
gi|226703479|sp|B3W6R4|RS6_LACCB RecName: Full=30S ribosomal protein S6
gi|116103733|gb|ABJ68875.1| SSU ribosomal protein S6P [Lactobacillus casei ATCC 334]
gi|190711135|emb|CAQ65141.1| 30S ribosomal protein S6 [Lactobacillus casei BL23]
gi|227188826|gb|EEI68893.1| ribosomal protein S6 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239527097|gb|EEQ66098.1| 30S ribosomal protein S6 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300437544|gb|ADK17310.1| Ribosomal protein S6 [Lactobacillus casei str. Zhang]
gi|327380872|gb|AEA52348.1| 30S ribosomal protein S6 [Lactobacillus casei LC2W]
gi|327384036|gb|AEA55510.1| 30S ribosomal protein S6 [Lactobacillus casei BD-II]
Length = 98
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y +
Sbjct: 6 YEVTYIIRPDLDDAAKTELVERFDNILKENGANIIDSKDWQKRKLAYEINKYNEGLYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A AI+E R +I+ ++LR + +
Sbjct: 66 NLSAEDDKAINEFDRLGKINNDILRHMIV 94
>gi|328464625|gb|EGF35983.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus MTCC 5462]
Length = 95
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y +
Sbjct: 6 YEVTYIIRPDLDEAAKTELVERFDNILKENGASIIDSKDWQKRKLAYEINKYNEGLYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A AI+E R +I+ ++LR + +
Sbjct: 66 NLSAEDDKAINEFDRLAKINNDILRHMIV 94
>gi|163790925|ref|ZP_02185348.1| ribosomal protein S6 [Carnobacterium sp. AT7]
gi|159873767|gb|EDP67848.1| ribosomal protein S6 [Carnobacterium sp. AT7]
Length = 99
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE ++++R +I + + ++ +++++NG E+ + R AY I+ + Y++
Sbjct: 7 YEILYIIRPNIEEAEKTALVERFDTILKDNGAEITESKDWSKRRFAYEIKDFHEGIYHIV 66
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
A+ AI+E R +I ++LR +T+
Sbjct: 67 KLTANDAVAINEFDRLSKISPDILRHMTI 95
>gi|86156547|ref|YP_463332.1| SSU ribosomal protein S6P [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773058|gb|ABC79895.1| SSU ribosomal protein S6P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 148
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV-RLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++LL+ + +Q+ + + + ++ GG+V R N+ G R A+ + KN KA Y+
Sbjct: 11 YETIYLLKSETPDEQVDEIKERLRGVVSRQGGKVIRFTNQ-GKRKTAFPVAKNAKALYMH 69
Query: 63 MNIASPPAAIHEMKRKMRI 81
P + E++R +++
Sbjct: 70 CLYIGKPGLVTELERNLKM 88
>gi|28376981|ref|NP_783873.1| 30S ribosomal protein S6 [Lactobacillus plantarum WCFS1]
gi|254555176|ref|YP_003061593.1| 30S ribosomal protein S6 [Lactobacillus plantarum JDM1]
gi|300769112|ref|ZP_07079001.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179198|ref|YP_003923326.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|32171524|sp|Q890K2|RS6_LACPL RecName: Full=30S ribosomal protein S6
gi|28269812|emb|CAD62709.1| ribosomal protein S6 [Lactobacillus plantarum WCFS1]
gi|254044103|gb|ACT60896.1| 30S ribosomal protein S6 [Lactobacillus plantarum JDM1]
gi|300493352|gb|EFK28531.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308044689|gb|ADN97232.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 99
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYY 60
K YE +++R DI + ++ ++ +NG +V + R AY I N Y+
Sbjct: 5 KKYEITYIVRPDIDDAAKTALVDRFDKILTDNGAQVIDSKDWSKRRFAYEIGGFNEGTYH 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ A+ AA++E R +I++++LR + +
Sbjct: 65 IVNLTATDDAALNEFDRLSKINDDILRHMIV 95
>gi|291524155|emb|CBK89742.1| SSU ribosomal protein S6P [Eubacterium rectale DSM 17629]
gi|291527802|emb|CBK93388.1| SSU ribosomal protein S6P [Eubacterium rectale M104/1]
Length = 96
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 1 MNKYELALVVSAKIEDDARTAVVEKAKEYITRAGGTVTEVEEAGKKRLAYEIQHMTEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + E+++ +RI +NVLR L +
Sbjct: 61 YFIQFDAEGTVPAEIEQDVRIMDNVLRFLCV 91
>gi|146321680|ref|YP_001201391.1| 30S ribosomal protein S6 [Streptococcus suis 98HAH33]
gi|253752499|ref|YP_003025640.1| 30S ribosomal protein S6 [Streptococcus suis SC84]
gi|253754325|ref|YP_003027466.1| 30S ribosomal protein S6 [Streptococcus suis P1/7]
gi|253756259|ref|YP_003029399.1| 30S ribosomal protein S6 [Streptococcus suis BM407]
gi|330833441|ref|YP_004402266.1| 30S ribosomal protein S6 [Streptococcus suis ST3]
gi|166227393|sp|A4W3Q2|RS6_STRS2 RecName: Full=30S ribosomal protein S6
gi|145692486|gb|ABP92991.1| Ribosomal protein S6 [Streptococcus suis 98HAH33]
gi|251816788|emb|CAZ52431.1| 30S ribosomal protein S6 [Streptococcus suis SC84]
gi|251818723|emb|CAZ56559.1| 30S ribosomal protein S6 [Streptococcus suis BM407]
gi|251820571|emb|CAR47327.1| 30S ribosomal protein S6 [Streptococcus suis P1/7]
gi|292559105|gb|ADE32106.1| Ribosomal protein S6 [Streptococcus suis GZ1]
gi|319758907|gb|ADV70849.1| 30S ribosomal protein S6 [Streptococcus suis JS14]
gi|329307664|gb|AEB82080.1| 30S ribosomal protein S6 [Streptococcus suis ST3]
Length = 96
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA 96
>gi|256389567|ref|YP_003111131.1| 30S ribosomal protein S6 [Catenulispora acidiphila DSM 44928]
gi|256355793|gb|ACU69290.1| ribosomal protein S6 [Catenulispora acidiphila DSM 44928]
Length = 101
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RKN 55
M+ YE + +L D+ + I + + +I++ GG + + G R +AY I +K
Sbjct: 1 MRQYEVMVILDPDLDERSIAPALEGFLKVIRDLGGSIEKNDIWGRRRLAYEIKTKSGKKV 60
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
+ Y +++ + P A+ E R+ + E V+R+
Sbjct: 61 SEGIYAVVDVQATPDAVKEFDRQANLSETVVRT 93
>gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ ++ GG V G+ +AY I+K KA
Sbjct: 108 LRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE 167
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
Y+ + P +I ++ M D+NV+RS++
Sbjct: 168 TNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMS 206
>gi|323507770|emb|CBQ67641.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 136
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M LYE + + S ++D + LI ENGG VR V G R + R R++++ +
Sbjct: 1 MPLYELLCIAASSAESAPLRDLVKSTSKLILENGGAVRGVQYWGQRRLPQRARRHQQYHS 60
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y M+ + + + ++R D V++ L
Sbjct: 61 TGDYWLMHFDTNAPVLKSLNDRLRADPRVIKWTAL 95
>gi|256370869|ref|YP_003108693.1| ribosomal protein S6 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007453|gb|ACU53020.1| ribosomal protein S6 [Acidimicrobium ferrooxidans DSM 10331]
Length = 112
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + + +S++ + GG + G R +AY I Y
Sbjct: 1 MREYELALITSPALDEEARTALFDRIRSIVNQGGGAITQEAHWGRRMLAYPIAHRTDGAY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F+ + + PA I E+ R + I + VLR T+
Sbjct: 61 SFLRLHAEPATIDELDRVLSIADGVLRHKTI 91
>gi|306824867|ref|ZP_07458211.1| 30S ribosomal protein S6 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304433078|gb|EFM36050.1| 30S ribosomal protein S6 [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 96
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
+N+ A+ A+ E R +I+ ++LR + +
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIV 92
>gi|257866282|ref|ZP_05645935.1| ribosomal protein S6 [Enterococcus casseliflavus EC30]
gi|257873202|ref|ZP_05652855.1| ribosomal protein S6 [Enterococcus casseliflavus EC10]
gi|257875899|ref|ZP_05655552.1| ribosomal protein S6 [Enterococcus casseliflavus EC20]
gi|325567635|ref|ZP_08144302.1| 30S ribosomal protein S6 [Enterococcus casseliflavus ATCC 12755]
gi|257800240|gb|EEV29268.1| ribosomal protein S6 [Enterococcus casseliflavus EC30]
gi|257807366|gb|EEV36188.1| ribosomal protein S6 [Enterococcus casseliflavus EC10]
gi|257810065|gb|EEV38885.1| ribosomal protein S6 [Enterococcus casseliflavus EC20]
gi|325159068|gb|EGC71214.1| 30S ribosomal protein S6 [Enterococcus casseliflavus ATCC 12755]
Length = 99
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I + I ++ S++ +NG EV + R +AY + R+ Y +
Sbjct: 6 YEILYIIRPNIDEEAKAALIARFDSILTDNGAEVIESKDWQKRRLAYEMDGFREGIYHIV 65
Query: 64 NIASP--PAAIHEMKRKMRIDENVLRSLTL 91
++S +AI+E R +I+++++R + +
Sbjct: 66 KVSSSTTASAINEFDRLAKINDDIIRHMIV 95
>gi|118411222|ref|YP_874616.1| 30S ribosomal protein S6 [Thalassiosira pseudonana]
gi|224015819|ref|XP_002297557.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|125987758|sp|A0T104|RR6_THAPS RecName: Full=30S ribosomal protein S6, chloroplastic
gi|116739969|gb|ABK20839.1| 30S ribosomal protein S6 [Thalassiosira pseudonana]
gi|220967765|gb|EED86142.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 103
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K Y ++L + N E+ +++ G R ++Y I ++ ++
Sbjct: 7 YEMMILLTEEFNDNELKTWAFNYAKALRKLNASEISVISR-GKRDLSYEIANQKRGNFIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ +S P I ++ D NVLR L L
Sbjct: 66 ISFSSIPKYIENFSSSLKFDSNVLRFLVL 94
>gi|239637257|ref|ZP_04678245.1| ribosomal protein S6 [Staphylococcus warneri L37603]
gi|239597213|gb|EEQ79722.1| ribosomal protein S6 [Staphylococcus warneri L37603]
gi|330685077|gb|EGG96744.1| ribosomal protein S6 [Staphylococcus epidermidis VCU121]
Length = 98
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ I S A E +R +I+++++R + +
Sbjct: 61 NIVRIKSDNNKATDEFQRLAKINDDIIRYIVI 92
>gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ ++ GG V G+ +AY I+K KA
Sbjct: 108 LRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE 167
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
Y+ + P +I ++ M D+NV+RS++
Sbjct: 168 TNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMS 206
>gi|297622260|ref|YP_003703694.1| 30S ribosomal protein S6 [Truepera radiovictrix DSM 17093]
gi|297163440|gb|ADI13151.1| ribosomal protein S6 [Truepera radiovictrix DSM 17093]
Length = 116
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 1 MKLYEHVFLLRQDISSQQI---KDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M Y+ +L ++S Q+ KD I + I+ GEV +E G + +AY IRK +
Sbjct: 1 MHNYDLNVILDPNLSEAQLGLEKDAIA---AQIERFEGEVLSTDEWGNKRLAYPIRKLNE 57
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
YY+ + P A ++ +R+ +NV+R L
Sbjct: 58 GYYIIYRLRLPETAPRQLATNLRLRDNVMRVL 89
>gi|196229512|ref|ZP_03128377.1| ribosomal protein S6 [Chthoniobacter flavus Ellin428]
gi|196226744|gb|EDY21249.1| ribosomal protein S6 [Chthoniobacter flavus Ellin428]
Length = 105
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + KD I + + +++G V V ++ R +Y K YYV
Sbjct: 7 YEGLLVLNVQGNEDGAKDVIERLEGEFKKDGATVEQVQKMDRRQFSYTAGKLESGYYVNF 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLR 87
+P A+I ++K + +DE+V R
Sbjct: 67 IFNAPAASIDKLKARFTLDEDVYR 90
>gi|221054932|ref|XP_002258605.1| 30s ribosomal protein s6-like protein [Plasmodium knowlesi strain
H]
gi|193808674|emb|CAQ39377.1| 30s ribosomal protein s6-like protein, putative [Plasmodium
knowlesi strain H]
Length = 247
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
L + + +IK I +Y ++ GE LG R + I+K +AYYV +
Sbjct: 132 LFSCNYTISEIKKKIAEYMYELKLVDGENFKAVYLGKRRLVRPIKKQMEAYYVLFSFEMY 191
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
P+ I E+KRK+ + + VLR +V+ +E++
Sbjct: 192 PSLILEIKRKLSLQDAVLR---FMVNKNEKT 219
>gi|184154483|ref|YP_001842823.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227514125|ref|ZP_03944174.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
gi|226703480|sp|B2GEV4|RS6_LACF3 RecName: Full=30S ribosomal protein S6
gi|183225827|dbj|BAG26343.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227087496|gb|EEI22808.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
Length = 97
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R DI + + ++ ++ +NG V + R AY+I K + Y +
Sbjct: 6 YEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWDTRRFAYQIGKYTEGTYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A A+++E R + +++LR + +
Sbjct: 66 NVTADSDASLNEFDRLAKFSDDILRHMIV 94
>gi|283780443|ref|YP_003371198.1| 30S ribosomal protein S6 [Pirellula staleyi DSM 6068]
gi|283438896|gb|ADB17338.1| ribosomal protein S6 [Pirellula staleyi DSM 6068]
Length = 131
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV---RLVNELGMRTIAYRIRKNRKAY 59
+YE++ +L + +Q G +LI++ GGEV RL NE + +AY I ++K
Sbjct: 5 VYENMVILDSNKYAQDPGGMGGTIPALIEKLGGEVLVSRLWNE---QRLAYPIDGHKKGT 61
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + +++ ++RI+E+++R +TL VD
Sbjct: 62 YWITYFRLDGSKLNDFHSQIRINESIVRHMTLKVD 96
>gi|315273280|ref|ZP_07869268.1| 30S ribosomal protein S6 [Listeria marthii FSL S4-120]
gi|313616101|gb|EFR89229.1| 30S ribosomal protein S6 [Listeria marthii FSL S4-120]
Length = 87
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 10 LRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPP 69
+R +I + K + ++ ++ +NG E+ E G R +AY I R +Y + + +
Sbjct: 1 IRPNIEEDEKKAVVERFDGILTDNGAEIIESKEWGKRRLAYEINDYRDGFYHIVKLNADK 60
Query: 70 A-AIHEMKRKMRIDENVLRSLTL 91
A +I+E R +I ++++R + +
Sbjct: 61 ADSINEFDRLAKISDDIIRHMVI 83
>gi|228474158|ref|ZP_04058895.1| ribosomal protein S6 [Staphylococcus hominis SK119]
gi|314935173|ref|ZP_07842526.1| ribosomal protein S6 [Staphylococcus hominis subsp. hominis C80]
gi|228271853|gb|EEK13190.1| ribosomal protein S6 [Staphylococcus hominis SK119]
gi|313656508|gb|EFS20247.1| ribosomal protein S6 [Staphylococcus hominis subsp. hominis C80]
Length = 98
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I+++++R + +
Sbjct: 61 FIVRIKTDNNRATDEFQRLAKINDDIIRYIVI 92
>gi|291548257|emb|CBL21365.1| SSU ribosomal protein S6P [Ruminococcus sp. SR1/5]
Length = 95
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 13 DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAI 72
D ++ K I +Y +I E V E G + +AY I+K + +Y F+ +
Sbjct: 20 DAVVEKAKGYITRYNGVITE-------VEEWGKKKLAYEIQKMHEGFYYFIQFEADSQCP 72
Query: 73 HEMKRKMRIDENVLRSLTL 91
E++R +RI +NVLR L +
Sbjct: 73 AEIERHVRIMDNVLRYLVV 91
>gi|227529856|ref|ZP_03959905.1| ribosomal protein S6 [Lactobacillus vaginalis ATCC 49540]
gi|227350225|gb|EEJ40516.1| ribosomal protein S6 [Lactobacillus vaginalis ATCC 49540]
Length = 98
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ D + ++ ++++NG + + R AY I K + Y +
Sbjct: 6 YEITYIIRPDMEESAKSDLVARFDKILEDNGATIADSKDWSTRRFAYPIDKYTEGTYHVV 65
Query: 64 NIAS-PPAAIHEMKRKMRIDENVLRSLTL 91
N+ + A++E R + ++++LR + +
Sbjct: 66 NLTTDTDEALNEFDRLAKFNDDILRHMII 94
>gi|268609245|ref|ZP_06142972.1| ribosomal protein S6 [Ruminococcus flavefaciens FD-1]
Length = 98
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + + +K I +++ I+ + V + + G R +AY I + YYV
Sbjct: 8 YEVMVVFSLKNGEEPMKALIQKFKERIERHAEAVEVNEDWGKRKLAYPIEDETEGYYVIY 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S P ++ R++ + + +LRSL +V+
Sbjct: 68 TFTSQPDYPADLSRRLNLSDGILRSLVTVVE 98
>gi|269124214|ref|YP_003306791.1| 30S ribosomal protein S6 [Streptobacillus moniliformis DSM 12112]
gi|268315540|gb|ACZ01914.1| ribosomal protein S6 [Streptobacillus moniliformis DSM 12112]
Length = 93
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 45/86 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+L ++ ++ K + + +S++ + G +G R +AY I+K YYV
Sbjct: 4 YEIMFILSTQLTEEEKKANVEKVESILTQAGATEVKTEIMGDRKLAYPIKKKENGYYVLT 63
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+ + E+++K+ I E +++ +
Sbjct: 64 KFSMDGTQLTEVEKKLNISEYLMKYM 89
>gi|9256914|pdb|1QJH|A Chain A, Protein Aggregation And Alzheimer's Disease.
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization
Length = 101
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V LG+ +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLMVLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ + P ++++ R++RI +NV R ++V S E
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRR--VMVVKSQE 95
>gi|302680691|ref|XP_003030027.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune
H4-8]
gi|300103718|gb|EFI95124.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune
H4-8]
Length = 125
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M LY+ + + + IK+ + Q + GG VR ++ G R + R+R++R+AY
Sbjct: 1 MPLYQLLCITVHSPEYKHIKELVRQSAQHVMHAGGVVRSIDSWGTRMLPQRMRRHRQAYN 60
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y ++ + P + + MR D V+R L
Sbjct: 61 YGDYWTLHFDTAPRTLRSLNGIMRQDPRVIRWSVL 95
>gi|225574301|ref|ZP_03782911.1| hypothetical protein RUMHYD_02366 [Blautia hydrogenotrophica DSM
10507]
gi|225038523|gb|EEG48769.1| hypothetical protein RUMHYD_02366 [Blautia hydrogenotrophica DSM
10507]
Length = 95
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + I G + V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKVEDDVRAAVVEKAKGYITRYNGNITEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADADCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|154249362|ref|YP_001410187.1| 30S ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
gi|189045467|sp|A7HKU7|RS6_FERNB RecName: Full=30S ribosomal protein S6
gi|154153298|gb|ABS60530.1| ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
Length = 124
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
M++YE +F+++ D+S ++ + + ++E +V V+ G+R +AY+I K +
Sbjct: 1 MRIYETMFIIKPDVSEEERNKLVENVKKFLEERVKAQVETVDRWGIRKLAYKIGKYFEGD 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
Y M S + +++ ++ +R T +R D + + R R
Sbjct: 61 YTVMYFRSNGQGLDQLENYFKVHPEFMRWQTF-------------RREDLEKKERRAARQ 107
Query: 120 RNVDRKQHVSEEK 132
+ + +++VS+E+
Sbjct: 108 KTGETQENVSQEE 120
>gi|189485363|ref|YP_001956304.1| 30S ribosomal protein S6 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287322|dbj|BAG13843.1| 30S ribosomal protein S6 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 120
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/86 (18%), Positives = 47/86 (54%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F++ ++ +++I++ + +I+++ G ++ + G + AY I K R+ YV+
Sbjct: 3 YESIFIISPEVPAEKIEELTTKAVKIIEDSKGTFKMSQQFGKKRFAYPINKLREGSYVYT 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+ ++ ++ + ++ ++R L
Sbjct: 63 EFSGNGETVNALESFFKFNDLIVRFL 88
>gi|256826414|ref|YP_003150374.1| 30S ribosomal protein S6P [Kytococcus sedentarius DSM 20547]
gi|256689807|gb|ACV07609.1| SSU ribosomal protein S6P [Kytococcus sedentarius DSM 20547]
Length = 95
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 46/87 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ +I + + + + ++++ +GG V + G R +AY I+K + Y
Sbjct: 1 MRQYELMMIIDPEIDERTLPTMVEKLLTVVKTDGGSVDETDIWGRRRLAYDIQKKSEGLY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
+ + E+ R++ ++E+VLR
Sbjct: 61 AVVTLTMGTDTAKELDRQLGLNESVLR 87
>gi|218509548|ref|ZP_03507426.1| 30S ribosomal protein S6 [Rhizobium etli Brasil 5]
Length = 32
Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQ 31
M LYEHVFL RQDIS+QQ+ + QY+ +I+
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIE 31
>gi|288572899|ref|ZP_06391256.1| ribosomal protein S6 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568640|gb|EFC90197.1| ribosomal protein S6 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 94
Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL D+ + + + +I + GG+V V+ G R +AY I K + YY
Sbjct: 1 MRPYEMMVLLEADLEDHSAE--LDGIKEVIAKLGGDVDKVDIWGKRRLAYPIDKRTEGYY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ P+ EM R + + ++R+L + +D
Sbjct: 59 ALVYFKLDPSKQKEMTRLLGLRTAIVRNLVIRLD 92
>gi|320104414|ref|YP_004180005.1| 30S ribosomal protein S6 [Isosphaera pallida ATCC 43644]
gi|319751696|gb|ADV63456.1| ribosomal protein S6 [Isosphaera pallida ATCC 43644]
Length = 134
Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 48/91 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
+YE +FLL +S ++T+ Q ++ ++G E+ + + +AY ++ +RK Y+
Sbjct: 1 MYEGMFLLDSAKASVAWEETVQQVHGILTKHGSEIVASRQWDEKRLAYPVKGHRKGTYLL 60
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + + ++ ++++ +LR L L V
Sbjct: 61 TFFKADASRLKDISHDCKLNDVILRELILKV 91
>gi|313884300|ref|ZP_07818063.1| ribosomal protein S6 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620453|gb|EFR31879.1| ribosomal protein S6 [Eremococcus coleocola ACS-139-V-Col8]
Length = 99
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D++ K+ + ++ S++ +NG E+ + R AY I ++ Y +
Sbjct: 7 YEILYIIRPDLADDAKKELVERFDSILTDNGSEIIESKDWAKRRFAYEINDYKEGIYHLI 66
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSL 89
++ A+ I E R I+ ++LR +
Sbjct: 67 HLKATDSKGIDEFDRLSLINRDILRHM 93
>gi|295398129|ref|ZP_06808178.1| 30S ribosomal protein S6 [Aerococcus viridans ATCC 11563]
gi|294973648|gb|EFG49426.1| 30S ribosomal protein S6 [Aerococcus viridans ATCC 11563]
Length = 100
Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D+ K + Q+ ++ NG + + R +AY I ++ Y +
Sbjct: 8 YEVLYIIRPDMEEASKKALVEQFDQILTSNGVTINESKDWAKRRLAYEINDYKEGIYHLV 67
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSL 89
++ + A I+E R +I++N+LR +
Sbjct: 68 DMEADDAEGINEFDRLAKINDNILRHM 94
>gi|257462523|ref|ZP_05626935.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
gi|317060178|ref|ZP_07924663.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
gi|313685854|gb|EFS22689.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
Length = 94
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + I + L+ NG + + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIINPTVLEEGRDSVIEKISELLTSNGANILKTEKWGERKLAYLIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
V + E++ K+ I E V+R
Sbjct: 61 VLTTFEIDGTKLAEVESKLNITEEVMR 87
>gi|157363693|ref|YP_001470460.1| 30S ribosomal protein S6 [Thermotoga lettingae TMO]
gi|157314297|gb|ABV33396.1| ribosomal protein S6 [Thermotoga lettingae TMO]
Length = 114
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I E G ++ VN G+R +AY I + Y
Sbjct: 3 RIYESMFIIDPRLNDEERETLVERIKEIISERVKGTIQTVNRWGLRKLAYPISHLTEGDY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +PP +++++ R+ +LR T
Sbjct: 63 TVLLFKAPPTDLNKLEEFFRVTPQILRWQTF 93
>gi|160892969|ref|ZP_02073757.1| hypothetical protein CLOL250_00506 [Clostridium sp. L2-50]
gi|156865052|gb|EDO58483.1| hypothetical protein CLOL250_00506 [Clostridium sp. L2-50]
Length = 96
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + ++ I++ + V + G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVNAKIDEDARTAAVEKVKAYIEKANATITNVEDCGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E VLR L + +D+
Sbjct: 61 YFIQFDAEADVPAQLEANVRIMEPVLRYLCVRLDAE 96
>gi|193216924|ref|YP_002000166.1| ribosomal protein S6 [Mycoplasma arthritidis 158L3-1]
gi|226703490|sp|B3PN60|RS6_MYCA5 RecName: Full=30S ribosomal protein S6
gi|193002247|gb|ACF07462.1| ribosomal protein S6 [Mycoplasma arthritidis 158L3-1]
Length = 160
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + L D + +Q+ + + S+++++ ++ +L +AY I K +A Y
Sbjct: 1 MSNYEIMILANPDSTLEQVSELLF---SVLKKSDTKI---EKLERSELAYPIHKLTRATY 54
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + S P + E+ RK+ I + +LRSL + +DS + ++R PR +
Sbjct: 55 YLVTVKSDPQLMAELTRKLNIAKFILRSLIINLDSEKGLKPRKVKRF--------IPRAK 106
Query: 121 NVDRKQHVSEEKPL 134
N DR + + +P
Sbjct: 107 NNDRSANQGDRRPF 120
>gi|15923355|ref|NP_370889.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926066|ref|NP_373599.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
N315]
gi|21282070|ref|NP_645158.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482595|ref|YP_039819.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485245|ref|YP_042466.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750077|ref|YP_415818.1| 30S ribosomal protein S6 [Staphylococcus aureus RF122]
gi|87161421|ref|YP_493080.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194147|ref|YP_498937.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266852|ref|YP_001245795.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JH9]
gi|150392898|ref|YP_001315573.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JH1]
gi|151220569|ref|YP_001331391.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978693|ref|YP_001440952.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161353537|ref|YP_185328.2| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
COL]
gi|161508637|ref|YP_001574296.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142673|ref|ZP_03567166.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316534|ref|ZP_04839747.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253730729|ref|ZP_04864894.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735108|ref|ZP_04869273.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005160|ref|ZP_05143761.2| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424509|ref|ZP_05600938.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427178|ref|ZP_05603580.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429814|ref|ZP_05606201.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 68-397]
gi|257432518|ref|ZP_05608881.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus E1410]
gi|257435420|ref|ZP_05611471.1| SSU ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M876]
gi|257794200|ref|ZP_05643179.1| 30S ribosomal protein S6 [Staphylococcus aureus A9781]
gi|258413515|ref|ZP_05681790.1| 30S ribosomal protein S6 [Staphylococcus aureus A9763]
gi|258421361|ref|ZP_05684288.1| SSU ribosomal protein S6 [Staphylococcus aureus A9719]
gi|258424582|ref|ZP_05687459.1| SSU ribosomal protein S6 [Staphylococcus aureus A9635]
gi|258436938|ref|ZP_05689278.1| ribosomal protein S6 [Staphylococcus aureus A9299]
gi|258444345|ref|ZP_05692679.1| ribosomal protein S6 [Staphylococcus aureus A8115]
gi|258444882|ref|ZP_05693203.1| ribosomal protein S6 [Staphylococcus aureus A6300]
gi|258448087|ref|ZP_05696216.1| ribosomal protein S6 [Staphylococcus aureus A6224]
gi|258453042|ref|ZP_05701035.1| ribosomal protein S6 [Staphylococcus aureus A5948]
gi|258455920|ref|ZP_05703875.1| ribosomal protein S6 [Staphylococcus aureus A5937]
gi|262048927|ref|ZP_06021807.1| 30S ribosomal protein S6 [Staphylococcus aureus D30]
gi|262052851|ref|ZP_06025036.1| 30S ribosomal protein S6 [Staphylococcus aureus 930918-3]
gi|269202013|ref|YP_003281282.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893525|ref|ZP_06301758.1| 30S ribosomal protein S6 [Staphylococcus aureus A8117]
gi|282907348|ref|ZP_06315196.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907691|ref|ZP_06315533.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912598|ref|ZP_06320394.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913223|ref|ZP_06321015.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M899]
gi|282915687|ref|ZP_06323458.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
D139]
gi|282921662|ref|ZP_06329380.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C427]
gi|282922338|ref|ZP_06330029.1| 30S ribosomal protein S6 [Staphylococcus aureus A9765]
gi|282922850|ref|ZP_06330540.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C101]
gi|282927419|ref|ZP_06335037.1| 30S ribosomal protein S6 [Staphylococcus aureus A10102]
gi|283768093|ref|ZP_06341008.1| small subunit ribosomal protein S6 [Staphylococcus aureus subsp.
aureus H19]
gi|283959803|ref|ZP_06377244.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023374|ref|ZP_06377772.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
132]
gi|293498272|ref|ZP_06666126.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509213|ref|ZP_06667931.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M809]
gi|293550477|ref|ZP_06673149.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M1015]
gi|294850013|ref|ZP_06790751.1| 30S ribosomal protein S6 [Staphylococcus aureus A9754]
gi|295405637|ref|ZP_06815447.1| 30S ribosomal protein S6 [Staphylococcus aureus A8819]
gi|295426899|ref|ZP_06819538.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275192|ref|ZP_06857699.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MR1]
gi|297209121|ref|ZP_06925520.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245544|ref|ZP_06929412.1| 30S ribosomal protein S6 [Staphylococcus aureus A8796]
gi|297588888|ref|ZP_06947529.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MN8]
gi|300911122|ref|ZP_07128571.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380331|ref|ZP_07363051.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54039533|sp|P66596|RS6_STAAW RecName: Full=30S ribosomal protein S6
gi|54039565|sp|P99142|RS6_STAAN RecName: Full=30S ribosomal protein S6
gi|54041976|sp|P66595|RS6_STAAM RecName: Full=30S ribosomal protein S6
gi|56749399|sp|Q6GCA7|RS6_STAAS RecName: Full=30S ribosomal protein S6
gi|56749428|sp|Q6GJV3|RS6_STAAR RecName: Full=30S ribosomal protein S6
gi|82581623|sp|Q5HIS9|RS6_STAAC RecName: Full=30S ribosomal protein S6
gi|91207792|sp|Q2YVJ2|RS6_STAAB RecName: Full=30S ribosomal protein S6
gi|122540227|sp|Q2G113|RS6_STAA8 RecName: Full=30S ribosomal protein S6
gi|123487277|sp|Q2FJP8|RS6_STAA3 RecName: Full=30S ribosomal protein S6
gi|166227388|sp|A7WY58|RS6_STAA1 RecName: Full=30S ribosomal protein S6
gi|189045588|sp|A6TYL8|RS6_STAA2 RecName: Full=30S ribosomal protein S6
gi|189045589|sp|A5IPU6|RS6_STAA9 RecName: Full=30S ribosomal protein S6
gi|189045590|sp|A6QE47|RS6_STAAE RecName: Full=30S ribosomal protein S6
gi|189045591|sp|A8YZJ1|RS6_STAAT RecName: Full=30S ribosomal protein S6
gi|13700279|dbj|BAB41577.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
N315]
gi|14246133|dbj|BAB56527.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203506|dbj|BAB94206.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MW2]
gi|49240724|emb|CAG39385.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49243688|emb|CAG42112.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82655608|emb|CAI80004.1| 30S ribosomal protein S6 [Staphylococcus aureus RF122]
gi|87127395|gb|ABD21909.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201705|gb|ABD29515.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147739921|gb|ABQ48219.1| SSU ribosomal protein S6P [Staphylococcus aureus subsp. aureus
JH9]
gi|149945350|gb|ABR51286.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus JH1]
gi|150373369|dbj|BAF66629.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156720828|dbj|BAF77245.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367446|gb|ABX28417.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725573|gb|EES94302.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726908|gb|EES95637.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273527|gb|EEV05629.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276809|gb|EEV08260.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280295|gb|EEV10882.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 68-397]
gi|257283397|gb|EEV13529.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus E1410]
gi|257286016|gb|EEV16132.1| SSU ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M876]
gi|257788172|gb|EEV26512.1| 30S ribosomal protein S6 [Staphylococcus aureus A9781]
gi|257839762|gb|EEV64231.1| 30S ribosomal protein S6 [Staphylococcus aureus A9763]
gi|257842785|gb|EEV67207.1| SSU ribosomal protein S6 [Staphylococcus aureus A9719]
gi|257845177|gb|EEV69214.1| SSU ribosomal protein S6 [Staphylococcus aureus A9635]
gi|257848729|gb|EEV72716.1| ribosomal protein S6 [Staphylococcus aureus A9299]
gi|257850604|gb|EEV74552.1| ribosomal protein S6 [Staphylococcus aureus A8115]
gi|257856200|gb|EEV79114.1| ribosomal protein S6 [Staphylococcus aureus A6300]
gi|257858602|gb|EEV81476.1| ribosomal protein S6 [Staphylococcus aureus A6224]
gi|257859252|gb|EEV82107.1| ribosomal protein S6 [Staphylococcus aureus A5948]
gi|257862132|gb|EEV84905.1| ribosomal protein S6 [Staphylococcus aureus A5937]
gi|259159252|gb|EEW44311.1| 30S ribosomal protein S6 [Staphylococcus aureus 930918-3]
gi|259162999|gb|EEW47561.1| 30S ribosomal protein S6 [Staphylococcus aureus D30]
gi|262074303|gb|ACY10276.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ED98]
gi|269939945|emb|CBI48317.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TW20]
gi|282315071|gb|EFB45457.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C101]
gi|282316077|gb|EFB46461.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C427]
gi|282320503|gb|EFB50842.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
D139]
gi|282323323|gb|EFB53642.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M899]
gi|282324294|gb|EFB54610.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328596|gb|EFB58867.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330247|gb|EFB59768.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590743|gb|EFB95819.1| 30S ribosomal protein S6 [Staphylococcus aureus A10102]
gi|282593464|gb|EFB98459.1| 30S ribosomal protein S6 [Staphylococcus aureus A9765]
gi|282764211|gb|EFC04338.1| 30S ribosomal protein S6 [Staphylococcus aureus A8117]
gi|283461972|gb|EFC09056.1| small subunit ribosomal protein S6 [Staphylococcus aureus subsp.
aureus H19]
gi|283469672|emb|CAQ48883.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ST398]
gi|283789395|gb|EFC28222.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816087|gb|ADC36574.1| SSU ribosomal protein S6p [Staphylococcus aureus 04-02981]
gi|290919524|gb|EFD96600.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M1015]
gi|291097203|gb|EFE27461.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467965|gb|EFF10473.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M809]
gi|294823147|gb|EFG39578.1| 30S ribosomal protein S6 [Staphylococcus aureus A9754]
gi|294969712|gb|EFG45731.1| 30S ribosomal protein S6 [Staphylococcus aureus A8819]
gi|295129351|gb|EFG58978.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296886054|gb|EFH24988.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177530|gb|EFH36781.1| 30S ribosomal protein S6 [Staphylococcus aureus A8796]
gi|297577399|gb|EFH96112.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MN8]
gi|300887301|gb|EFK82497.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332102|gb|ADL22295.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750237|gb|ADL64414.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341312|gb|EFM07231.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312436520|gb|ADQ75591.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828887|emb|CBX33729.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130013|gb|EFT86002.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194825|gb|EFU25214.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198047|gb|EFU28379.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139326|gb|EFW31205.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142876|gb|EFW34672.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438825|gb|EGA96563.1| 30S ribosomal protein S6 [Staphylococcus aureus O11]
gi|323442578|gb|EGB00206.1| 30S ribosomal protein S6 [Staphylococcus aureus O46]
gi|329313058|gb|AEB87471.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
T0131]
gi|329724195|gb|EGG60708.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21189]
gi|329725860|gb|EGG62339.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21172]
gi|329732326|gb|EGG68676.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21193]
Length = 98
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + +Y
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ + S A E +R +I ++++R + +
Sbjct: 61 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVI 92
>gi|282902950|ref|ZP_06310843.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus C160]
gi|282597409|gb|EFC02368.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus C160]
Length = 98
Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + +Y
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ + S A E +R +I ++++R + +
Sbjct: 61 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVI 92
>gi|256827568|ref|YP_003151527.1| 30S ribosomal protein S6P [Cryptobacterium curtum DSM 15641]
gi|256583711|gb|ACU94845.1| SSU ribosomal protein S6P [Cryptobacterium curtum DSM 15641]
Length = 97
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + I + + ++I ++ G V V + G R +AY I + Y
Sbjct: 1 MKAYELLYFVAPSIDEETRTAVSTRINTVITDDKGVVDNVEQWGKRKLAYEIEGLNEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ + P +I E+ R +RI + V R + +
Sbjct: 61 TLVDFHADPNSIAELDRVLRITDAVKRHMIV 91
>gi|289547947|ref|YP_003472935.1| ribosomal protein S6 [Thermocrinis albus DSM 14484]
gi|289181564|gb|ADC88808.1| ribosomal protein S6 [Thermocrinis albus DSM 14484]
Length = 112
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-YYVF 62
YE V + + +S ++++ + + + I + GG++ + G++ +AY I + + YY+F
Sbjct: 12 YESVVVFKPTLSEEEVQRRLQEVREFITKKGGQILEEQDWGLKQLAYPINRFQHGRYYLF 71
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + P +E+ +I+++V+R L + V
Sbjct: 72 LIRSENPELPNELDFFYKINDDVIRWLNIKV 102
>gi|225630394|ref|YP_002727185.1| ribosomal protein S6 [Wolbachia sp. wRi]
gi|225592375|gb|ACN95394.1| ribosomal protein S6 [Wolbachia sp. wRi]
Length = 257
Score = 40.4 bits (93), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY K + +Y M I+S + + E R+M+++ENV+R + VD
Sbjct: 188 GLLDFAYHTNKMKSGHYCIMCISSTASILDEFVRRMKLNENVIRHFPVQVD 238
>gi|223043351|ref|ZP_03613397.1| ribosomal protein S6 [Staphylococcus capitis SK14]
gi|314935021|ref|ZP_07842380.1| ribosomal protein S6 [Staphylococcus caprae C87]
gi|222443140|gb|EEE49239.1| ribosomal protein S6 [Staphylococcus capitis SK14]
gi|313652951|gb|EFS16714.1| ribosomal protein S6 [Staphylococcus caprae C87]
Length = 98
Score = 40.0 bits (92), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I+++++R + +
Sbjct: 61 NIVRIKTDNNKATDEFQRLAKINDDIIRYIVI 92
>gi|262037249|ref|ZP_06010731.1| ribosomal protein S6 [Leptotrichia goodfellowii F0264]
gi|261748721|gb|EEY36078.1| ribosomal protein S6 [Leptotrichia goodfellowii F0264]
Length = 94
Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L +S ++ K I + + + G G R +AY I+K YY
Sbjct: 1 MKNYEIMFILSTQLSDEEKKAGIALVEDTLTKAGAAELKTEVWGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E++L+ + +
Sbjct: 61 VLTLFQIDGTKLPEVEAKLNISESILKYMIV 91
>gi|58698589|ref|ZP_00373487.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534885|gb|EAL58986.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 198
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY K + +Y M I+S + + E R+M+++ENV+R + VD
Sbjct: 129 GLLDFAYHTNKMKSGHYCIMCISSTASILDEFVRRMKLNENVIRHFPVQVD 179
>gi|257452937|ref|ZP_05618236.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|257466683|ref|ZP_05630994.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
gi|315917836|ref|ZP_07914076.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059478|ref|ZP_07923963.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|313685154|gb|EFS21989.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|313691711|gb|EFS28546.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
Length = 94
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + I + L+ NG + + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIISPTVLEEGRDAIIEKVSELLTSNGANILKTEKWGERKLAYLIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + E++ K+ I E V+R + +
Sbjct: 61 VLTTFEIDGTKLAEVESKLNITEEVMRYIVV 91
>gi|256370725|ref|YP_003108550.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri SMDSEM]
gi|256009517|gb|ACU52877.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri SMDSEM]
Length = 122
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V ++ +S +QIK T Y + + + ++ G++ +AY I+ Y +
Sbjct: 3 YETVLVITPVLSEEQIKLTTSNYINFLIDKKAKLIFQENWGLKKLAYPIQNKTSGCYHII 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ P I +K K+ DE ++R L +
Sbjct: 63 YFLAKPKLILNLKWKLLRDEKIMRFLII 90
>gi|289551781|ref|YP_003472685.1| SSU ribosomal protein S6p [Staphylococcus lugdunensis HKU09-01]
gi|315660047|ref|ZP_07912905.1| 30S ribosomal protein S6 [Staphylococcus lugdunensis M23590]
gi|289181312|gb|ADC88557.1| SSU ribosomal protein S6p [Staphylococcus lugdunensis HKU09-01]
gi|315494948|gb|EFU83285.1| 30S ribosomal protein S6 [Staphylococcus lugdunensis M23590]
Length = 98
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I+++++R + +
Sbjct: 61 NIVRIKTDNNRATDEFQRLAKINDDIIRYIVI 92
>gi|227874247|ref|ZP_03992446.1| possible ribosomal protein S6 [Oribacterium sinus F0268]
gi|227839916|gb|EEJ50347.1| possible ribosomal protein S6 [Oribacterium sinus F0268]
Length = 113
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQE-NGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE +L + ++ I + + I NG V + E G + +AY I+ ++AY
Sbjct: 1 MNKYELCVVLSAKLDDEERAAAIEKIKGFITRYNGTVVEPIEEWGKKRLAYEIQHMKEAY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y F+ +E++ ++RI E V+R L +
Sbjct: 61 YYFIPFTGDANTPNELEDQVRIMEPVIRYLVV 92
>gi|241889102|ref|ZP_04776406.1| ribosomal protein S6 [Gemella haemolysans ATCC 10379]
gi|241864351|gb|EER68729.1| ribosomal protein S6 [Gemella haemolysans ATCC 10379]
Length = 95
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIDEEAKKAVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ + S A+ E R +I ++++R + +
Sbjct: 60 YVVELTSATDASTKEFDRLAKISDDIIRHMVV 91
>gi|58584757|ref|YP_198330.1| ribosomal protein S6 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|75497804|sp|Q5GSD6|RS6_WOLTR RecName: Full=30S ribosomal protein S6
gi|58419073|gb|AAW71088.1| Ribosomal protein S6 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 260
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY I K + +Y M I+S + E R+++++EN++R L++ VD
Sbjct: 191 GLLDFAYPINKMKSGHYCIMCISSTSNIMDEFVRRIKLNENIIRHLSVHVD 241
>gi|227508136|ref|ZP_03938185.1| 30S ribosomal protein S6 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227511160|ref|ZP_03941209.1| 30S ribosomal protein S6 [Lactobacillus buchneri ATCC 11577]
gi|227523347|ref|ZP_03953396.1| 30S ribosomal protein S6 [Lactobacillus hilgardii ATCC 8290]
gi|227085642|gb|EEI20954.1| 30S ribosomal protein S6 [Lactobacillus buchneri ATCC 11577]
gi|227089453|gb|EEI24765.1| 30S ribosomal protein S6 [Lactobacillus hilgardii ATCC 8290]
gi|227192365|gb|EEI72432.1| 30S ribosomal protein S6 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 98
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYY 60
K YE +++R DI I ++ ++ +NG ++ + R AY I N Y+
Sbjct: 4 KKYEITYIIRPDIEEAAKSSLIERFDKIVTDNGAKILDSKDWSKRRFAYEIGGYNEGTYH 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + A++E R +I++++LR + ++ D
Sbjct: 64 IITLTSDNDTALNEFDRLSKINDDILRHMIVVRD 97
>gi|315644251|ref|ZP_07897421.1| ribosomal protein S6 [Paenibacillus vortex V453]
gi|315280626|gb|EFU43915.1| ribosomal protein S6 [Paenibacillus vortex V453]
Length = 53
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 43 LGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+G R +AY I+K R +V +N + P + E++R M+I + V+R L
Sbjct: 1 MGKRRLAYEIKKFRDGVFVLVNFNATPEVVAELERLMKISDEVIRYL 47
>gi|329768687|ref|ZP_08260171.1| 30S ribosomal protein S6 [Gemella haemolysans M341]
gi|328836401|gb|EGF86066.1| 30S ribosomal protein S6 [Gemella haemolysans M341]
Length = 95
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIDEEAKKTVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ + S A+ E R +I ++++R + +
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVV 91
>gi|308812434|ref|XP_003083524.1| unnamed protein product [Ostreococcus tauri]
gi|116055405|emb|CAL58073.1| unnamed protein product [Ostreococcus tauri]
Length = 145
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V LLR D + Q++++ + G E G++ AY I+ AY V +
Sbjct: 51 YEGVLLLRPDCDDATRSGALDQFKAMFND-GLASWEQTERGLQPNAYEIKGYPDAYQVVV 109
Query: 64 NIASPPAAIHEM-----KRKMRIDENVLRSLTL 91
N + PPAA K + +E +LRS+ L
Sbjct: 110 NFSCPPAAFKNAYEELSKPVVGQEEVILRSMFL 142
>gi|257125007|ref|YP_003163121.1| ribosomal protein S6 [Leptotrichia buccalis C-1013-b]
gi|257048946|gb|ACV38130.1| ribosomal protein S6 [Leptotrichia buccalis C-1013-b]
Length = 94
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 44/89 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L ++ ++ + + + ++ G G R +AY I+K YY
Sbjct: 1 MRNYEIMFILSTQLTDEEKQAGVAFVEKILTAAGATEVKTEIWGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V + +E++ K+ I+E++L+ +
Sbjct: 61 VLTTFQADGTKFNEIETKLNINESILKYM 89
>gi|115489096|ref|NP_001067035.1| Os12g0563200 [Oryza sativa Japonica Group]
gi|113649542|dbj|BAF30054.1| Os12g0563200 [Oryza sativa Japonica Group]
Length = 152
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 40 VNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N G+R +AY+I+K R A Y+ MN I++ K + DE ++R L +
Sbjct: 2 LNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKTLLDKDERIIRHLVM 53
>gi|99034687|ref|ZP_01314627.1| hypothetical protein Wendoof_01000558 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|161378181|ref|NP_966535.2| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 257
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY K + +Y M I+S + + E R+M+++ENV+R + VD
Sbjct: 188 GLLDFAYHKNKMKSGHYCIMCISSTASILDEFMRRMKLNENVIRHFPVQVD 238
>gi|242372654|ref|ZP_04818228.1| 30S ribosomal protein S6 [Staphylococcus epidermidis M23864:W1]
gi|242349571|gb|EES41172.1| 30S ribosomal protein S6 [Staphylococcus epidermidis M23864:W1]
Length = 98
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKALVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I+++++R + +
Sbjct: 61 NIVRIKTDNNKATDEFQRLAKINDDIIRYIVI 92
>gi|148543250|ref|YP_001270620.1| 30S ribosomal protein S6 [Lactobacillus reuteri DSM 20016]
gi|184152662|ref|YP_001841003.1| 30S ribosomal protein S6 [Lactobacillus reuteri JCM 1112]
gi|194467409|ref|ZP_03073396.1| ribosomal protein S6 [Lactobacillus reuteri 100-23]
gi|227364313|ref|ZP_03848406.1| ribosomal protein S6 [Lactobacillus reuteri MM2-3]
gi|227543725|ref|ZP_03973774.1| ribosomal protein S6 [Lactobacillus reuteri CF48-3A]
gi|300908790|ref|ZP_07126253.1| 30S ribosomal protein S6 [Lactobacillus reuteri SD2112]
gi|325683512|ref|ZP_08163028.1| 30S ribosomal protein S6 [Lactobacillus reuteri MM4-1A]
gi|189045474|sp|A5VHF9|RS6_LACRD RecName: Full=30S ribosomal protein S6
gi|226703481|sp|B2G4Z1|RS6_LACRJ RecName: Full=30S ribosomal protein S6
gi|148530284|gb|ABQ82283.1| SSU ribosomal protein S6P [Lactobacillus reuteri DSM 20016]
gi|183224006|dbj|BAG24523.1| 30S ribosomal protein S6 [Lactobacillus reuteri JCM 1112]
gi|194454445|gb|EDX43342.1| ribosomal protein S6 [Lactobacillus reuteri 100-23]
gi|227070626|gb|EEI08956.1| ribosomal protein S6 [Lactobacillus reuteri MM2-3]
gi|227186293|gb|EEI66364.1| ribosomal protein S6 [Lactobacillus reuteri CF48-3A]
gi|300894197|gb|EFK87555.1| 30S ribosomal protein S6 [Lactobacillus reuteri SD2112]
gi|324977862|gb|EGC14813.1| 30S ribosomal protein S6 [Lactobacillus reuteri MM4-1A]
Length = 98
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R DI + + ++ ++ +NG + + R AY I K + Y +
Sbjct: 6 YEITYIIRPDIEESAKSELVDRFDKILADNGATIADSKDWSTRRFAYPIAKYTEGTYHVV 65
Query: 64 NIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N+ + A++E R + +++LR + + +D+
Sbjct: 66 NLTTDSDQALNEFDRLAKFSDDILRHMIVKLDA 98
>gi|118411090|ref|YP_874485.1| 30S ribosomal protein S6 [Phaeodactylum tricornutum]
gi|125987757|sp|A0T0L0|RR6_PHATC RecName: Full=30S ribosomal protein S6, chloroplastic
gi|116739837|gb|ABK20708.1| 30S ribosomal protein S6 [Phaeodactylum tricornutum]
Length = 98
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K + Y ++L + + ++ +++ G +AY I K Y+
Sbjct: 7 YEIMILLTEEFNDSELKTWVFNYAKNLRKFSVCDISVISR-GKHNLAYPIETKMKGNYIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P I + +++D NVLR L
Sbjct: 66 LNFSSMPKYITNFSKTLKMDSNVLRFLVF 94
>gi|331700404|ref|YP_004397363.1| 30S ribosomal protein S6 [Lactobacillus buchneri NRRL B-30929]
gi|329127747|gb|AEB72300.1| 30S ribosomal protein S6 [Lactobacillus buchneri NRRL B-30929]
Length = 98
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYY 60
K YE +++R DI I ++ ++ +NG +V + R AY I N Y+
Sbjct: 4 KKYEITYIIRPDIEESAKSALIERFDKILTDNGAKVLSSKDWSKRRFAYEIGGFNEGTYH 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V A+++E R +I+ ++LR + ++ D
Sbjct: 64 VVTLTTDSDASLNEFDRLSKINGDILRHMIVVRD 97
>gi|330850852|ref|YP_004376602.1| ribosomal protein S6 [Fistulifera sp. JPCC DA0580]
gi|328835672|dbj|BAK18968.1| ribosomal protein S6 [Fistulifera sp. JPCC DA0580]
Length = 98
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K + Y ++L + + ++ +++ G +AY I + K Y+
Sbjct: 7 YEIMILLTEEFNDSELKTWVFNYAKNLRKFSVCDISVISR-GKHNLAYAIDEKLKGNYIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P I + + +++D NVLR L
Sbjct: 66 LNFSSMPKYIEDFSQILKLDSNVLRFLVF 94
>gi|227487712|ref|ZP_03918028.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541419|ref|ZP_03971468.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092333|gb|EEI27645.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182807|gb|EEI63779.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 89
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 17 QQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMK 76
+ + ++ +Y ++++ GG V V+ R +AY I K + YV +++ + E+
Sbjct: 11 RTVAPSLDKYLEVVRKEGGSVDKVDVWPKRRLAYPINKKEEGIYVVLDLTCESDTVLELD 70
Query: 77 RKMRIDENVLRSLTL 91
R + I E VLR+ L
Sbjct: 71 RLLGISEMVLRTKVL 85
>gi|70727627|ref|YP_254543.1| 30S ribosomal protein S6 [Staphylococcus haemolyticus JCSC1435]
gi|82581624|sp|Q4L340|RS6_STAHJ RecName: Full=30S ribosomal protein S6
gi|68448353|dbj|BAE05937.1| 30S ribosomal protein S6 [Staphylococcus haemolyticus JCSC1435]
Length = 98
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ I + A E +R +I ++++R + +
Sbjct: 61 NIVRIKTDNNRATDEFQRLAKISDDIIRYIVI 92
>gi|42527185|ref|NP_972283.1| 30S ribosomal protein S6 [Treponema denticola ATCC 35405]
gi|61216252|sp|Q73M32|RS6_TREDE RecName: Full=30S ribosomal protein S6
gi|41817609|gb|AAS12194.1| ribosomal protein S6 [Treponema denticola ATCC 35405]
gi|325474235|gb|EGC77423.1| 30S ribosomal protein S6 [Treponema denticola F0402]
Length = 93
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
VF + +D+ K I S++ + G +++ G R +AY I+K K YV NI
Sbjct: 9 VFPVEEDLY----KPGIDALHSILADFGVQIKSEEPFGDRDLAYEIKKKTKGRYVLFNIE 64
Query: 67 SPPAAIHEMKRKMRIDENVLRSL 89
+ PA + E+ ++ ++ +L L
Sbjct: 65 ADPAKMIELDKRFKLITQMLTYL 87
>gi|260655515|ref|ZP_05861003.1| ribosomal protein S6 [Jonquetella anthropi E3_33 E1]
gi|260629963|gb|EEX48157.1| ribosomal protein S6 [Jonquetella anthropi E3_33 E1]
Length = 107
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 1 MKLYEHVFLLRQDIS--SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
++LYE + ++ + S +IK + L+ GEV + G R +AY I+ +
Sbjct: 14 VRLYEMMVIINPSVEEHSAEIKGI----EELVARLSGEVTKSDLWGKRRLAYEIKGLNEG 69
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
YV + P+A+ E+ R M++ NV+R + + D
Sbjct: 70 IYVVFELKLDPSALSELDRLMKLRPNVVRHMVTVRD 105
>gi|317496135|ref|ZP_07954495.1| ribosomal protein S6 [Gemella moribillum M424]
gi|316913710|gb|EFV35196.1| ribosomal protein S6 [Gemella moribillum M424]
Length = 95
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I A+Y
Sbjct: 1 MRKYEVIFAVQPRIDEEAKKAVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFTDAFY 59
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ + S A+ E R +I ++++R + +
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVV 91
>gi|42410359|gb|AAS14469.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 120
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY K + +Y M I+S + + E R+M+++ENV+R + VD
Sbjct: 51 GLLDFAYHKNKMKSGHYCIMCISSTASILDEFMRRMKLNENVIRHFPVQVD 101
>gi|94995010|ref|YP_603108.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10750]
gi|94548518|gb|ABF38564.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10750]
Length = 84
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMR 80
+N+ A+ AA++E R +
Sbjct: 61 HIVNLEATDAAALNEFDRSFK 81
>gi|225677180|ref|ZP_03788176.1| ribosomal protein S6 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590767|gb|EEH11998.1| ribosomal protein S6 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 121
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY K + +Y M I+S + + E R+M+++ENV+R + VD
Sbjct: 52 GLLDFAYHKNKMKSGHYCIMCISSTASILDEFMRRMKLNENVIRHFPVQVD 102
>gi|312869228|ref|ZP_07729400.1| ribosomal protein S6 [Lactobacillus oris PB013-T2-3]
gi|311095249|gb|EFQ53521.1| ribosomal protein S6 [Lactobacillus oris PB013-T2-3]
Length = 98
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYYVF 62
YE +++R DI + + ++ ++ +NG ++ + R AY I K Y+V
Sbjct: 6 YEITYIIRPDIEESAKSELVDRFDKVLTDNGADIAESKDWSTRRFAYPIDKYTEGTYHVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
A++E R + +++LR + + +D+
Sbjct: 66 TLTTDTDEALNEFDRLSKFSDDILRHMIVKLDA 98
>gi|329769491|ref|ZP_08260901.1| 30S ribosomal protein S6 [Gemella sanguinis M325]
gi|328838706|gb|EGF88304.1| 30S ribosomal protein S6 [Gemella sanguinis M325]
Length = 95
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIEEEAKKAVVERFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ + S A+ E R +I ++++R + +
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVV 91
>gi|330718018|ref|ZP_08312618.1| ribosomal protein S6 [Leuconostoc fallax KCTC 3537]
Length = 98
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ +G + + R AY I R+ Y +
Sbjct: 5 YELTYIVRPDLEADAKKALVERFDGILTTDGATITKSADWATRRFAYEIDGYREGTYHVI 64
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N A AI+E R +I +++LR + + D+
Sbjct: 65 NFNADNDDAINEFDRLAKISQDILRHMVVKRDA 97
>gi|223934220|ref|ZP_03626155.1| ribosomal protein S6 [Streptococcus suis 89/1591]
gi|223897117|gb|EEF63543.1| ribosomal protein S6 [Streptococcus suis 89/1591]
Length = 99
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+L +++++R +I + + ++ S++ +NG + R +AY I+ R+ Y
Sbjct: 5 RLIRNLYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYH 64
Query: 62 FMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A+ A+ E R +I+ ++LR + + +D+
Sbjct: 65 IVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA 99
>gi|330836669|ref|YP_004411310.1| 30S ribosomal protein S6 [Spirochaeta coccoides DSM 17374]
gi|329748572|gb|AEC01928.1| 30S ribosomal protein S6 [Spirochaeta coccoides DSM 17374]
Length = 100
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 32 ENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
E G + +++G+RT+AY I+K K +YV+ + + PA I +++ + +L+ L +
Sbjct: 30 EKGVIITKQDDMGVRTLAYLIKKQDKGHYVYFELQADPADIKGYEKQFLLAPQILKFLFV 89
Query: 92 LVDSH 96
+ H
Sbjct: 90 KKEIH 94
>gi|299820816|ref|ZP_07052705.1| 30S ribosomal protein S6 [Listeria grayi DSM 20601]
gi|299817837|gb|EFI85072.1| 30S ribosomal protein S6 [Listeria grayi DSM 20601]
Length = 97
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++++R +I + K + ++ ++ +G E+ E G R +AY I +Y
Sbjct: 3 KKYEVMYIIRPNIEEDEKKALVERFDGILGHDGAEIIESKEWGKRRLAYEINDFNDGFYH 62
Query: 62 FMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+ + + A +I+E R +I +++R + +
Sbjct: 63 IVKLNAENANSINEFDRLAKISGDIIRHIVI 93
>gi|259502124|ref|ZP_05745026.1| 30S ribosomal protein S6 [Lactobacillus antri DSM 16041]
gi|259169937|gb|EEW54432.1| 30S ribosomal protein S6 [Lactobacillus antri DSM 16041]
Length = 98
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYYVF 62
YE +++R DI + + ++ ++ +NG ++ + R AY I K Y+V
Sbjct: 6 YEITYIIRPDIEESAKSELVERFDKVLTDNGADIAESKDWSTRRFAYPIDKYTEGTYHVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
A++E R + +++LR + + +D+
Sbjct: 66 TLTTDTDEALNEFDRLSKFSDDILRHMIVKLDA 98
>gi|27469290|ref|NP_765927.1| 30S ribosomal protein S6 [Staphylococcus epidermidis ATCC 12228]
gi|57865983|ref|YP_187644.1| 30S ribosomal protein S6 [Staphylococcus epidermidis RP62A]
gi|242243299|ref|ZP_04797744.1| 30S ribosomal protein S6 [Staphylococcus epidermidis W23144]
gi|251811313|ref|ZP_04825786.1| 30S ribosomal protein S6 [Staphylococcus epidermidis BCM-HMP0060]
gi|282874666|ref|ZP_06283548.1| ribosomal protein S6 [Staphylococcus epidermidis SK135]
gi|293367632|ref|ZP_06614284.1| 30S ribosomal protein S6 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|32171535|sp|Q8CQP4|RS6_STAES RecName: Full=30S ribosomal protein S6
gi|73919119|sp|Q5HRZ5|RS6_STAEQ RecName: Full=30S ribosomal protein S6
gi|27316840|gb|AAO06015.1|AE016752_48 30S ribosomal protein S6 [Staphylococcus epidermidis ATCC 12228]
gi|57636641|gb|AAW53429.1| ribosomal protein S6 [Staphylococcus epidermidis RP62A]
gi|242233248|gb|EES35560.1| 30S ribosomal protein S6 [Staphylococcus epidermidis W23144]
gi|251805180|gb|EES57837.1| 30S ribosomal protein S6 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296590|gb|EFA89102.1| ribosomal protein S6 [Staphylococcus epidermidis SK135]
gi|291318202|gb|EFE58596.1| 30S ribosomal protein S6 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399803|gb|EFV88051.1| ribosomal protein S6 [Staphylococcus epidermidis FRI909]
gi|329723864|gb|EGG60391.1| ribosomal protein S6 [Staphylococcus epidermidis VCU144]
gi|329734357|gb|EGG70671.1| ribosomal protein S6 [Staphylococcus epidermidis VCU028]
gi|329736064|gb|EGG72337.1| ribosomal protein S6 [Staphylococcus epidermidis VCU045]
Length = 98
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKALVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTL 91
+ I + + E +R +I+++++R + +
Sbjct: 61 NIVRIKTDNNKSTDEFQRLAKINDDIIRYIVI 92
>gi|331003442|ref|ZP_08326941.1| 30S ribosomal protein S6 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412488|gb|EGG91877.1| 30S ribosomal protein S6 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 95
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +L + + + + Q+ I GG V V++ G + AY I K ++ +Y F+
Sbjct: 5 YELALVLNGKLEDDARAEALEKVQNYITRFGGSVVNVDDWGKKRFAYDINKQKEGFYYFI 64
Query: 64 NIASPPAAI-HEMKRKMRIDENVLRSLTL 91
S +E++ +RI E+V+R L +
Sbjct: 65 KFQSENNNCPNELEANVRIMESVVRYLVV 93
>gi|269925894|ref|YP_003322517.1| ribosomal protein S6 [Thermobaculum terrenum ATCC BAA-798]
gi|269789554|gb|ACZ41695.1| ribosomal protein S6 [Thermobaculum terrenum ATCC BAA-798]
Length = 98
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIRKNRK 57
MK YE + ++ ++I + + + I +GGE + G R +AY IRK+ +
Sbjct: 1 MKDYELMVIIDPTTPDEEIPNVLDTIKQNIAAHGGEAGEPDASPPWGRRRLAYPIRKHNE 60
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+Y + P+ + R +++++ ++R L D
Sbjct: 61 GFYAVLRFRLSPSESRNLDRDLKLNDRIMRFLITRTD 97
>gi|156741508|ref|YP_001431637.1| 30S ribosomal protein S6 [Roseiflexus castenholzii DSM 13941]
gi|156232836|gb|ABU57619.1| ribosomal protein S6 [Roseiflexus castenholzii DSM 13941]
Length = 158
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 4 YEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRKN---- 55
YE +F++ I ++I + I + I GG + +N G R AY IR
Sbjct: 8 YELLFIIPPIRIGDEEIHNAIERVSQAITNLGGVMTAINHAPPWGRRKFAYPIRAYVEGE 67
Query: 56 ------RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ YYV MN + E++R ++++++VLR L LV++
Sbjct: 68 ASRRVFTEGYYVLMNFQMATDRVAELERLLKLNDSVLRYLLTLVET 113
>gi|291458691|ref|ZP_06598081.1| ribosomal protein S6 [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418608|gb|EFE92327.1| ribosomal protein S6 [Oribacterium sp. oral taxon 078 str. F0262]
Length = 126
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 1 MKLYEHVFLLRQDISSQQ-------IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR 53
M YE +L +S ++ IK+ I +Y ++ E + E G + +AY I+
Sbjct: 12 MSQYELCVVLSAKLSDEERAAAIEKIKEYISRYNGVVGEK------IEEWGKKRLAYEIQ 65
Query: 54 KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ YY F+ +E++ ++RI E V+R L +
Sbjct: 66 HMKEGYYYFIPFTGDRNTPNELENQVRIMEAVIRYLVV 103
>gi|297836915|ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332180|gb|EFH62598.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK KA
Sbjct: 104 LRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGE 163
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
Y+ + P +I ++ + D++++RS
Sbjct: 164 TNTYLDGIYLLFTYFTKPESITPLETVLTADDDIIRS 200
>gi|148657505|ref|YP_001277710.1| 30S ribosomal protein S6 [Roseiflexus sp. RS-1]
gi|148569615|gb|ABQ91760.1| SSU ribosomal protein S6P [Roseiflexus sp. RS-1]
Length = 159
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 4 YEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRKN---- 55
YE +F++ +S ++I++ I + I GG + N G R AY IR
Sbjct: 8 YELLFIIPPIRMSDEEIRNAIERVSQTITNLGGVITSTNHAPPWGRRKFAYPIRAYVEGE 67
Query: 56 ------RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ YYV M+ + E++R ++++++VLR L LV+ +P +
Sbjct: 68 ASRRVFTEGYYVLMHFQMAADRVAELERLLKLNDSVLRYLLTLVEMRGAAPAVV 121
>gi|167766037|ref|ZP_02438090.1| hypothetical protein CLOSS21_00530 [Clostridium sp. SS2/1]
gi|167712117|gb|EDS22696.1| hypothetical protein CLOSS21_00530 [Clostridium sp. SS2/1]
Length = 94
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +L I ++ + + Q++I G + V+E G + +AY I+K ++ YY F+
Sbjct: 3 YELALVLSAKIEDEERAAMVEKVQAMITTAGAAITNVDEWGKKQLAYEIQKMKEGYYYFI 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
E++ ++RI+E VLR L + D+
Sbjct: 63 QFEGETTVPAELEERLRIEETVLRFLCVKQDA 94
>gi|81427623|ref|YP_394620.1| 30S ribosomal protein S6 [Lactobacillus sakei subsp. sakei 23K]
gi|91207917|sp|Q38ZR8|RS6_LACSS RecName: Full=30S ribosomal protein S6
gi|78609262|emb|CAI54309.1| 30S Ribosomal protein S6 [Lactobacillus sakei subsp. sakei 23K]
Length = 98
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++ + + + ++ ++++NG EV + R +AY I + Y +
Sbjct: 6 YEVTYIISTTLDEESKTALVNRFDGILKDNGAEVVDSKDWSKRRLAYEINNQHEGIYHIV 65
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTL 91
N+ A A++E R +ID +LR + +
Sbjct: 66 NVLADNDEALNEFDRLAKIDGAILRHMIV 94
>gi|224053759|ref|XP_002297965.1| predicted protein [Populus trichocarpa]
gi|222845223|gb|EEE82770.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K KA
Sbjct: 78 LRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGE 137
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + P +I +++ + D++V+RS + V
Sbjct: 138 SNTYLDGIYLLFTYFTKPESIGILEQTLNTDDDVIRSSSFKV 179
>gi|317499406|ref|ZP_07957673.1| ribosomal protein S6 [Lachnospiraceae bacterium 5_1_63FAA]
gi|291559995|emb|CBL38795.1| SSU ribosomal protein S6P [butyrate-producing bacterium SSC/2]
gi|316893278|gb|EFV15493.1| ribosomal protein S6 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 95
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L I ++ + + Q++I G + V+E G + +AY I+K ++ YY
Sbjct: 1 MMKYELALVLSAKIEDEERAAMVEKVQAMITTAGAAITNVDEWGKKQLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ E++ ++RI+E VLR L + D+
Sbjct: 61 YFIQFEGETTVPAELEERLRIEETVLRFLCVKQDA 95
>gi|323336747|gb|EGA78011.1| Mrp17p [Saccharomyces cerevisiae Vin13]
gi|323347820|gb|EGA82084.1| Mrp17p [Saccharomyces cerevisiae Lalvin QA23]
Length = 131
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 3 LYEHVFLLR------QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR 56
LYE + L+R + ++++ TIG+ LI +N G VR + +G+R + ++K++
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGK---LIIQNRGVVRDIVPMGIRYLPKIMKKDQ 58
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+AY+ M S A E+ R ++ D V+RS + VD +Q
Sbjct: 59 EKHFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDLDKQ 104
>gi|326524554|dbj|BAK00660.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 97 LRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 156
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + P ++ ++ K+ D++V+RS + V
Sbjct: 157 LPFTYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKV 199
>gi|195952829|ref|YP_002121119.1| ribosomal protein S6 [Hydrogenobaculum sp. Y04AAS1]
gi|195932441|gb|ACG57141.1| ribosomal protein S6 [Hydrogenobaculum sp. Y04AAS1]
Length = 112
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE V + + ++ + + + + I + GG + + G + +AY+I Y
Sbjct: 10 RMYESVVVFKPTLTEDEYNTKLNEVKDFIAKKGGNIVHEEDWGTKNLAYKISGFGHGRYH 69
Query: 62 FMNIASPPAAI-HEMKRKMRIDENVLRSLTLL 92
F I S + + +++ +I+E+++R L +L
Sbjct: 70 FFKIFSTNSQLPNDLDFYYKINEDIIRWLNIL 101
>gi|326531910|dbj|BAK01331.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 97 LRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 156
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + P ++ ++ K+ D++V+RS + V
Sbjct: 157 LPFTYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKV 199
>gi|118783345|ref|XP_562993.2| AGAP003217-PA [Anopheles gambiae str. PEST]
gi|116129169|gb|EAL40731.2| AGAP003217-PA [Anopheles gambiae str. PEST]
Length = 150
Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ +S + T+ + + I + GG +R ++ LG + + ++ + R
Sbjct: 1 MPTYELSVILRQ-MSRPDMVATLKRTATAIFDKGGIIRKLDNLGTKPLPFKTSAHGLVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
Y +PP+AI ++ + D ++LR D +Q
Sbjct: 60 TGSYFVFKFDTPPSAIDDLDEEYGRDVDILRKRIYRADVSQQ 101
>gi|111226186|ref|YP_716980.1| 30S ribosomal protein S6 [Frankia alni ACN14a]
gi|111153718|emb|CAJ65476.1| 30S ribosomal protein S6 [Frankia alni ACN14a]
Length = 100
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 48/81 (59%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L D+ + + ++ QY ++++ GG V V+ G R +AY I K+ + Y +++ +
Sbjct: 1 MILDADLEERTVAPSLDQYLGVVRQGGGVVEKVDIWGRRRLAYEIAKSNEGIYAVIDLHA 60
Query: 68 PPAAIHEMKRKMRIDENVLRS 88
P + E+ R++ ++E+V+R+
Sbjct: 61 EPDVVAELDRQLVLNESVIRT 81
>gi|151941543|gb|EDN59906.1| mitochondrial ribosomal small subunit component [Saccharomyces
cerevisiae YJM789]
gi|259147830|emb|CAY81080.1| Mrp17p [Saccharomyces cerevisiae EC1118]
Length = 131
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 3 LYEHVFLLR------QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR 56
LYE + L+R + ++++ TIG+ LI +N G VR + +G+R + ++K++
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGK---LIIQNRGVVRDIVPMGIRYLPKIMKKDQ 58
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+AY+ M S A E+ R ++ D V+RS + VD +Q
Sbjct: 59 EKHFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDLDKQ 104
>gi|297565276|ref|YP_003684248.1| 30S ribosomal protein S6 [Meiothermus silvanus DSM 9946]
gi|296849725|gb|ADH62740.1| ribosomal protein S6 [Meiothermus silvanus DSM 9946]
Length = 108
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ QI Q Q+ ++ V+ ++E G R +AY I K+R+ Y+
Sbjct: 1 MPQYDLNVILSPNLDPAQIALEKDQIQAALERYKASVKHLDEWGSRRLAYPIEKDREGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + A + +++++ + +NV R + +
Sbjct: 61 LMYTVEMEKEAANPLEKELLLRDNVRRVMIV 91
>gi|167973252|ref|ZP_02555529.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167974088|ref|ZP_02556365.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975516|ref|ZP_02557793.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167988274|ref|ZP_02569945.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|168362595|ref|ZP_02695774.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|195867987|ref|ZP_03079983.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273520|ref|ZP_03206056.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554099|ref|YP_002285001.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550825|ref|ZP_03771774.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551074|ref|ZP_03772020.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|226705645|sp|B5ZC61|RS6_UREU1 RecName: Full=30S ribosomal protein S6
gi|171903342|gb|EDT49631.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184208983|gb|EDU06026.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188019152|gb|EDU57192.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188998246|gb|EDU67343.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659855|gb|EDX53235.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660321|gb|EDX53582.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198250040|gb|EDY74820.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541600|gb|ACI59829.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378889|gb|EEH01254.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379979|gb|EEH02341.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 160
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE + ++R D+ +Q + ++ ++ EV+ N G++ +AY I K + AY
Sbjct: 1 MAKYEIMLVVRGDLDQEQANKVANELKATLK--NTEVKENNYEGVQQLAYEINKLKTAYR 58
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQSPTLTIQRHDRDDR 112
YV+ + + I+E +R I++NVLR + + L + T+ ++ R+++
Sbjct: 59 YVYNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNAKKVQRNEK 112
>gi|159901473|ref|YP_001547720.1| 30S ribosomal protein S6 [Herpetosiphon aurantiacus ATCC 23779]
gi|159894512|gb|ABX07592.1| ribosomal protein S6 [Herpetosiphon aurantiacus ATCC 23779]
Length = 109
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 1 MKLYEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRKNR 56
++ YE + +LR D+ ++ + TI Q I+ GGEV + G R +AY I
Sbjct: 9 VRAYEMMTVLRPDLGGEEELNTTIETIQGYIKAQGGEVASTEQGAPWGRRKLAYPIDDYT 68
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ +Y + + E++R +++ +LR L +
Sbjct: 69 EGFYFLTHFTLNADRVTEVERHLKLAPQILRYLLI 103
>gi|315652550|ref|ZP_07905532.1| 30S ribosomal protein S6 [Eubacterium saburreum DSM 3986]
gi|315485193|gb|EFU75593.1| 30S ribosomal protein S6 [Eubacterium saburreum DSM 3986]
Length = 95
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +L + + + + Q+ I GG + V++ G + AY I K ++ +Y F+
Sbjct: 5 YELALVLNGKLEDDARAEALEKVQNYITRFGGSIVNVDDWGKKKFAYDINKQKEGFYYFI 64
Query: 64 NIASPPAAI-HEMKRKMRIDENVLRSLTL 91
S +E++ +RI E V+R L +
Sbjct: 65 KFQSEDNNCPNELEANVRIMEPVVRYLVV 93
>gi|6322850|ref|NP_012923.1| Mrp17p [Saccharomyces cerevisiae S288c]
gi|133127|sp|P28778|RT06_YEAST RecName: Full=37S ribosomal protein MRP17, mitochondrial; AltName:
Full=YmS16
gi|3974|emb|CAA41256.1| MRP17 [Saccharomyces cerevisiae]
gi|485975|emb|CAA81835.1| MRP17 [Saccharomyces cerevisiae]
gi|1515353|gb|AAB06941.1| Mrp17p [Saccharomyces cerevisiae]
gi|190409820|gb|EDV13085.1| ribosomal protein MRP17 [Saccharomyces cerevisiae RM11-1a]
gi|256271939|gb|EEU06960.1| Mrp17p [Saccharomyces cerevisiae JAY291]
gi|285813257|tpg|DAA09154.1| TPA: Mrp17p [Saccharomyces cerevisiae S288c]
gi|323304123|gb|EGA57901.1| Mrp17p [Saccharomyces cerevisiae FostersB]
gi|323332816|gb|EGA74221.1| Mrp17p [Saccharomyces cerevisiae AWRI796]
gi|323354129|gb|EGA85975.1| Mrp17p [Saccharomyces cerevisiae VL3]
Length = 131
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 3 LYEHVFLLR------QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR 56
LYE + L+R + ++++ TIG+ LI +N G VR + +G+R + ++K++
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGK---LIIQNRGVVRDIVPMGIRYLPKIMKKDQ 58
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+AY+ M S A E+ R ++ D V+RS + VD +Q
Sbjct: 59 EKHFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDLDKQ 104
>gi|196005861|ref|XP_002112797.1| hypothetical protein TRIADDRAFT_56309 [Trichoplax adhaerens]
gi|190584838|gb|EDV24907.1| hypothetical protein TRIADDRAFT_56309 [Trichoplax adhaerens]
Length = 186
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM-RTIAYRIRK----- 54
M YE ++R +Q + + + S I GG +R V LG R + YRIR
Sbjct: 1 MPRYEMPIIIRCMKQPEQYIEMLKRTASRIFNQGGVIRKVENLGTDRLLPYRIRAHTVWY 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+R +Y++F +PP + + ++++DE+V+R
Sbjct: 61 DRGSYFLFDFHGAPPI-VKRLHSELKLDEDVIR 92
>gi|15217660|ref|NP_176632.1| ribosomal protein S6 family protein [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor
gi|18252237|gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
Length = 207
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK KA
Sbjct: 100 LRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGE 159
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
Y+ + P +I ++ + D++++RS
Sbjct: 160 TNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRS 196
>gi|6633831|gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA----- 58
YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK KA
Sbjct: 127 YETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNT 186
Query: 59 ----YYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
Y+ + P +I ++ + D++++RS
Sbjct: 187 YLDGIYLLFTYFTKPESIVPLETVLTADDDIIRS 220
>gi|190571063|ref|YP_001975421.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357335|emb|CAQ54765.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 257
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY I K + +Y M I+ + + E +R+++++EN++R L++ V+
Sbjct: 188 GLLDFAYPINKMKSGHYCMMCISFTSSIMDEFERRVKLNENIIRHLSVRVN 238
>gi|260891625|ref|ZP_05902888.1| ribosomal protein S6 [Leptotrichia hofstadii F0254]
gi|260858635|gb|EEX73135.1| ribosomal protein S6 [Leptotrichia hofstadii F0254]
Length = 94
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNEL-GMRTIAYRIRKNRKAY 59
M+ YE +F+L ++ ++ + + ++ GG + E+ G R +AY I+K Y
Sbjct: 1 MRNYEIMFILSTQLTDEEKQAGV-EFVEKTLTAGGATEVKTEIWGDRKLAYPIKKKENGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
YV + E++ K+ I+E++L+ +
Sbjct: 60 YVLTTFQADGTQFTEIEAKLNINESLLKYM 89
>gi|213019584|ref|ZP_03335390.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995006|gb|EEB55648.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 264
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G+ AY I K + +Y M I+ + + E +R+++++EN++R L++ V+
Sbjct: 195 GLLDFAYPINKMKSGHYCMMCISFTSSIMDEFERRVKLNENIIRHLSVRVN 245
>gi|301167905|emb|CBW27490.1| putative 30S ribosomal protein S6 and S18 fusion [Bacteriovorax
marinus SJ]
Length = 207
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN-RKAYYV 61
+YE + + + + +Q ++ N GEV L ++ G + A K R +Y+
Sbjct: 2 IYELAIVAKTETTEEQRAALQAMVTEVVGANAGEVFLTDDWGNKHFAQATSKGVRTGHYL 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+ + A E++R+++I+E++L+ + + V + T
Sbjct: 62 YFIYSGNGAVNLEIERRLKINESILKKMIVKVGETAEQGT 101
>gi|156084298|ref|XP_001609632.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796884|gb|EDO06064.1| hypothetical protein BBOV_II001050 [Babesia bovis]
Length = 116
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE L + I+++ I + L N G + +LG+R ++R++K R
Sbjct: 1 MVFYESYLLFSKHITNEDIAALVSHISKLATINHGILLRTQDLGLRYTSHRVQKPRLGLF 60
Query: 60 ----YVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
Y ++ +A+ P + + + +E++LR +T
Sbjct: 61 WYGKYYYVALAANPKVVPGLHKLYNSNEHILRHMT 95
>gi|237736138|ref|ZP_04566619.1| SSU ribosomal protein S6P [Fusobacterium mortiferum ATCC 9817]
gi|229421691|gb|EEO36738.1| SSU ribosomal protein S6P [Fusobacterium mortiferum ATCC 9817]
Length = 94
Score = 37.4 bits (85), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F++ I + I + ++ G ++ + G R +AY I K + +Y
Sbjct: 1 MKKYEIMFIINPTILEEGRDAVIEKVTGVLTAAGANIQKSEKWGERKLAYPIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + +++ K+ I E VLR + +
Sbjct: 61 VLTTFEIDGTVLSDVELKLNIIEEVLRYIIV 91
>gi|13358118|ref|NP_078392.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971291|ref|ZP_02553568.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168281887|ref|ZP_02689554.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308036|ref|ZP_02690711.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762224|ref|YP_001752638.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|13959537|sp|Q9PPT6|RS6_UREPA RecName: Full=30S ribosomal protein S6
gi|189045593|sp|B1AJJ4|RS6_UREP2 RecName: Full=30S ribosomal protein S6
gi|11357046|pir||C82875 ribosomal protein S6 UU554 [imported] - Ureaplasma urealyticum
gi|6899560|gb|AAF30967.1|AE002154_3 ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827801|gb|ACA33063.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902615|gb|EDT48904.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675944|gb|EDT87849.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186701168|gb|EDU19450.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 160
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE + ++R D+ +Q + ++ ++ EV+ N G++ +AY I K + AY
Sbjct: 1 MAKYEIMLVVRGDLDQEQANKVANELKATLK--NTEVKENNYDGVQQLAYEINKLKTAYR 58
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL-LVDSHEQSPTLTIQRHDRDDR 112
YV+ + + I+E +R I++NVLR + + L + T+ ++ R+++
Sbjct: 59 YVYNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNTKKVQRNEK 112
>gi|316965515|gb|EFV50218.1| putative ribosomal protein S6 [Trichinella spiralis]
Length = 195
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY----YVFMN 64
+L+ D++S TI + + +NG + VN +G + + ++++K++ AY Y+ +N
Sbjct: 48 MLKADLAS-----TIKRCCVKLLDNGAVLTSVNSMGYKDLPFKMKKDQSAYITGSYILLN 102
Query: 65 IASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
A P ++ + R D +++ S V+S
Sbjct: 103 CALPFQKYKQLSGEFRRDSDIIHSYFKYVESQ 134
>gi|242624330|ref|YP_003002248.1| 30S ribosomal protein S6 [Aureoumbra lagunensis]
gi|239997438|gb|ACS36960.1| 30S ribosomal protein S6 [Aureoumbra lagunensis]
Length = 100
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGE---VRLVNELGMRTIAYRIRKNRKAYY 60
Y V L Q +S +I+ + Y ++++ G L N+ + Y I KN +
Sbjct: 10 YSCVLLFDQTLSKSEIQSSSYNYAKVLKKLGASKISAVLKND---YLLVYPINKNFDVKF 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
V ++ P AI R++R+DE+VLR
Sbjct: 67 VELSFLIAPQAIASYTRELRLDESVLR 93
>gi|255555639|ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 205
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA----- 58
YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K KA
Sbjct: 102 YETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNT 161
Query: 59 ----YYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
Y+ + P +I ++ + D++++RS
Sbjct: 162 YLDGIYLLFTYFTKPESIEMLEATLNTDDDIIRS 195
>gi|323308207|gb|EGA61456.1| Mrp17p [Saccharomyces cerevisiae FostersO]
Length = 131
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 3 LYEHVFLLR------QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR 56
LYE + L+R + ++++ TIG+ LI +N G VR + +G+R + ++K++
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGK---LIIQNRGVVRDIVPMGIRYLPKIMKKDQ 58
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+AY+ M S A E+ R ++ D V+RS + VD Q
Sbjct: 59 EKHFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDLDXQ 104
>gi|309792551|ref|ZP_07687013.1| ribosomal protein S6 [Oscillochloris trichoides DG6]
gi|308225365|gb|EFO79131.1| ribosomal protein S6 [Oscillochloris trichoides DG6]
Length = 133
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 17 QQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRKNR----------KAYYVFM 63
+ + T+ + I GGEV VN+ G R +AY IR+ + YY
Sbjct: 22 EGVTATVERISQSITNAGGEVAGVNQSPPWGRRKLAYPIREYASGEASRRNFTEGYYALF 81
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ A + E++R +++ ++V+R L LV+
Sbjct: 82 TFSLAAAKVAEVERTLKLTDSVMRHLITLVE 112
>gi|269114886|ref|YP_003302649.1| 30S ribosomal protein S6 [Mycoplasma hominis]
gi|268322511|emb|CAX37246.1| 30S ribosomal protein S6 [Mycoplasma hominis ATCC 23114]
Length = 146
Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 49 AYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ-SPTLTIQRH 107
AY I+K Y + + P + E+ RK+ ID++VLRSL + +DS + P ++
Sbjct: 43 AYPIKKLTHVNYFLITTKAEPHLMSELTRKLNIDKSVLRSLIINLDSEKGLKPRKVSKKF 102
Query: 108 DRD---DRNDRFPRDRNVDRKQHVSEEKPLS 135
++ +R ++ P +N + + SEEK ++
Sbjct: 103 NKRIPLNRENKKPYVKNNETSKDASEEKKVA 133
>gi|323341107|ref|ZP_08081355.1| 30S ribosomal protein S6 [Lactobacillus ruminis ATCC 25644]
gi|323091528|gb|EFZ34152.1| 30S ribosomal protein S6 [Lactobacillus ruminis ATCC 25644]
Length = 96
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ + D + ++ ++++ +G EV + R AY I + Y
Sbjct: 1 MTNYEITYIISPALDEAAKNDLVERFDNILKNDGAEVVDSKDWSKRRFAYEIGGFTEGVY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+NI + A AI+E R +I++ +LR + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIV 92
>gi|307128655|ref|YP_003880685.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri CARI]
gi|306483117|gb|ADM89987.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri CARI]
Length = 113
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+L +S +Q+K + +Y + + G++ +AY I+ YY
Sbjct: 3 YETLFILNPVLSEEQMKYCVSEYIDFFFKKKAKFLFQEHWGLKKLAYSIQNKINGYYHVF 62
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
I +++ K+R DE ++R ++ +D + +L I+R+
Sbjct: 63 YYKVNSQFISKLELKIRRDERIIRFFSVKID---KDASLYIKRN 103
>gi|116491825|ref|YP_803560.1| SSU ribosomal protein S6P [Pediococcus pentosaceus ATCC 25745]
gi|116101975|gb|ABJ67118.1| SSU ribosomal protein S6P [Pediococcus pentosaceus ATCC 25745]
Length = 94
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++ ++ + ++ ++ +NG E+ + R +AY I Y
Sbjct: 1 MKNYEITYIIAPNLDDAAKTALVDRFDKILTDNGAEIVDSKDWSKRRLAYEIGGFNDGIY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N+ AS A++E R +I + +LR + ++
Sbjct: 61 HIVNVKASDDEALNEFDRLSKIADGILRHMIVV 93
>gi|148269460|ref|YP_001243920.1| 30S ribosomal protein S6 [Thermotoga petrophila RKU-1]
gi|281411822|ref|YP_003345901.1| ribosomal protein S6 [Thermotoga naphthophila RKU-10]
gi|166227399|sp|A5IJH1|RS6_THEP1 RecName: Full=30S ribosomal protein S6
gi|147735004|gb|ABQ46344.1| SSU ribosomal protein S6P [Thermotoga petrophila RKU-1]
gi|281372925|gb|ADA66487.1| ribosomal protein S6 [Thermotoga naphthophila RKU-10]
Length = 128
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIEKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ R+ ++R T
Sbjct: 67 TVIYFRCDGQNLQELENFYRVTPEIIRWQTF 97
>gi|15643369|ref|NP_228413.1| 30S ribosomal protein S6 [Thermotoga maritima MSB8]
gi|7388218|sp|Q9WZ72|RS6_THEMA RecName: Full=30S ribosomal protein S6
gi|4981123|gb|AAD35688.1|AE001735_1 ribosomal protein S6 [Thermotoga maritima MSB8]
Length = 128
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ R+ ++R T
Sbjct: 67 TVIYFRCDGQNLQELENFYRVTPEIIRWQTF 97
>gi|294955934|ref|XP_002788753.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904294|gb|EER20549.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 136
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN---RK 57
M Y FL+ ++++ +++ + + + N G V +LG R + Y + K RK
Sbjct: 1 MPFYRTYFLVHNEVTNHELRCLVKEMARAVTNNRGVVFSFEDLGWRNLPYFLLKQGYRRK 60
Query: 58 AYY---VFMNIASPPAAIHEMKRKMRIDENVLR 87
+Y MN + PA+ + ++ R + +LR
Sbjct: 61 FFYGRWFTMNFGAHPASWNAIEEIGRHNTGILR 93
>gi|325679791|ref|ZP_08159365.1| ribosomal protein S6 [Ruminococcus albus 8]
gi|324108606|gb|EGC02848.1| ribosomal protein S6 [Ruminococcus albus 8]
Length = 96
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + Q + + + ++ +I+ N V L N G R +AY I + YV
Sbjct: 8 YEAMVIFSQKLDEEGVNALTTKFDDMIKANAENVEL-NVWGKRKLAYEINYESEGTYVLW 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+ S E++R + I + V+R L
Sbjct: 67 SFNSKTEFPAELERVLGITDGVIRFL 92
>gi|28572283|ref|NP_789063.1| 30S ribosomal protein S6 [Tropheryma whipplei TW08/27]
gi|61216305|sp|Q83IC0|RS6_TROW8 RecName: Full=30S ribosomal protein S6
gi|28410414|emb|CAD66800.1| 30s ribosomal protein S6 [Tropheryma whipplei TW08/27]
Length = 100
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
++ G V+ ++ LG+R AY I+ V + + + +I E+ R+MR+ E+V+R+
Sbjct: 34 VEPEGVTVKHLDVLGVRKFAYEIKGRNDGVCVVVRLLANAGSIAEIGRQMRLTEDVIRT 92
>gi|55670467|pdb|1VMB|A Chain A, Crystal Structure Of 30s Ribosomal Protein S6 (Tm0603)
From Thermotoga Maritima At 1.70 A Resolution
Length = 140
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 19 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ R+ ++R T
Sbjct: 79 TVIYFRCDGQNLQELENFYRVTPEIIRWQTF 109
>gi|115378657|ref|ZP_01465807.1| ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|310823078|ref|YP_003955436.1| 30S ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|115364323|gb|EAU63408.1| ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|309396150|gb|ADO73609.1| 30S ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
Length = 155
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE +FL++ D++ + + + ++ GG++ G + Y I K +A Y
Sbjct: 10 LREYETIFLVKPDLTDDNVDRLKERVRGIVNREGGKLIRFTVWGKKKTLYPIAKQPRAIY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + E++R +R + V R L++
Sbjct: 70 VHTHFLGDSKLVAEVERNLRNIDEVTRYLSV 100
>gi|255713424|ref|XP_002552994.1| KLTH0D06270p [Lachancea thermotolerans]
gi|238934374|emb|CAR22556.1| KLTH0D06270p [Lachancea thermotolerans]
Length = 142
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 3 LYEHVFLLR------QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR 56
LYE V ++R + ++++ TIG+ LI +N G VR V +G + + I+K++
Sbjct: 15 LYELVSIVRVVNPLAANTEAKELATTIGK---LIIQNRGVVRRVLPVGNKLLPKIIKKDQ 71
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ Y+ M S A E+ R ++ D V+RS + VD+ +Q
Sbjct: 72 EQHFQGYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDTSKQ 117
>gi|28476115|gb|AAO44205.1| 30S ribosomal protein S6 [Tropheryma whipplei str. Twist]
Length = 153
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
++ G V+ ++ LG+R AY I+ V + + +I E+ R+MR+ E+V+R+
Sbjct: 87 VEPEGVTVKHLDVLGIRKFAYEIKGRNDGVCVVVRFLANAGSIAEIGRQMRLTEDVIRT 145
>gi|222099033|ref|YP_002533601.1| 30S ribosomal protein S6 [Thermotoga neapolitana DSM 4359]
gi|254765461|sp|B9KB39|RS6_THENN RecName: Full=30S ribosomal protein S6
gi|221571423|gb|ACM22235.1| 30S ribosomal protein S6 [Thermotoga neapolitana DSM 4359]
Length = 127
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEEREKLVERVKGIIEERVKGKIDKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ RI ++R T
Sbjct: 67 TVIYFRCDGQHLQELENFYRITPEIIRWQTF 97
>gi|70945193|ref|XP_742442.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521430|emb|CAH75062.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 114
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIVSINDLGWRKFAFCIKKPKVGTF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSL 89
F + S +I ++ + +LR L
Sbjct: 61 YFGRFYCITFYSNSKSIRDLNELFHSNTYILRFL 94
>gi|31544819|ref|NP_853397.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(low)]
gi|61215679|sp|Q7NAM1|RS6_MYCGA RecName: Full=30S ribosomal protein S6
gi|31541665|gb|AAP56965.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(low)]
gi|284930893|gb|ADC30832.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(high)]
gi|284931649|gb|ADC31587.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. F]
Length = 191
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 35 GEVRLVNE-LGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
G+ + E LG +T+ Y I+K A+Y + + S ++HE KR I +VLR L L
Sbjct: 31 GKTEITEEYLGQKTLEYPIKKEVTAHYFNLFLTSDGKSVHEYKRLASIRTDVLRILIL 88
>gi|170288134|ref|YP_001738372.1| ribosomal protein S6 [Thermotoga sp. RQ2]
gi|226695296|sp|B1L8K7|RS6_THESQ RecName: Full=30S ribosomal protein S6
gi|170175637|gb|ACB08689.1| ribosomal protein S6 [Thermotoga sp. RQ2]
Length = 128
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEEREKLVERVKGIIEERVKGKIDKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ RI ++R T
Sbjct: 67 TVIYFRCDGQHLQELENFYRITPEIIRWQTF 97
>gi|225426247|ref|XP_002264340.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 199
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
++ YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K KA
Sbjct: 93 LRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE 152
Query: 59 -------YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y+ + P ++ ++ + D++V+RS +
Sbjct: 153 SNTYLDGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSF 192
>gi|317057127|ref|YP_004105594.1| 30S ribosomal protein S6 [Ruminococcus albus 7]
gi|315449396|gb|ADU22960.1| ribosomal protein S6 [Ruminococcus albus 7]
Length = 96
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + + Q + + + ++ +I+ N V L N G R +AY I + YV
Sbjct: 8 YEAMVIFSQKLDEEGVNALTTKFDDMIKANAENVEL-NVWGKRKLAYAINYETEGTYVLW 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+ S E++R + I + V+R L
Sbjct: 67 SFNSKTEFPAELERVLGITDGVIRFL 92
>gi|161486580|ref|NP_787236.2| 30S ribosomal protein S6 [Tropheryma whipplei str. Twist]
Length = 95
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
++ G V+ ++ LG+R AY I+ V + + +I E+ R+MR+ E+V+R+
Sbjct: 29 VEPEGVTVKHLDVLGIRKFAYEIKGRNDGVCVVVRFLANAGSIAEIGRQMRLTEDVIRTK 88
Query: 90 TLLVD 94
L V
Sbjct: 89 LLRVG 93
>gi|61216303|sp|Q83GX2|RS6_TROWT RecName: Full=30S ribosomal protein S6
Length = 100
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
++ G V+ ++ LG+R AY I+ V + + +I E+ R+MR+ E+V+R+
Sbjct: 34 VEPEGVTVKHLDVLGIRKFAYEIKGRNDGVCVVVRFLANAGSIAEIGRQMRLTEDVIRT 92
>gi|124810148|ref|XP_001348780.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
gi|23497680|gb|AAN37219.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
Length = 120
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE L + I +++ + + +I ++ G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYISLNKHIKKDDVRNLMKNFNYIINKHNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F + S +I ++ + VLR L +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTYVLRFLNM 96
>gi|70939475|ref|XP_740274.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56517880|emb|CAH81584.1| hypothetical protein PC000709.04.0 [Plasmodium chabaudi chabaudi]
Length = 114
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSL 89
F + S +I ++ + +LR L
Sbjct: 61 YFGRFYCITFYSNSKSIRDLNELFHSNTYILRFL 94
>gi|30468113|ref|NP_849000.1| ribosomal protein S6 [Cyanidioschyzon merolae strain 10D]
gi|68052983|sp|Q85G29|RR6_CYAME RecName: Full=30S ribosomal protein S6, chloroplastic
gi|30409213|dbj|BAC76162.1| 30S ribosomal protein S6 [Cyanidioschyzon merolae strain 10D]
Length = 99
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++L+R D++ ++IK I +++E+ V+L N R +AY+I K + +YV M
Sbjct: 12 YELMWLIRPDLNQEEIKKEIEAVMKVLEESR-RVQL-NGKTTRKLAYKIGKYEEGHYVQM 69
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ ++++ ++++E LR + L
Sbjct: 70 EFDGYGRIVKKLEKYLQVNEKGLRYMIL 97
>gi|115456525|ref|NP_001051863.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|41469637|gb|AAS07360.1| putative plastid ribosomal protein S6 precursor [Oryza sativa
Japonica Group]
gi|108712038|gb|ABF99833.1| ribosomal protein S6 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550334|dbj|BAF13777.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|215692368|dbj|BAG87788.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704476|dbj|BAG93910.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 111 LRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 170
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 171 LPSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKV 213
>gi|125588601|gb|EAZ29265.1| hypothetical protein OsJ_13329 [Oryza sativa Japonica Group]
Length = 215
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 107 LRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 166
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 167 LPSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKV 209
>gi|125546402|gb|EAY92541.1| hypothetical protein OsI_14280 [Oryza sativa Indica Group]
Length = 215
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 107 LRQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 166
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 167 LPSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKV 209
>gi|326802628|ref|YP_004320446.1| ribosomal protein S6 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651205|gb|AEA01388.1| ribosomal protein S6 [Aerococcus urinae ACS-120-V-Col10a]
Length = 100
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R +I S+ + + ++ ++ NG + + AY I R+ Y +
Sbjct: 8 YEVLYIIRPNIDSEAKEALVKRFDDILTSNGTTITKSEDWQKLRFAYEINDFREGVYHLI 67
Query: 64 NI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
A A I E R +I++++LR + V++
Sbjct: 68 ECEAEDAAGIDEFNRLAKINDDILRHMITKVEA 100
>gi|293331817|ref|NP_001168663.1| hypothetical protein LOC100382451 [Zea mays]
gi|223950019|gb|ACN29093.1| unknown [Zea mays]
Length = 222
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 114 LRQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 173
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ K+ D++V+RS + V
Sbjct: 174 LPSTYYDGIYLLITYFTKPESMDALQLKLNADDDVIRSTSFKV 216
>gi|71027351|ref|XP_763319.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350272|gb|EAN31036.1| hypothetical protein TP03_0301 [Theileria parva]
Length = 131
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 7 VFLL-RQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNI 65
+FLL D ++IK + I++ G E + LG++++ I+K +A+++ + +
Sbjct: 4 IFLLFYCDRPVEKIKQQFITVLNKIKQIGVENIHIYNLGLKSLVRPIKKQYQAHFLLVKL 63
Query: 66 ASPPAAIHEMKRKMRIDENVLRSLTL 91
S P+ I+ ++ K +E VLR L L
Sbjct: 64 CSYPSIINLLRLKFLQEEGVLRILLL 89
>gi|114777952|ref|ZP_01452866.1| Ribosomal protein S6 [Mariprofundus ferrooxydans PV-1]
gi|114551739|gb|EAU54291.1| Ribosomal protein S6 [Mariprofundus ferrooxydans PV-1]
Length = 135
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
++++GG + G R +AY I ++ YV + P A+ ++ + ++E ++RS
Sbjct: 9 VEKSGGRIVKRENWGSRPLAYSIANRKRGNYVLLVTDGEPEALKTLEHAISLEERIIRSQ 68
Query: 90 TLLVD--SHEQSP 100
T+ + S E SP
Sbjct: 69 TVKLTELSDEPSP 81
>gi|156100043|ref|XP_001615749.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148804623|gb|EDL46022.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 114
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK 54
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKK 54
>gi|160902034|ref|YP_001567615.1| ribosomal protein S6 [Petrotoga mobilis SJ95]
gi|160359678|gb|ABX31292.1| ribosomal protein S6 [Petrotoga mobilis SJ95]
Length = 125
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNR--KA 58
+ YE +F++R DI ++ + + I+ GEV G+R +AYR +K + +
Sbjct: 4 RYYETMFVVRTDIPEEERNALAEKVRGWIEGQLEGEVEEFTRWGVRKLAYRTQKGKFTEG 63
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y ++ + P I+++ ++++ + R T+
Sbjct: 64 DYTYIIYKADPEKINQLDDLFKVNQEIFRFQTI 96
>gi|282855811|ref|ZP_06265113.1| ribosomal protein S6 [Pyramidobacter piscolens W5455]
gi|282586325|gb|EFB91591.1| ribosomal protein S6 [Pyramidobacter piscolens W5455]
Length = 95
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 27 QSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVL 86
+ L+ + GGEV + G R +AY I+K + YV + P + E+ R + + V+
Sbjct: 26 EELVVKLGGEVAKTDVWGKRRLAYEIKKLTEGIYVVIEFKIEPDQLKELGRVLSLRPLVV 85
Query: 87 RSLTLLVDS 95
R L + D
Sbjct: 86 RHLNVAADG 94
>gi|116332688|ref|YP_794215.1| 30S ribosomal protein S6 [Lactobacillus brevis ATCC 367]
gi|122270616|sp|Q03UD8|RS6_LACBA RecName: Full=30S ribosomal protein S6
gi|116098035|gb|ABJ63184.1| SSU ribosomal protein S6P [Lactobacillus brevis ATCC 367]
Length = 98
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYYVF 62
YE +++R D+ + ++ ++ +NG E+ + R AY I N Y+V
Sbjct: 6 YEITYIIRPDLDDAAKTALVERFDKILTDNGAELINSKDWSKRRFAYEIGGFNEGIYHVI 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
A+ ++E R +I++++LR + +
Sbjct: 66 TLNATDDKGLNEFDRLAKINDSILRHMIV 94
>gi|221059165|ref|XP_002260228.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810301|emb|CAQ41495.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 114
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK 54
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKK 54
>gi|294102405|ref|YP_003554263.1| ribosomal protein S6 [Aminobacterium colombiense DSM 12261]
gi|293617385|gb|ADE57539.1| ribosomal protein S6 [Aminobacterium colombiense DSM 12261]
Length = 94
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 34 GGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
GGE+ + G R +AY + ++ +Y M P I E++R + + +NV R + + +
Sbjct: 32 GGELSKTDIWGKRKLAYPVNEHTDGFYAVMTFKLNPDEITELERLLSLRQNVHRQMIVRL 91
Query: 94 D 94
D
Sbjct: 92 D 92
>gi|108760551|ref|YP_633232.1| 30S ribosomal protein S6 [Myxococcus xanthus DK 1622]
gi|108464431|gb|ABF89616.1| ribosomal protein S6 [Myxococcus xanthus DK 1622]
Length = 158
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
++ YE +FL++ D++ + + + ++ GG+V G + + + K +A Y
Sbjct: 10 LREYETIFLVKPDLTDDNVDKLKERVRGIVSREGGKVIRFTVWGKKKTLFPVAKQPRAIY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + E++R +R + V R +++
Sbjct: 70 VHTHFLGGAKLVAEIERNLRNLDEVTRYISV 100
>gi|254233452|ref|ZP_04926778.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis C]
gi|124603245|gb|EAY61520.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis C]
Length = 43
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 54 KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
K+ + YV +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 1 KHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH 43
>gi|169848799|ref|XP_001831104.1| hypothetical protein CC1G_03995 [Coprinopsis cinerea okayama7#130]
gi|116507831|gb|EAU90726.1| hypothetical protein CC1G_03995 [Coprinopsis cinerea okayama7#130]
Length = 856
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 9 LLRQDISSQQIKDTIGQYQSLI--QENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
L+ Q I I++ G Y ++ + G +R++N G+R +R N+ + N
Sbjct: 238 LMAQQIEESGIEELFGDYAKIVYPGDGGDPMRVLNTKGVRRARLVVRLNKYGEPIMSNPD 297
Query: 67 SPPAAIHEMKRKMRID 82
+PP I + R+ RID
Sbjct: 298 NPPPGISSV-RQWRID 312
>gi|116327956|ref|YP_797676.1| 30S ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330837|ref|YP_800555.1| 30S ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281409|sp|Q04TH3|RS6_LEPBJ RecName: Full=30S ribosomal protein S6
gi|122284252|sp|Q052K2|RS6_LEPBL RecName: Full=30S ribosomal protein S6
gi|116120700|gb|ABJ78743.1| 30S Ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124526|gb|ABJ75797.1| 30S Ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 91
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 1 MKLYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M+ YE + R ++++ +++DT+ ++ + + + G R + + I+ +
Sbjct: 1 MRNYELTTITRVSSREVTKSEVQDTLNKFSVSVTAD-------EDWGQRKLWHPIKHEEQ 53
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++ P+AI +++++ I++N+LRS+ + +D
Sbjct: 54 GIFHHYKCSAEPSAIEKVEKEFLINQNILRSMVVRLDG 91
>gi|11467411|ref|NP_043268.1| ribosomal protein S6 [Cyanophora paradoxa]
gi|1350896|sp|P48134|RR6_CYAPA RecName: Full=30S ribosomal protein S6, cyanelle
gi|1016212|gb|AAA81299.1| ribosomal protein S6 [Cyanophora paradoxa]
Length = 104
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y ++L+ ++ ++I I YQ L+ +NG E ++ G +AY I K Y +
Sbjct: 15 YRTTYILKPSLTEEEITKEIEDYQKLLIDNGAEDIIIENTGKCRLAYLINKQNDGIYFQI 74
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ ++R+MR+ N LR T V
Sbjct: 75 TYRGANTLVNILQRRMRLSINTLRYQTFKV 104
>gi|302339370|ref|YP_003804576.1| ribosomal protein S6 [Spirochaeta smaragdinae DSM 11293]
gi|301636555|gb|ADK81982.1| ribosomal protein S6 [Spirochaeta smaragdinae DSM 11293]
Length = 93
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
+++ G ++ + G+R AY I+K ++ Y+++ PA + +++R + ++VL+ L
Sbjct: 28 LEKAGATIKSQEDKGIREFAYPIKKEKRGRYLYLETELNPAKVIDLERAFLLSDSVLKFL 87
>gi|168008110|ref|XP_001756750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691988|gb|EDQ78347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQY-QSLIQENGGEVRLVNELGMRTIAYRIR-KNRKAY-- 59
YE + +LR DI+ +Q +Y +S+I G +V + N GM+ +AY I+ KN +
Sbjct: 18 YETMTVLRPDITEEQRLALTQRYEESIIAGGGLDVEMFNR-GMQPLAYNIKTKNMAGFAN 76
Query: 60 ------YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y+ + P + ++ ++ D++++RS T
Sbjct: 77 RYLDGIYLLFTYVTKPESQKAIQDRLNRDDDIIRSTTF 114
>gi|303287432|ref|XP_003063005.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455641|gb|EEH52944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 200
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ ++ + Q+ D + + + + GG + + G +T+AY+IRK + +
Sbjct: 1 MVLYDMFIAVKSTVPRSQMADVLRKMGHRVLDAGGVITDITSFGTQTLAYQIRKQGQGHL 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL----LVDSHEQSPTLTI 104
+ S A+ + R + R + + S EQ+PT +
Sbjct: 61 EVRVVGSLGASNRRVARSRVVSARASRPNRIERPRFIVSREQNPTYVV 108
>gi|203284040|ref|YP_002221780.1| 30S ribosomal protein S6 [Borrelia duttonii Ly]
gi|226703424|sp|B5RLI9|RS6_BORDL RecName: Full=30S ribosomal protein S6
gi|201083483|gb|ACH93074.1| 30S ribosomal protein S6 [Borrelia duttonii Ly]
Length = 134
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQE------NGGEVRLV-NELGMRTIAYRIR 53
+K YE FL R S+++ +Y+S ++E G V V N +G R + Y +R
Sbjct: 2 IKKYEGCFLFR----SEEL-----EYKSALEEVKKQLVAFGAVDFVENSIGERALEYPVR 52
Query: 54 KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
K + Y + + E++ ++++ +N+LR + L+ + + S +R+ R+ R+
Sbjct: 53 KQLRGRYEIIEFKMASDNLRELEAQLKLIKNLLRYMILVKINRKVSVKKVKRRNFREYRD 112
Query: 114 DR------FPRDRNVD 123
+R P + NVD
Sbjct: 113 NRDIKEKEQPSESNVD 128
>gi|82752988|ref|XP_727496.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483367|gb|EAA19061.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 118
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 61 VF 62
F
Sbjct: 61 YF 62
>gi|57286811|gb|AAW38905.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus COL]
gi|298693703|gb|ADI96925.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ED133]
Length = 92
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R +I K + ++ ++ G EV + G R +AY I + +Y + +
Sbjct: 1 MYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFYNIVRVK 60
Query: 67 SP-PAAIHEMKRKMRIDENVLRSLTL 91
S A E +R +I ++++R + +
Sbjct: 61 SDNNKATDEFQRLAKISDDIIRYMVI 86
>gi|187917993|ref|YP_001883556.1| 30S ribosomal protein S6 [Borrelia hermsii DAH]
gi|226703425|sp|B2S1U9|RS6_BORHD RecName: Full=30S ribosomal protein S6
gi|119860841|gb|AAX16636.1| SSU ribosomal protein S6P [Borrelia hermsii DAH]
Length = 131
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 1 MKLYEHVFLLRQD-----ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN 55
+K YE FL + + ++ + +K + + N + + N LG R + Y IRK
Sbjct: 2 IKKYEACFLFKSEELEYKVALEDVKKQLTAF------NASDF-VENSLGERALEYSIRKQ 54
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ Y + + + E++ ++R+ +N+LR + L+ + + + +R+ R+ +++R
Sbjct: 55 SRGRYEIIEFKMDSSNLKELEVQLRLIKNLLRYMILVKINKKVNVKKVKRRNFREFKDNR 114
Query: 116 FPRDRNV 122
R++ +
Sbjct: 115 DTREKEL 121
>gi|26553568|ref|NP_757502.1| 30S ribosomal protein S6 [Mycoplasma penetrans HF-2]
gi|32171557|sp|Q8EWT7|RS6_MYCPE RecName: Full=30S ribosomal protein S6
gi|26453574|dbj|BAC43906.1| ribosomal protein S6 [Mycoplasma penetrans HF-2]
Length = 145
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 40 VNELGMRTIAYRI-RKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ ++G++ +AY I +K+R YY+F PA+I E +R + + VLR L +
Sbjct: 38 LEKMGLKDLAYPINKKSRGYYYLFNFYNEDPASIQEFRRVTLLKKEVLRHLII 90
>gi|168062700|ref|XP_001783316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665168|gb|EDQ51861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGG-EVRLVNELGMRTIAYRIR-KNRKAY-- 59
YE + +LR DI+ Q +Y+ I GG +V + N GM+ +AY I+ KN +
Sbjct: 18 YETMTVLRPDITEDQRLALTQRYEEAIIAGGGLDVEMFNR-GMQPLAYNIKTKNMAGFAN 76
Query: 60 ------YVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y+ + P + ++ ++ D++++RS T
Sbjct: 77 RYLDGIYLLFTYVTKPESQKTIQDRLNRDDDIIRSTTF 114
>gi|189218767|ref|YP_001939408.1| ribosomal protein S6 [Methylacidiphilum infernorum V4]
gi|189185625|gb|ACD82810.1| Ribosomal protein S6 [Methylacidiphilum infernorum V4]
Length = 111
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y+ +++L +K+ I Q + I + GG+V + ++ R K YY+ M
Sbjct: 5 YDALYILDIQAKEDSLKEMIEQIEKTITQLGGKVISLQKMDKRKFERVATKIDSGYYLNM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
I P A+ E++ K++ + +V R
Sbjct: 65 GIELSPYALKELEAKLKNNPSVFRQF 90
>gi|269118804|ref|YP_003306981.1| ribosomal protein S6 [Sebaldella termitidis ATCC 33386]
gi|268612682|gb|ACZ07050.1| ribosomal protein S6 [Sebaldella termitidis ATCC 33386]
Length = 94
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 44/89 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ ++ + I + ++ +G + G R +AY I K YY
Sbjct: 1 MRNYEIMFIVSTQLTEEEKQTGIKFVEDTLKASGADSVKTEIWGDRKLAYPINKKDNGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V + E++ K+ I+E++++ +
Sbjct: 61 VLTTFQMDGTRLTEVEGKLNINESLMKYM 89
>gi|291221349|ref|XP_002730679.1| PREDICTED: mitochondrial ribosomal protein S6-like [Saccoglossus
kowalevskii]
Length = 122
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE + R S+ I +S+I E GG++R + LG + + +++ + + Y
Sbjct: 1 MPRYEMALIFRALNRSETISAMKRVGESVI-ERGGQIRTIENLGEKDLPFKMVAHSQGYR 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLR 87
Y+ M P+ + M +R D +V+R
Sbjct: 60 RGRYIVMEFDGKPSIVSSMVEYLRRDVDVIR 90
>gi|68070171|ref|XP_676997.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496937|emb|CAH99130.1| conserved hypothetical protein [Plasmodium berghei]
Length = 114
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE L + I +K+ + + + + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIANKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
F + S +I ++ + +LR L +
Sbjct: 61 YFGRFYCITFYSNSKSIKDLNELFHSNTYILRFLNV 96
>gi|256848500|ref|ZP_05553942.1| ribosomal protein S6 [Lactobacillus coleohominis 101-4-CHN]
gi|256714767|gb|EEU29746.1| ribosomal protein S6 [Lactobacillus coleohominis 101-4-CHN]
Length = 97
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R DI + ++ ++ +NG V + R AY I K + Y +
Sbjct: 6 YEITYIIRPDIDESAKSALVERFDKVLSDNGATVVDSKDWSTRRFAYPIDKYTEGTYHVI 65
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTL 91
N+ + ++E R + +++LR + +
Sbjct: 66 NVTTDNDQPLNEFDRLSKFSDDILRHMIV 94
>gi|310779634|ref|YP_003967967.1| SSU ribosomal protein S6P [Ilyobacter polytropus DSM 2926]
gi|309748957|gb|ADO83619.1| SSU ribosomal protein S6P [Ilyobacter polytropus DSM 2926]
Length = 92
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/91 (18%), Positives = 44/91 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + + + ++++ G + G R +AY I K + YY
Sbjct: 1 MRNYEIMYIINPTVMDDARTEVMAKVENILTAAGATNVKAEKWGERKLAYPIEKKQSGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + ++++K+ I E+V+R + +
Sbjct: 61 ILTTFEMDGTKLADVEKKLNITESVMRYIIV 91
>gi|307069611|ref|YP_003878088.1| putative 30S ribosomal subunit protein S6 [Candidatus Zinderia
insecticola CARI]
gi|306482871|gb|ADM89742.1| putative 30S ribosomal subunit protein S6 [Candidatus Zinderia
insecticola CARI]
Length = 74
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 34 GGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPP 69
GG++ V +LG + ++Y+I+K + AYY+ I P
Sbjct: 34 GGKILYVKKLGYKILSYKIKKKKNAYYLCFYILLNP 69
>gi|307719001|ref|YP_003874533.1| hypothetical protein STHERM_c13190 [Spirochaeta thermophila DSM
6192]
gi|306532726|gb|ADN02260.1| hypothetical protein STHERM_c13190 [Spirochaeta thermophila DSM
6192]
Length = 114
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 1 MKLYEHVFLLR--QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
++ YE V + R Q++ +Q + T+ ++ ++ +++ ++G R +AY+I+K +
Sbjct: 21 VRTYELVCVFRSEQELYAQGKQKTV----EVLSKHEAQIQKEEDMGERQLAYQIKKQTRG 76
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+Y + P I +++ ++ VLR L VD+
Sbjct: 77 HYYVWVFNAKPEIISKLEHDLKYIPEVLRFLVTRVDT 113
>gi|150020531|ref|YP_001305885.1| 30S ribosomal protein S6 [Thermosipho melanesiensis BI429]
gi|167011249|sp|A6LKP9|RS6_THEM4 RecName: Full=30S ribosomal protein S6
gi|149793052|gb|ABR30500.1| ribosomal protein S6 [Thermosipho melanesiensis BI429]
Length = 119
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQ--YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
M++YE +F+++ DI+ ++ ++ I Q L ++ G V V+ G+R AY ++K +A
Sbjct: 1 MRIYETMFIIKPDIAEEE-REKIAQGVVDYLKEKLGAHVDNVDRWGIRKTAYPLKKYNEA 59
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
Y + I ++ R+ LR T
Sbjct: 60 DYTIVYFRGEGLDITVLESYFRVRPEFLRWQTF 92
>gi|159489677|ref|XP_001702823.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
gi|158271040|gb|EDO96868.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
Length = 122
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LYE + L + + ++ I L+ NGG V + G + +AY +R K
Sbjct: 1 MPLYELLMLAKPSLPRAEMVALIKGLGDLVYRNGGFVTSLKSFGDQHLAYDLRRPFEKYD 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+A+ M+ S AI + + ++ VLR
Sbjct: 61 RAHIWQMDFVSSVDAIKPLDHGLHVNNTVLR 91
>gi|302024438|ref|ZP_07249649.1| 30S ribosomal protein S6 [Streptococcus suis 05HAS68]
Length = 100
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNI-A 66
+LL + + + + ++ S++ +NG + R +AY I+ R+ Y +N+ A
Sbjct: 12 YLLVRRLQKEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYHIVNVEA 71
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ A+ E R +I+ ++LR + + +D+
Sbjct: 72 NNDEALKEFDRLSKINGDILRHMIVKLDA 100
>gi|315186487|gb|EFU20247.1| ribosomal protein S6 [Spirochaeta thermophila DSM 6578]
Length = 105
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 1 MKLYEHVFLLR--QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
++ YE V + R Q++ +Q + T+ ++ ++ +++ ++G R +AY+I+K +
Sbjct: 12 VRTYELVCVFRSEQELYTQGKQKTV----EVLNKHETQIQKEEDMGERQLAYQIKKQTRG 67
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+Y + P I +++ ++ VLR L VD+
Sbjct: 68 HYYVWVFNAKPEIISKLEHDLKYIPEVLRFLVTRVDT 104
>gi|242037445|ref|XP_002466117.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
gi|241919971|gb|EER93115.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
Length = 215
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
++ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 107 LRQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTG 166
Query: 58 -------AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 167 LPSTYYDGIYLLITYFTKPESMDALQLRLNADDDVIRSTSFKV 209
>gi|146319488|ref|YP_001199200.1| ribosomal protein S6 [Streptococcus suis 05ZYH33]
gi|145690294|gb|ABP90800.1| Ribosomal protein S6 [Streptococcus suis 05ZYH33]
Length = 83
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 23 IGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNI-ASPPAAIHEMKRKMRI 81
+ ++ S++ +NG + R +AY I+ R+ Y +N+ A+ A+ E R +I
Sbjct: 10 VARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYHIVNVEANNDEALKEFDRLSKI 69
Query: 82 DENVLRSLTLLVDS 95
+ ++LR + + +D+
Sbjct: 70 NGDILRHMIVKLDA 83
>gi|270289886|ref|ZP_06196112.1| 30S ribosomal protein S6 [Pediococcus acidilactici 7_4]
gi|304385861|ref|ZP_07368205.1| 30S ribosomal protein S6 [Pediococcus acidilactici DSM 20284]
gi|270281423|gb|EFA27255.1| 30S ribosomal protein S6 [Pediococcus acidilactici 7_4]
gi|304328365|gb|EFL95587.1| 30S ribosomal protein S6 [Pediococcus acidilactici DSM 20284]
Length = 95
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++ ++ + ++ ++ +NG E+ + R AY I + Y
Sbjct: 3 KNYEITYIIAPNLDDAAKTALVERFDKILTDNGAEIVDSKDWSKRRFAYEIGGFNEGIYH 62
Query: 62 FMNI-ASPPAAIHEMKRKMRIDENVLRSLTLL 92
+NI AS A++E R +I + +LR + ++
Sbjct: 63 VVNIKASDDKALNEFDRLSKIADGILRHMIVV 94
>gi|90960997|ref|YP_534913.1| 30S ribosomal protein S6 [Lactobacillus salivarius UCC118]
gi|301300466|ref|ZP_07206665.1| ribosomal protein S6 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90820191|gb|ABD98830.1| SSU ribosomal protein S6P [Lactobacillus salivarius UCC118]
gi|300851913|gb|EFK79598.1| ribosomal protein S6 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 96
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ I + ++ ++++ +G E+ + R AY I + Y
Sbjct: 1 MTNYEITYIISPAIDEAAKTALVERFDNILKNDGAEIVDSKDWSKRRFAYEIGGFSEGIY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+NI + A AI+E R +I++ +LR + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIV 92
>gi|229829469|ref|ZP_04455538.1| hypothetical protein GCWU000342_01559 [Shuttleworthia satelles
DSM 14600]
gi|229791900|gb|EEP28014.1| hypothetical protein GCWU000342_01559 [Shuttleworthia satelles
DSM 14600]
Length = 96
Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 1 MAKYELALVVNAKIEDDARAAVVEKAKGYITRAGGTVTDVEEKGKQKLAYEIQNMGEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
++ + + +++ +RI + VLR L
Sbjct: 61 YYIQFEAETSVPAQLEGDIRIMDYVLRFL 89
>gi|108773399|ref|YP_635917.1| cell division protein [Helicosporidium sp. ex Simulium jonesii]
gi|122197344|sp|Q2EEX7|FTSHL_HELSJ RecName: Full=ATP-dependent zinc metalloprotease FtsH homolog
gi|87242974|gb|ABD33966.1| ftsH protease [Helicosporidium sp. ex Simulium jonesi]
Length = 1460
Score = 33.5 bits (75), Expect = 8.8, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 36 EVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHE-MKRKMR 80
++ L N LG + + Y I+ N K YY N S P IH +K+ +R
Sbjct: 464 QINLNNPLGTKGVIYNIKSNNKKYYNLFNYRSRPFVIHAGIKKYLR 509
>gi|166197623|dbj|BAG06227.1| glycerol kinase [Trypanosoma vivax]
Length = 512
Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 15 SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM-NIASPPAAIH 73
S + K+T G L+ G EVR + T+A+++ KN +Y +IA A +
Sbjct: 266 SKGEAKNTYGTGCFLLMNVGEEVRFSKNGLLSTVAFQVGKNGSCHYALEGSIACAGATVE 325
Query: 74 EMKRKMRIDENV 85
MKR M + E +
Sbjct: 326 WMKRNMGLFERI 337
>gi|294898772|ref|XP_002776367.1| cdp-diacylglycerol--serine o-phosphatidyltransferase, putative
[Perkinsus marinus ATCC 50983]
gi|239883305|gb|EER08183.1| cdp-diacylglycerol--serine o-phosphatidyltransferase, putative
[Perkinsus marinus ATCC 50983]
Length = 615
Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN---RK 57
M Y FL+ ++++ +++ + + + N G V +LG R + Y + K RK
Sbjct: 473 MPFYRTYFLVHNEVTNHELRCLVKEMARAVTNNRGVVFSFEDLGWRNLPYFLLKQGYRRK 532
Query: 58 AYY---VFMNIASPPAAIHEMKRKMRIDENVLR 87
+Y MN + PA+ + ++ R + +LR
Sbjct: 533 FFYGRWFTMNFGAHPASWNAIEEIGRHNTGILR 565
>gi|203287582|ref|YP_002222597.1| 30S ribosomal protein S6 [Borrelia recurrentis A1]
gi|226703428|sp|B5RQU2|RS6_BORRA RecName: Full=30S ribosomal protein S6
gi|201084802|gb|ACH94376.1| 30S ribosomal protein S6 [Borrelia recurrentis A1]
Length = 134
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQE------NGGEVRLV-NELGMRTIAYRIR 53
+K YE FL R S+++ +Y+S ++E G V V N +G R + Y +R
Sbjct: 2 IKKYEGCFLFR----SEEL-----EYKSALEEVKKQLVAFGAVDFVENSIGERALEYPVR 52
Query: 54 KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
K + Y + + E++ ++++ +N+LR + L+ + + S +R+ R+ R+
Sbjct: 53 KQLRGRYEIIEFKMASDNLRELEAQLKLIKNLLRYMILVKINRKVSVKKVKRRNFREYRD 112
Query: 114 DR------FPRDRNVD 123
++ P + NVD
Sbjct: 113 NKDIKEKEQPSESNVD 128
>gi|227891675|ref|ZP_04009480.1| 30S ribosomal protein S6 [Lactobacillus salivarius ATCC 11741]
gi|227866478|gb|EEJ73899.1| 30S ribosomal protein S6 [Lactobacillus salivarius ATCC 11741]
Length = 96
Score = 33.5 bits (75), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ I + ++ ++++ +G E+ + R AY I + Y
Sbjct: 1 MTNYEITYIISPAIDEAAKTALVERFDNILKNDGAEIIDSKDWSKRRFAYEIGGFSEGIY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTL 91
+NI + A AI+E R +I++ +LR + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIV 92
Searching..................................................done
Results from round 2
>gi|315122246|ref|YP_004062735.1| 30S ribosomal protein S6 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495648|gb|ADR52247.1| 30S ribosomal protein S6 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 135
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 109/135 (80%), Positives = 122/135 (90%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFLLRQDI SQ+IKDTI QYQSLI+ENGGEVRLVNE GMRTIAYRI K+RKAYY
Sbjct: 1 MNLYEHVFLLRQDIPSQKIKDTIEQYQSLIKENGGEVRLVNEWGMRTIAYRINKHRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNIASPPA+IHE++R+MRIDENVLR LT+ VDSHE SP+LT+QR+DRDD+NDRFP+DR
Sbjct: 61 VLMNIASPPASIHELERRMRIDENVLRYLTISVDSHEDSPSLTMQRYDRDDKNDRFPKDR 120
Query: 121 NVDRKQHVSEEKPLS 135
N DRK HV EEK LS
Sbjct: 121 NADRKSHVDEEKVLS 135
>gi|254780329|ref|YP_003064742.1| 30S ribosomal protein S6 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040006|gb|ACT56802.1| 30S ribosomal protein S6 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 135
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY
Sbjct: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR
Sbjct: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
Query: 121 NVDRKQHVSEEKPLS 135
NVDRKQHVSEEKPLS
Sbjct: 121 NVDRKQHVSEEKPLS 135
>gi|86357078|ref|YP_468970.1| 30S ribosomal protein S6 [Rhizobium etli CFN 42]
gi|123512430|sp|Q2KA93|RS6_RHIEC RecName: Full=30S ribosomal protein S6
gi|86281180|gb|ABC90243.1| 30S ribosomal protein S6 [Rhizobium etli CFN 42]
Length = 152
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 64/128 (50%), Positives = 91/128 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
M+I +PPAAI EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDDR R DR
Sbjct: 61 ALMDIDAPPAAIQEMERQMRISEDVLRYMTIAVEKHEEGPSAMLQKRDRDDRGPREGGDR 120
Query: 121 NVDRKQHV 128
R+
Sbjct: 121 GPRREFGD 128
>gi|190891122|ref|YP_001977664.1| 30S ribosomal protein S6 [Rhizobium etli CIAT 652]
gi|218514152|ref|ZP_03510992.1| 30S ribosomal protein S6 [Rhizobium etli 8C-3]
gi|226695119|sp|B3PUT7|RS6_RHIE6 RecName: Full=30S ribosomal protein S6
gi|190696401|gb|ACE90486.1| 30S ribosomal protein S6 [Rhizobium etli CIAT 652]
gi|327188001|gb|EGE55231.1| 30S ribosomal protein S6 [Rhizobium etli CNPAF512]
Length = 152
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/128 (49%), Positives = 90/128 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
M+I +P AAI EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRDDR R DR
Sbjct: 61 ALMDIDAPAAAIQEMERQMRISEDVLRYMTIAVEKHEEGPSAMLQKRDRDDRGPREGGDR 120
Query: 121 NVDRKQHV 128
R+
Sbjct: 121 GPRREFGD 128
>gi|307294385|ref|ZP_07574229.1| ribosomal protein S6 [Sphingobium chlorophenolicum L-1]
gi|306880536|gb|EFN11753.1| ribosomal protein S6 [Sphingobium chlorophenolicum L-1]
Length = 137
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ +++EN G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEENEGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +R +R DR PR
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTIKVDELEGGPSVMMRKQERSERGDRGPRGD 120
Query: 121 NVDR-KQHVSEEKPLS 135
DR + EE P
Sbjct: 121 RGDRGPRREREEAPAG 136
>gi|33566505|emb|CAE37761.1| 30s ribosomal protein s6 [Bordetella parapertussis]
gi|33568499|emb|CAE32411.1| 30s ribosomal protein s6 [Bordetella bronchiseptica RB50]
Length = 157
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ G V + + G R +AY I+K KA+Y
Sbjct: 32 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQSGTVHRLEDWGRRQLAYPIQKLVKAHY 90
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ R ++ VLR L + +P++ ++ +R
Sbjct: 91 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAPAAPSIMMKSVER 139
>gi|13476510|ref|NP_108080.1| 30S ribosomal protein S6 [Mesorhizobium loti MAFF303099]
gi|24212327|sp|Q984T8|RS6_RHILO RecName: Full=30S ribosomal protein S6
gi|14027271|dbj|BAB54225.1| 30S ribosomal protein S6 [Mesorhizobium loti MAFF303099]
Length = 166
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVISANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-HDRDDRNDRFPRD 119
M++ PPAA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q+ +R +R RD
Sbjct: 61 TLMDLNCPPAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGSFGDRD 120
Query: 120 RNV 122
R
Sbjct: 121 RGD 123
>gi|150395965|ref|YP_001326432.1| 30S ribosomal protein S6 [Sinorhizobium medicae WSM419]
gi|166227387|sp|A6U7G7|RS6_SINMW RecName: Full=30S ribosomal protein S6
gi|150027480|gb|ABR59597.1| ribosomal protein S6 [Sinorhizobium medicae WSM419]
Length = 145
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/112 (51%), Positives = 86/112 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +I+ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDGLVEQYKGVIEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
V M+I +P A+HE++R+MRI+E++LR +T+ VD HE+ P+ +Q+ DRDDR
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDILRYMTIAVDKHEEGPSAMMQKRDRDDR 112
>gi|260466963|ref|ZP_05813145.1| ribosomal protein S6 [Mesorhizobium opportunistum WSM2075]
gi|259029260|gb|EEW30554.1| ribosomal protein S6 [Mesorhizobium opportunistum WSM2075]
Length = 163
Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVIAANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-HDRDDRNDRFPRD 119
M++ PPAA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q+ +R +R RD
Sbjct: 61 TLMDLTCPPAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGGFGDRD 120
Query: 120 RNV 122
R
Sbjct: 121 RGD 123
>gi|237745858|ref|ZP_04576338.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS]
gi|229377209|gb|EEO27300.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS]
Length = 125
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKNSVTSRGGKIHRVEDWGRRQLAYMINKFAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI ++E++ + ++ +LR LT+ + E P+ ++ +++
Sbjct: 60 VLMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEESAKAPAPAE 119
Query: 121 NVDRKQ 126
Sbjct: 120 QQSASA 125
>gi|319784438|ref|YP_004143914.1| ribosomal protein S6 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170326|gb|ADV13864.1| ribosomal protein S6 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 166
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S QQ+ + QY+ +I NGG V V G++++ YR+ KNRKAYY
Sbjct: 1 MALYEHVFLARQDLSQQQVDALVEQYKGVISANGGSVGRVENWGLKSLTYRVNKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-HDRDDRNDRFPRD 119
M++ P AA++EM+R+M + E+VLR LT+ V++HE+ P+ +Q+ +R +R RD
Sbjct: 61 TLMDLNCPAAALNEMERQMGLSEDVLRFLTIKVEAHEEGPSAMMQKREERSERGGFGDRD 120
Query: 120 RNV 122
R
Sbjct: 121 RGD 123
>gi|209548657|ref|YP_002280574.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226695120|sp|B5ZWC9|RS6_RHILW RecName: Full=30S ribosomal protein S6
gi|209534413|gb|ACI54348.1| ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 155
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 18/139 (12%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD---------- 110
M+I +P AA+ EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRD
Sbjct: 61 ALMDIDAPAAAVQEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQKRDRDDRPREGGRGP 120
Query: 111 --------DRNDRFPRDRN 121
DR R PR+
Sbjct: 121 REGGFGDRDRGPRPPREGG 139
>gi|116251321|ref|YP_767159.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. viciae 3841]
gi|241203935|ref|YP_002975031.1| 30S ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|166227372|sp|Q1MJ10|RS6_RHIL3 RecName: Full=30S ribosomal protein S6
gi|115255969|emb|CAK07050.1| putative 30S ribosomal protein S6 [Rhizobium leguminosarum bv.
viciae 3841]
gi|240857825|gb|ACS55492.1| ribosomal protein S6 [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 155
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 18/139 (12%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD---------- 110
M+I +P AA+ EM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+ DRD
Sbjct: 61 ALMDIDAPAAAVQEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQKRDRDDRPREGGRGP 120
Query: 111 --------DRNDRFPRDRN 121
DR R PR+
Sbjct: 121 REGGFGDRDRGPRPPREGG 139
>gi|163857369|ref|YP_001631667.1| 30S ribosomal protein S6 [Bordetella petrii DSM 12804]
gi|226703426|sp|A9ITA2|RS6_BORPD RecName: Full=30S ribosomal protein S6
gi|163261097|emb|CAP43399.1| 30S ribosomal protein S6 [Bordetella petrii]
Length = 125
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQTLVTGQGGAVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A + E++ R ++ VLR L + + SP++ ++ +R++
Sbjct: 60 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTSPSIMMKSVEREEARKASTEAS 119
Query: 121 NVDRKQ 126
+ Q
Sbjct: 120 APAQAQ 125
>gi|225023644|ref|ZP_03712836.1| hypothetical protein EIKCOROL_00507 [Eikenella corrodens ATCC
23834]
gi|224943526|gb|EEG24735.1| hypothetical protein EIKCOROL_00507 [Eikenella corrodens ATCC
23834]
Length = 124
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++LI E+GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTLITESGGHIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI PAAI E++ R ++ VLR LT+ +D + ++ + + P++
Sbjct: 60 VLMNIECTPAAIEELETGFRFNDAVLRHLTIKMDEAVTEASPMMKEEKSKNLLNGQPQEE 119
Query: 121 NV 122
Sbjct: 120 AA 121
>gi|294011583|ref|YP_003545043.1| ribosomal protein S6 [Sphingobium japonicum UT26S]
gi|292674913|dbj|BAI96431.1| ribosomal protein S6 [Sphingobium japonicum UT26S]
Length = 134
Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ +++E G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEEMQGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +R +R R R
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTIKVDELETGPSVMMRKQERAERGPRGERGD 120
Query: 121 NVDRKQHVSEEKPLS 135
R++ EE P
Sbjct: 121 RGPRRER--EEAPAG 133
>gi|319778268|ref|YP_004129181.1| SSU ribosomal protein S6p [Taylorella equigenitalis MCE9]
gi|317108292|gb|ADU91038.1| SSU ribosomal protein S6p [Taylorella equigenitalis MCE9]
Length = 159
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+++ D S+Q+ +Y +LI+ NGG+V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVYIVHPD-QSEQVPAMTERYTALIKSNGGQVHRSEDWGRRILAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD-RNDRFPRD 119
V +NI + E++ R ++ +LR L + + P++ ++ +R++ R D
Sbjct: 60 VCLNIECNQETLDELENNFRYNDAILRHLVIKQKAAVTEPSIMMKSTEREESRKAASAED 119
Query: 120 RNVDRKQHVSEEK 132
RN + H +E+
Sbjct: 120 RNSSKANHSAEDS 132
>gi|209520393|ref|ZP_03269156.1| ribosomal protein S6 [Burkholderia sp. H160]
gi|209499178|gb|EDZ99270.1| ribosomal protein S6 [Burkholderia sp. H160]
Length = 124
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKLKKAETGPSPMMKEVQREE 110
>gi|325265835|ref|ZP_08132521.1| 30S ribosomal protein S6 [Kingella denitrificans ATCC 33394]
gi|324982473|gb|EGC18099.1| 30S ribosomal protein S6 [Kingella denitrificans ATCC 33394]
Length = 169
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 46 MRHYEIVFIVHPD-QSEQVNAMVERYKTMITEAGGKIHRLEDWGRRQLAYPINKIHKAHY 104
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA + E++ R ++ +LR LT+ + + + ++
Sbjct: 105 VLMNIEATPATVEELETGFRFNDAILRHLTIQMKAAVTEASPMMREE 151
>gi|146277395|ref|YP_001167554.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides ATCC 17025]
gi|166227374|sp|A4WS85|RS6_RHOS5 RecName: Full=30S ribosomal protein S6
gi|145555636|gb|ABP70249.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides ATCC 17025]
Length = 132
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 83/127 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D +R DR R
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRDERERGDRGDRPD 120
Query: 121 NVDRKQH 127
DR +
Sbjct: 121 RGDRGER 127
>gi|237748615|ref|ZP_04579095.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13]
gi|229379977|gb|EEO30068.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13]
Length = 121
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKNSVTTRGGKIHRVEDWGRRQLAYMINKFAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI ++E++ + ++ +LR LT+ + E P+ ++ +++
Sbjct: 60 VLMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEE 110
>gi|293604273|ref|ZP_06686680.1| 30S ribosomal protein S6 [Achromobacter piechaudii ATCC 43553]
gi|292817150|gb|EFF76224.1| 30S ribosomal protein S6 [Achromobacter piechaudii ATCC 43553]
Length = 124
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI A + E++ R ++ VLR L + + +P++ ++ +R++
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTTPSIMMKSVEREE 110
>gi|71906855|ref|YP_284442.1| 30S ribosomal protein S6 [Dechloromonas aromatica RCB]
gi|91207911|sp|Q47GQ9|RS6_DECAR RecName: Full=30S ribosomal protein S6
gi|71846476|gb|AAZ45972.1| SSU ribosomal protein S6P [Dechloromonas aromatica RCB]
Length = 127
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ + +Y++++ GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEICFIVHPD-QSEQVPGMVERYRAIVTAKGGSIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI ++E++ + ++ VLR LT+ + + +P+ ++
Sbjct: 60 VLMNIECDGDTLNELEHSFKFNDAVLRHLTVKMKAAVTTPSPMMKEE 106
>gi|295676422|ref|YP_003604946.1| ribosomal protein S6 [Burkholderia sp. CCGE1002]
gi|295436265|gb|ADG15435.1| ribosomal protein S6 [Burkholderia sp. CCGE1002]
Length = 124
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 110
>gi|332283718|ref|YP_004415629.1| 30S ribosomal protein S6 [Pusillimonas sp. T7-7]
gi|330427671|gb|AEC19005.1| 30S ribosomal protein S6 [Pusillimonas sp. T7-7]
Length = 126
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +YQ ++ NGG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYQGVVTTNGGTVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI A+ E++ R ++ +LR L + + +L ++ +R++
Sbjct: 60 VCLNIECGQVALDELEHSFRYNDAILRHLVIKTKKPVTAASLMMKSVEREEARKASAETT 119
Query: 121 NVDRKQH 127
+ +
Sbjct: 120 TASQSEE 126
>gi|261342857|ref|ZP_05970715.1| ribosomal protein S6 [Enterobacter cancerogenus ATCC 35316]
gi|288314900|gb|EFC53838.1| ribosomal protein S6 [Enterobacter cancerogenus ATCC 35316]
Length = 131
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P AI E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDSDAGDSEE 131
>gi|254252202|ref|ZP_04945520.1| Ribosomal protein S6 [Burkholderia dolosa AUO158]
gi|124894811|gb|EAY68691.1| Ribosomal protein S6 [Burkholderia dolosa AUO158]
Length = 133
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 10 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 69 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 117
>gi|119897009|ref|YP_932222.1| 30S ribosomal protein S6 [Azoarcus sp. BH72]
gi|166226799|sp|A1K3D0|RS6_AZOSB RecName: Full=30S ribosomal protein S6
gi|119669422|emb|CAL93335.1| RpsF protein [Azoarcus sp. BH72]
Length = 127
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKSIVTARNGQIHRLEDWGRRQLAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A+ E++ + ++ VLR LT+ + +P+ ++ +
Sbjct: 60 VLMNIECDGEALGELEHAFKFNDAVLRHLTIKMKKAVTTPSPMMKEEKSRSLTPAAGDEG 119
Query: 121 NVDRKQH 127
Sbjct: 120 KPAEAAE 126
>gi|91783363|ref|YP_558569.1| 30S ribosomal protein S6 [Burkholderia xenovorans LB400]
gi|170692292|ref|ZP_02883455.1| ribosomal protein S6 [Burkholderia graminis C4D1M]
gi|187923776|ref|YP_001895418.1| 30S ribosomal protein S6 [Burkholderia phytofirmans PsJN]
gi|296157724|ref|ZP_06840558.1| ribosomal protein S6 [Burkholderia sp. Ch1-1]
gi|307729537|ref|YP_003906761.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1003]
gi|323526191|ref|YP_004228344.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1001]
gi|122970480|sp|Q13ZH2|RS6_BURXL RecName: Full=30S ribosomal protein S6
gi|226703435|sp|B2T3N3|RS6_BURPP RecName: Full=30S ribosomal protein S6
gi|91687317|gb|ABE30517.1| SSU ribosomal protein S6P [Burkholderia xenovorans LB400]
gi|170142722|gb|EDT10887.1| ribosomal protein S6 [Burkholderia graminis C4D1M]
gi|187714970|gb|ACD16194.1| ribosomal protein S6 [Burkholderia phytofirmans PsJN]
gi|295891970|gb|EFG71754.1| ribosomal protein S6 [Burkholderia sp. Ch1-1]
gi|307584072|gb|ADN57470.1| ribosomal protein S6 [Burkholderia sp. CCGE1003]
gi|323383193|gb|ADX55284.1| ribosomal protein S6 [Burkholderia sp. CCGE1001]
Length = 124
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 110
>gi|167836329|ref|ZP_02463212.1| 30S ribosomal protein S6 [Burkholderia thailandensis MSMB43]
Length = 124
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|311105033|ref|YP_003977886.1| 30S ribosomal protein S6 [Achromobacter xylosoxidans A8]
gi|310759722|gb|ADP15171.1| ribosomal protein S6 [Achromobacter xylosoxidans A8]
Length = 125
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI A + E++ R ++ VLR L + + +P++ ++ +R
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQATPSIMMKSVER 108
>gi|270265014|ref|ZP_06193277.1| 30S ribosomal protein S6 [Serratia odorifera 4Rx13]
gi|270040948|gb|EFA14049.1| 30S ribosomal protein S6 [Serratia odorifera 4Rx13]
Length = 132
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ + D SEE
Sbjct: 120 ETSDDADAGDSEE 132
>gi|237654325|ref|YP_002890639.1| 30S ribosomal protein S6 [Thauera sp. MZ1T]
gi|237625572|gb|ACR02262.1| ribosomal protein S6 [Thauera sp. MZ1T]
Length = 128
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+S++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKSIVTTRNGQIHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E++ + ++ VLR LT+ + +P+ ++ + R
Sbjct: 60 VLMNIECDGETLAELEHSFKFNDAVLRHLTIKMKKAVTTPSPMMK-----EEKSRSMNIG 114
Query: 121 NVDRKQHVSEEKPL 134
D K SE
Sbjct: 115 ADDAKPADSEAAAA 128
>gi|22124559|ref|NP_667982.1| 30S ribosomal protein S6 [Yersinia pestis KIM 10]
gi|45440396|ref|NP_991935.1| 30S ribosomal protein S6 [Yersinia pestis biovar Microtus str.
91001]
gi|51594790|ref|YP_068981.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 32953]
gi|108806087|ref|YP_650003.1| 30S ribosomal protein S6 [Yersinia pestis Antiqua]
gi|108813443|ref|YP_649210.1| 30S ribosomal protein S6 [Yersinia pestis Nepal516]
gi|123440773|ref|YP_001004765.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|153950227|ref|YP_001402593.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 31758]
gi|153997316|ref|ZP_02022416.1| 30S ribosomal protein S6 [Yersinia pestis CA88-4125]
gi|162419609|ref|YP_001605263.1| 30S ribosomal protein S6 [Yersinia pestis Angola]
gi|165928153|ref|ZP_02223985.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937530|ref|ZP_02226093.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. IP275]
gi|166011303|ref|ZP_02232201.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166214044|ref|ZP_02240079.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401345|ref|ZP_02306845.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420582|ref|ZP_02312335.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423107|ref|ZP_02314860.1| ribosomal protein S6 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170025999|ref|YP_001722504.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis YPIII]
gi|186893799|ref|YP_001870911.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis PB1/+]
gi|218930553|ref|YP_002348428.1| 30S ribosomal protein S6 [Yersinia pestis CO92]
gi|229836649|ref|ZP_04456815.1| 30S ribosomal subunit protein S6 [Yersinia pestis Pestoides A]
gi|229839193|ref|ZP_04459352.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899757|ref|ZP_04514898.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903919|ref|ZP_04519032.1| 30S ribosomal subunit protein S6 [Yersinia pestis Nepal516]
gi|270489091|ref|ZP_06206165.1| ribosomal protein S6 [Yersinia pestis KIM D27]
gi|294505336|ref|YP_003569398.1| 30S ribosomal protein S6 [Yersinia pestis Z176003]
gi|332160035|ref|YP_004296612.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|24212313|sp|Q8ZB81|RS6_YERPE RecName: Full=30S ribosomal protein S6
gi|61216169|sp|Q66FA2|RS6_YERPS RecName: Full=30S ribosomal protein S6
gi|123246054|sp|Q1CBW4|RS6_YERPA RecName: Full=30S ribosomal protein S6
gi|123372931|sp|Q1CEH0|RS6_YERPN RecName: Full=30S ribosomal protein S6
gi|166227403|sp|A1JIS8|RS6_YERE8 RecName: Full=30S ribosomal protein S6
gi|167011250|sp|A7FMW5|RS6_YERP3 RecName: Full=30S ribosomal protein S6
gi|226705652|sp|B2K2L3|RS6_YERPB RecName: Full=30S ribosomal protein S6
gi|226705653|sp|A9QYL5|RS6_YERPG RecName: Full=30S ribosomal protein S6
gi|226705654|sp|B1JMM4|RS6_YERPY RecName: Full=30S ribosomal protein S6
gi|21957359|gb|AAM84233.1|AE013667_6 30S ribosomal subunit protein S6 [Yersinia pestis KIM 10]
gi|45435253|gb|AAS60812.1| 30S ribosomal protein S6 [Yersinia pestis biovar Microtus str.
91001]
gi|51588072|emb|CAH19678.1| 30S ribosomal protein S6 [Yersinia pseudotuberculosis IP 32953]
gi|108777091|gb|ABG19610.1| SSU ribosomal protein S6P [Yersinia pestis Nepal516]
gi|108778000|gb|ABG12058.1| SSU ribosomal protein S6P [Yersinia pestis Antiqua]
gi|115349164|emb|CAL22127.1| 30S ribosomal protein S6 [Yersinia pestis CO92]
gi|122087734|emb|CAL10519.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|149288953|gb|EDM39033.1| 30S ribosomal protein S6 [Yersinia pestis CA88-4125]
gi|152961722|gb|ABS49183.1| ribosomal protein S6 [Yersinia pseudotuberculosis IP 31758]
gi|162352424|gb|ABX86372.1| ribosomal protein S6 [Yersinia pestis Angola]
gi|165914635|gb|EDR33249.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. IP275]
gi|165919840|gb|EDR37141.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989687|gb|EDR41988.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166204839|gb|EDR49319.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961388|gb|EDR57409.1| ribosomal protein S6 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049370|gb|EDR60778.1| ribosomal protein S6 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057277|gb|EDR67023.1| ribosomal protein S6 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752533|gb|ACA70051.1| ribosomal protein S6 [Yersinia pseudotuberculosis YPIII]
gi|186696825|gb|ACC87454.1| ribosomal protein S6 [Yersinia pseudotuberculosis PB1/+]
gi|229679689|gb|EEO75792.1| 30S ribosomal subunit protein S6 [Yersinia pestis Nepal516]
gi|229687249|gb|EEO79324.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695559|gb|EEO85606.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706333|gb|EEO92341.1| 30S ribosomal subunit protein S6 [Yersinia pestis Pestoides A]
gi|262363400|gb|ACY60121.1| 30S ribosomal protein S6 [Yersinia pestis D106004]
gi|262367223|gb|ACY63780.1| 30S ribosomal protein S6 [Yersinia pestis D182038]
gi|270337595|gb|EFA48372.1| ribosomal protein S6 [Yersinia pestis KIM D27]
gi|294355795|gb|ADE66136.1| 30S ribosomal protein S6 [Yersinia pestis Z176003]
gi|318607405|emb|CBY28903.1| SSU ribosomal protein S6p [Yersinia enterocolitica subsp.
palearctica Y11]
gi|320013743|gb|ADV97314.1| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|325664265|gb|ADZ40909.1| 30S ribosomal protein S6 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862081|emb|CBX72247.1| 30S ribosomal protein S6 [Yersinia enterocolitica W22703]
Length = 130
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + V + ++ D F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERHDFASEA 119
Query: 121 NVDRKQHVSEE 131
N D + SEE
Sbjct: 120 NDDSEAGDSEE 130
>gi|146310036|ref|YP_001175110.1| 30S ribosomal protein S6 [Enterobacter sp. 638]
gi|167011246|sp|A4W5S9|RS6_ENT38 RecName: Full=30S ribosomal protein S6
gi|145316912|gb|ABP59059.1| SSU ribosomal protein S6P [Enterobacter sp. 638]
Length = 131
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + + + ++ + +R +R D F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKNAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDSDAGDSEE 131
>gi|300715052|ref|YP_003739855.1| 30S ribosomal protein S6 [Erwinia billingiae Eb661]
gi|299060888|emb|CAX57995.1| 30S ribosomal protein S6 [Erwinia billingiae Eb661]
Length = 131
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + V + ++ + +R DR + F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRDRREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 TSDDADAGDSEE 131
>gi|317049742|ref|YP_004117390.1| 30S ribosomal protein S6 [Pantoea sp. At-9b]
gi|316951359|gb|ADU70834.1| ribosomal protein S6 [Pantoea sp. At-9b]
Length = 131
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 AADDSDAGDSEE 131
>gi|152973066|ref|YP_001338212.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238892680|ref|YP_002917414.1| 30S ribosomal protein S6 [Klebsiella pneumoniae NTUH-K2044]
gi|262045372|ref|ZP_06018396.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330003413|ref|ZP_08304611.1| ribosomal protein S6 [Klebsiella sp. MS 92-3]
gi|166226974|sp|A6THB1|RS6_KLEP7 RecName: Full=30S ribosomal protein S6
gi|150957915|gb|ABR79945.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238544996|dbj|BAH61347.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259037290|gb|EEW38537.1| 30S ribosomal protein S6 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536973|gb|EGF63266.1| ribosomal protein S6 [Klebsiella sp. MS 92-3]
Length = 131
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P AI E++ R ++ V+RS+ + + ++ + +R +R + F +
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDSEAGDSEE 131
>gi|53719094|ref|YP_108080.1| 30S ribosomal protein S6 [Burkholderia pseudomallei K96243]
gi|53723581|ref|YP_103060.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 23344]
gi|67640204|ref|ZP_00439019.1| 30S ribosomal protein S6 [Burkholderia mallei GB8 horse 4]
gi|76810465|ref|YP_333811.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710b]
gi|83721320|ref|YP_442700.1| 30S ribosomal protein S6 [Burkholderia thailandensis E264]
gi|121600145|ref|YP_993214.1| 30S ribosomal protein S6 [Burkholderia mallei SAVP1]
gi|124386277|ref|YP_001026011.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10229]
gi|126440551|ref|YP_001059287.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 668]
gi|126450631|ref|YP_001080722.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10247]
gi|126453081|ref|YP_001066555.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106a]
gi|134277876|ref|ZP_01764591.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 305]
gi|167581639|ref|ZP_02374513.1| 30S ribosomal protein S6 [Burkholderia thailandensis TXDOH]
gi|167619759|ref|ZP_02388390.1| 30S ribosomal protein S6 [Burkholderia thailandensis Bt4]
gi|167719190|ref|ZP_02402426.1| 30S ribosomal protein S6 [Burkholderia pseudomallei DM98]
gi|167738192|ref|ZP_02410966.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 14]
gi|167815381|ref|ZP_02447061.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 91]
gi|167823789|ref|ZP_02455260.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 9]
gi|167845332|ref|ZP_02470840.1| 30S ribosomal protein S6 [Burkholderia pseudomallei B7210]
gi|167893874|ref|ZP_02481276.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 7894]
gi|167902328|ref|ZP_02489533.1| 30S ribosomal protein S6 [Burkholderia pseudomallei NCTC 13177]
gi|167910566|ref|ZP_02497657.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 112]
gi|167918592|ref|ZP_02505683.1| 30S ribosomal protein S6 [Burkholderia pseudomallei BCC215]
gi|217421378|ref|ZP_03452882.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 576]
gi|226197319|ref|ZP_03792896.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pakistan 9]
gi|237812613|ref|YP_002897064.1| ribosomal protein S6 [Burkholderia pseudomallei MSHR346]
gi|242314479|ref|ZP_04813495.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106b]
gi|254178587|ref|ZP_04885242.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 10399]
gi|254179490|ref|ZP_04886089.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1655]
gi|254189118|ref|ZP_04895629.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pasteur 52237]
gi|254197983|ref|ZP_04904405.1| 30S ribosomal protein S6 [Burkholderia pseudomallei S13]
gi|254200006|ref|ZP_04906372.1| 30S ribosomal protein S6 [Burkholderia mallei FMH]
gi|254206339|ref|ZP_04912691.1| 30S ribosomal protein S6 [Burkholderia mallei JHU]
gi|254258001|ref|ZP_04949055.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710a]
gi|254297372|ref|ZP_04964825.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 406e]
gi|254358246|ref|ZP_04974519.1| 30S ribosomal protein S6 [Burkholderia mallei 2002721280]
gi|257138912|ref|ZP_05587174.1| 30S ribosomal protein S6 [Burkholderia thailandensis E264]
gi|61215454|sp|Q62JQ9|RS6_BURMA RecName: Full=30S ribosomal protein S6
gi|61215467|sp|Q63UY6|RS6_BURPS RecName: Full=30S ribosomal protein S6
gi|91207904|sp|Q3JRJ2|RS6_BURP1 RecName: Full=30S ribosomal protein S6
gi|123536854|sp|Q2SWJ9|RS6_BURTA RecName: Full=30S ribosomal protein S6
gi|166226807|sp|A3MKD6|RS6_BURM7 RecName: Full=30S ribosomal protein S6
gi|166226808|sp|A2S242|RS6_BURM9 RecName: Full=30S ribosomal protein S6
gi|166226809|sp|A1V4R1|RS6_BURMS RecName: Full=30S ribosomal protein S6
gi|166226810|sp|A3NW34|RS6_BURP0 RecName: Full=30S ribosomal protein S6
gi|166226811|sp|A3NAB6|RS6_BURP6 RecName: Full=30S ribosomal protein S6
gi|52209508|emb|CAH35460.1| putative 30S ribosomal protein S6 [Burkholderia pseudomallei
K96243]
gi|52427004|gb|AAU47597.1| ribosomal protein S6 [Burkholderia mallei ATCC 23344]
gi|76579918|gb|ABA49393.1| ribosomal protein S6 [Burkholderia pseudomallei 1710b]
gi|83655145|gb|ABC39208.1| ribosomal protein S6 [Burkholderia thailandensis E264]
gi|121228955|gb|ABM51473.1| 30S ribosomal protein S6 [Burkholderia mallei SAVP1]
gi|124294297|gb|ABN03566.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10229]
gi|126220044|gb|ABN83550.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 668]
gi|126226723|gb|ABN90263.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106a]
gi|126243501|gb|ABO06594.1| 30S ribosomal protein S6 [Burkholderia mallei NCTC 10247]
gi|134251526|gb|EBA51605.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 305]
gi|147749602|gb|EDK56676.1| 30S ribosomal protein S6 [Burkholderia mallei FMH]
gi|147753782|gb|EDK60847.1| 30S ribosomal protein S6 [Burkholderia mallei JHU]
gi|148027373|gb|EDK85394.1| 30S ribosomal protein S6 [Burkholderia mallei 2002721280]
gi|157807511|gb|EDO84681.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 406e]
gi|157936797|gb|EDO92467.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pasteur 52237]
gi|160699626|gb|EDP89596.1| 30S ribosomal protein S6 [Burkholderia mallei ATCC 10399]
gi|169654724|gb|EDS87417.1| 30S ribosomal protein S6 [Burkholderia pseudomallei S13]
gi|184210030|gb|EDU07073.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1655]
gi|217395120|gb|EEC35138.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 576]
gi|225930698|gb|EEH26708.1| 30S ribosomal protein S6 [Burkholderia pseudomallei Pakistan 9]
gi|237503908|gb|ACQ96226.1| ribosomal protein S6 [Burkholderia pseudomallei MSHR346]
gi|238520890|gb|EEP84346.1| 30S ribosomal protein S6 [Burkholderia mallei GB8 horse 4]
gi|242137718|gb|EES24120.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1106b]
gi|254216690|gb|EET06074.1| 30S ribosomal protein S6 [Burkholderia pseudomallei 1710a]
Length = 124
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|157368693|ref|YP_001476682.1| 30S ribosomal protein S6 [Serratia proteamaculans 568]
gi|167011248|sp|A8G8W4|RS6_SERP5 RecName: Full=30S ribosomal protein S6
gi|157320457|gb|ABV39554.1| ribosomal protein S6 [Serratia proteamaculans 568]
Length = 132
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|293393198|ref|ZP_06637513.1| 30S ribosomal protein S6 [Serratia odorifera DSM 4582]
gi|291424344|gb|EFE97558.1| 30S ribosomal protein S6 [Serratia odorifera DSM 4582]
Length = 132
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|283834820|ref|ZP_06354561.1| ribosomal protein S6 [Citrobacter youngae ATCC 29220]
gi|291069068|gb|EFE07177.1| ribosomal protein S6 [Citrobacter youngae ATCC 29220]
Length = 131
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDADAGDSEE 131
>gi|78066643|ref|YP_369412.1| 30S ribosomal protein S6 [Burkholderia sp. 383]
gi|161524573|ref|YP_001579585.1| 30S ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|167586986|ref|ZP_02379374.1| ribosomal protein S6 [Burkholderia ubonensis Bu]
gi|189350671|ref|YP_001946299.1| 30S ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|221198146|ref|ZP_03571192.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2M]
gi|221208363|ref|ZP_03581366.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2]
gi|221215114|ref|ZP_03588081.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD1]
gi|91207905|sp|Q39FJ8|RS6_BURS3 RecName: Full=30S ribosomal protein S6
gi|226703433|sp|A9AJW1|RS6_BURM1 RecName: Full=30S ribosomal protein S6
gi|77967388|gb|ABB08768.1| SSU ribosomal protein S6P [Burkholderia sp. 383]
gi|160342002|gb|ABX15088.1| ribosomal protein S6 [Burkholderia multivorans ATCC 17616]
gi|189334693|dbj|BAG43763.1| small subunit ribosomal protein S6 [Burkholderia multivorans ATCC
17616]
gi|221165050|gb|EED97529.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD1]
gi|221171776|gb|EEE04220.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2]
gi|221182078|gb|EEE14479.1| 30S ribosomal protein S6 [Burkholderia multivorans CGD2M]
gi|325522547|gb|EGD01099.1| 30S ribosomal protein S6 [Burkholderia sp. TJI49]
Length = 124
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|206579361|ref|YP_002240848.1| ribosomal protein S6 [Klebsiella pneumoniae 342]
gi|288937505|ref|YP_003441564.1| ribosomal protein S6 [Klebsiella variicola At-22]
gi|290512243|ref|ZP_06551610.1| small subunit ribosomal protein S6 [Klebsiella sp. 1_1_55]
gi|226703477|sp|B5Y307|RS6_KLEP3 RecName: Full=30S ribosomal protein S6
gi|206568419|gb|ACI10195.1| ribosomal protein S6 [Klebsiella pneumoniae 342]
gi|288892214|gb|ADC60532.1| ribosomal protein S6 [Klebsiella variicola At-22]
gi|289775238|gb|EFD83239.1| small subunit ribosomal protein S6 [Klebsiella sp. 1_1_55]
Length = 131
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAAGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDSEAGDSEE 131
>gi|186475676|ref|YP_001857146.1| 30S ribosomal protein S6 [Burkholderia phymatum STM815]
gi|226703434|sp|B2JG18|RS6_BURP8 RecName: Full=30S ribosomal protein S6
gi|184192135|gb|ACC70100.1| ribosomal protein S6 [Burkholderia phymatum STM815]
Length = 124
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|238021235|ref|ZP_04601661.1| hypothetical protein GCWU000324_01133 [Kingella oralis ATCC 51147]
gi|237868215|gb|EEP69221.1| hypothetical protein GCWU000324_01133 [Kingella oralis ATCC 51147]
Length = 124
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+S+I E GG++ + + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKSMITEAGGKIHRLEDWGRRQLAYQINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA I E++ R ++ VLR LT+ + P++ +Q
Sbjct: 60 VLMNIEATPAIIEELETGFRFNDAVLRHLTIQKKAAVTEPSVMMQGE 106
>gi|259907189|ref|YP_002647545.1| 30S ribosomal protein S6 [Erwinia pyrifoliae Ep1/96]
gi|224962811|emb|CAX54269.1| 30S ribosomal protein S6 [Erwinia pyrifoliae Ep1/96]
gi|283476998|emb|CAY72890.1| 30S ribosomal protein S6 [Erwinia pyrifoliae DSM 12163]
Length = 131
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AAI E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQAAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 TSDDADAGDSEE 131
>gi|15964891|ref|NP_385244.1| 30S ribosomal protein S6 [Sinorhizobium meliloti 1021]
gi|307300962|ref|ZP_07580731.1| ribosomal protein S6 [Sinorhizobium meliloti BL225C]
gi|307322232|ref|ZP_07601600.1| ribosomal protein S6 [Sinorhizobium meliloti AK83]
gi|24212320|sp|Q92QZ7|RS6_RHIME RecName: Full=30S ribosomal protein S6
gi|15074070|emb|CAC45717.1| Putative 30S ribosomal protein S6 [Sinorhizobium meliloti 1021]
gi|306892119|gb|EFN22937.1| ribosomal protein S6 [Sinorhizobium meliloti AK83]
gi|306903917|gb|EFN34503.1| ribosomal protein S6 [Sinorhizobium meliloti BL225C]
Length = 149
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/106 (50%), Positives = 80/106 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +I+ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDALVEQYKGVIEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V M+I +P A+HE++R+MRI+E+VLR +T+ V HE+ P+ +Q+
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDVLRYMTIAVGKHEEGPSAMMQK 106
>gi|159184610|ref|NP_529003.1| 30S ribosomal protein S6 [Agrobacterium tumefaciens str. C58]
gi|24212301|sp|Q8UGE7|RS6_AGRT5 RecName: Full=30S ribosomal protein S6
gi|17739486|gb|AAL42104.1| 30S ribosomal protein S6 [Agrobacterium tumefaciens str. C58]
Length = 153
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 16/137 (11%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDIS+QQ+ + QY+ +I+ GG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHIFLARQDISAQQVDALVEQYKGVIESFGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
M+I +P AA+HE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEVERQMRINEDVLRYMTIAVEAHEEGPSAMMQKRDRDDRPRRDGDRP 120
Query: 107 --HDRDDRNDRFPRDRN 121
R+DR R PR+
Sbjct: 121 DRGPREDRGPRPPREGG 137
>gi|317493583|ref|ZP_07952004.1| ribosomal protein S6 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918526|gb|EFV39864.1| ribosomal protein S6 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 132
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ R ++ V+RS+ + E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDADAGDSEE 132
>gi|170733233|ref|YP_001765180.1| 30S ribosomal protein S6 [Burkholderia cenocepacia MC0-3]
gi|206560309|ref|YP_002231073.1| 30S ribosomal protein S6 [Burkholderia cenocepacia J2315]
gi|226703431|sp|B1JTF3|RS6_BURCC RecName: Full=30S ribosomal protein S6
gi|226703432|sp|B4EBH3|RS6_BURCJ RecName: Full=30S ribosomal protein S6
gi|169816475|gb|ACA91058.1| ribosomal protein S6 [Burkholderia cenocepacia MC0-3]
gi|198036350|emb|CAR52246.1| 30S ribosomal protein S6 [Burkholderia cenocepacia J2315]
Length = 124
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|167562479|ref|ZP_02355395.1| 30S ribosomal protein S6 [Burkholderia oklahomensis EO147]
gi|167569663|ref|ZP_02362537.1| 30S ribosomal protein S6 [Burkholderia oklahomensis C6786]
Length = 124
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAESGPSPMMKEVQR 108
>gi|291619077|ref|YP_003521819.1| RpsF [Pantoea ananatis LMG 20103]
gi|291154107|gb|ADD78691.1| RpsF [Pantoea ananatis LMG 20103]
gi|327395409|dbj|BAK12831.1| 30S ribosomal protein S6 RpsF [Pantoea ananatis AJ13355]
Length = 131
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + V + + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKNAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 SADDSDAGDSEE 131
>gi|157147829|ref|YP_001455147.1| 30S ribosomal protein S6 [Citrobacter koseri ATCC BAA-895]
gi|166226820|sp|A8AMJ8|RS6_CITK8 RecName: Full=30S ribosomal protein S6
gi|157085034|gb|ABV14712.1| hypothetical protein CKO_03633 [Citrobacter koseri ATCC BAA-895]
Length = 131
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDADAGDSEE 131
>gi|312796131|ref|YP_004029053.1| SSU ribosomal protein S6P [Burkholderia rhizoxinica HKI 454]
gi|312167906|emb|CBW74909.1| SSU ribosomal protein S6P [Burkholderia rhizoxinica HKI 454]
Length = 127
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ I +Y+S I +GG++ + + G R +AY I K KA+Y
Sbjct: 3 MRHYEITFIVHPD-QSEQVPAMIEKYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI A + E++ + ++ VLR L + + E P+ ++ R++
Sbjct: 62 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREE 112
>gi|33593752|ref|NP_881396.1| 30S ribosomal protein S6 [Bordetella pertussis Tohama I]
gi|161609278|ref|NP_888459.2| 30S ribosomal protein S6 [Bordetella bronchiseptica RB50]
gi|161610393|ref|NP_884697.2| 30S ribosomal protein S6 [Bordetella parapertussis 12822]
gi|61215726|sp|Q7VV89|RS6_BORPE RecName: Full=30S ribosomal protein S6
gi|61215731|sp|Q7W7P8|RS6_BORPA RecName: Full=30S ribosomal protein S6
gi|61215737|sp|Q7WL35|RS6_BORBR RecName: Full=30S ribosomal protein S6
gi|33563825|emb|CAE43069.1| 30s ribosomal protein s6 [Bordetella pertussis Tohama I]
gi|332383154|gb|AEE68001.1| 30S ribosomal protein S6 [Bordetella pertussis CS]
Length = 126
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQ+L+ G V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQALVTGQSGTVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ R ++ VLR L + +P++ ++ +R
Sbjct: 60 VCMNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAPAAPSIMMKSVER 108
>gi|325292470|ref|YP_004278334.1| 30S ribosomal protein S6 [Agrobacterium sp. H13-3]
gi|325060323|gb|ADY64014.1| 30S ribosomal protein S6 [Agrobacterium sp. H13-3]
Length = 153
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 16/137 (11%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDIS+QQ+ + QY+ +I+ GG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHIFLARQDISAQQVDALVEQYKGVIESFGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
M+I +P AIHE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAPAIHEIERQMRINEDVLRYMTIAVEAHEEGPSAMMQKRDRDDRPRRDGDRP 120
Query: 107 --HDRDDRNDRFPRDRN 121
R+DR R PR+
Sbjct: 121 DRGPREDRGPRAPREGG 137
>gi|304396941|ref|ZP_07378821.1| ribosomal protein S6 [Pantoea sp. aB]
gi|308188255|ref|YP_003932386.1| 30S ribosomal protein S6 [Pantoea vagans C9-1]
gi|304355737|gb|EFM20104.1| ribosomal protein S6 [Pantoea sp. aB]
gi|308058765|gb|ADO10937.1| 30S ribosomal protein S6 [Pantoea vagans C9-1]
Length = 131
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P AI E++ R ++ V+RS+ + V + + ++ + +R DR + F +
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRVKNAVTEASPMVKAKDERRDRREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ SEE
Sbjct: 120 SADESDAGDSEE 131
>gi|325981279|ref|YP_004293681.1| 30S ribosomal protein S6 [Nitrosomonas sp. AL212]
gi|325530798|gb|ADZ25519.1| ribosomal protein S6 [Nitrosomonas sp. AL212]
Length = 139
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRGIVTSKNGKVHRVEDWGRRQLAYLIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI ++++ + + +LR LTL P+ +++ +R +
Sbjct: 60 VLMNIECDQEILNDLDHAFKFSDAILRHLTLKTKGPVTEPSPMMRQVERAGSASLQDSEE 119
Query: 121 NVDRKQHVSEEKPL 134
D + S+E P+
Sbjct: 120 TAD--ETDSDETPV 131
>gi|253996554|ref|YP_003048618.1| 30S ribosomal protein S6 [Methylotenera mobilis JLW8]
gi|253983233|gb|ACT48091.1| ribosomal protein S6 [Methylotenera mobilis JLW8]
Length = 127
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++LI NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYRALITSNGGAIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR LT+ + +P+ ++
Sbjct: 60 VLMNIECNQTVLEELEHGFKFNDAVLRHLTMATKTAVTAPSPMMKEE 106
>gi|145600834|ref|YP_001164910.1| 30S ribosomal protein S6 [Yersinia pestis Pestoides F]
gi|166227404|sp|A4TRM5|RS6_YERPP RecName: Full=30S ribosomal protein S6
gi|145212530|gb|ABP41937.1| SSU ribosomal protein S6P [Yersinia pestis Pestoides F]
Length = 130
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPISKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + V + ++ D F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERHDFASEA 119
Query: 121 NVDRKQHVSEE 131
N D + SEE
Sbjct: 120 NDDSEAGDSEE 130
>gi|254248015|ref|ZP_04941336.1| Ribosomal protein S6 [Burkholderia cenocepacia PC184]
gi|124872791|gb|EAY64507.1| Ribosomal protein S6 [Burkholderia cenocepacia PC184]
Length = 133
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 10 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 69 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 117
>gi|91775679|ref|YP_545435.1| SSU ribosomal protein S6P [Methylobacillus flagellatus KT]
gi|123380513|sp|Q1H1P3|RS6_METFK RecName: Full=30S ribosomal protein S6
gi|91709666|gb|ABE49594.1| SSU ribosomal protein S6P [Methylobacillus flagellatus KT]
Length = 131
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRTLVTSNGGTIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI ++E++ + ++ VLR LTL D +P+ ++
Sbjct: 60 VLMNIEVSQEVLNELEHAFKFNDAVLRHLTLNTDEAVTAPSPMMKEE 106
>gi|222148136|ref|YP_002549093.1| 30S ribosomal protein S6 [Agrobacterium vitis S4]
gi|254765216|sp|B9JUU2|RS6_AGRVS RecName: Full=30S ribosomal protein S6
gi|221735124|gb|ACM36087.1| 30S ribosomal protein S6 [Agrobacterium vitis S4]
Length = 153
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 53/106 (50%), Positives = 82/106 (77%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ+ + QY+ +I+ NGG+V V G++++ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDMSAQQVDALVEQYKGVIEANGGKVGRVENWGLKSLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AA+HE++R+MRI+E+VLR +T+ V++HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEVERQMRINEDVLRYMTIAVEAHEEGPSAMMQK 106
>gi|152981661|ref|YP_001352991.1| 30S ribosomal protein S6 [Janthinobacterium sp. Marseille]
gi|166226973|sp|A6SXJ4|RS6_JANMA RecName: Full=30S ribosomal protein S6
gi|151281738|gb|ABR90148.1| small subunit ribosomal protein S6 [Janthinobacterium sp.
Marseille]
Length = 122
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG + V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTARGGVIHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR LT+ + E +P+ ++ ++D
Sbjct: 60 VCLNIECDGETLAEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKED 110
>gi|115351862|ref|YP_773701.1| 30S ribosomal protein S6 [Burkholderia ambifaria AMMD]
gi|134295904|ref|YP_001119639.1| 30S ribosomal protein S6 [Burkholderia vietnamiensis G4]
gi|170703444|ref|ZP_02894215.1| ribosomal protein S6 [Burkholderia ambifaria IOP40-10]
gi|171321590|ref|ZP_02910521.1| ribosomal protein S6 [Burkholderia ambifaria MEX-5]
gi|172060832|ref|YP_001808484.1| 30S ribosomal protein S6 [Burkholderia ambifaria MC40-6]
gi|122323036|sp|Q0BEQ6|RS6_BURCM RecName: Full=30S ribosomal protein S6
gi|166226812|sp|A4JEV1|RS6_BURVG RecName: Full=30S ribosomal protein S6
gi|226703430|sp|B1YRJ4|RS6_BURA4 RecName: Full=30S ribosomal protein S6
gi|115281850|gb|ABI87367.1| SSU ribosomal protein S6P [Burkholderia ambifaria AMMD]
gi|134139061|gb|ABO54804.1| SSU ribosomal protein S6P [Burkholderia vietnamiensis G4]
gi|170131642|gb|EDT00199.1| ribosomal protein S6 [Burkholderia ambifaria IOP40-10]
gi|171093123|gb|EDT38340.1| ribosomal protein S6 [Burkholderia ambifaria MEX-5]
gi|171993349|gb|ACB64268.1| ribosomal protein S6 [Burkholderia ambifaria MC40-6]
Length = 124
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|134095347|ref|YP_001100422.1| 30S ribosomal protein S6 [Herminiimonas arsenicoxydans]
gi|166226972|sp|A4G712|RS6_HERAR RecName: Full=30S ribosomal protein S6
gi|133739250|emb|CAL62299.1| 30S ribosomal subunit protein S6 [Herminiimonas arsenicoxydans]
Length = 122
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTARGGVVHRVEDWGRRQMAYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI + E++ + ++ VLR LT+ + E +P+ ++ ++D + R
Sbjct: 60 VCLNIECDGETLTEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKED-AAKSHRTE 118
Query: 121 NV 122
Sbjct: 119 AP 120
>gi|328544025|ref|YP_004304134.1| 30S ribosomal protein S6 [polymorphum gilvum SL003B-26A1]
gi|326413769|gb|ADZ70832.1| 30S ribosomal protein S6 [Polymorphum gilvum SL003B-26A1]
Length = 153
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 80/106 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + Q++ LI+ GG V + G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSTQQVEQLVDQFKGLIESGGGTVGKIENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AAI EM+R+M ++E++LR +T+ V++H+ P+ +Q+
Sbjct: 61 TLMNIDAPHAAIAEMERQMGLNEDILRFMTIKVEAHDDEPSAMMQK 106
>gi|56477751|ref|YP_159340.1| 30S ribosomal protein S6 [Aromatoleum aromaticum EbN1]
gi|81357242|sp|Q5P2M5|RS6_AZOSE RecName: Full=30S ribosomal protein S6
gi|56313794|emb|CAI08439.1| 30S Ribosomal protein S6 [Aromatoleum aromaticum EbN1]
Length = 128
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYKAIVTARNGQIHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A+ E++ + ++ VLR L + + +P+ ++ D
Sbjct: 60 VLMNIECDGEALGELEHAFKFNDAVLRHLVVKTKAAVTTPSPMMKEEKSRSLTAAPATDE 119
Query: 121 NVDRKQHVS 129
+ +
Sbjct: 120 AKPAEAESA 128
>gi|253999143|ref|YP_003051206.1| 30S ribosomal protein S6 [Methylovorus sp. SIP3-4]
gi|313201244|ref|YP_004039902.1| 30S ribosomal protein S6 [Methylovorus sp. MP688]
gi|253985822|gb|ACT50679.1| ribosomal protein S6 [Methylovorus sp. SIP3-4]
gi|312440560|gb|ADQ84666.1| ribosomal protein S6 [Methylovorus sp. MP688]
Length = 125
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ NGG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYRTLVTSNGGAIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR LT+ +P+ ++
Sbjct: 60 VLMNIECNQTVLEELEHAFKFNDAVLRHLTIATKEAVVAPSPMMKEE 106
>gi|237729129|ref|ZP_04559610.1| 30S ribosomal protein S6 [Citrobacter sp. 30_2]
gi|226908858|gb|EEH94776.1| 30S ribosomal protein S6 [Citrobacter sp. 30_2]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|296100963|ref|YP_003611109.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055422|gb|ADF60160.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295098347|emb|CBK87437.1| ribosomal protein S6 [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDSDAGDSEE 131
>gi|317402863|gb|EFV83405.1| 30S ribosomal protein S6 [Achromobacter xylosoxidans C54]
Length = 124
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ S+Q+ + +YQ+L+ GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHP-AQSEQVPAMVERYQALVTGQGGSVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI A + E++ R ++ VLR L + + +P++ ++ +R++
Sbjct: 60 VCLNIECGQATLDELEHSFRYNDAVLRHLVIKTKKAQTAPSIMMKSVEREE 110
>gi|333007701|gb|EGK27178.1| ribosomal protein S6 [Shigella flexneri VA-6]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MNI +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNIEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|188535073|ref|YP_001908870.1| 30S ribosomal protein S6 [Erwinia tasmaniensis Et1/99]
gi|292489608|ref|YP_003532498.1| 30S ribosomal protein S6 [Erwinia amylovora CFBP1430]
gi|292898171|ref|YP_003537540.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC 49946]
gi|226703466|sp|B2VCW1|RS6_ERWT9 RecName: Full=30S ribosomal protein S6
gi|188030115|emb|CAO98001.1| 30S ribosomal protein S6 [Erwinia tasmaniensis Et1/99]
gi|291198019|emb|CBJ45122.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC 49946]
gi|291555045|emb|CBA23118.1| 30S ribosomal protein S6 [Erwinia amylovora CFBP1430]
gi|310765320|gb|ADP10270.1| 30S ribosomal protein S6 [Erwinia sp. Ejp617]
gi|312173785|emb|CBX82039.1| 30S ribosomal protein S6 [Erwinia amylovora ATCC BAA-2158]
Length = 131
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 TSDDADAGDSEE 131
>gi|300691705|ref|YP_003752700.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum PSI07]
gi|299078765|emb|CBJ51425.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum PSI07]
Length = 122
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCMNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|107028947|ref|YP_626042.1| 30S ribosomal protein S6 [Burkholderia cenocepacia AU 1054]
gi|116689895|ref|YP_835518.1| 30S ribosomal protein S6 [Burkholderia cenocepacia HI2424]
gi|123179949|sp|Q1BH36|RS6_BURCA RecName: Full=30S ribosomal protein S6
gi|166226806|sp|A0K7Z8|RS6_BURCH RecName: Full=30S ribosomal protein S6
gi|105898111|gb|ABF81069.1| SSU ribosomal protein S6P [Burkholderia cenocepacia AU 1054]
gi|116647984|gb|ABK08625.1| SSU ribosomal protein S6P [Burkholderia cenocepacia HI2424]
Length = 124
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I +GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKTTITTHGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|188495956|ref|ZP_03003226.1| ribosomal protein S6 [Escherichia coli 53638]
gi|194439549|ref|ZP_03071623.1| ribosomal protein S6 [Escherichia coli 101-1]
gi|253775175|ref|YP_003038006.1| 30S ribosomal protein S6 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254164129|ref|YP_003047237.1| 30S ribosomal protein S6 [Escherichia coli B str. REL606]
gi|256025135|ref|ZP_05439000.1| 30S ribosomal protein S6 [Escherichia sp. 4_1_40B]
gi|297519432|ref|ZP_06937818.1| 30S ribosomal protein S6 [Escherichia coli OP50]
gi|300928017|ref|ZP_07143570.1| ribosomal protein S6 [Escherichia coli MS 187-1]
gi|301028023|ref|ZP_07191307.1| ribosomal protein S6 [Escherichia coli MS 196-1]
gi|301646648|ref|ZP_07246514.1| ribosomal protein S6 [Escherichia coli MS 146-1]
gi|188491155|gb|EDU66258.1| ribosomal protein S6 [Escherichia coli 53638]
gi|194421548|gb|EDX37561.1| ribosomal protein S6 [Escherichia coli 101-1]
gi|242379721|emb|CAQ34546.1| 30S ribosomal subunit protein S6, subunit of 30S ribosomal subunit
and ribosome [Escherichia coli BL21(DE3)]
gi|253326219|gb|ACT30821.1| ribosomal protein S6 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253976030|gb|ACT41701.1| 30S ribosomal protein S6 [Escherichia coli B str. REL606]
gi|253980186|gb|ACT45856.1| 30S ribosomal protein S6 [Escherichia coli BL21(DE3)]
gi|299878933|gb|EFI87144.1| ribosomal protein S6 [Escherichia coli MS 196-1]
gi|300463968|gb|EFK27461.1| ribosomal protein S6 [Escherichia coli MS 187-1]
gi|301075195|gb|EFK90001.1| ribosomal protein S6 [Escherichia coli MS 146-1]
gi|323940119|gb|EGB36313.1| ribosomal protein S6 [Escherichia coli E482]
gi|323970545|gb|EGB65804.1| ribosomal protein S6 [Escherichia coli TA007]
Length = 131
Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDADAGDSEE 131
>gi|311281254|ref|YP_003943485.1| ribosomal protein S6 [Enterobacter cloacae SCF1]
gi|308750449|gb|ADO50201.1| ribosomal protein S6 [Enterobacter cloacae SCF1]
Length = 131
Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ + I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLLNVEASQEVIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 TADDADAGDSEE 131
>gi|15804789|ref|NP_290830.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 EDL933]
gi|15834430|ref|NP_313203.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. Sakai]
gi|24115554|ref|NP_710064.1| 30S ribosomal protein S6 [Shigella flexneri 2a str. 301]
gi|26251098|ref|NP_757138.1| 30S ribosomal protein S6 [Escherichia coli CFT073]
gi|30065571|ref|NP_839742.1| 30S ribosomal protein S6 [Shigella flexneri 2a str. 2457T]
gi|74314681|ref|YP_313100.1| 30S ribosomal protein S6 [Shigella sonnei Ss046]
gi|82546558|ref|YP_410505.1| 30S ribosomal protein S6 [Shigella boydii Sb227]
gi|82779398|ref|YP_405747.1| 30S ribosomal protein S6 [Shigella dysenteriae Sd197]
gi|89110920|ref|AP_004700.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. W3110]
gi|91213749|ref|YP_543735.1| 30S ribosomal protein S6 [Escherichia coli UTI89]
gi|110808115|ref|YP_691635.1| 30S ribosomal protein S6 [Shigella flexneri 5 str. 8401]
gi|117626546|ref|YP_859869.1| 30S ribosomal protein S6 [Escherichia coli APEC O1]
gi|157157810|ref|YP_001465700.1| 30S ribosomal protein S6 [Escherichia coli E24377A]
gi|157163665|ref|YP_001460983.1| 30S ribosomal protein S6 [Escherichia coli HS]
gi|168751448|ref|ZP_02776470.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4113]
gi|168754772|ref|ZP_02779779.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4401]
gi|168760443|ref|ZP_02785450.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4501]
gi|168766480|ref|ZP_02791487.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4486]
gi|168774087|ref|ZP_02799094.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4196]
gi|168780633|ref|ZP_02805640.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4076]
gi|168784838|ref|ZP_02809845.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC869]
gi|168801856|ref|ZP_02826863.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC508]
gi|170021790|ref|YP_001726744.1| 30S ribosomal protein S6 [Escherichia coli ATCC 8739]
gi|170083646|ref|YP_001732966.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. DH10B]
gi|170682447|ref|YP_001746595.1| 30S ribosomal protein S6 [Escherichia coli SMS-3-5]
gi|170766562|ref|ZP_02901015.1| ribosomal protein S6 [Escherichia albertii TW07627]
gi|187734235|ref|YP_001882889.1| 30S ribosomal protein S6 [Shigella boydii CDC 3083-94]
gi|191165624|ref|ZP_03027464.1| ribosomal protein S6 [Escherichia coli B7A]
gi|191170756|ref|ZP_03032308.1| ribosomal protein S6 [Escherichia coli F11]
gi|193066024|ref|ZP_03047082.1| ribosomal protein S6 [Escherichia coli E22]
gi|193070872|ref|ZP_03051804.1| ribosomal protein S6 [Escherichia coli E110019]
gi|194426546|ref|ZP_03059100.1| ribosomal protein S6 [Escherichia coli B171]
gi|194434603|ref|ZP_03066860.1| ribosomal protein S6 [Shigella dysenteriae 1012]
gi|195935990|ref|ZP_03081372.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. EC4024]
gi|208809437|ref|ZP_03251774.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4206]
gi|208812869|ref|ZP_03254198.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4045]
gi|208818740|ref|ZP_03259060.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4042]
gi|209398367|ref|YP_002273742.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4115]
gi|209921690|ref|YP_002295774.1| 30S ribosomal protein S6 [Escherichia coli SE11]
gi|215489544|ref|YP_002331975.1| 30S ribosomal protein S6 [Escherichia coli O127:H6 str. E2348/69]
gi|217324465|ref|ZP_03440549.1| ribosomal protein S6 [Escherichia coli O157:H7 str. TW14588]
gi|218551470|ref|YP_002385262.1| 30S ribosomal protein S6 [Escherichia fergusonii ATCC 35469]
gi|218556752|ref|YP_002389666.1| 30S ribosomal protein S6 [Escherichia coli IAI1]
gi|218561359|ref|YP_002394272.1| 30S ribosomal protein S6 [Escherichia coli S88]
gi|218692583|ref|YP_002400795.1| 30S ribosomal protein S6 [Escherichia coli ED1a]
gi|218697951|ref|YP_002405618.1| 30S ribosomal protein S6 [Escherichia coli 55989]
gi|218702897|ref|YP_002410526.1| 30S ribosomal protein S6 [Escherichia coli IAI39]
gi|227886756|ref|ZP_04004561.1| ribosomal protein S6 [Escherichia coli 83972]
gi|237703868|ref|ZP_04534349.1| ribosomal protein S6 [Escherichia sp. 3_2_53FAA]
gi|238903307|ref|YP_002929103.1| 30S ribosomal subunit protein S6 [Escherichia coli BW2952]
gi|254037220|ref|ZP_04871297.1| 30S ribosomal subunit protein S6 [Escherichia sp. 1_1_43]
gi|254796219|ref|YP_003081056.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. TW14359]
gi|256019845|ref|ZP_05433710.1| 30S ribosomal protein S6 [Shigella sp. D9]
gi|260847030|ref|YP_003224808.1| 30S ribosomal subunit protein S6 [Escherichia coli O103:H2 str.
12009]
gi|260858352|ref|YP_003232243.1| 30S ribosomal subunit protein S6 [Escherichia coli O26:H11 str.
11368]
gi|260870892|ref|YP_003237294.1| 30S ribosomal subunit protein S6 [Escherichia coli O111:H- str.
11128]
gi|261225320|ref|ZP_05939601.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255428|ref|ZP_05947961.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
FRIK966]
gi|291285612|ref|YP_003502430.1| Ribosomal protein S6 [Escherichia coli O55:H7 str. CB9615]
gi|293407925|ref|ZP_06651765.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417703|ref|ZP_06660325.1| 30S ribosomal protein S6 [Escherichia coli B185]
gi|293476509|ref|ZP_06664917.1| 30S ribosomal protein S6 [Escherichia coli B088]
gi|296044035|ref|NP_418621.5| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|300816498|ref|ZP_07096719.1| ribosomal protein S6 [Escherichia coli MS 107-1]
gi|300821294|ref|ZP_07101442.1| ribosomal protein S6 [Escherichia coli MS 119-7]
gi|300906030|ref|ZP_07123754.1| ribosomal protein S6 [Escherichia coli MS 84-1]
gi|300918338|ref|ZP_07134939.1| ribosomal protein S6 [Escherichia coli MS 115-1]
gi|300922392|ref|ZP_07138512.1| ribosomal protein S6 [Escherichia coli MS 182-1]
gi|300940687|ref|ZP_07155248.1| ribosomal protein S6 [Escherichia coli MS 21-1]
gi|300949167|ref|ZP_07163209.1| ribosomal protein S6 [Escherichia coli MS 116-1]
gi|300955264|ref|ZP_07167657.1| ribosomal protein S6 [Escherichia coli MS 175-1]
gi|300987234|ref|ZP_07178063.1| ribosomal protein S6 [Escherichia coli MS 45-1]
gi|300988552|ref|ZP_07178748.1| ribosomal protein S6 [Escherichia coli MS 200-1]
gi|301024524|ref|ZP_07188199.1| ribosomal protein S6 [Escherichia coli MS 69-1]
gi|301045966|ref|ZP_07193149.1| ribosomal protein S6 [Escherichia coli MS 185-1]
gi|301302617|ref|ZP_07208747.1| ribosomal protein S6 [Escherichia coli MS 124-1]
gi|301325965|ref|ZP_07219386.1| ribosomal protein S6 [Escherichia coli MS 78-1]
gi|306815585|ref|ZP_07449734.1| 30S ribosomal protein S6 [Escherichia coli NC101]
gi|307140897|ref|ZP_07500253.1| 30S ribosomal protein S6 [Escherichia coli H736]
gi|307314851|ref|ZP_07594443.1| ribosomal protein S6 [Escherichia coli W]
gi|309787732|ref|ZP_07682343.1| ribosomal protein S6 [Shigella dysenteriae 1617]
gi|309797012|ref|ZP_07691412.1| ribosomal protein S6 [Escherichia coli MS 145-7]
gi|312965874|ref|ZP_07780100.1| ribosomal protein S6 [Escherichia coli 2362-75]
gi|312973991|ref|ZP_07788162.1| ribosomal protein S6 [Escherichia coli 1827-70]
gi|331644952|ref|ZP_08346069.1| ribosomal protein S6 [Escherichia coli H736]
gi|331650325|ref|ZP_08351397.1| ribosomal protein S6 [Escherichia coli M605]
gi|331656029|ref|ZP_08357017.1| ribosomal protein S6 [Escherichia coli M718]
gi|331660775|ref|ZP_08361707.1| ribosomal protein S6 [Escherichia coli TA206]
gi|331665864|ref|ZP_08366758.1| ribosomal protein S6 [Escherichia coli TA143]
gi|331671109|ref|ZP_08371942.1| ribosomal protein S6 [Escherichia coli TA271]
gi|331671352|ref|ZP_08372150.1| ribosomal protein S6 [Escherichia coli TA280]
gi|331680330|ref|ZP_08380989.1| ribosomal protein S6 [Escherichia coli H591]
gi|331681219|ref|ZP_08381856.1| ribosomal protein S6 [Escherichia coli H299]
gi|332280985|ref|ZP_08393398.1| 30S ribosomal subunit protein S6 [Shigella sp. D9]
gi|61236240|sp|P0A4D0|RS6_ECOL6 RecName: Full=30S ribosomal protein S6
gi|61236246|sp|P0A4D1|RS6_ECO57 RecName: Full=30S ribosomal protein S6
gi|61236252|sp|P0A4D2|RS6_SHIFL RecName: Full=30S ribosomal protein S6
gi|91207789|sp|Q31TD1|RS6_SHIBS RecName: Full=30S ribosomal protein S6
gi|91207790|sp|Q328J9|RS6_SHIDS RecName: Full=30S ribosomal protein S6
gi|91207791|sp|Q3YUE7|RS6_SHISS RecName: Full=30S ribosomal protein S6
gi|122421451|sp|Q1R360|RS6_ECOUT RecName: Full=30S ribosomal protein S6
gi|122956957|sp|Q0SX85|RS6_SHIF8 RecName: Full=30S ribosomal protein S6
gi|166226828|sp|A1AJA5|RS6_ECOK1 RecName: Full=30S ribosomal protein S6
gi|167011244|sp|A7ZV71|RS6_ECO24 RecName: Full=30S ribosomal protein S6
gi|167011245|sp|A8A7U6|RS6_ECOHS RecName: Full=30S ribosomal protein S6
gi|189045466|sp|B1IT06|RS6_ECOLC RecName: Full=30S ribosomal protein S6
gi|226695261|sp|B2TY73|RS6_SHIB3 RecName: Full=30S ribosomal protein S6
gi|226703457|sp|B7MLK5|RS6_ECO45 RecName: Full=30S ribosomal protein S6
gi|226703458|sp|B5Z2K6|RS6_ECO5E RecName: Full=30S ribosomal protein S6
gi|226703459|sp|B7NTQ6|RS6_ECO7I RecName: Full=30S ribosomal protein S6
gi|226703460|sp|B7M9G2|RS6_ECO8A RecName: Full=30S ribosomal protein S6
gi|226703461|sp|B1XDV1|RS6_ECODH RecName: Full=30S ribosomal protein S6
gi|226703463|sp|B6I2A6|RS6_ECOSE RecName: Full=30S ribosomal protein S6
gi|226703464|sp|B1LQM0|RS6_ECOSM RecName: Full=30S ribosomal protein S6
gi|226703467|sp|B7LLY2|RS6_ESCF3 RecName: Full=30S ribosomal protein S6
gi|254765436|sp|B7UQK9|RS6_ECO27 RecName: Full=30S ribosomal protein S6
gi|254765437|sp|B7LCQ6|RS6_ECO55 RecName: Full=30S ribosomal protein S6
gi|254765438|sp|B7MST0|RS6_ECO81 RecName: Full=30S ribosomal protein S6
gi|259495332|sp|C4ZR77|RS6_ECOBW RecName: Full=30S ribosomal protein S6
gi|12519191|gb|AAG59396.1|AE005652_13 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
EDL933]
gi|26111530|gb|AAN83712.1|AE016771_223 30S ribosomal protein S6 [Escherichia coli CFT073]
gi|42845|emb|CAA27652.1| unnamed protein product [Escherichia coli]
gi|537041|gb|AAA97096.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|13364653|dbj|BAB38599.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
Sakai]
gi|24054885|gb|AAN45771.1| 30S ribosomal subunit protein S6 [Shigella flexneri 2a str. 301]
gi|30043835|gb|AAP19554.1| 30S ribosomal subunit protein S6 [Shigella flexneri 2a str. 2457T]
gi|73858158|gb|AAZ90865.1| 30S ribosomal subunit protein S6 [Shigella sonnei Ss046]
gi|81243546|gb|ABB64256.1| 30S ribosomal subunit protein S6 [Shigella dysenteriae Sd197]
gi|81247969|gb|ABB68677.1| 30S ribosomal subunit protein S6 [Shigella boydii Sb227]
gi|85676951|dbj|BAE78201.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K12 substr.
W3110]
gi|91075323|gb|ABE10204.1| 30S ribosomal protein S6 [Escherichia coli UTI89]
gi|110617663|gb|ABF06330.1| 30S ribosomal subunit protein S6 [Shigella flexneri 5 str. 8401]
gi|115515670|gb|ABJ03745.1| 30S ribosomal subunit protein S6 [Escherichia coli APEC O1]
gi|157069345|gb|ABV08600.1| ribosomal protein S6 [Escherichia coli HS]
gi|157079840|gb|ABV19548.1| ribosomal protein S6 [Escherichia coli E24377A]
gi|169756718|gb|ACA79417.1| ribosomal protein S6 [Escherichia coli ATCC 8739]
gi|169891481|gb|ACB05188.1| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. DH10B]
gi|170124000|gb|EDS92931.1| ribosomal protein S6 [Escherichia albertii TW07627]
gi|170520165|gb|ACB18343.1| ribosomal protein S6 [Escherichia coli SMS-3-5]
gi|187431227|gb|ACD10501.1| ribosomal protein S6 [Shigella boydii CDC 3083-94]
gi|187770274|gb|EDU34118.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4196]
gi|188014482|gb|EDU52604.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4113]
gi|189001825|gb|EDU70811.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4076]
gi|189357892|gb|EDU76311.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4401]
gi|189363927|gb|EDU82346.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4486]
gi|189368955|gb|EDU87371.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4501]
gi|189375098|gb|EDU93514.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC869]
gi|189376062|gb|EDU94478.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC508]
gi|190904319|gb|EDV64028.1| ribosomal protein S6 [Escherichia coli B7A]
gi|190908980|gb|EDV68567.1| ribosomal protein S6 [Escherichia coli F11]
gi|192926347|gb|EDV80983.1| ribosomal protein S6 [Escherichia coli E22]
gi|192955818|gb|EDV86289.1| ribosomal protein S6 [Escherichia coli E110019]
gi|194415285|gb|EDX31553.1| ribosomal protein S6 [Escherichia coli B171]
gi|194417188|gb|EDX33300.1| ribosomal protein S6 [Shigella dysenteriae 1012]
gi|208729238|gb|EDZ78839.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4206]
gi|208734146|gb|EDZ82833.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4045]
gi|208738863|gb|EDZ86545.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4042]
gi|209159767|gb|ACI37200.1| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4115]
gi|209750008|gb|ACI73311.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750010|gb|ACI73312.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750012|gb|ACI73313.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209750016|gb|ACI73315.1| 30S ribosomal subunit protein S6 [Escherichia coli]
gi|209914949|dbj|BAG80023.1| 30S ribosomal protein S6 [Escherichia coli SE11]
gi|215267616|emb|CAS12071.1| 30S ribosomal subunit protein S6 [Escherichia coli O127:H6 str.
E2348/69]
gi|217320686|gb|EEC29110.1| ribosomal protein S6 [Escherichia coli O157:H7 str. TW14588]
gi|218354683|emb|CAV01699.1| 30S ribosomal subunit protein S6 [Escherichia coli 55989]
gi|218359012|emb|CAQ91672.1| 30S ribosomal subunit protein S6 [Escherichia fergusonii ATCC
35469]
gi|218363521|emb|CAR01175.1| 30S ribosomal subunit protein S6 [Escherichia coli IAI1]
gi|218368128|emb|CAR05935.1| 30S ribosomal subunit protein S6 [Escherichia coli S88]
gi|218372883|emb|CAR20763.1| 30S ribosomal subunit protein S6 [Escherichia coli IAI39]
gi|218430147|emb|CAR11005.1| 30S ribosomal subunit protein S6 [Escherichia coli ED1a]
gi|222035970|emb|CAP78715.1| 30S ribosomal protein S6 [Escherichia coli LF82]
gi|226840326|gb|EEH72328.1| 30S ribosomal subunit protein S6 [Escherichia sp. 1_1_43]
gi|226901780|gb|EEH88039.1| ribosomal protein S6 [Escherichia sp. 3_2_53FAA]
gi|227836329|gb|EEJ46795.1| ribosomal protein S6 [Escherichia coli 83972]
gi|238859801|gb|ACR61799.1| 30S ribosomal subunit protein S6 [Escherichia coli BW2952]
gi|254595619|gb|ACT74980.1| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str.
TW14359]
gi|257757001|dbj|BAI28503.1| 30S ribosomal subunit protein S6 [Escherichia coli O26:H11 str.
11368]
gi|257762177|dbj|BAI33674.1| 30S ribosomal subunit protein S6 [Escherichia coli O103:H2 str.
12009]
gi|257767248|dbj|BAI38743.1| 30S ribosomal subunit protein S6 [Escherichia coli O111:H- str.
11128]
gi|260450973|gb|ACX41395.1| ribosomal protein S6 [Escherichia coli DH1]
gi|281181296|dbj|BAI57626.1| 30S ribosomal protein S6 [Escherichia coli SE15]
gi|284924380|emb|CBG37502.1| 30S ribosomal subunit protein S6 [Escherichia coli 042]
gi|290765485|gb|ADD59446.1| Ribosomal protein S6 [Escherichia coli O55:H7 str. CB9615]
gi|291320962|gb|EFE60404.1| 30S ribosomal protein S6 [Escherichia coli B088]
gi|291430421|gb|EFF03419.1| 30S ribosomal protein S6 [Escherichia coli B185]
gi|291472176|gb|EFF14658.1| conserved hypothetical protein [Escherichia coli B354]
gi|294491735|gb|ADE90491.1| ribosomal protein S6 [Escherichia coli IHE3034]
gi|296040586|gb|AAC77157.5| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12
substr. MG1655]
gi|300302009|gb|EFJ58394.1| ribosomal protein S6 [Escherichia coli MS 185-1]
gi|300305898|gb|EFJ60418.1| ribosomal protein S6 [Escherichia coli MS 200-1]
gi|300317841|gb|EFJ67625.1| ribosomal protein S6 [Escherichia coli MS 175-1]
gi|300396523|gb|EFJ80061.1| ribosomal protein S6 [Escherichia coli MS 69-1]
gi|300402197|gb|EFJ85735.1| ribosomal protein S6 [Escherichia coli MS 84-1]
gi|300407711|gb|EFJ91249.1| ribosomal protein S6 [Escherichia coli MS 45-1]
gi|300414470|gb|EFJ97780.1| ribosomal protein S6 [Escherichia coli MS 115-1]
gi|300421211|gb|EFK04522.1| ribosomal protein S6 [Escherichia coli MS 182-1]
gi|300451415|gb|EFK15035.1| ribosomal protein S6 [Escherichia coli MS 116-1]
gi|300454575|gb|EFK18068.1| ribosomal protein S6 [Escherichia coli MS 21-1]
gi|300526183|gb|EFK47252.1| ribosomal protein S6 [Escherichia coli MS 119-7]
gi|300530728|gb|EFK51790.1| ribosomal protein S6 [Escherichia coli MS 107-1]
gi|300842142|gb|EFK69902.1| ribosomal protein S6 [Escherichia coli MS 124-1]
gi|300847318|gb|EFK75078.1| ribosomal protein S6 [Escherichia coli MS 78-1]
gi|305851247|gb|EFM51702.1| 30S ribosomal protein S6 [Escherichia coli NC101]
gi|306905654|gb|EFN36183.1| ribosomal protein S6 [Escherichia coli W]
gi|307556367|gb|ADN49142.1| 30S ribosomal subunit protein S6 [Escherichia coli ABU 83972]
gi|307629272|gb|ADN73576.1| 30S ribosomal protein S6 [Escherichia coli UM146]
gi|308119425|gb|EFO56687.1| ribosomal protein S6 [Escherichia coli MS 145-7]
gi|308924482|gb|EFP69978.1| ribosomal protein S6 [Shigella dysenteriae 1617]
gi|309704704|emb|CBJ04055.1| 30S ribosomal subunit protein S6 [Escherichia coli ETEC H10407]
gi|310331525|gb|EFP98781.1| ribosomal protein S6 [Escherichia coli 1827-70]
gi|312289117|gb|EFR17011.1| ribosomal protein S6 [Escherichia coli 2362-75]
gi|312948850|gb|ADR29677.1| 30S ribosomal protein S6 [Escherichia coli O83:H1 str. NRG 857C]
gi|315063514|gb|ADT77841.1| 30S ribosomal subunit protein S6 [Escherichia coli W]
gi|315138754|dbj|BAJ45913.1| ribosomal protein S6 [Escherichia coli DH1]
gi|315255545|gb|EFU35513.1| ribosomal protein S6 [Escherichia coli MS 85-1]
gi|315288481|gb|EFU47879.1| ribosomal protein S6 [Escherichia coli MS 110-3]
gi|315293517|gb|EFU52869.1| ribosomal protein S6 [Escherichia coli MS 153-1]
gi|315299081|gb|EFU58335.1| ribosomal protein S6 [Escherichia coli MS 16-3]
gi|315617609|gb|EFU98215.1| ribosomal protein S6 [Escherichia coli 3431]
gi|320176374|gb|EFW51429.1| SSU ribosomal protein S6p [Shigella dysenteriae CDC 74-1112]
gi|320177566|gb|EFW52556.1| SSU ribosomal protein S6p [Shigella boydii ATCC 9905]
gi|320187350|gb|EFW62044.1| SSU ribosomal protein S6p [Shigella flexneri CDC 796-83]
gi|320190670|gb|EFW65320.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. EC1212]
gi|320193686|gb|EFW68321.1| SSU ribosomal protein S6p [Escherichia coli WV_060327]
gi|320200671|gb|EFW75257.1| SSU ribosomal protein S6p [Escherichia coli EC4100B]
gi|320638958|gb|EFX08604.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. G5101]
gi|320644327|gb|EFX13392.1| 30S ribosomal protein S6 [Escherichia coli O157:H- str. 493-89]
gi|320649645|gb|EFX18169.1| 30S ribosomal protein S6 [Escherichia coli O157:H- str. H 2687]
gi|320655041|gb|EFX23002.1| 30S ribosomal protein S6 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660548|gb|EFX28009.1| 30S ribosomal protein S6 [Escherichia coli O55:H7 str. USDA 5905]
gi|320665817|gb|EFX32854.1| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. LSU-61]
gi|323155982|gb|EFZ42144.1| ribosomal protein S6 [Escherichia coli EPECa14]
gi|323161992|gb|EFZ47864.1| ribosomal protein S6 [Escherichia coli E128010]
gi|323166684|gb|EFZ52442.1| ribosomal protein S6 [Shigella sonnei 53G]
gi|323171639|gb|EFZ57285.1| ribosomal protein S6 [Escherichia coli LT-68]
gi|323176041|gb|EFZ61633.1| ribosomal protein S6 [Escherichia coli 1180]
gi|323182306|gb|EFZ67716.1| ribosomal protein S6 [Escherichia coli 1357]
gi|323189921|gb|EFZ75199.1| ribosomal protein S6 [Escherichia coli RN587/1]
gi|323380407|gb|ADX52675.1| ribosomal protein S6 [Escherichia coli KO11]
gi|323935325|gb|EGB31673.1| ribosomal protein S6 [Escherichia coli E1520]
gi|323946049|gb|EGB42086.1| ribosomal protein S6 [Escherichia coli H120]
gi|323950731|gb|EGB46609.1| ribosomal protein S6 [Escherichia coli H252]
gi|323955487|gb|EGB51251.1| ribosomal protein S6 [Escherichia coli H263]
gi|323960244|gb|EGB55885.1| ribosomal protein S6 [Escherichia coli H489]
gi|323965587|gb|EGB61041.1| ribosomal protein S6 [Escherichia coli M863]
gi|323975458|gb|EGB70559.1| ribosomal protein S6 [Escherichia coli TW10509]
gi|324005264|gb|EGB74483.1| ribosomal protein S6 [Escherichia coli MS 57-2]
gi|324013800|gb|EGB83019.1| ribosomal protein S6 [Escherichia coli MS 60-1]
gi|324019378|gb|EGB88597.1| ribosomal protein S6 [Escherichia coli MS 117-3]
gi|324112203|gb|EGC06181.1| ribosomal protein S6 [Escherichia fergusonii B253]
gi|324118766|gb|EGC12658.1| ribosomal protein S6 [Escherichia coli E1167]
gi|325499735|gb|EGC97594.1| 30S ribosomal protein S6 [Escherichia fergusonii ECD227]
gi|326345470|gb|EGD69213.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. 1125]
gi|326346673|gb|EGD70407.1| SSU ribosomal protein S6p [Escherichia coli O157:H7 str. 1044]
gi|327250141|gb|EGE61860.1| ribosomal protein S6 [Escherichia coli STEC_7v]
gi|330908542|gb|EGH37061.1| SSU ribosomal protein S6p [Escherichia coli AA86]
gi|331035927|gb|EGI08165.1| ribosomal protein S6 [Escherichia coli H736]
gi|331040719|gb|EGI12877.1| ribosomal protein S6 [Escherichia coli M605]
gi|331046383|gb|EGI18473.1| ribosomal protein S6 [Escherichia coli M718]
gi|331051817|gb|EGI23856.1| ribosomal protein S6 [Escherichia coli TA206]
gi|331056915|gb|EGI28909.1| ribosomal protein S6 [Escherichia coli TA143]
gi|331061698|gb|EGI33624.1| ribosomal protein S6 [Escherichia coli TA271]
gi|331071197|gb|EGI42554.1| ribosomal protein S6 [Escherichia coli TA280]
gi|331071793|gb|EGI43129.1| ribosomal protein S6 [Escherichia coli H591]
gi|331081440|gb|EGI52601.1| ribosomal protein S6 [Escherichia coli H299]
gi|332083202|gb|EGI88433.1| ribosomal protein S6 [Shigella boydii 5216-82]
gi|332087226|gb|EGI92360.1| ribosomal protein S6 [Shigella boydii 3594-74]
gi|332103337|gb|EGJ06683.1| 30S ribosomal subunit protein S6 [Shigella sp. D9]
gi|332346282|gb|AEE59616.1| ribosomal protein S6 RpsF [Escherichia coli UMNK88]
gi|332749077|gb|EGJ79500.1| ribosomal protein S6 [Shigella flexneri K-671]
gi|332761886|gb|EGJ92160.1| ribosomal protein S6 [Shigella flexneri 2747-71]
gi|333009462|gb|EGK28918.1| ribosomal protein S6 [Shigella flexneri K-218]
gi|333011182|gb|EGK30596.1| ribosomal protein S6 [Shigella flexneri K-272]
gi|333012624|gb|EGK32004.1| ribosomal protein S6 [Shigella flexneri K-227]
gi|333022264|gb|EGK41502.1| ribosomal protein S6 [Shigella flexneri K-304]
Length = 131
Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|218707811|ref|YP_002415330.1| 30S ribosomal protein S6 [Escherichia coli UMN026]
gi|293402825|ref|ZP_06646922.1| 30S ribosomal protein S6 [Escherichia coli FVEC1412]
gi|298378354|ref|ZP_06988238.1| small subunit ribosomal protein S6 [Escherichia coli FVEC1302]
gi|300899739|ref|ZP_07117964.1| ribosomal protein S6 [Escherichia coli MS 198-1]
gi|226703462|sp|B7NGD4|RS6_ECOLU RecName: Full=30S ribosomal protein S6
gi|218434908|emb|CAR15846.1| 30S ribosomal subunit protein S6 [Escherichia coli UMN026]
gi|291429740|gb|EFF02754.1| 30S ribosomal protein S6 [Escherichia coli FVEC1412]
gi|298280688|gb|EFI22189.1| small subunit ribosomal protein S6 [Escherichia coli FVEC1302]
gi|300356711|gb|EFJ72581.1| ribosomal protein S6 [Escherichia coli MS 198-1]
Length = 131
Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TTDDAEAGDSEE 131
>gi|90408974|ref|ZP_01217106.1| 30S ribosomal protein S6 [Psychromonas sp. CNPT3]
gi|90309922|gb|EAS38075.1| 30S ribosomal protein S6 [Psychromonas sp. CNPT3]
Length = 130
Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVNGMIERYTTSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MNI + + +++ R ++ V+R++ + + ++ + R +R +R DR PR
Sbjct: 60 VLMNIEAEQNVLDDLENAFRFNDAVIRTMIMRTKTAVTEASVVAKAREERSERADRAPRA 119
Query: 120 RNVDRKQHVS 129
+ + +
Sbjct: 120 PRPEARTETT 129
>gi|296285059|ref|ZP_06863057.1| 30S ribosomal protein S6 [Citromicrobium bathyomarinum JL354]
Length = 123
Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 80/123 (65%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ Q +I+ N G+V G++ +AY+I +NRKA++
Sbjct: 1 MALYEHVFLARQDLSQSQVDALAAQATEIIESNEGKVTKTETWGLKNLAYKIDRNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P A + E++R+ RI+E+V+R +T+ VD HE+ P+ +++++RD + R DR
Sbjct: 61 VLLNIEGPGAMVAELERQTRINEDVIRYMTIRVDEHEEGPSAMMRKNERDSKKRRERSDR 120
Query: 121 NVD 123
D
Sbjct: 121 GDD 123
>gi|227821460|ref|YP_002825430.1| 30S ribosomal protein S6 [Sinorhizobium fredii NGR234]
gi|254765448|sp|C3M9B1|RS6_RHISN RecName: Full=30S ribosomal protein S6
gi|227340459|gb|ACP24677.1| 30S ribosomal protein S6 [Sinorhizobium fredii NGR234]
Length = 149
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 81/106 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + QY+ +++ NGG+V V G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDITPQQVDALVEQYKGVLEANGGKVGRVENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V M+I +P A+HE++R+MRI+E++LR +T+ V+ HE+ P+ +Q+
Sbjct: 61 VLMDIDAPAPAVHEVERQMRINEDILRYMTIAVEKHEEGPSAMMQK 106
>gi|320539667|ref|ZP_08039331.1| 30S ribosomal subunit protein S6 [Serratia symbiotica str. Tucson]
gi|320030279|gb|EFW12294.1| 30S ribosomal subunit protein S6 [Serratia symbiotica str. Tucson]
Length = 132
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +N+ +P AI E++ ++ V+RS+ + V E SP + + R DR + F
Sbjct: 60 VLLNVEAPQEAIDELETNFHFNDAVIRSMVMRVKHAVTEASPMVKAKDERRGDRREDFAN 119
Query: 119 DRNVDRKQHVSEE 131
+ D SEE
Sbjct: 120 ETADDVDAGDSEE 132
>gi|16763208|ref|NP_458825.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16767637|ref|NP_463252.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144687|ref|NP_808029.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56416182|ref|YP_153257.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62182835|ref|YP_219252.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|156932421|ref|YP_001436337.1| 30S ribosomal protein S6 [Cronobacter sakazakii ATCC BAA-894]
gi|161617663|ref|YP_001591628.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168263255|ref|ZP_02685228.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168464724|ref|ZP_02698627.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443034|ref|YP_002043644.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450923|ref|YP_002048433.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471096|ref|ZP_03077080.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194735616|ref|YP_002117331.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197251398|ref|YP_002149305.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197262329|ref|ZP_03162403.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197365105|ref|YP_002144742.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|200389133|ref|ZP_03215745.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204926729|ref|ZP_03217931.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205355146|ref|YP_002228947.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859536|ref|YP_002246187.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213028574|ref|ZP_03343021.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213161637|ref|ZP_03347347.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213428643|ref|ZP_03361393.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213609730|ref|ZP_03369556.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213648999|ref|ZP_03379052.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213864945|ref|ZP_03387064.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224586230|ref|YP_002640029.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910548|ref|ZP_04654385.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|260599462|ref|YP_003212033.1| 30S ribosomal protein S6 [Cronobacter turicensis z3032]
gi|283786874|ref|YP_003366739.1| 30S ribosomal subunit protein S6 [Citrobacter rodentium ICC168]
gi|54039532|sp|P66594|RS6_SALTI RecName: Full=30S ribosomal protein S6
gi|54041975|sp|P66593|RS6_SALTY RecName: Full=30S ribosomal protein S6
gi|75478846|sp|Q57GJ1|RS6_SALCH RecName: Full=30S ribosomal protein S6
gi|81599615|sp|Q5PJ58|RS6_SALPA RecName: Full=30S ribosomal protein S6
gi|166226829|sp|A7MM76|RS6_ENTS8 RecName: Full=30S ribosomal protein S6
gi|189045492|sp|A9N518|RS6_SALPB RecName: Full=30S ribosomal protein S6
gi|226695123|sp|B5F3B7|RS6_SALA4 RecName: Full=30S ribosomal protein S6
gi|226695125|sp|B5R0R8|RS6_SALEP RecName: Full=30S ribosomal protein S6
gi|226695126|sp|B5R9E8|RS6_SALG2 RecName: Full=30S ribosomal protein S6
gi|226695127|sp|B4TFD5|RS6_SALHS RecName: Full=30S ribosomal protein S6
gi|226695128|sp|B4T3F1|RS6_SALNS RecName: Full=30S ribosomal protein S6
gi|226695129|sp|B5BKK9|RS6_SALPK RecName: Full=30S ribosomal protein S6
gi|226695130|sp|B4TT33|RS6_SALSV RecName: Full=30S ribosomal protein S6
gi|254765451|sp|C0Q6F8|RS6_SALPC RecName: Full=30S ribosomal protein S6
gi|25294538|pir||AG1052 30s ribosomal protein S6 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422953|gb|AAL23211.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505516|emb|CAD06868.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140326|gb|AAO71889.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130439|gb|AAV79945.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62130468|gb|AAX68171.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|156530675|gb|ABU75501.1| hypothetical protein ESA_00200 [Cronobacter sakazakii ATCC BAA-894]
gi|161367027|gb|ABX70795.1| hypothetical protein SPAB_05526 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401697|gb|ACF61919.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194409227|gb|ACF69446.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194457460|gb|EDX46299.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194711118|gb|ACF90339.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195632912|gb|EDX51366.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197096582|emb|CAR62194.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197215101|gb|ACH52498.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197240584|gb|EDY23204.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|199606231|gb|EDZ04776.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204323394|gb|EDZ08589.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205274927|emb|CAR39996.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205348027|gb|EDZ34658.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206711339|emb|CAR35717.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224470758|gb|ACN48588.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|260218639|emb|CBA33949.1| 30S ribosomal protein S6 [Cronobacter turicensis z3032]
gi|261249481|emb|CBG27346.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996725|gb|ACY91610.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|282950328|emb|CBG89975.1| 30S ribosomal subunit protein S6 [Citrobacter rodentium ICC168]
gi|301160878|emb|CBW20410.1| 30s ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915488|dbj|BAJ39462.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320088817|emb|CBY98575.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222645|gb|EFX47717.1| SSU ribosomal protein S6p [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615553|gb|EFY12473.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618613|gb|EFY15502.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322621974|gb|EFY18824.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627698|gb|EFY24489.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631005|gb|EFY27769.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637776|gb|EFY34477.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642338|gb|EFY38943.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322643991|gb|EFY40539.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650934|gb|EFY47319.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653577|gb|EFY49905.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659762|gb|EFY56005.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662027|gb|EFY58243.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666224|gb|EFY62402.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672644|gb|EFY68755.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676074|gb|EFY72145.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680558|gb|EFY76596.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684548|gb|EFY80552.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322717337|gb|EFZ08908.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132728|gb|ADX20158.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192863|gb|EFZ78089.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197261|gb|EFZ82401.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201622|gb|EFZ86686.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206136|gb|EFZ91098.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213144|gb|EFZ97946.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215518|gb|EGA00262.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219503|gb|EGA03988.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227806|gb|EGA11960.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228976|gb|EGA13105.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236412|gb|EGA20488.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238683|gb|EGA22735.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241866|gb|EGA25895.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247985|gb|EGA31922.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254684|gb|EGA38495.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258257|gb|EGA41934.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263597|gb|EGA47118.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265807|gb|EGA49303.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270251|gb|EGA53699.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326630304|gb|EGE36647.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332991202|gb|AEF10185.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 131
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|161505108|ref|YP_001572219.1| 30S ribosomal protein S6 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189045491|sp|A9MFL1|RS6_SALAR RecName: Full=30S ribosomal protein S6
gi|160866455|gb|ABX23078.1| hypothetical protein SARI_03242 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 131
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMIMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|17546026|ref|NP_519428.1| 30S ribosomal protein S6 [Ralstonia solanacearum GMI1000]
gi|24212307|sp|Q8XZT8|RS6_RALSO RecName: Full=30S ribosomal protein S6
gi|17428321|emb|CAD15009.1| probable 30s ribosomal protein s6 [Ralstonia solanacearum GMI1000]
gi|299067359|emb|CBJ38558.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum CMR15]
Length = 122
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCVNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|288958518|ref|YP_003448859.1| small subunit ribosomal protein S6 [Azospirillum sp. B510]
gi|288910826|dbj|BAI72315.1| small subunit ribosomal protein S6 [Azospirillum sp. B510]
Length = 146
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + RQDIS+ Q + Q+ ++++NGG + G++T+ Y+I+KNRK +Y
Sbjct: 1 MALYECVLIARQDISAAQAEQLSEQFAQIVRDNGGTIAKSEYWGLKTLTYKIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ----RHDRDDRNDRF 116
NI +P AA+ EM+R M I E+VLR +T+ VD+ + +P+ +Q R +R +R DR
Sbjct: 61 TLFNIDAPAAAVAEMERNMSISEDVLRFMTVRVDALDANPSAMMQSRNERGERGERGDRG 120
Query: 117 PR--DRNVDRKQHVSE 130
PR D R E
Sbjct: 121 PRRFDDRGPRPPRRQE 136
>gi|329297943|ref|ZP_08255279.1| 30S ribosomal protein S6 [Plautia stali symbiont]
Length = 131
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MCHYEIVFMVHPD-QSEQVPGMIERYTGAITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 120 SAEDSDAGDSEE 131
>gi|330817225|ref|YP_004360930.1| 30S ribosomal protein S6 [Burkholderia gladioli BSR3]
gi|327369618|gb|AEA60974.1| 30S ribosomal protein S6 [Burkholderia gladioli BSR3]
Length = 124
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITTRGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI A + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCLNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|73541694|ref|YP_296214.1| 30S ribosomal protein S6 [Ralstonia eutropha JMP134]
gi|91207785|sp|Q46ZR3|RS6_RALEJ RecName: Full=30S ribosomal protein S6
gi|72119107|gb|AAZ61370.1| SSU ribosomal protein S6P [Ralstonia eutropha JMP134]
Length = 124
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+SL+ GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSLVTSQGGQVHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCVNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|198243986|ref|YP_002218272.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226695124|sp|B5FSA1|RS6_SALDC RecName: Full=30S ribosomal protein S6
gi|197938502|gb|ACH75835.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326626078|gb|EGE32423.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 131
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPCMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|238027016|ref|YP_002911247.1| 30S ribosomal protein S6 [Burkholderia glumae BGR1]
gi|237876210|gb|ACR28543.1| Ribosomal protein S6 [Burkholderia glumae BGR1]
Length = 124
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTITTRGGQIHRVEDWGRRQLAYMIEKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ + ++ VLR L + + E P+ ++ R
Sbjct: 60 VCMNIECDQATLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQR 108
>gi|294788328|ref|ZP_06753571.1| ribosomal protein S6 [Simonsiella muelleri ATCC 29453]
gi|294483759|gb|EFG31443.1| ribosomal protein S6 [Simonsiella muelleri ATCC 29453]
Length = 127
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVNAMVERYKTMITEAGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA + E++ R ++ VLR LT+ S + ++
Sbjct: 60 VLMNIEATPATVDELETAFRFNDAVLRHLTIQTKSAITEASPMMREE 106
>gi|162662263|gb|EDQ49163.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 141
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 22 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHREEDWGRRQLAYMINKLAKAHY 80
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ + +P+ ++ +R++
Sbjct: 81 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKADTAPSSMMKTVEREE 131
>gi|300704318|ref|YP_003745921.1| 30S ribosomal protein S6 [Ralstonia solanacearum CFBP2957]
gi|299071982|emb|CBJ43312.1| 30S ribosomal subunit protein S6 [Ralstonia solanacearum CFBP2957]
Length = 122
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI + E++ + ++ VLR L + E +P+ ++
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKE 105
>gi|304312010|ref|YP_003811608.1| 30S ribosomal protein S6 [gamma proteobacterium HdN1]
gi|301797743|emb|CBL45965.1| 30S ribosomal protein S6 [gamma proteobacterium HdN1]
Length = 141
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+ +I E GG++ + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMVERYKGVITEGGGKIHRFEDWGRRQLAYPIDKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ MN+ A+ E+ R ++ VLR++ + D S + ++ D+ +R R P
Sbjct: 60 ILMNVECSQEALDELGTNFRYNDAVLRNIVIRKDEAVTSESPMLKAGDKPERERRSP 116
>gi|322831169|ref|YP_004211196.1| ribosomal protein S6 [Rahnella sp. Y9602]
gi|321166370|gb|ADW72069.1| ribosomal protein S6 [Rahnella sp. Y9602]
Length = 130
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAAGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + + ++ + +R DR + F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRDRREDFA-E 118
Query: 120 RNVDRKQHVSEE 131
N D + SEE
Sbjct: 119 ANDDAEAGDSEE 130
>gi|85058323|ref|YP_454025.1| 30S ribosomal protein S6 [Sodalis glossinidius str. 'morsitans']
gi|123520151|sp|Q2NW55|RS6_SODGM RecName: Full=30S ribosomal protein S6
gi|84778843|dbj|BAE73620.1| 30S ribosomal protein S6 [Sodalis glossinidius str. 'morsitans']
Length = 131
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S+Q+ I +Y +LI G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFMVHPD-QSEQVAGMIERYSALITGAEGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P I E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEVIDELETVFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRERREDFATE 119
Query: 120 RNVDRKQHVSEE 131
N D SEE
Sbjct: 120 TNEDSDAGDSEE 131
>gi|239995321|ref|ZP_04715845.1| 30S ribosomal protein S6 [Alteromonas macleodii ATCC 27126]
Length = 133
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++++++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQDGGQIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN-DRFPRD 119
V +N + A+ E++ R ++ +LR++ + + P+ ++ R +R D PR
Sbjct: 60 VLINAEASAEAVDELENAFRFNDVILRNMVMRTKTAVTEPSPMMKEEPRRERRDDSAPRQ 119
Query: 120 RNVDRKQHVSEE 131
++K +E+
Sbjct: 120 DRAEKKTETTED 131
>gi|209750014|gb|ACI73314.1| 30S ribosomal subunit protein S6 [Escherichia coli]
Length = 131
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTRHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 120 TADDAEAGDSEE 131
>gi|133976|sp|P02358|RS6_ECOLI RecName: Full=30S ribosomal protein S6; Contains: RecName: Full=30S
ribosomal protein S6, fully modified isoform; Contains:
RecName: Full=30S ribosomal protein S6, non-modified
isoform
gi|33357883|pdb|1P6G|F Chain F, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357960|pdb|1P87|F Chain F, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754044|pdb|2AVY|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|83754100|pdb|2AW7|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
gi|116666553|pdb|1VS5|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116666605|pdb|1VS7|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138058|pdb|2I2P|F Chain F, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138129|pdb|2I2U|F Chain F, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|157836028|pdb|2QOU|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s Ribosome,
With Spectinomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|157836079|pdb|2QOW|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836132|pdb|2QOY|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836183|pdb|2QP0|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429703|pdb|2QAL|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429755|pdb|2QAN|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429813|pdb|2QB9|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429865|pdb|2QBB|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429917|pdb|2QBD|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429969|pdb|2QBF|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430023|pdb|2QBH|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430076|pdb|2QBJ|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431376|pdb|2Z4K|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431429|pdb|2Z4M|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|168988793|pdb|2VHO|F Chain F, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988814|pdb|2VHP|F Chain F, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107283|pdb|3DF1|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|197107335|pdb|3DF3|F Chain F, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|256032368|pdb|3E1A|T Chain T, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032425|pdb|3E1C|T Chain T, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|257097327|pdb|3I1M|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097379|pdb|3I1O|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097431|pdb|3I1Q|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097485|pdb|3I1S|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097539|pdb|3I1Z|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097594|pdb|3I21|F Chain F, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560312|pdb|3KC4|F Chain F, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
gi|308198692|pdb|3OR9|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The First
70s Ribosome.
gi|308198713|pdb|3ORA|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634284|pdb|3IZV|J Chain J, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634309|pdb|3IZW|J Chain J, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|329665997|pdb|3J00|F Chain F, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 135
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVDRKQHVS 129
D + S
Sbjct: 120 TADDAEAGDS 129
>gi|220924505|ref|YP_002499807.1| 30S ribosomal protein S6 [Methylobacterium nodulans ORS 2060]
gi|254765444|sp|B8IED2|RS6_METNO RecName: Full=30S ribosomal protein S6
gi|219949112|gb|ACL59504.1| ribosomal protein S6 [Methylobacterium nodulans ORS 2060]
Length = 134
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/110 (50%), Positives = 83/110 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++SQQ++ I Y+ +I+ NGG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVFLARQDVTSQQVESMIDTYKGVIEANGGKVEKTEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+NI +PPAA+ EM+R+MRI E++LR LT+ V++ E P+ +Q+ DRD
Sbjct: 61 TLLNIDAPPAALAEMERQMRISEDILRFLTIRVEALETEPSAMMQKRDRD 110
>gi|294669618|ref|ZP_06734685.1| hypothetical protein NEIELOOT_01519 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308531|gb|EFE49774.1| hypothetical protein NEIELOOT_01519 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 121
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ EN G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKALVTENNGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA I E++ R ++ VLR LT+ + ++
Sbjct: 60 VLMNIEATPAVIEELETGFRFNDAVLRHLTIQTKHAVTDASPMMKEE 106
>gi|300311390|ref|YP_003775482.1| 30S ribosomal protein S6 [Herbaspirillum seropedicae SmR1]
gi|124483538|emb|CAM32642.1| 30S ribosomal subunit protein S6 [Herbaspirillum seropedicae]
gi|300074175|gb|ADJ63574.1| 30S ribosomal subunit S6 protein [Herbaspirillum seropedicae SmR1]
Length = 121
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ GG+V V + G R +AY+I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR LT+ + E P+ ++ ++D
Sbjct: 60 VCLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKED 110
>gi|83749659|ref|ZP_00946640.1| SSU ribosomal protein S6P [Ralstonia solanacearum UW551]
gi|187928271|ref|YP_001898758.1| 30S ribosomal protein S6 [Ralstonia pickettii 12J]
gi|207723261|ref|YP_002253660.1| 30s ribosomal protein s6 [Ralstonia solanacearum MolK2]
gi|207743344|ref|YP_002259736.1| 30s ribosomal protein s6 [Ralstonia solanacearum IPO1609]
gi|241662844|ref|YP_002981204.1| 30S ribosomal protein S6 [Ralstonia pickettii 12D]
gi|309782230|ref|ZP_07676959.1| ribosomal protein S6 [Ralstonia sp. 5_7_47FAA]
gi|226695118|sp|B2UAG4|RS6_RALPJ RecName: Full=30S ribosomal protein S6
gi|83723661|gb|EAP70858.1| SSU ribosomal protein S6P [Ralstonia solanacearum UW551]
gi|187725161|gb|ACD26326.1| ribosomal protein S6 [Ralstonia pickettii 12J]
gi|206588459|emb|CAQ35422.1| 30s ribosomal protein s6 [Ralstonia solanacearum MolK2]
gi|206594741|emb|CAQ61668.1| 30s ribosomal protein s6 [Ralstonia solanacearum IPO1609]
gi|240864871|gb|ACS62532.1| ribosomal protein S6 [Ralstonia pickettii 12D]
gi|308919001|gb|EFP64669.1| ribosomal protein S6 [Ralstonia sp. 5_7_47FAA]
Length = 122
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+S + GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKSTVTSQGGQVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI + E++ + ++ VLR L + E +P+ ++
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKE 105
>gi|254430019|ref|ZP_05043726.1| ribosomal protein S6 [Alcanivorax sp. DG881]
gi|196196188|gb|EDX91147.1| ribosomal protein S6 [Alcanivorax sp. DG881]
Length = 113
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +++ + G + V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI + E++ R ++ V+R L + D+ P+ + +++
Sbjct: 60 VMLNIECDGETLGELENTFRFNDAVIRHLVIRRDNAVTEPSPLAKHDEKE 109
>gi|260575001|ref|ZP_05843002.1| ribosomal protein S6 [Rhodobacter sp. SW2]
gi|259022623|gb|EEW25918.1| ribosomal protein S6 [Rhodobacter sp. SW2]
Length = 157
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 82/127 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQDISS Q + I + ++I +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDISSTQAESLIEHFSTVIADNGGKVVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
F+ +P AAI EM+R R+ ++V+R LT+ VD+H + P++ +Q+ D DR DR
Sbjct: 61 AFLKTDAPSAAIQEMERLARLHDDVMRVLTIKVDAHVEGPSVQMQKRDERDRGDRPEGGF 120
Query: 121 NVDRKQH 127
+R++
Sbjct: 121 GGERRER 127
>gi|222085436|ref|YP_002543966.1| ribosomal protein S6 [Agrobacterium radiobacter K84]
gi|254765215|sp|B9JCB9|RS6_AGRRK RecName: Full=30S ribosomal protein S6
gi|221722884|gb|ACM26040.1| ribosomal protein S6 [Agrobacterium radiobacter K84]
Length = 150
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/106 (50%), Positives = 81/106 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ+ + QY+ +I+ NGG+V + G++++ YRI+KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEANGGKVGRIENWGLKSLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P AA+HEM+R+MRI E+VLR +T+ V+ HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAAAVHEMERQMRISEDVLRYMTIAVEKHEEGPSAMMQK 106
>gi|332143174|ref|YP_004428912.1| 30S ribosomal protein S6 [Alteromonas macleodii str. 'Deep
ecotype']
gi|226703415|sp|B4S012|RS6_ALTMD RecName: Full=30S ribosomal protein S6
gi|327553196|gb|AEA99914.1| 30S ribosomal protein S6 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 133
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++++++GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQDGGQVHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN-DRFPRD 119
V +N + A+ E++ R ++ +LR++ + + P+ ++ R +R D PR
Sbjct: 60 VLINAEATAEAVDELENAFRFNDVILRNMVMRTKTAVTEPSPMMKEEPRRERRDDSAPRQ 119
Query: 120 RNVDRKQHVSEE 131
++K +E+
Sbjct: 120 ERAEKKTETTED 131
>gi|110835052|ref|YP_693911.1| 30S ribosomal protein S6 [Alcanivorax borkumensis SK2]
gi|123345339|sp|Q0VMF9|RS6_ALCBS RecName: Full=30S ribosomal protein S6
gi|110648163|emb|CAL17639.1| 30S ribosomal protein S6 [Alcanivorax borkumensis SK2]
Length = 113
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +++ + G + V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI + E++ R ++ V+R L + D+ P+ + +++
Sbjct: 60 VMLNIECDGETLGELENTFRFNDAVIRHLVIRRDNAITEPSPLAKHDEKE 109
>gi|94310917|ref|YP_584127.1| 30S ribosomal protein S6 [Cupriavidus metallidurans CH34]
gi|166227371|sp|Q1LLW8|RS6_RALME RecName: Full=30S ribosomal protein S6
gi|93354769|gb|ABF08858.1| 30S ribosomal subunit protein S6 [Cupriavidus metallidurans CH34]
Length = 124
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ L+ G++ V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKQLVTSQNGQIHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCLNIECGKDTLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|163842735|ref|YP_001627139.1| 30S ribosomal protein S6 [Brucella suis ATCC 23445]
gi|189045457|sp|B0CKD9|RS6_BRUSI RecName: Full=30S ribosomal protein S6
gi|163673458|gb|ABY37569.1| ribosomal protein S6 [Brucella suis ATCC 23445]
Length = 148
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 19/144 (13%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH------------- 107
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE+ + + R
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAMLTRRDDRRERDGDDRPR 120
Query: 108 ------DRDDRNDRFPRDRNVDRK 125
DR DR DR PR +
Sbjct: 121 RREGGFDRGDRGDRSPRRPRDNEA 144
>gi|253991545|ref|YP_003042901.1| 30S ribosomal protein S6 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638423|emb|CAR67045.1| 30s ribosomal protein s6 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782995|emb|CAQ86160.1| 30s ribosomal protein s6 [Photorhabdus asymbiotica]
Length = 131
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P A+ E++ R ++ V+RS+ + V + ++ D D D
Sbjct: 60 VLMNVEAPQEAVDELETNFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRSRDYSLEDA 119
Query: 121 NVDRKQ-HVSEE 131
VD ++ SEE
Sbjct: 120 GVDAEEAGDSEE 131
>gi|332995433|gb|AEF05488.1| 30S ribosomal protein S6 [Alteromonas sp. SN2]
Length = 132
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++++N G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTTILKQNDGQIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N + A+ E++ R ++ +LR++ + + P+ + R+ R+D PR
Sbjct: 60 VLINAEATAEAVDELENAFRYNDVILRNMVMRTKNAVTEPSPMTKEERRERRDDSAPRTE 119
Query: 121 NVDRKQHVSEE 131
+R+ +E+
Sbjct: 120 RAERRPESTED 130
>gi|170740808|ref|YP_001769463.1| 30S ribosomal protein S6 [Methylobacterium sp. 4-46]
gi|226703488|sp|B0UL29|RS6_METS4 RecName: Full=30S ribosomal protein S6
gi|168195082|gb|ACA17029.1| ribosomal protein S6 [Methylobacterium sp. 4-46]
Length = 134
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 56/110 (50%), Positives = 83/110 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++SQQ++ I Y+ +I+ NGG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVFLARQDVTSQQVESMIEAYKGVIESNGGKVEKTEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+NI +PPAA+ EM+R+MRI E++LR LT+ VD+ E P+ +Q+ DRD
Sbjct: 61 TLLNIDAPPAALAEMERQMRISEDILRFLTIRVDALEGEPSAMMQKRDRD 110
>gi|255066236|ref|ZP_05318091.1| ribosomal protein S6 [Neisseria sicca ATCC 29256]
gi|255049446|gb|EET44910.1| ribosomal protein S6 [Neisseria sicca ATCC 29256]
Length = 123
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEAGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|260767149|ref|ZP_05876093.1| SSU ribosomal protein S6p [Vibrio furnissii CIP 102972]
gi|260617870|gb|EEX43045.1| SSU ribosomal protein S6p [Vibrio furnissii CIP 102972]
gi|315181339|gb|ADT88253.1| 30S ribosomal protein S6 [Vibrio furnissii NCTC 11218]
Length = 122
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A I E++ R ++ VLR++ + + P++ ++ + + D +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAKEERSKRDEAKFEA 119
Query: 121 NVD 123
+ +
Sbjct: 120 DAE 122
>gi|239831325|ref|ZP_04679654.1| ribosomal protein S6 [Ochrobactrum intermedium LMG 3301]
gi|239823592|gb|EEQ95160.1| ribosomal protein S6 [Ochrobactrum intermedium LMG 3301]
Length = 160
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + QY+ +++ NGG+V V G+R + YRI+KNRKAYY
Sbjct: 13 MALYEHVLLARQDISQQQVDALVEQYKGVLEANGGKVGKVESWGLRPLTYRIKKNRKAYY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ VD HE+ + +
Sbjct: 73 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVDEHEEGQSAML 116
>gi|303257675|ref|ZP_07343687.1| ribosomal protein S6 [Burkholderiales bacterium 1_1_47]
gi|331000771|ref|ZP_08324420.1| ribosomal protein S6 [Parasutterella excrementihominis YIT 11859]
gi|302859645|gb|EFL82724.1| ribosomal protein S6 [Burkholderiales bacterium 1_1_47]
gi|329570503|gb|EGG52228.1| ribosomal protein S6 [Parasutterella excrementihominis YIT 11859]
Length = 138
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ I +Y++ ++ +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEICFIVHPD-QSEQVPAMIERYKAAVESHGGKIHRLEDWGRRQLAYPIEKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI P + E++ R ++ VLR LT+ + E P+ ++ ++
Sbjct: 60 VLMNIECGPEVLEELENNFRYNDAVLRHLTVKMKKAETEPSPMMKAVEK 108
>gi|319407055|emb|CBI80692.1| 30S ribosomal protein S6 [Bartonella sp. 1-1C]
Length = 135
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/110 (48%), Positives = 81/110 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQI + + Y+ +I+ NGG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V +NI +P + I E++R+MRI+E++LR +T+ V+ HE+ + + +RD
Sbjct: 61 VLVNIDAPASTIAELERQMRINEDILRYMTVRVEKHEKEQSTALSSLNRD 110
>gi|187478665|ref|YP_786689.1| 30S ribosomal protein S6 [Bordetella avium 197N]
gi|123514609|sp|Q2KZ18|RS6_BORA1 RecName: Full=30S ribosomal protein S6
gi|115423251|emb|CAJ49784.1| 30S ribosomal protein S6 [Bordetella avium 197N]
Length = 124
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +YQSL+ G V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMVERYQSLVTGQNGAVHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MNI A + E++ R ++ VLR L + ++ ++ +R
Sbjct: 60 VCMNIECNQATLDELEHSFRYNDAVLRHLVIKTKKAPVGASIMMKSVER 108
>gi|121601858|ref|YP_988809.1| 30S ribosomal protein S6 [Bartonella bacilliformis KC583]
gi|166226802|sp|A1US56|RS6_BARBK RecName: Full=30S ribosomal protein S6
gi|120614035|gb|ABM44636.1| ribosomal protein S6 [Bartonella bacilliformis KC583]
Length = 136
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/126 (46%), Positives = 88/126 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ QQ+ + + Y+++I+ +GG+V G+R++AYRIRKNRKA+Y
Sbjct: 1 MALYEHVFLARQDIAPQQVDELLKTYKNVIESHGGKVERTENWGLRSLAYRIRKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P AAI EM+R+MRI+E++LR +T+ V+ HE+ + + R DRDD +
Sbjct: 61 VLINIDAPAAAIAEMERQMRINEDILRYITIRVEKHEKEQSAMLSRPDRDDFPGKDEERP 120
Query: 121 NVDRKQ 126
R+Q
Sbjct: 121 RPSRRQ 126
>gi|332970410|gb|EGK09402.1| 30S ribosomal protein S6 [Kingella kingae ATCC 23330]
Length = 124
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEASGKIHRLEDWGRRQLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA + E++ R ++ VLR LT+ + + ++
Sbjct: 60 VLMNIEATPATVEELETAFRFNDAVLRHLTIQTKAAVTEASPMMREE 106
>gi|329119368|ref|ZP_08248054.1| 30S ribosomal protein S6 [Neisseria bacilliformis ATCC BAA-1200]
gi|327464513|gb|EGF10812.1| 30S ribosomal protein S6 [Neisseria bacilliformis ATCC BAA-1200]
Length = 122
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ EN G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKALVTENNGVIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + PA I E++ R ++ VLR LT+ + ++
Sbjct: 60 VLMNIETTPAVIEELETGFRFNDAVLRHLTIQTKHAVTEASPMMKEE 106
>gi|291614208|ref|YP_003524365.1| ribosomal protein S6 [Sideroxydans lithotrophicus ES-1]
gi|291584320|gb|ADE11978.1| ribosomal protein S6 [Sideroxydans lithotrophicus ES-1]
Length = 128
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y++L+ G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYRTLVTSKNGHIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR LT+ + +P+ ++
Sbjct: 60 VLMNIEVDQPTLDELEHAFKFNDAVLRHLTIKTKAAVVTPSAMMKEE 106
>gi|54778759|gb|AAV39593.1| ribosomal protein S6 [synthetic construct]
Length = 158
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+YV
Sbjct: 26 RHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV 84
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRDR 120
MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 85 LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET 144
Query: 121 NVDRKQHVSEE 131
D + SEE
Sbjct: 145 ADDAEAGDSEE 155
>gi|59801012|ref|YP_207724.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA 1090]
gi|239999183|ref|ZP_04719107.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|240016351|ref|ZP_04722891.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA6140]
gi|240115918|ref|ZP_04729980.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|240118216|ref|ZP_04732278.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|240123764|ref|ZP_04736720.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|240125955|ref|ZP_04738841.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|254493954|ref|ZP_05107125.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 1291]
gi|260440267|ref|ZP_05794083.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
gi|268595013|ref|ZP_06129180.1| ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|268601588|ref|ZP_06135755.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|268603927|ref|ZP_06138094.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|268682390|ref|ZP_06149252.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|268684548|ref|ZP_06151410.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|291043561|ref|ZP_06569277.1| ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
gi|3122818|sp|O07813|RS6_NEIGO RecName: Full=30S ribosomal protein S6
gi|75432531|sp|Q5F925|RS6_NEIG1 RecName: Full=30S ribosomal protein S6
gi|2196757|gb|AAB61228.1| ribosomal protein S6 [Neisseria gonorrhoeae]
gi|59717907|gb|AAW89312.1| putative 30S ribosomal protein S6 [Neisseria gonorrhoeae FA 1090]
gi|226512994|gb|EEH62339.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae 1291]
gi|268548402|gb|EEZ43820.1| ribosomal protein S6 [Neisseria gonorrhoeae 35/02]
gi|268585719|gb|EEZ50395.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18]
gi|268588058|gb|EEZ52734.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1]
gi|268622674|gb|EEZ55074.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332]
gi|268624832|gb|EEZ57232.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679]
gi|291012024|gb|EFE04013.1| ribosomal protein S6 [Neisseria gonorrhoeae DGI2]
Length = 122
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|306845084|ref|ZP_07477664.1| ribosomal protein S6 [Brucella sp. BO1]
gi|306274499|gb|EFM56294.1| ribosomal protein S6 [Brucella sp. BO1]
Length = 148
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 52/104 (50%), Positives = 74/104 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ VD HE+ + +
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVDEHEEGQSAML 104
>gi|326389002|ref|ZP_08210584.1| ribosomal protein S6 [Novosphingobium nitrogenifigens DSM 19370]
gi|326206602|gb|EGD57437.1| ribosomal protein S6 [Novosphingobium nitrogenifigens DSM 19370]
Length = 120
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G+R++AY+I+KNRKA++
Sbjct: 1 MPLYEHVFLARQDLSQSQVDALAATATEIVEANQGKVTKTETWGLRSLAYKIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI +P + E++R+ I+E+++R LT+ VD E P++ ++++D
Sbjct: 61 VLLNIEAPAGVVAELERQTSINEDIIRFLTVRVDELETGPSVMMRKND 108
>gi|149203936|ref|ZP_01880904.1| ribosomal protein S6 [Roseovarius sp. TM1035]
gi|149142378|gb|EDM30423.1| ribosomal protein S6 [Roseovarius sp. TM1035]
Length = 141
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+SS Q + I + +++ ENGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSSAQAEGLIEHFGAVLTENGGTLVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
F+ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q+ RD+R DR R
Sbjct: 61 AFLKSDAPSSAVQEMERLMRLHDDVMRVLTVKVDAHEEGPSVQMQK--RDERGDRPDRGD 118
Query: 121 NVDRKQH 127
DR
Sbjct: 119 RPDRGDR 125
>gi|261379684|ref|ZP_05984257.1| ribosomal protein S6 [Neisseria subflava NJ9703]
gi|284797346|gb|EFC52693.1| ribosomal protein S6 [Neisseria subflava NJ9703]
Length = 123
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|121607969|ref|YP_995776.1| 30S ribosomal protein S6 [Verminephrobacter eiseniae EF01-2]
gi|166227400|sp|A1WGK1|RS6_VEREI RecName: Full=30S ribosomal protein S6
gi|121552609|gb|ABM56758.1| SSU ribosomal protein S6P [Verminephrobacter eiseniae EF01-2]
Length = 141
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHRVEDWGRRQLAYLINKLSKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ P+ ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVHKKKAVTGPSAMMKTVEREE 110
>gi|261379071|ref|ZP_05983644.1| ribosomal protein S6 [Neisseria cinerea ATCC 14685]
gi|269144450|gb|EEZ70868.1| ribosomal protein S6 [Neisseria cinerea ATCC 14685]
Length = 122
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|262148953|ref|ZP_06028101.1| SSU ribosomal protein S6p [Vibrio cholerae INDRE 91/1]
gi|262031264|gb|EEY49880.1| SSU ribosomal protein S6p [Vibrio cholerae INDRE 91/1]
Length = 102
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MN+ + A + E++ R ++ VLR++ + + P+
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPS 100
>gi|227112368|ref|ZP_03826024.1| 30S ribosomal protein S6 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227325960|ref|ZP_03829984.1| 30S ribosomal protein S6 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253689797|ref|YP_003018987.1| ribosomal protein S6 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261822829|ref|YP_003260935.1| 30S ribosomal protein S6 [Pectobacterium wasabiae WPP163]
gi|259495340|sp|C6DE15|RS6_PECCP RecName: Full=30S ribosomal protein S6
gi|251756375|gb|ACT14451.1| ribosomal protein S6 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261606842|gb|ACX89328.1| ribosomal protein S6 [Pectobacterium wasabiae WPP163]
Length = 130
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTATITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFA-E 118
Query: 120 RNVDRKQHVSEE 131
D SEE
Sbjct: 119 AGDDVDAGDSEE 130
>gi|258622407|ref|ZP_05717430.1| 30S ribosomal protein S6 [Vibrio mimicus VM573]
gi|258625992|ref|ZP_05720857.1| 30S ribosomal protein S6 [Vibrio mimicus VM603]
gi|261210397|ref|ZP_05924691.1| SSU ribosomal protein S6p [Vibrio sp. RC341]
gi|262163854|ref|ZP_06031594.1| SSU ribosomal protein S6p [Vibrio mimicus VM223]
gi|262172537|ref|ZP_06040215.1| SSU ribosomal protein S6p [Vibrio mimicus MB-451]
gi|262401543|ref|ZP_06078110.1| SSU ribosomal protein S6p [Vibrio sp. RC586]
gi|258581740|gb|EEW06624.1| 30S ribosomal protein S6 [Vibrio mimicus VM603]
gi|258585321|gb|EEW10047.1| 30S ribosomal protein S6 [Vibrio mimicus VM573]
gi|260840455|gb|EEX67021.1| SSU ribosomal protein S6p [Vibrio sp. RC341]
gi|261893613|gb|EEY39599.1| SSU ribosomal protein S6p [Vibrio mimicus MB-451]
gi|262027834|gb|EEY46499.1| SSU ribosomal protein S6p [Vibrio mimicus VM223]
gi|262352258|gb|EEZ01387.1| SSU ribosomal protein S6p [Vibrio sp. RC586]
Length = 122
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A + E++ R ++ VLR++ + + P++ ++ + + D D
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEVKFDA 119
Query: 121 NVD 123
+V+
Sbjct: 120 DVE 122
>gi|298368601|ref|ZP_06979919.1| ribosomal protein S6 [Neisseria sp. oral taxon 014 str. F0314]
gi|298282604|gb|EFI24091.1| ribosomal protein S6 [Neisseria sp. oral taxon 014 str. F0314]
Length = 125
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|296314490|ref|ZP_06864431.1| ribosomal protein S6 [Neisseria polysaccharea ATCC 43768]
gi|296838792|gb|EFH22730.1| ribosomal protein S6 [Neisseria polysaccharea ATCC 43768]
Length = 122
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|50122534|ref|YP_051701.1| 30S ribosomal protein S6 [Pectobacterium atrosepticum SCRI1043]
gi|61215523|sp|Q6D135|RS6_ERWCT RecName: Full=30S ribosomal protein S6
gi|49613060|emb|CAG76511.1| 30S ribosomal protein S6 [Pectobacterium atrosepticum SCRI1043]
Length = 130
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTATITGAQGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + V + ++ + +R +R + F +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERREDFA-E 118
Query: 120 RNVDRKQHVSEE 131
D + SEE
Sbjct: 119 AGDDVEAGDSEE 130
>gi|240080470|ref|ZP_04725013.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA19]
gi|268596607|ref|ZP_06130774.1| ribosomal protein S6 [Neisseria gonorrhoeae FA19]
gi|268550395|gb|EEZ45414.1| ribosomal protein S6 [Neisseria gonorrhoeae FA19]
Length = 122
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|15640393|ref|NP_230020.1| 30S ribosomal protein S6 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590972|ref|ZP_01678292.1| ribosomal protein S6 [Vibrio cholerae 2740-80]
gi|121730195|ref|ZP_01682585.1| ribosomal protein S6 [Vibrio cholerae V52]
gi|147675449|ref|YP_001218635.1| 30S ribosomal protein S6 [Vibrio cholerae O395]
gi|153216649|ref|ZP_01950556.1| ribosomal protein S6 [Vibrio cholerae 1587]
gi|153820255|ref|ZP_01972922.1| ribosomal protein S6 [Vibrio cholerae NCTC 8457]
gi|153827636|ref|ZP_01980303.1| ribosomal protein S6 [Vibrio cholerae MZO-2]
gi|153830466|ref|ZP_01983133.1| ribosomal protein S6 [Vibrio cholerae 623-39]
gi|227080578|ref|YP_002809129.1| ribosomal protein S6 [Vibrio cholerae M66-2]
gi|229504949|ref|ZP_04394460.1| SSU ribosomal protein S6p [Vibrio cholerae BX 330286]
gi|229508613|ref|ZP_04398109.1| SSU ribosomal protein S6p [Vibrio cholerae B33]
gi|229512614|ref|ZP_04402084.1| SSU ribosomal protein S6p [Vibrio cholerae TMA 21]
gi|229516025|ref|ZP_04405476.1| SSU ribosomal protein S6p [Vibrio cholerae RC9]
gi|229519927|ref|ZP_04409358.1| SSU ribosomal protein S6p [Vibrio cholerae TM 11079-80]
gi|229525060|ref|ZP_04414465.1| SSU ribosomal protein S6p [Vibrio cholerae bv. albensis VL426]
gi|229526941|ref|ZP_04416338.1| SSU ribosomal protein S6p [Vibrio cholerae 12129(1)]
gi|229606353|ref|YP_002877001.1| 30S ribosomal protein S6 [Vibrio cholerae MJ-1236]
gi|254286210|ref|ZP_04961169.1| ribosomal protein S6 [Vibrio cholerae AM-19226]
gi|254851677|ref|ZP_05241027.1| 30S ribosomal protein S6 [Vibrio cholerae MO10]
gi|255747164|ref|ZP_05421107.1| SSU ribosomal protein S6p [Vibrio cholera CIRS 101]
gi|262166876|ref|ZP_06034598.1| SSU ribosomal protein S6p [Vibrio cholerae RC27]
gi|297582250|ref|ZP_06944165.1| ribosomal protein S6 [Vibrio cholerae RC385]
gi|298501263|ref|ZP_07011061.1| ribosomal protein S6 [Vibrio cholerae MAK 757]
gi|13959535|sp|Q9KUZ2|RS6_VIBCH RecName: Full=30S ribosomal protein S6
gi|189045594|sp|A5F3K3|RS6_VIBC3 RecName: Full=30S ribosomal protein S6
gi|254765463|sp|C3LR98|RS6_VIBCM RecName: Full=30S ribosomal protein S6
gi|9654783|gb|AAF93539.1| ribosomal protein S6 [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547198|gb|EAX57325.1| ribosomal protein S6 [Vibrio cholerae 2740-80]
gi|121628053|gb|EAX60598.1| ribosomal protein S6 [Vibrio cholerae V52]
gi|124114160|gb|EAY32980.1| ribosomal protein S6 [Vibrio cholerae 1587]
gi|126509206|gb|EAZ71800.1| ribosomal protein S6 [Vibrio cholerae NCTC 8457]
gi|146317332|gb|ABQ21871.1| ribosomal protein S6 [Vibrio cholerae O395]
gi|148874068|gb|EDL72203.1| ribosomal protein S6 [Vibrio cholerae 623-39]
gi|149737886|gb|EDM52791.1| ribosomal protein S6 [Vibrio cholerae MZO-2]
gi|150423625|gb|EDN15567.1| ribosomal protein S6 [Vibrio cholerae AM-19226]
gi|227008466|gb|ACP04678.1| ribosomal protein S6 [Vibrio cholerae M66-2]
gi|227012222|gb|ACP08432.1| ribosomal protein S6 [Vibrio cholerae O395]
gi|229335553|gb|EEO01033.1| SSU ribosomal protein S6p [Vibrio cholerae 12129(1)]
gi|229338641|gb|EEO03658.1| SSU ribosomal protein S6p [Vibrio cholerae bv. albensis VL426]
gi|229343055|gb|EEO08042.1| SSU ribosomal protein S6p [Vibrio cholerae TM 11079-80]
gi|229346928|gb|EEO11895.1| SSU ribosomal protein S6p [Vibrio cholerae RC9]
gi|229350396|gb|EEO15346.1| SSU ribosomal protein S6p [Vibrio cholerae TMA 21]
gi|229354381|gb|EEO19308.1| SSU ribosomal protein S6p [Vibrio cholerae B33]
gi|229358007|gb|EEO22923.1| SSU ribosomal protein S6p [Vibrio cholerae BX 330286]
gi|229369008|gb|ACQ59431.1| SSU ribosomal protein S6p [Vibrio cholerae MJ-1236]
gi|254847382|gb|EET25796.1| 30S ribosomal protein S6 [Vibrio cholerae MO10]
gi|255735213|gb|EET90615.1| SSU ribosomal protein S6p [Vibrio cholera CIRS 101]
gi|262024706|gb|EEY43385.1| SSU ribosomal protein S6p [Vibrio cholerae RC27]
gi|297533508|gb|EFH72354.1| ribosomal protein S6 [Vibrio cholerae RC385]
gi|297540017|gb|EFH76080.1| ribosomal protein S6 [Vibrio cholerae MAK 757]
Length = 122
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A + E++ R ++ VLR++ + + P++ ++ + + D D
Sbjct: 60 VLMNVEADQAVVDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDA 119
Query: 121 NVD 123
+V+
Sbjct: 120 DVE 122
>gi|302879169|ref|YP_003847733.1| 30S ribosomal protein S6 [Gallionella capsiferriformans ES-2]
gi|302581958|gb|ADL55969.1| ribosomal protein S6 [Gallionella capsiferriformans ES-2]
Length = 126
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++L+ GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRTLVTAKGGQIHRLEDWGRRQLAYAIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E++ R ++ VLR LT+ + P+ ++ ++++ +
Sbjct: 60 VLMNIECNQEILDELEHAFRFNDAVLRHLTVKTKAAVTVPSAMMK----EEKSRSVLSEE 115
Query: 121 NVDRKQHVSE 130
V K+ E
Sbjct: 116 VVQAKEESVE 125
>gi|294634470|ref|ZP_06713005.1| ribosomal protein S6 [Edwardsiella tarda ATCC 23685]
gi|291091984|gb|EFE24545.1| ribosomal protein S6 [Edwardsiella tarda ATCC 23685]
Length = 131
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R + F +
Sbjct: 60 VLMNVEAPQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ + + SEE
Sbjct: 120 TSEETEAGDSEE 131
>gi|329913489|ref|ZP_08275958.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480]
gi|327545347|gb|EGF30582.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480]
Length = 122
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ + G V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKAVVAAHSGVVHRVEDWGRRQMAYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V MNI + E++ + ++ VLR LT+ + E +P+ ++ ++D +
Sbjct: 60 VCMNIECDNETLVEIETGFKFNDAVLRHLTVKLKKAETAPSPMMKAVQKEDAAKSHRSE 118
>gi|149184752|ref|ZP_01863070.1| ribosomal protein S6 [Erythrobacter sp. SD-21]
gi|148832072|gb|EDL50505.1| ribosomal protein S6 [Erythrobacter sp. SD-21]
Length = 121
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 80/121 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G++ +AY+I +NRKA++
Sbjct: 1 MALYEHVFLARQDLSQAQVDQLAATATEIVEANDGKVTKTETWGLKNLAYKIDRNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P A + E++R+ RI+E+V+R +T+ VD HE+ P++ +++++RD + + +R
Sbjct: 61 VMLNIEGPGAVVAELERQTRINEDVIRYMTIRVDEHEEGPSVMMRKNERDSKKRKDREER 120
Query: 121 N 121
N
Sbjct: 121 N 121
>gi|37528392|ref|NP_931737.1| 30S ribosomal protein S6 [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|61216269|sp|Q7MYU7|RS6_PHOLL RecName: Full=30S ribosomal protein S6
gi|36787830|emb|CAE16945.1| 30S ribosomal protein S6 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 131
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ V+RS+ + V + ++ D D D
Sbjct: 60 VLMNVEAPQEVIDELETNFRFNDAVIRSMIMRVKHAVTEASPMVKAKDERRSRDYSLEDA 119
Query: 121 NVDRKQ-HVSEE 131
N+D ++ SEE
Sbjct: 120 NMDAEEAGDSEE 131
>gi|242238246|ref|YP_002986427.1| 30S ribosomal protein S6 [Dickeya dadantii Ech703]
gi|242130303|gb|ACS84605.1| ribosomal protein S6 [Dickeya dadantii Ech703]
Length = 130
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P I E++ R ++ V+RS+ + V + ++ D +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDEYAEA 119
Query: 121 NVDRKQHVSEE 131
D + SEE
Sbjct: 120 GDDAEAGDSEE 130
>gi|27364781|ref|NP_760309.1| 30S ribosomal protein S6 [Vibrio vulnificus CMCP6]
gi|161486597|ref|NP_935777.2| 30S ribosomal protein S6 [Vibrio vulnificus YJ016]
gi|320155175|ref|YP_004187554.1| 30S ribosomal protein S6p [Vibrio vulnificus MO6-24/O]
gi|31340389|sp|Q8DCL6|RS6_VIBVU RecName: Full=30S ribosomal protein S6
gi|61216263|sp|Q7MH88|RS6_VIBVY RecName: Full=30S ribosomal protein S6
gi|27360926|gb|AAO09836.1| ribosomal protein S6 [Vibrio vulnificus CMCP6]
gi|319930487|gb|ADV85351.1| SSU ribosomal protein S6p [Vibrio vulnificus MO6-24/O]
Length = 123
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
V MN+ + A I E++ R ++ VLR++ + + P++ ++ +++R R
Sbjct: 60 VLMNVEADQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSIMLK--QKEERAPRR 113
>gi|149926826|ref|ZP_01915085.1| 30S ribosomal protein S6 [Limnobacter sp. MED105]
gi|149824378|gb|EDM83596.1| 30S ribosomal protein S6 [Limnobacter sp. MED105]
Length = 134
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D S+Q+ + +Y+ I+ NGG+V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIAFIVHPD-QSEQVPAMVEKYRGTIEANGGKVHRHEDWGRRQLAYPIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V +NI + E++ + ++ VLR LT+ + E +P+ ++ R+
Sbjct: 60 VLLNIECSQEVLEELETAFKFNDAVLRHLTVKMKKAETAPSPMMKEVQREQER 112
>gi|113868255|ref|YP_726744.1| 30S ribosomal protein S6 [Ralstonia eutropha H16]
gi|194289923|ref|YP_002005830.1| 30S ribosomal protein s6 [Cupriavidus taiwanensis LMG 19424]
gi|123032891|sp|Q0K9E5|RS6_RALEH RecName: Full=30S ribosomal protein S6
gi|226703447|sp|B3R2P7|RS6_CUPTR RecName: Full=30S ribosomal protein S6
gi|113527031|emb|CAJ93376.1| SSU ribosomal protein S6 [Ralstonia eutropha H16]
gi|193223758|emb|CAQ69765.1| 30S ribosomal subunit protein S6 [Cupriavidus taiwanensis LMG
19424]
Length = 124
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ L+ G V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKQLVTSQNGNVHRVEDWGRRQMAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + E++ + ++ VLR L + E +P+ ++ R++
Sbjct: 60 VCLNIECGKETLAELEHAFKFNDAVLRHLIVQTKKAETAPSPMMKEVQREE 110
>gi|120555298|ref|YP_959649.1| 30S ribosomal protein S6 [Marinobacter aquaeolei VT8]
gi|166226978|sp|A1U393|RS6_MARAV RecName: Full=30S ribosomal protein S6
gi|120325147|gb|ABM19462.1| SSU ribosomal protein S6P [Marinobacter aquaeolei VT8]
Length = 137
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y S+I E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTSVITEDGGKVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI AA+ E+ R ++ ++R L L D + R+DR R D
Sbjct: 60 VLMNIECSQAAMDELTHNFRFNDAIIRDLILRRDEAVTDLSPMKAAESREDR--RSGGDD 117
Query: 121 NVDRKQHVSEEKPLS 135
R E + S
Sbjct: 118 RPRRSADSEERQSAS 132
>gi|118594782|ref|ZP_01552129.1| 30S ribosomal protein S6 [Methylophilales bacterium HTCC2181]
gi|118440560|gb|EAV47187.1| 30S ribosomal protein S6 [Methylophilales bacterium HTCC2181]
Length = 141
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I + Q+LI+ N G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFVVHPD-QSEQVPAMIDRLQTLIKTNKGKIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E++ + ++ V+R L +P+ ++ P++
Sbjct: 60 VLMNIECSLETLAELEHSFKFNDAVIRHLVFATKLAVTNPSAMMKEEKSKSLVGDKPKEE 119
Query: 121 NVDRKQHVSEEK 132
+ + V+E K
Sbjct: 120 APVKAEAVTETK 131
>gi|254467837|ref|ZP_05081243.1| ribosomal protein S6 [beta proteobacterium KB13]
gi|207086647|gb|EDZ63930.1| ribosomal protein S6 [beta proteobacterium KB13]
Length = 128
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +YQ+L++ N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFIVHPD-QSEQVPAMIERYQTLLKTNSGNIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR LT + +P+ ++
Sbjct: 60 VLMNIECDQKTLEELETSFKFNDAVLRHLTFATKNAVTAPSPMMKEE 106
>gi|163759111|ref|ZP_02166197.1| 30S ribosomal protein S6 [Hoeflea phototrophica DFL-43]
gi|162283515|gb|EDQ33800.1| 30S ribosomal protein S6 [Hoeflea phototrophica DFL-43]
Length = 139
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+SSQQ++ + QY+ +I+ GG+V + G++++ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDVSSQQVEALVEQYKGVIEGLGGKVGRIEHWGLKSLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
M+I +P A+ EM+R+MR +E++LR +T+ VD+HE+ P+ +Q+
Sbjct: 61 ALMDIDAPAPAVKEMERQMRFNEDILRFMTVSVDAHEEGPSAMLQK 106
>gi|241760375|ref|ZP_04758470.1| ribosomal protein S6 [Neisseria flavescens SK114]
gi|319637635|ref|ZP_07992401.1| 30S ribosomal protein S6 [Neisseria mucosa C102]
gi|241319253|gb|EER55731.1| ribosomal protein S6 [Neisseria flavescens SK114]
gi|317400790|gb|EFV81445.1| 30S ribosomal protein S6 [Neisseria mucosa C102]
Length = 123
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|156972403|ref|YP_001443310.1| 30S ribosomal protein S6 [Vibrio harveyi ATCC BAA-1116]
gi|269961472|ref|ZP_06175836.1| 30S ribosomal protein S6 [Vibrio harveyi 1DA3]
gi|166227402|sp|A7MSX8|RS6_VIBHB RecName: Full=30S ribosomal protein S6
gi|156523997|gb|ABU69083.1| hypothetical protein VIBHAR_00023 [Vibrio harveyi ATCC BAA-1116]
gi|269833849|gb|EEZ87944.1| 30S ribosomal protein S6 [Vibrio harveyi 1DA3]
Length = 129
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V MN+ + I E++ R ++ VLR++ + + ++ ++ +++R +R PR
Sbjct: 60 VLMNVEAGQEVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLK--QKEERAERAPRR 116
>gi|290473409|ref|YP_003466275.1| 30S ribosomal subunit protein S6 [Xenorhabdus bovienii SS-2004]
gi|289172708|emb|CBJ79479.1| 30S ribosomal subunit protein S6 [Xenorhabdus bovienii SS-2004]
Length = 132
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + V P+ ++ D D +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEPSPMVKAKDERRSRDLVLEED 119
Query: 121 NVD--RKQHVSEE 131
D + SEE
Sbjct: 120 MADDADEAGDSEE 132
>gi|37199919|dbj|BAC95748.1| ribosomal protein S6 [Vibrio vulnificus YJ016]
Length = 134
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 12 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 70
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
V MN+ + A I E++ R ++ VLR++ + + P++ ++ +++R R
Sbjct: 71 VLMNVEADQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSIMLK--QKEERAPRR 124
>gi|332527889|ref|ZP_08403926.1| 30S ribosomal protein S6 [Rubrivivax benzoatilyticus JA2]
gi|332112466|gb|EGJ12259.1| 30S ribosomal protein S6 [Rubrivivax benzoatilyticus JA2]
Length = 121
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y++L+ GG+V V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKTLVTAGGGKVHRVEDWGRRQLAYMIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +NI + E++ R ++ VLR LT+ + E +P++ ++ +R++ ++
Sbjct: 60 LCLNIECDKPVLEELETGFRFNDAVLRHLTVRKEKAETTPSVMMKAVEREESRKASQQEA 119
Query: 121 NV 122
+
Sbjct: 120 SA 121
>gi|90414464|ref|ZP_01222440.1| 30S ribosomal protein S6 [Photobacterium profundum 3TCK]
gi|90324469|gb|EAS41028.1| 30S ribosomal protein S6 [Photobacterium profundum 3TCK]
Length = 141
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-----RDDRNDR 115
V MNI + + + E++ R ++ V+R++ + + P+ ++ + RDDR +R
Sbjct: 60 VLMNIEAEQSVVDELETTFRFNDAVIRNMIMRAKNAVTEPSPMMKAKEERFTKRDDREER 119
Query: 116 FPRDRNV 122
R
Sbjct: 120 SDRSEAP 126
>gi|254500250|ref|ZP_05112401.1| ribosomal protein S6, putative [Labrenzia alexandrii DFL-11]
gi|222436321|gb|EEE43000.1| ribosomal protein S6, putative [Labrenzia alexandrii DFL-11]
Length = 154
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S+QQ++ + QY+ LI+ GG + V G+RT+AYRI+KNRKA+Y
Sbjct: 1 MPLYEHIFLARQDVSAQQVETLVEQYKGLIEGAGGTIGKVENWGLRTLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E+VLR +T VD ++ P+ +Q+
Sbjct: 61 TLMNITAPHAAVAEMERQMGLSEDVLRFMTFKVDELDEEPSAMMQK 106
>gi|28899514|ref|NP_799119.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus RIMD 2210633]
gi|91227277|ref|ZP_01261702.1| 30S ribosomal protein S6 [Vibrio alginolyticus 12G01]
gi|260366345|ref|ZP_05778791.1| ribosomal protein S6 [Vibrio parahaemolyticus K5030]
gi|260879408|ref|ZP_05891763.1| ribosomal protein S6 [Vibrio parahaemolyticus AN-5034]
gi|260896873|ref|ZP_05905369.1| ribosomal protein S6 [Vibrio parahaemolyticus Peru-466]
gi|260902021|ref|ZP_05910416.1| ribosomal protein S6 [Vibrio parahaemolyticus AQ4037]
gi|262393105|ref|YP_003284959.1| 30S ribosomal protein S6p [Vibrio sp. Ex25]
gi|269964442|ref|ZP_06178683.1| 30S ribosomal protein S6 [Vibrio alginolyticus 40B]
gi|31340374|sp|Q87L72|RS6_VIBPA RecName: Full=30S ribosomal protein S6
gi|28807750|dbj|BAC61003.1| ribosomal protein S6 [Vibrio parahaemolyticus RIMD 2210633]
gi|91188671|gb|EAS74960.1| 30S ribosomal protein S6 [Vibrio alginolyticus 12G01]
gi|262336699|gb|ACY50494.1| SSU ribosomal protein S6p [Vibrio sp. Ex25]
gi|269830780|gb|EEZ84998.1| 30S ribosomal protein S6 [Vibrio alginolyticus 40B]
gi|308086291|gb|EFO35986.1| ribosomal protein S6 [Vibrio parahaemolyticus Peru-466]
gi|308089677|gb|EFO39372.1| ribosomal protein S6 [Vibrio parahaemolyticus AN-5034]
gi|308109423|gb|EFO46963.1| ribosomal protein S6 [Vibrio parahaemolyticus AQ4037]
gi|308112696|gb|EFO50236.1| ribosomal protein S6 [Vibrio parahaemolyticus K5030]
gi|328472353|gb|EGF43223.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus 10329]
Length = 129
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A I E++ R ++ VLR++ + + ++ +++ + +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQKEERAPRREERSEA 119
Query: 121 NVDRKQHVSE 130
+ K +E
Sbjct: 120 KPEAKSEAAE 129
>gi|83311202|ref|YP_421466.1| 30S ribosomal protein S6 [Magnetospirillum magneticum AMB-1]
gi|123542046|sp|Q2W5G8|RS6_MAGMM RecName: Full=30S ribosomal protein S6
gi|82946043|dbj|BAE50907.1| Ribosomal protein S6 [Magnetospirillum magneticum AMB-1]
Length = 144
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/117 (45%), Positives = 78/117 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE VF+ RQDIS+ Q++ + ++I + GG V G+R IAYR++KNRK +Y
Sbjct: 1 MSLYECVFIARQDISTPQVETLTEELSNIITQGGGSVSKKEYWGLRNIAYRVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
V +NI +P AA+ EM+R+M I+E+VLR+LT+ V+ E+ P+ +Q RDDR R
Sbjct: 61 VLLNIDAPSAAVKEMERQMSINEDVLRTLTIRVEELEEGPSAMMQSKSRDDRPRRGE 117
>gi|261401265|ref|ZP_05987390.1| ribosomal protein S6 [Neisseria lactamica ATCC 23970]
gi|269208748|gb|EEZ75203.1| ribosomal protein S6 [Neisseria lactamica ATCC 23970]
gi|325136174|gb|EGC58782.1| ribosomal protein S6 [Neisseria meningitidis M0579]
gi|325201967|gb|ADY97421.1| ribosomal protein S6 [Neisseria meningitidis M01-240149]
gi|325208282|gb|ADZ03734.1| ribosomal protein S6 [Neisseria meningitidis NZ-05/33]
Length = 122
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|239814824|ref|YP_002943734.1| 30S ribosomal protein S6 [Variovorax paradoxus S110]
gi|259495368|sp|C5CUP0|RS6_VARPS RecName: Full=30S ribosomal protein S6
gi|239801401|gb|ACS18468.1| ribosomal protein S6 [Variovorax paradoxus S110]
Length = 124
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ LI GG+V V + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGLITAGGGKVHRVEDWGRRQLAYQINKLSKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEAEQTVMGELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|297538626|ref|YP_003674395.1| 30S ribosomal protein S6 [Methylotenera sp. 301]
gi|297257973|gb|ADI29818.1| ribosomal protein S6 [Methylotenera sp. 301]
Length = 132
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++LI +GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYELVFIVHPD-QSEQVPAMIERYRTLITASGGAVHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR L + + +P+ ++
Sbjct: 60 VLMNIECNLEVLAELEHGFKFNDAVLRHLLMSKKTAVTAPSPMMKEE 106
>gi|121635034|ref|YP_975279.1| 30S ribosomal protein S6 [Neisseria meningitidis FAM18]
gi|161870198|ref|YP_001599368.1| 30S ribosomal protein S6 [Neisseria meningitidis 053442]
gi|218768343|ref|YP_002342855.1| 30S ribosomal protein S6 [Neisseria meningitidis Z2491]
gi|254805122|ref|YP_003083343.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha14]
gi|304387366|ref|ZP_07369558.1| 30S ribosomal protein S6 [Neisseria meningitidis ATCC 13091]
gi|13959509|sp|Q9JU24|RS6_NEIMA RecName: Full=30S ribosomal protein S6
gi|166227354|sp|A1KUF0|RS6_NEIMF RecName: Full=30S ribosomal protein S6
gi|189045476|sp|A9LZQ3|RS6_NEIM0 RecName: Full=30S ribosomal protein S6
gi|120866740|emb|CAM10493.1| 30S ribosomal protein S6 [Neisseria meningitidis FAM18]
gi|121052351|emb|CAM08683.1| 30S ribosomal protein S6 [Neisseria meningitidis Z2491]
gi|161595751|gb|ABX73411.1| 30S ribosomal protein S6 [Neisseria meningitidis 053442]
gi|254668664|emb|CBA06348.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha14]
gi|254671746|emb|CBA09568.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha153]
gi|261392397|emb|CAX49939.1| 30S ribosomal protein S6 [Neisseria meningitidis 8013]
gi|304338617|gb|EFM04735.1| 30S ribosomal protein S6 [Neisseria meningitidis ATCC 13091]
gi|308389441|gb|ADO31761.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha710]
gi|316984125|gb|EFV63103.1| ribosomal protein S6 [Neisseria meningitidis H44/76]
gi|319410589|emb|CBY90958.1| 30S ribosomal protein S6 [Neisseria meningitidis WUE 2594]
gi|325128380|gb|EGC51263.1| ribosomal protein S6 [Neisseria meningitidis N1568]
gi|325134437|gb|EGC57082.1| ribosomal protein S6 [Neisseria meningitidis M13399]
gi|325138251|gb|EGC60820.1| ribosomal protein S6 [Neisseria meningitidis ES14902]
gi|325140453|gb|EGC62974.1| ribosomal protein S6 [Neisseria meningitidis CU385]
gi|325205905|gb|ADZ01358.1| ribosomal protein S6 [Neisseria meningitidis M04-240196]
Length = 122
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|240013909|ref|ZP_04720822.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae DGI18]
gi|240113162|ref|ZP_04727652.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|240121478|ref|ZP_04734440.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID24-1]
gi|240128467|ref|ZP_04741128.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|268599241|ref|ZP_06133408.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|268686858|ref|ZP_06153720.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|293398875|ref|ZP_06643040.1| small subunit ribosomal protein S6 [Neisseria gonorrhoeae F62]
gi|268583372|gb|EEZ48048.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae MS11]
gi|268627142|gb|EEZ59542.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-93-1035]
gi|291610289|gb|EFF39399.1| small subunit ribosomal protein S6 [Neisseria gonorrhoeae F62]
Length = 122
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|149191591|ref|ZP_01869836.1| 30S ribosomal protein S6 [Vibrio shilonii AK1]
gi|148834549|gb|EDL51541.1| 30S ribosomal protein S6 [Vibrio shilonii AK1]
Length = 126
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEANGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P AI E++ R ++ VLR++ + + P++ +++ + +
Sbjct: 60 VLMNVEAPQEAIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKQKEERAPRREERTEA 119
Query: 121 NVDRKQH 127
+
Sbjct: 120 KPEAAAE 126
>gi|307132414|ref|YP_003884430.1| 30S ribosomal subunit protein S6 [Dickeya dadantii 3937]
gi|306529943|gb|ADM99873.1| 30S ribosomal subunit protein S6 [Dickeya dadantii 3937]
Length = 130
Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ V+RS+ + V + ++ D +
Sbjct: 60 VLMNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDEYAEA 119
Query: 121 NVDRKQHVSEE 131
+ D + SEE
Sbjct: 120 DDDAEVGDSEE 130
>gi|313668460|ref|YP_004048744.1| 30S ribosomal protein S6 [Neisseria lactamica ST-640]
gi|309379252|emb|CBX22209.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005922|emb|CBN87379.1| 30S ribosomal protein S6 [Neisseria lactamica 020-06]
Length = 122
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|319792757|ref|YP_004154397.1| ribosomal protein s6 [Variovorax paradoxus EPS]
gi|315595220|gb|ADU36286.1| ribosomal protein S6 [Variovorax paradoxus EPS]
Length = 124
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ LI GG+V V + G R +AY+I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGLITAGGGKVHRVEDWGRRQLAYQINKLNKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEAEQAVMGELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|226326634|ref|ZP_03802152.1| hypothetical protein PROPEN_00484 [Proteus penneri ATCC 35198]
gi|225204855|gb|EEG87209.1| hypothetical protein PROPEN_00484 [Proteus penneri ATCC 35198]
Length = 132
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYKTAITNANGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ +P I E++ R ++ VLR++ + E SP + + R D D
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVLRNMIMRTKHAVTEASPMVKAKDERRRDIADDLDG 119
Query: 119 DRNVDRKQHVSEE 131
+ VD SEE
Sbjct: 120 EEEVDDVAEDSEE 132
>gi|54310419|ref|YP_131439.1| 30S ribosomal protein S6 [Photobacterium profundum SS9]
gi|61216203|sp|Q6LM41|RS6_PHOPR RecName: Full=30S ribosomal protein S6
gi|46914860|emb|CAG21637.1| putative ribosomal protein S6 [Photobacterium profundum SS9]
Length = 147
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-----RDDRNDR 115
V MNI + + + E++ R ++ V+R++ + + P+ ++ + RDDR +R
Sbjct: 60 VLMNIEAEQSVVDELESTFRFNDAVIRNMIMRAKNAVTEPSPMMKAKEERFTKRDDREER 119
Query: 116 FPRDRNV 122
R
Sbjct: 120 SDRSEAP 126
>gi|152997468|ref|YP_001342303.1| 30S ribosomal protein S6 [Marinomonas sp. MWYL1]
gi|189045475|sp|A6W0Y9|RS6_MARMS RecName: Full=30S ribosomal protein S6
gi|150838392|gb|ABR72368.1| ribosomal protein S6 [Marinomonas sp. MWYL1]
Length = 134
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMVERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR-D 119
V MNI + + E+ R ++ ++R+L + + R+DR R +
Sbjct: 60 VLMNIECSDSVLSELNDTFRYNDAIIRNLVIRRKEAVTDVSPIKASEGREDRRSAPQREE 119
Query: 120 RNVDRKQHVSEEK 132
RN D VSEE
Sbjct: 120 RNHDNSDEVSEES 132
>gi|269137724|ref|YP_003294424.1| 30S ribosomal protein S6 [Edwardsiella tarda EIB202]
gi|267983384|gb|ACY83213.1| 30S ribosomal protein S6 [Edwardsiella tarda EIB202]
gi|304557780|gb|ADM40444.1| SSU ribosomal protein S6p [Edwardsiella tarda FL6-60]
Length = 131
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + I E++ R ++ V+RS+ + + ++ + +R +R + F +
Sbjct: 60 VLMNVEASQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ + + SEE
Sbjct: 120 TSEETEAGDSEE 131
>gi|114332339|ref|YP_748561.1| 30S ribosomal protein S6 [Nitrosomonas eutropha C91]
gi|122313013|sp|Q0ADI6|RS6_NITEC RecName: Full=30S ribosomal protein S6
gi|114309353|gb|ABI60596.1| SSU ribosomal protein S6P [Nitrosomonas eutropha C91]
Length = 144
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S+Q+ I +Y ++I E G + + + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIIFIVHPD-QSEQVSAMIERYSNMITERSGGIHRLEDWGRRQLTYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ----RHDRDDRNDRF 116
+ MNI +++E++ + ++ +LR L + ++ +P+ +Q + D + R
Sbjct: 60 ILMNIECDQESLNELEHSFKFNDAILRHLVIRMNGPVTTPSPMMQDDKSKPDENSRGTAA 119
Query: 117 PRDRNVDRKQHVSE 130
P D ++
Sbjct: 120 PTVNVADDSASGAQ 133
>gi|257093838|ref|YP_003167479.1| 30S ribosomal protein S6 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046362|gb|ACV35550.1| ribosomal protein S6 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 128
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ I +Y++LI G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLIVHPD-QSEQVPAMIDRYKTLIASRAGQIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V +NI + E++ + ++ +LR LT+ +P+ ++
Sbjct: 60 VLLNIECDNTTLAELEHGFKFNDAILRHLTIKTKRAVTTPSPMMKDE 106
>gi|82703072|ref|YP_412638.1| 30S ribosomal protein S6 [Nitrosospira multiformis ATCC 25196]
gi|91207923|sp|Q2Y7M5|RS6_NITMU RecName: Full=30S ribosomal protein S6
gi|82411137|gb|ABB75246.1| SSU ribosomal protein S6P [Nitrosospira multiformis ATCC 25196]
Length = 125
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++++ G+V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVSAMIERYRNIVTARNGQVHRLEDWGRRQLAYLIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E++ + ++ +LR LTL +D +P+ + R+++ P+
Sbjct: 60 VLMNIECDQETLDELEHAFKFNDAILRHLTLKMDEPVTAPSPMM----REEKAKSAPQPA 115
Query: 121 NVDRKQHVS 129
++ ++
Sbjct: 116 EEAKETTLA 124
>gi|30248222|ref|NP_840292.1| 30S ribosomal protein S6 [Nitrosomonas europaea ATCC 19718]
gi|61215748|sp|Q82XQ6|RS6_NITEU RecName: Full=30S ribosomal protein S6
gi|30180107|emb|CAD84109.1| Ribosomal protein S6 [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ +Y +++ G++ + + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVSAMTERYSNIVTGRSGKIHRLEDWGRRQLTYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI +++E++ + ++ +LR L + ++ +P+ +Q +
Sbjct: 60 VLMNIECDQESLNELEHSFKFNDAILRHLVIRMNGPITTPSPMMQEGKSRPPHSSDEDSE 119
Query: 121 NVDRKQHVSEEKP 133
N + + + P
Sbjct: 120 NTAPAKAKTADSP 132
>gi|319763796|ref|YP_004127733.1| ribosomal protein s6 [Alicycliphilus denitrificans BC]
gi|330823940|ref|YP_004387243.1| 30S ribosomal protein S6 [Alicycliphilus denitrificans K601]
gi|317118357|gb|ADV00846.1| ribosomal protein S6 [Alicycliphilus denitrificans BC]
gi|329309312|gb|AEB83727.1| ribosomal protein S6 [Alicycliphilus denitrificans K601]
Length = 124
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGQVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|145588607|ref|YP_001155204.1| 30S ribosomal protein S6 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189045486|sp|A4SVX6|RS6_POLSQ RecName: Full=30S ribosomal protein S6
gi|145047013|gb|ABP33640.1| SSU ribosomal protein S6P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 124
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKATLAAAGGKIHRIEDWGRRQMAYMIDKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V MNI + E++ + ++ VLR L + E P++ ++ R++ D
Sbjct: 60 VCMNIECDQKTLEELEHAFKFNDAVLRHLIIKTKKAETEPSIMMKEVQREEARKSAQSD 118
>gi|325132477|gb|EGC55170.1| ribosomal protein S6 [Neisseria meningitidis M6190]
Length = 122
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|163797516|ref|ZP_02191467.1| Ribosomal protein S6 [alpha proteobacterium BAL199]
gi|159177265|gb|EDP61824.1| Ribosomal protein S6 [alpha proteobacterium BAL199]
Length = 158
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 75/107 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+ RQDISS Q++ I Q+ ++ GGEV+ G+R++AYRI+KNRK +Y
Sbjct: 1 MSYYESVFIARQDISSTQVEQLIEQFAEIVATGGGEVKKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V N+ +P AA+ EM+R MR++E++LR LT+ VD+ E+ P++ +Q
Sbjct: 61 VLFNLDAPAAAVSEMERLMRLNEDILRYLTVKVDALEEGPSVMMQAK 107
>gi|307546116|ref|YP_003898595.1| 30S ribosomal protein S6 [Halomonas elongata DSM 2581]
gi|307218140|emb|CBV43410.1| 30S ribosomal protein S6 [Halomonas elongata DSM 2581]
Length = 123
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y ++ ENGG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMVERYTGIVTENGGTVHRLEDWGRRHMAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + E++ R ++ ++RSL + + ++ D+ R D PR
Sbjct: 60 VLMNVECSGETLEEIENIFRFNDAIIRSLVVRCKEAITEASPMMKPAEDKRARRDEKPRT 119
>gi|261254039|ref|ZP_05946612.1| SSU ribosomal protein S6p [Vibrio orientalis CIP 102891]
gi|260937430|gb|EEX93419.1| SSU ribosomal protein S6p [Vibrio orientalis CIP 102891]
Length = 126
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MN+ + A I E++ R ++ VLR++ + + ++ +++
Sbjct: 60 VLMNVEAGQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQK 106
>gi|260773679|ref|ZP_05882595.1| SSU ribosomal protein S6p [Vibrio metschnikovii CIP 69.14]
gi|260612818|gb|EEX38021.1| SSU ribosomal protein S6p [Vibrio metschnikovii CIP 69.14]
Length = 122
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTVHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A I E++ R ++ VLR++ + + P++ ++ D + + +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEPSIMLKARDERSKREEVKFEA 119
Query: 121 NVD 123
+ +
Sbjct: 120 DAE 122
>gi|92113016|ref|YP_572944.1| SSU ribosomal protein S6P [Chromohalobacter salexigens DSM 3043]
gi|122420514|sp|Q1QZ63|RS6_CHRSD RecName: Full=30S ribosomal protein S6
gi|91796106|gb|ABE58245.1| SSU ribosomal protein S6P [Chromohalobacter salexigens DSM 3043]
Length = 135
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y L+ ENGG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMVERYTGLVTENGGTVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ----RHDRDDRNDRF 116
V MNI + E++ R ++ ++RSL + + ++ + R +
Sbjct: 60 VLMNIECSGETLDEIENIFRFNDAIIRSLVVRCKEAITEASPMMKPAEEKPRRREEKSER 119
Query: 117 PRDRNVDRKQHVSE 130
PR + +E
Sbjct: 120 PRTERNEEAPADAE 133
>gi|225075140|ref|ZP_03718339.1| hypothetical protein NEIFLAOT_00140 [Neisseria flavescens
NRL30031/H210]
gi|224953624|gb|EEG34833.1| hypothetical protein NEIFLAOT_00140 [Neisseria flavescens
NRL30031/H210]
Length = 123
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|114564512|ref|YP_752026.1| 30S ribosomal protein S6 [Shewanella frigidimarina NCIMB 400]
gi|122298730|sp|Q07XS7|RS6_SHEFN RecName: Full=30S ribosomal protein S6
gi|114335805|gb|ABI73187.1| SSU ribosomal protein S6P [Shewanella frigidimarina NCIMB 400]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I G V + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITAANGTVHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ + +I E++ R ++ VLR++ + + + + D D DR
Sbjct: 60 VLLNVEASAESIEELETAFRFNDAVLRNMVMRTKAAVTEASPMAKARDERDSRRSPSDDR 119
Query: 121 NVDRKQHVSEE 131
NV+ + E
Sbjct: 120 NVEESAEENAE 130
>gi|310815619|ref|YP_003963583.1| 30S ribosomal protein S6 [Ketogulonicigenium vulgare Y25]
gi|308754354|gb|ADO42283.1| 30S ribosomal protein S6 [Ketogulonicigenium vulgare Y25]
Length = 128
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 78/116 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG V L G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSAVLADNGGAVVLSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
++ +P AA+ EM+R R+ ++V+R LT+ VD+HE P++ +Q+ D DR +R
Sbjct: 61 AYLRTDAPAAAVLEMERLARLHDDVMRVLTIKVDAHEDGPSVQMQKRDERDRGERG 116
>gi|15677189|ref|NP_274342.1| 30S ribosomal protein S6 [Neisseria meningitidis MC58]
gi|13959510|sp|Q9JZ29|RS6_NEIMB RecName: Full=30S ribosomal protein S6
gi|7226565|gb|AAF41698.1| 30S ribosomal protein S6 [Neisseria meningitidis MC58]
Length = 122
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ +LR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAILRHLTIKTKHAVTEASPML 103
>gi|251788411|ref|YP_003003132.1| 30S ribosomal protein S6 [Dickeya zeae Ech1591]
gi|271501891|ref|YP_003334917.1| 30S ribosomal protein S6 [Dickeya dadantii Ech586]
gi|247537032|gb|ACT05653.1| ribosomal protein S6 [Dickeya zeae Ech1591]
gi|270345446|gb|ACZ78211.1| ribosomal protein S6 [Dickeya dadantii Ech586]
Length = 130
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P I E++ R ++ V+RS+ + V + ++ D +
Sbjct: 60 VLLNVEAPQEVIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERRDEYAEA 119
Query: 121 NVDRKQHVSEE 131
+ D + SEE
Sbjct: 120 DDDAEVGDSEE 130
>gi|120600214|ref|YP_964788.1| 30S ribosomal protein S6 [Shewanella sp. W3-18-1]
gi|146291858|ref|YP_001182282.1| 30S ribosomal protein S6 [Shewanella putrefaciens CN-32]
gi|166227384|sp|A4Y3F0|RS6_SHEPC RecName: Full=30S ribosomal protein S6
gi|166227386|sp|A1RNI9|RS6_SHESW RecName: Full=30S ribosomal protein S6
gi|120560307|gb|ABM26234.1| SSU ribosomal protein S6P [Shewanella sp. W3-18-1]
gi|145563548|gb|ABP74483.1| SSU ribosomal protein S6P [Shewanella putrefaciens CN-32]
gi|319425092|gb|ADV53166.1| ribosomal protein S6 [Shewanella putrefaciens 200]
Length = 131
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + + D D R P
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASPMARARDERDSR-RGPAGE 118
Query: 121 NVDRKQHVSE 130
+ H E
Sbjct: 119 RSYDEAHAEE 128
>gi|261365212|ref|ZP_05978095.1| ribosomal protein S6 [Neisseria mucosa ATCC 25996]
gi|288566474|gb|EFC88034.1| ribosomal protein S6 [Neisseria mucosa ATCC 25996]
Length = 123
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKAMIAEASGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR LT+ + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPML 103
>gi|119947022|ref|YP_944702.1| ribosomal protein S6 [Psychromonas ingrahamii 37]
gi|166227370|sp|A1T038|RS6_PSYIN RecName: Full=30S ribosomal protein S6
gi|119865626|gb|ABM05103.1| SSU ribosomal protein S6P [Psychromonas ingrahamii 37]
Length = 133
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I E GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVNGMIERYTASITEAGGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MNI + I +++ R +++V+R++ + + ++ + R +R +R R PR
Sbjct: 60 VLMNIEAGQNVIDDLENAFRFNDSVIRNMIMRTKTAVTEVSVVAKAREERVERAPRAPRP 119
Query: 120 R 120
Sbjct: 120 E 120
>gi|257465545|ref|ZP_05629916.1| 30S ribosomal protein S6 [Actinobacillus minor 202]
gi|257451205|gb|EEV25248.1| 30S ribosomal protein S6 [Actinobacillus minor 202]
Length = 123
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASIKDAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V MN+ +P + I E++ R ++ VLR+L + + + ++ +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPMVKAKE 107
>gi|163803109|ref|ZP_02196993.1| 30S ribosomal protein S6 [Vibrio sp. AND4]
gi|312881935|ref|ZP_07741692.1| 30S ribosomal protein S6 [Vibrio caribbenthicus ATCC BAA-2122]
gi|159173101|gb|EDP57933.1| 30S ribosomal protein S6 [Vibrio sp. AND4]
gi|309370371|gb|EFP97866.1| 30S ribosomal protein S6 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 126
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MN+ + A I E++ R ++ VLR++ + + ++ +++
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQK 106
>gi|94501372|ref|ZP_01307892.1| ribosomal protein S6 [Oceanobacter sp. RED65]
gi|94426485|gb|EAT11473.1| ribosomal protein S6 [Oceanobacter sp. RED65]
Length = 137
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y I+E GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPSMIERYTGSIKEAGGQIHRLEDWGRRHLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + E+ R ++ V+RS+ + + + R DR D +
Sbjct: 60 VLMNIECDNDTLAELNNTFRFNDAVIRSMVIRMKDAVTEASPIKAAESRQDRRDEPKAEP 119
Query: 121 NVDRKQ 126
+ K
Sbjct: 120 KAETKS 125
>gi|319405480|emb|CBI79099.1| 30S ribosomal protein S6 [Bartonella sp. AR 15-3]
Length = 135
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/128 (45%), Positives = 88/128 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL+RQDI+ QQI + + Y+ +I+ +GG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLVRQDIAPQQIDELLETYKGVIEAHGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P AI E++R+MRI+E++LR +T+ V HE+ + T+ R +RD +
Sbjct: 61 VLINIDAPAQAIAELERQMRINEDILRYMTIHVKKHEKEQSTTLSRFNRDSLPAQNEEKA 120
Query: 121 NVDRKQHV 128
R+QH
Sbjct: 121 QNLRRQHE 128
>gi|319408307|emb|CBI81960.1| 30S ribosomal protein S6 [Bartonella schoenbuchensis R1]
Length = 135
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 86/129 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQ ++ QQI + + Y+++I+ +GG + + G+ T+AYRIRKNRKA+Y
Sbjct: 1 MALYEHVFLARQGVTPQQIDELLKIYKNVIEAHGGTIGRIENWGLCTLAYRIRKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P AA+ E++R+MRI+E+VLR +T+ V+ HE+ + + R +++D +
Sbjct: 61 VLLNIDAPAAAMAEIERQMRINEDVLRYMTIRVEKHEKEQSAMLSRSNQEDSFSKNEERS 120
Query: 121 NVDRKQHVS 129
R QH
Sbjct: 121 RPTRHQHED 129
>gi|254507380|ref|ZP_05119515.1| ribosomal protein S6 [Vibrio parahaemolyticus 16]
gi|323496052|ref|ZP_08101112.1| 30S ribosomal protein S6 [Vibrio sinaloensis DSM 21326]
gi|219549636|gb|EED26626.1| ribosomal protein S6 [Vibrio parahaemolyticus 16]
gi|323318796|gb|EGA71747.1| 30S ribosomal protein S6 [Vibrio sinaloensis DSM 21326]
Length = 126
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MN+ + A I E++ R ++ VLR++ + + ++ +++
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKTAITEQSIMLKQK 106
>gi|260775636|ref|ZP_05884533.1| SSU ribosomal protein S6p [Vibrio coralliilyticus ATCC BAA-450]
gi|260608817|gb|EEX34982.1| SSU ribosomal protein S6p [Vibrio coralliilyticus ATCC BAA-450]
Length = 126
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A I E++ R ++ VLR++ + + ++ +++ + +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQKEERAPRREERTEA 119
Query: 121 NVDRKQH 127
+
Sbjct: 120 KPEAAAE 126
>gi|56552121|ref|YP_162960.1| 30S ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762067|ref|ZP_04760151.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752354|ref|YP_003225247.1| 30S ribosomal protein S6 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|61216127|sp|Q5NN61|RS6_ZYMMO RecName: Full=30S ribosomal protein S6
gi|56543695|gb|AAV89849.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373533|gb|EER63120.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258551717|gb|ACV74663.1| ribosomal protein S6 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 124
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 73/107 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ S+I+E G+V G+R +AYRI+KNRKAYY
Sbjct: 1 MPLYEHVFLARQDLAQTQVDGLAATATSIIEEKSGKVVKTEIWGLRNLAYRIQKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + I +P AI E++R+M ++E+V+R +T+ VD+HEQ P+ ++R
Sbjct: 61 IMLEIDAPADAIQELERQMALNEDVIRYMTVRVDAHEQGPSAMMRRG 107
>gi|124266719|ref|YP_001020723.1| 30S ribosomal protein S6 [Methylibium petroleiphilum PM1]
gi|166227339|sp|A2SFZ9|RS6_METPP RecName: Full=30S ribosomal protein S6
gi|124259494|gb|ABM94488.1| SSU ribosomal protein S6P [Methylibium petroleiphilum PM1]
Length = 122
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ L+ GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGLVTAAGGKVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +NI + E++ + ++ VLR LT++ E +P++ ++ +R++
Sbjct: 60 LCLNIECSKETLLELETGFKFNDAVLRHLTVVKSKAETAPSIMMKAVEREESRKAPQPQE 119
Query: 121 NV 122
Sbjct: 120 AA 121
>gi|118588141|ref|ZP_01545551.1| 30S ribosomal protein S6 [Stappia aggregata IAM 12614]
gi|118439763|gb|EAV46394.1| 30S ribosomal protein S6 [Stappia aggregata IAM 12614]
Length = 148
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + QY+ LI+ GG V V G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSAQQVEQLVEQYKGLIEGAGGTVGKVENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E++LR +T VD ++ P+ +Q+
Sbjct: 61 TLMNINAPHAAVAEMERQMGLSEDILRFMTFKVDELDEEPSAMMQK 106
>gi|241764687|ref|ZP_04762699.1| ribosomal protein S6 [Acidovorax delafieldii 2AN]
gi|241365857|gb|EER60506.1| ribosomal protein S6 [Acidovorax delafieldii 2AN]
Length = 125
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGPSSMMKTVEREE 110
>gi|296136560|ref|YP_003643802.1| ribosomal protein S6 [Thiomonas intermedia K12]
gi|294340688|emb|CAZ89080.1| 30S ribosomal protein S6 [Thiomonas sp. 3As]
gi|295796682|gb|ADG31472.1| ribosomal protein S6 [Thiomonas intermedia K12]
Length = 120
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V + D S+Q+ I +Y+S + G++ V + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLIFHPD-QSEQVPAMIERYKSAVTAKAGQIHRVEDWGRRQLAYPIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
MNI + E++ + ++ VLRSL + D E +P++ +++ +RD+
Sbjct: 60 ACMNIECDLETLRELEHSFKFNDAVLRSLVIKTDKAETAPSIMMKQVERDE 110
>gi|300721498|ref|YP_003710773.1| 30S ribosomal subunit protein S6 [Xenorhabdus nematophila ATCC
19061]
gi|297627990|emb|CBJ88539.1| 30S ribosomal subunit protein S6 [Xenorhabdus nematophila ATCC
19061]
Length = 132
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + V + ++ D D +
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRSRDLVLEEG 119
Query: 121 NVD--RKQHVSEE 131
VD + SEE
Sbjct: 120 LVDDVDEAGDSEE 132
>gi|261345207|ref|ZP_05972851.1| ribosomal protein S6 [Providencia rustigianii DSM 4541]
gi|282566900|gb|EFB72435.1| ribosomal protein S6 [Providencia rustigianii DSM 4541]
Length = 131
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + + + ++ D +R RD
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRLKHAVTEASPMVKAKD-----ERRGRDL 114
Query: 121 NVDRKQHVSEEK 132
+ D + EE
Sbjct: 115 SDDYQDEEVEEA 126
>gi|240140757|ref|YP_002965237.1| 30S ribosomal protein S6 [Methylobacterium extorquens AM1]
gi|240010734|gb|ACS41960.1| 30S ribosomal protein S6 [Methylobacterium extorquens AM1]
Length = 148
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAAVAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|163853341|ref|YP_001641384.1| ribosomal protein S6 [Methylobacterium extorquens PA1]
gi|218532198|ref|YP_002423014.1| 30S ribosomal protein S6 [Methylobacterium chloromethanicum CM4]
gi|254563267|ref|YP_003070362.1| 30S ribosomal protein S6 [Methylobacterium extorquens DM4]
gi|226703485|sp|A9W8G4|RS6_METEP RecName: Full=30S ribosomal protein S6
gi|254765443|sp|B7L2P2|RS6_METC4 RecName: Full=30S ribosomal protein S6
gi|163664946|gb|ABY32313.1| ribosomal protein S6 [Methylobacterium extorquens PA1]
gi|218524501|gb|ACK85086.1| ribosomal protein S6 [Methylobacterium chloromethanicum CM4]
gi|254270545|emb|CAX26548.1| 30S ribosomal protein S6 [Methylobacterium extorquens DM4]
Length = 151
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAAVAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|330445013|ref|ZP_08308667.1| ribosomal protein S6 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493131|dbj|GAA03164.1| ribosomal protein S6 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 128
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD--DRNDRFPR 118
V MN+ + + + E++ R ++ V+R++ + + P+ ++ + R DR
Sbjct: 60 VLMNVEAEQSVVDELESNFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDRAEA 119
Query: 119 DRNVDRKQH 127
+
Sbjct: 120 QSEGEAAAE 128
>gi|49475326|ref|YP_033367.1| 30S ribosomal protein S6 [Bartonella henselae str. Houston-1]
gi|61215539|sp|Q6G446|RS6_BARHE RecName: Full=30S ribosomal protein S6
gi|49238132|emb|CAF27340.1| 30S ribosomal protein s6 [Bartonella henselae str. Houston-1]
Length = 135
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 6/135 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+ +I+ GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDIAPQQVDELLNIYKGVIETYGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
V +NI +P AI E++R+MRI+E++LR +T+ V+ HE+ + R DR D+++
Sbjct: 61 VLVNIDAPATAIAEVERQMRINEDILRYMTIRVEKHEKEKSAMFSRLDRNGHIGHDEKHP 120
Query: 115 RFPRDRNVDRKQHVS 129
R P + D + V
Sbjct: 121 RSPSRQREDVIEGVE 135
>gi|307946730|ref|ZP_07662065.1| 30S ribosomal protein S6 [Roseibium sp. TrichSKD4]
gi|307770394|gb|EFO29620.1| 30S ribosomal protein S6 [Roseibium sp. TrichSKD4]
Length = 136
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ++ + QY+ +++ GG V + G+R++AYRI+KNRKA+Y
Sbjct: 1 MPLYEHVFLARQDVSAQQVEQLVEQYKGVLEAGGGSVGKIENWGLRSLAYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+M + E++LR +T V+ HE+ P+ +Q+
Sbjct: 61 TLMNITAPHAAVAEMERQMGLSEDILRFMTFKVEEHEEEPSAMMQK 106
>gi|323493031|ref|ZP_08098166.1| 30S ribosomal protein S6 [Vibrio brasiliensis LMG 20546]
gi|323312729|gb|EGA65858.1| 30S ribosomal protein S6 [Vibrio brasiliensis LMG 20546]
Length = 126
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A I E++ R ++ VLR++ + + ++ +++ + +
Sbjct: 60 VLMNVEADQAVIDELETAFRFNDAVLRNMIMRTKTAITEQSIMLKQKEERAPRREERAES 119
Query: 121 NVDRKQH 127
+
Sbjct: 120 KPEAAAE 126
>gi|114762811|ref|ZP_01442243.1| ribosomal protein S6 [Pelagibaca bermudensis HTCC2601]
gi|114544421|gb|EAU47428.1| ribosomal protein S6 [Roseovarius sp. HTCC2601]
Length = 118
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLVEHFGTVLSDNGGKVVESEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLKTDAPATAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|289810179|ref|ZP_06540808.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 123
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ +P I E++ R ++ V+RS+ + + ++ + +R +R D F +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANE 119
Query: 120 RNVD 123
D
Sbjct: 120 TADD 123
>gi|113971592|ref|YP_735385.1| 30S ribosomal protein S6 [Shewanella sp. MR-4]
gi|114046196|ref|YP_736746.1| 30S ribosomal protein S6 [Shewanella sp. MR-7]
gi|123131744|sp|Q0HYW6|RS6_SHESR RecName: Full=30S ribosomal protein S6
gi|123324698|sp|Q0HF39|RS6_SHESM RecName: Full=30S ribosomal protein S6
gi|113886276|gb|ABI40328.1| SSU ribosomal protein S6P [Shewanella sp. MR-4]
gi|113887638|gb|ABI41689.1| SSU ribosomal protein S6P [Shewanella sp. MR-7]
Length = 131
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + + D D DR
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASPMAKAKDERDSRRGPAGDR 119
Query: 121 NVDRKQHVS 129
+ D
Sbjct: 120 SYDEANAEE 128
>gi|212709962|ref|ZP_03318090.1| hypothetical protein PROVALCAL_01013 [Providencia alcalifaciens DSM
30120]
gi|212687371|gb|EEB46899.1| hypothetical protein PROVALCAL_01013 [Providencia alcalifaciens DSM
30120]
Length = 131
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N+ +P AI E++ R ++ V+RS+ + + + ++ D +R RD
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRLKHAVTEASPMVKAKD-----ERRGRDM 114
Query: 121 NVDRKQHVSEE 131
+ D + +EE
Sbjct: 115 SDDYQDEEAEE 125
>gi|262275144|ref|ZP_06052955.1| SSU ribosomal protein S6p [Grimontia hollisae CIP 101886]
gi|262221707|gb|EEY73021.1| SSU ribosomal protein S6p [Grimontia hollisae CIP 101886]
Length = 131
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+E+GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSIKESGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MN+ + + I E++ R ++ V+R++ + P++ ++
Sbjct: 60 VLMNVEAEQSVIDELETAFRFNDAVIRNMIMRTKGAITEPSVMMKAK 106
>gi|85374299|ref|YP_458361.1| 30S ribosomal protein S6 [Erythrobacter litoralis HTCC2594]
gi|84787382|gb|ABC63564.1| ribosomal protein S6 [Erythrobacter litoralis HTCC2594]
Length = 126
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 82/121 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S Q+ +I++N G+V G++ +AY+I +NRKA++
Sbjct: 6 MALYEHIFLARQDLSQSQVDALAATATDIIEKNDGKVTKTETWGLKNLAYKIDRNRKAHF 65
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P + + E++R+ RI+E+V+R +T+ V+ HE+ P++ ++++DRD++ R +R
Sbjct: 66 VMLNIEGPGSVVAELERQTRINEDVIRYMTIRVEEHEEGPSVMMRKNDRDNKKRRDREER 125
Query: 121 N 121
N
Sbjct: 126 N 126
>gi|74318123|ref|YP_315863.1| 30S ribosomal protein S6 [Thiobacillus denitrificans ATCC 25259]
gi|91207799|sp|Q3SH31|RS6_THIDA RecName: Full=30S ribosomal protein S6
gi|74057618|gb|AAZ98058.1| ribosomal protein S6 [Thiobacillus denitrificans ATCC 25259]
Length = 127
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I GG V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYRANIAARGGNVHRLEDWGRRQMAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + E++ + ++ VLR LT+ D+ + + ++ D
Sbjct: 60 VLMNIECDQETLEELEHGFKFNDAVLRHLTIKRDAAVTAASPMMKEEKARD 110
>gi|84393176|ref|ZP_00991940.1| 30S ribosomal protein S6 [Vibrio splendidus 12B01]
gi|86148224|ref|ZP_01066521.1| 30S ribosomal protein S6 [Vibrio sp. MED222]
gi|218708333|ref|YP_002415954.1| 30S ribosomal protein S6 [Vibrio splendidus LGP32]
gi|254765464|sp|B7VI65|RS6_VIBSL RecName: Full=30S ribosomal protein S6
gi|84376228|gb|EAP93112.1| 30S ribosomal protein S6 [Vibrio splendidus 12B01]
gi|85833994|gb|EAQ52155.1| 30S ribosomal protein S6 [Vibrio sp. MED222]
gi|218321352|emb|CAV17302.1| ribosomal protein S6 [Vibrio splendidus LGP32]
Length = 137
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + + E++ R ++ VLR++ + ++ ++ +++R +R PR
Sbjct: 60 VLMNVEAGQEVMDELETAFRFNDAVLRNMIMRTKGAVTEQSIMLK--QKEERAERAPRRD 117
Query: 121 N 121
+
Sbjct: 118 D 118
>gi|153007914|ref|YP_001369129.1| 30S ribosomal protein S6 [Ochrobactrum anthropi ATCC 49188]
gi|166227357|sp|A6WWE6|RS6_OCHA4 RecName: Full=30S ribosomal protein S6
gi|151559802|gb|ABS13300.1| ribosomal protein S6 [Ochrobactrum anthropi ATCC 49188]
Length = 151
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 53/104 (50%), Positives = 75/104 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + QY+ +++ NGG+V V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQYKGVLEANGGKVGKVESWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE+ + +
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAML 104
>gi|159044729|ref|YP_001533523.1| 30S ribosomal protein S6 [Dinoroseobacter shibae DFL 12]
gi|189045465|sp|A8LQQ5|RS6_DINSH RecName: Full=30S ribosomal protein S6
gi|157912489|gb|ABV93922.1| 30S ribosomal protein S6 [Dinoroseobacter shibae DFL 12]
Length = 117
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + S++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAESLVEHFGSVLADNGGKVVDSEYWGLKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R +T+ VD H + P++ +Q+
Sbjct: 61 AFLKTDAPAPAVQEMERLMRLHDDVMRVMTIKVDEHPEGPSIQMQK 106
>gi|24375418|ref|NP_719461.1| 30S ribosomal protein S6 [Shewanella oneidensis MR-1]
gi|32171551|sp|Q8EAH2|RS6_SHEON RecName: Full=30S ribosomal protein S6
gi|24350259|gb|AAN56905.1|AE015825_4 ribosomal protein S6 [Shewanella oneidensis MR-1]
Length = 131
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + + D D DR
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKGAITEASPMAKAKDERDSRRGPAGDR 119
Query: 121 NVDRKQHVS 129
+ D
Sbjct: 120 SYDEANAEE 128
>gi|316933693|ref|YP_004108675.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris DX-1]
gi|315601407|gb|ADU43942.1| ribosomal protein S6 [Rhodopseudomonas palustris DX-1]
Length = 158
Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEELTTQITGVIESLGGKVTKTESWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR---------DD 111
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ +++ DR +
Sbjct: 61 VLLNIDGPAAVVAEIERQERINEDVIRYLTVRVDEHEEGPSAMMRKADRDRERDDRGPRE 120
Query: 112 RNDRFPRDRNVDRK 125
R R+ DR
Sbjct: 121 GGFRGDREGRGDRD 134
>gi|23501356|ref|NP_697483.1| 30S ribosomal protein S6 [Brucella suis 1330]
gi|161618426|ref|YP_001592313.1| 30S ribosomal protein S6 [Brucella canis ATCC 23365]
gi|254703806|ref|ZP_05165634.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
gi|260566941|ref|ZP_05837411.1| ribosomal protein S6 [Brucella suis bv. 4 str. 40]
gi|261754453|ref|ZP_05998162.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
gi|32171565|sp|Q8G274|RS6_BRUSU RecName: Full=30S ribosomal protein S6
gi|189045456|sp|A9M8X8|RS6_BRUC2 RecName: Full=30S ribosomal protein S6
gi|23347249|gb|AAN29398.1| ribosomal protein S6 [Brucella suis 1330]
gi|161335237|gb|ABX61542.1| ribosomal protein S6 [Brucella canis ATCC 23365]
gi|260156459|gb|EEW91539.1| ribosomal protein S6 [Brucella suis bv. 4 str. 40]
gi|261744206|gb|EEY32132.1| 30S ribosomal protein S6 [Brucella suis bv. 3 str. 686]
Length = 148
Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE+ + +
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAML 104
>gi|154253798|ref|YP_001414622.1| 30S ribosomal protein S6 [Parvibaculum lavamentivorans DS-1]
gi|189045484|sp|A7HYI2|RS6_PARL1 RecName: Full=30S ribosomal protein S6
gi|154157748|gb|ABS64965.1| ribosomal protein S6 [Parvibaculum lavamentivorans DS-1]
Length = 155
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F+ RQD+S QQ++ Q+ ++I+E GG+V G+R +A++++KNRK +Y
Sbjct: 1 MALYEHIFIARQDVSQQQVEALTEQFSNIIKEQGGQVGKTEYWGLRNLAFKVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P AA+ EM+R+M I E+VLR +T+ V+ HE P+ +Q
Sbjct: 61 TLVNIDAPHAAVAEMERQMGISEDVLRFITVRVEEHETEPSAMMQS 106
>gi|304392027|ref|ZP_07373969.1| ribosomal protein S6 [Ahrensia sp. R2A130]
gi|303296256|gb|EFL90614.1| ribosomal protein S6 [Ahrensia sp. R2A130]
Length = 121
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F+ RQD+SSQQ+ + ++ +++ NGG V + G++T+ YR++KNRKA+Y
Sbjct: 1 MALYEHIFMARQDVSSQQVDTLVEHFKGVLEANGGSVGKIENWGLKTLPYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P A+ EM+R+MRI E+VLR +T+ V+ HE +P+ +++
Sbjct: 61 ALINIDAPSDAVAEMERQMRIHEDVLRYMTVKVEEHEDAPSAMLRK 106
>gi|224824685|ref|ZP_03697792.1| ribosomal protein S6 [Lutiella nitroferrum 2002]
gi|224603178|gb|EEG09354.1| ribosomal protein S6 [Lutiella nitroferrum 2002]
Length = 125
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + E++ + ++ VLR LT+ +D + ++ D +N P+
Sbjct: 60 VLMNVECQAETLAEIEHAFKFNDAVLRHLTIKLDRAVTEASPMMK--DEKAKNLLEPQQP 117
Query: 121 NVDRK 125
+ +
Sbjct: 118 AAEAE 122
>gi|62289440|ref|YP_221233.1| 30S ribosomal protein S6 [Brucella abortus bv. 1 str. 9-941]
gi|82699366|ref|YP_413940.1| 30S ribosomal protein S6 [Brucella melitensis biovar Abortus 2308]
gi|189023690|ref|YP_001934458.1| 30S ribosomal protein S6 [Brucella abortus S19]
gi|225851991|ref|YP_002732224.1| 30S ribosomal protein S6 [Brucella melitensis ATCC 23457]
gi|254688752|ref|ZP_05152006.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|254693235|ref|ZP_05155063.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|254696881|ref|ZP_05158709.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701259|ref|ZP_05163087.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|254707816|ref|ZP_05169644.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|254709602|ref|ZP_05171413.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|254712982|ref|ZP_05174793.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|254716664|ref|ZP_05178475.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|254718631|ref|ZP_05180442.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|254729785|ref|ZP_05188363.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|256031094|ref|ZP_05444708.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|256060588|ref|ZP_05450756.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|256112979|ref|ZP_05453882.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|256159167|ref|ZP_05456980.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|256254497|ref|ZP_05460033.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|256256999|ref|ZP_05462535.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|256264502|ref|ZP_05467034.1| ribosomal protein S6 [Brucella melitensis bv. 2 str. 63/9]
gi|256368908|ref|YP_003106414.1| 30S ribosomal protein S6 [Brucella microti CCM 4915]
gi|260168225|ref|ZP_05755036.1| 30S ribosomal protein S6 [Brucella sp. F5/99]
gi|260545809|ref|ZP_05821550.1| ribosomal protein S6 [Brucella abortus NCTC 8038]
gi|260754231|ref|ZP_05866579.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|260757451|ref|ZP_05869799.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|260761276|ref|ZP_05873619.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883257|ref|ZP_05894871.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|261213478|ref|ZP_05927759.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|261218465|ref|ZP_05932746.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|261221671|ref|ZP_05935952.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|261315303|ref|ZP_05954500.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|261317130|ref|ZP_05956327.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|261320685|ref|ZP_05959882.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|261324584|ref|ZP_05963781.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|261751798|ref|ZP_05995507.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|261757686|ref|ZP_06001395.1| ribosomal protein S6 [Brucella sp. F5/99]
gi|265983610|ref|ZP_06096345.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|265988168|ref|ZP_06100725.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|265994414|ref|ZP_06106971.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|265997634|ref|ZP_06110191.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|294851833|ref|ZP_06792506.1| small subunit ribosomal protein S6 [Brucella sp. NVSL 07-0026]
gi|297247852|ref|ZP_06931570.1| small subunit ribosomal protein S6 [Brucella abortus bv. 5 str.
B3196]
gi|306839849|ref|ZP_07472647.1| ribosomal protein S6 [Brucella sp. NF 2653]
gi|306842260|ref|ZP_07474923.1| ribosomal protein S6 [Brucella sp. BO2]
gi|75497231|sp|Q57ER2|RS6_BRUAB RecName: Full=30S ribosomal protein S6
gi|91207903|sp|Q2YMG9|RS6_BRUA2 RecName: Full=30S ribosomal protein S6
gi|226703429|sp|B2S9V4|RS6_BRUA1 RecName: Full=30S ribosomal protein S6
gi|254765224|sp|C0RHG2|RS6_BRUMB RecName: Full=30S ribosomal protein S6
gi|62195572|gb|AAX73872.1| RpsF, ribosomal protein S6 [Brucella abortus bv. 1 str. 9-941]
gi|82615467|emb|CAJ10436.1| Ribosomal protein S6 [Brucella melitensis biovar Abortus 2308]
gi|189019262|gb|ACD71984.1| Ribosomal protein S6 [Brucella abortus S19]
gi|225640356|gb|ACO00270.1| ribosomal protein S6 [Brucella melitensis ATCC 23457]
gi|255999066|gb|ACU47465.1| 30S ribosomal protein S6 [Brucella microti CCM 4915]
gi|260097216|gb|EEW81091.1| ribosomal protein S6 [Brucella abortus NCTC 8038]
gi|260667769|gb|EEX54709.1| 30S ribosomal protein S6 [Brucella abortus bv. 4 str. 292]
gi|260671708|gb|EEX58529.1| 30S ribosomal protein S6 [Brucella abortus bv. 2 str. 86/8/59]
gi|260674339|gb|EEX61160.1| 30S ribosomal protein S6 [Brucella abortus bv. 6 str. 870]
gi|260872785|gb|EEX79854.1| 30S ribosomal protein S6 [Brucella abortus bv. 9 str. C68]
gi|260915085|gb|EEX81946.1| 30S ribosomal protein S6 [Brucella abortus bv. 3 str. Tulya]
gi|260920255|gb|EEX86908.1| 30S ribosomal protein S6 [Brucella ceti B1/94]
gi|260923554|gb|EEX90122.1| 30S ribosomal protein S6 [Brucella ceti M13/05/1]
gi|261293375|gb|EEX96871.1| 30S ribosomal protein S6 [Brucella ceti M644/93/1]
gi|261296353|gb|EEX99849.1| 30S ribosomal protein S6 [Brucella pinnipedialis B2/94]
gi|261300564|gb|EEY04061.1| 30S ribosomal protein S6 [Brucella neotomae 5K33]
gi|261304329|gb|EEY07826.1| 30S ribosomal protein S6 [Brucella pinnipedialis M163/99/10]
gi|261737670|gb|EEY25666.1| ribosomal protein S6 [Brucella sp. F5/99]
gi|261741551|gb|EEY29477.1| 30S ribosomal protein S6 [Brucella suis bv. 5 str. 513]
gi|262552102|gb|EEZ08092.1| 30S ribosomal protein S6 [Brucella ceti M490/95/1]
gi|262765527|gb|EEZ11316.1| 30S ribosomal protein S6 [Brucella melitensis bv. 3 str. Ether]
gi|263094835|gb|EEZ18573.1| ribosomal protein S6 [Brucella melitensis bv. 2 str. 63/9]
gi|264660365|gb|EEZ30626.1| 30S ribosomal protein S6 [Brucella pinnipedialis M292/94/1]
gi|264662202|gb|EEZ32463.1| 30S ribosomal protein S6 [Brucella sp. 83/13]
gi|294820422|gb|EFG37421.1| small subunit ribosomal protein S6 [Brucella sp. NVSL 07-0026]
gi|297175021|gb|EFH34368.1| small subunit ribosomal protein S6 [Brucella abortus bv. 5 str.
B3196]
gi|306287640|gb|EFM59087.1| ribosomal protein S6 [Brucella sp. BO2]
gi|306405035|gb|EFM61316.1| ribosomal protein S6 [Brucella sp. NF 2653]
gi|326408487|gb|ADZ65552.1| Ribosomal protein S6 [Brucella melitensis M28]
gi|326538203|gb|ADZ86418.1| ribosomal protein S6 [Brucella melitensis M5-90]
Length = 148
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE+ + +
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAML 104
>gi|325144537|gb|EGC66836.1| ribosomal protein S6 [Neisseria meningitidis M01-240013]
Length = 122
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+++I E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
V MNI + P + E++ R ++ VLR L + + +
Sbjct: 60 VLMNIETTPEVVEELETAFRFNDAVLRHLAIKTKHAVTEASPML 103
>gi|188583607|ref|YP_001927052.1| 30S ribosomal protein S6 [Methylobacterium populi BJ001]
gi|226703486|sp|B1ZFQ8|RS6_METPB RecName: Full=30S ribosomal protein S6
gi|179347105|gb|ACB82517.1| ribosomal protein S6 [Methylobacterium populi BJ001]
Length = 151
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ++ + Y+ +I+ GG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVETMVETYKGVIETGGGTIEKIESWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI++PPAA+ EM+R+M+I E+VLR +T+ V+ E P+ +Q+
Sbjct: 61 TLLNISAPPAALAEMERQMQISEDVLRFMTVRVEQLEAEPSAMMQK 106
>gi|34499095|ref|NP_903310.1| 30S ribosomal protein S6 [Chromobacterium violaceum ATCC 12472]
gi|61215686|sp|Q7NRY7|RS6_CHRVO RecName: Full=30S ribosomal protein S6
gi|34104946|gb|AAQ61302.1| 30S ribosomal protein S6 [Chromobacterium violaceum ATCC 12472]
Length = 124
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + E++ + ++ VLR LT+ +D + ++ + D P
Sbjct: 60 VLMNVECQAETLAEIEHAFKFNDAVLRHLTIKMDRAISDASPMMKDEKAKNLLDAQPAAE 119
>gi|167855347|ref|ZP_02478114.1| 30S ribosomal protein S6 [Haemophilus parasuis 29755]
gi|219871262|ref|YP_002475637.1| 30S ribosomal protein S6 [Haemophilus parasuis SH0165]
gi|254765440|sp|B8F5T7|RS6_HAEPS RecName: Full=30S ribosomal protein S6
gi|167853495|gb|EDS24742.1| 30S ribosomal protein S6 [Haemophilus parasuis 29755]
gi|219691466|gb|ACL32689.1| 30S ribosomal protein S6 [Haemophilus parasuis SH0165]
Length = 126
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MN+ +P I E++ R ++ VLRSL L + + ++ D
Sbjct: 60 VLMNVEAPQNVIDELETNFRYNDAVLRSLVLHTKAAVTEASPMLKAKDERK 110
>gi|300023233|ref|YP_003755844.1| ribosomal protein S6 [Hyphomicrobium denitrificans ATCC 51888]
gi|299525054|gb|ADJ23523.1| ribosomal protein S6 [Hyphomicrobium denitrificans ATCC 51888]
Length = 179
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 80/111 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH FL RQD++ Q++ + ++Q +++E G+V G++ +A++I+KNRKA+Y
Sbjct: 1 MPLYEHTFLARQDVTQAQVEALMKEFQDVVEEGQGKVTKQEYWGLKNLAFKIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F NI +PPAA+ EM+R+M I+ +V+R LT+ V+ HE P++ +++ DR++
Sbjct: 61 AFFNIDAPPAAVTEMERRMGINSDVIRFLTIRVEEHETEPSVQMRKQDREE 111
>gi|238918384|ref|YP_002931898.1| 30S ribosomal protein S6 [Edwardsiella ictaluri 93-146]
gi|259495333|sp|C5BF77|RS6_EDWI9 RecName: Full=30S ribosomal protein S6
gi|238867952|gb|ACR67663.1| ribosomal protein S6, putative [Edwardsiella ictaluri 93-146]
Length = 131
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITGAEGKIHRLEDWGRRQLAYSINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + I E++ R ++ V+RS+ + + ++ + +R +R + F +
Sbjct: 60 VLMNVEASQEVIDELETNFRYNDAVIRSMVMRTKHAVTEASPMVKAKDERRERREDFANE 119
Query: 120 RNVDRKQHVSEE 131
+ + + SEE
Sbjct: 120 TSEETEAGDSEE 131
>gi|59712919|ref|YP_205695.1| 30S ribosomal protein S6 [Vibrio fischeri ES114]
gi|197336125|ref|YP_002157108.1| ribosomal protein S6 [Vibrio fischeri MJ11]
gi|75353318|sp|Q5E2D9|RS6_VIBF1 RecName: Full=30S ribosomal protein S6
gi|226705646|sp|B5FBQ3|RS6_VIBFM RecName: Full=30S ribosomal protein S6
gi|59481020|gb|AAW86807.1| 30S ribosomal subunit protein S6 [Vibrio fischeri ES114]
gi|197317615|gb|ACH67062.1| ribosomal protein S6 [Vibrio fischeri MJ11]
Length = 126
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRN 113
V MN+ S A I E++ R ++ VLR++ + + P++ ++ + +R +
Sbjct: 60 VLMNVESEQAVIDELETAFRYNDAVLRNMIMRTKAAITEPSVMMKAKEERSAKR 113
>gi|198284527|ref|YP_002220848.1| 30S ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666120|ref|YP_002427194.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226703409|sp|B7J917|RS6_ACIF2 RecName: Full=30S ribosomal protein S6
gi|226703410|sp|B5EPA0|RS6_ACIF5 RecName: Full=30S ribosomal protein S6
gi|198249048|gb|ACH84641.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518333|gb|ACK78919.1| ribosomal protein S6 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 134
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ +I+ +GG + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPQMIERYRGMIESDGGHFHRLEDWGRRQLAYPIKKAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A+ E++ R ++ VLR L L D SP+ + R + D R
Sbjct: 60 VLMNIECSSVALAELEDAFRFNDAVLRHLILARDEAVTSPSF-LARDETDRRERSEETAE 118
Query: 121 NVDRKQHVSEEKPLS 135
H + E ++
Sbjct: 119 GEGEPDHSANEAVVT 133
>gi|119471284|ref|ZP_01613787.1| 30S ribosomal protein S6 [Alteromonadales bacterium TW-7]
gi|119445750|gb|EAW27033.1| 30S ribosomal protein S6 [Alteromonadales bacterium TW-7]
Length = 113
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGSIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MN+ +P I E++ R ++ VLR+L + S + + ++
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVIRTKSAVTEASPLAREEKKE 109
>gi|171059511|ref|YP_001791860.1| 30S ribosomal protein S6 [Leptothrix cholodnii SP-6]
gi|226703484|sp|B1XXH5|RS6_LEPCP RecName: Full=30S ribosomal protein S6
gi|170776956|gb|ACB35095.1| ribosomal protein S6 [Leptothrix cholodnii SP-6]
Length = 121
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y++L+ G+V V + G +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSEQVPAMLERYKTLVTAANGKVHRVEDWGRFQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +NI + E++ R ++ VLR LT+ D E P+ ++R ++++ ++
Sbjct: 60 LCLNIECSKETLAEIETGFRFNDAVLRHLTVKRDKAETGPSAVMKRVEKEEARKSSQQET 119
Query: 121 NV 122
Sbjct: 120 AA 121
>gi|319943301|ref|ZP_08017584.1| 30S ribosomal protein S6 [Lautropia mirabilis ATCC 51599]
gi|319743843|gb|EFV96247.1| 30S ribosomal protein S6 [Lautropia mirabilis ATCC 51599]
Length = 129
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ +++ G++ V + G +AY I+K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIDRYKQMVEGANGKMHRVEDWGRLQLAYPIQKIGKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MN+ + E++ R ++ VLR L + +D E P++ +R +++
Sbjct: 60 VLMNVECDQHTLGEIENAFRFNDAVLRHLVVRMDKAETGPSVMSKRLQKEESR 112
>gi|209696172|ref|YP_002264102.1| 30S ribosomal protein S6 [Aliivibrio salmonicida LFI1238]
gi|226703414|sp|B6EMP6|RS6_ALISL RecName: Full=30S ribosomal protein S6
gi|208010125|emb|CAQ80450.1| 30S ribosomal protein S6 [Aliivibrio salmonicida LFI1238]
Length = 126
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MN+ S AAI E++ R ++ VLR++ + + P++ ++ +
Sbjct: 60 VLMNVESEQAAIDELETAFRYNDAVLRNMIMRTKAAITEPSVMMKAKEER 109
>gi|85713278|ref|ZP_01044301.1| 30S ribosomal protein S6 [Idiomarina baltica OS145]
gi|85692896|gb|EAQ30871.1| 30S ribosomal protein S6 [Idiomarina baltica OS145]
Length = 115
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSETIKQGGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI + + E++ R ++ VLR+L + P+ ++ +R
Sbjct: 60 VLLNIEANAEVVDELETAFRFNDAVLRNLVMRKKEAITEPSPLTKKEER 108
>gi|160900661|ref|YP_001566243.1| 30S ribosomal protein S6 [Delftia acidovorans SPH-1]
gi|226703450|sp|A9BNG3|RS6_DELAS RecName: Full=30S ribosomal protein S6
gi|160366245|gb|ABX37858.1| ribosomal protein S6 [Delftia acidovorans SPH-1]
Length = 120
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ + +P+ ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKADTAPSSMMKTVEREE 110
>gi|161579540|ref|YP_114470.2| 30S ribosomal protein S6 [Methylococcus capsulatus str. Bath]
gi|61215443|sp|Q606H8|RS6_METCA RecName: Full=30S ribosomal protein S6
Length = 136
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ I +Y+S+I+ G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSGQVPAMIERYRSIIEGAAGRIHRLEDWGRRQLAYPIAKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A + E++ R ++ VLRSLT+ D P+ + D DR P D
Sbjct: 60 VLMNIECDQATLEELESGFRFNDAVLRSLTIRRDEAVTEPSALARSGS-DAEADRAPADE 118
Query: 121 N 121
Sbjct: 119 G 119
>gi|114704792|ref|ZP_01437700.1| 30S ribosomal protein S6 [Fulvimarina pelagi HTCC2506]
gi|114539577|gb|EAU42697.1| 30S ribosomal protein S6 [Fulvimarina pelagi HTCC2506]
Length = 155
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+ Q++ + + +++ GG+V V G++T+AYR+ KNRKA+Y
Sbjct: 7 MALYEHVFLARQDVSNNQVEQLVENLRGILESGGGKVGKVENWGLKTLAYRMDKNRKAHY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+HEM+R+MR +E++LR +T+ VD HE P+ +Q+
Sbjct: 67 TLMNIDAPSAAVHEMERQMRFNEDILRFMTIRVDEHEDGPSAMMQK 112
>gi|240850219|ref|YP_002971612.1| 30S ribosomal protein S6 [Bartonella grahamii as4aup]
gi|240267342|gb|ACS50930.1| 30S ribosomal protein S6 [Bartonella grahamii as4aup]
Length = 135
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+ +I+ +GG+V + G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDITPQQVDELLSLYKGVIEAHGGKVGRIENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
+NI +P +AI E++R+MRI+E++LR +T+ V+ HE+ + + DR D+
Sbjct: 61 TLVNIDAPASAIAEVERQMRINEDILRYMTIRVEKHEKEKSAMLSHLDRNSHIGQDEERP 120
Query: 115 RFPRDRNVDRKQHVS 129
RFPR + + + V
Sbjct: 121 RFPRRQRENAIEGVE 135
>gi|88810598|ref|ZP_01125855.1| Ribosomal protein S6 [Nitrococcus mobilis Nb-231]
gi|88792228|gb|EAR23338.1| Ribosomal protein S6 [Nitrococcus mobilis Nb-231]
Length = 141
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y+SLI+ NGG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSDQVSAMIERYRSLIEGNGGQIHRLEDWGRRQLAYPIKKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-----RDDRNDR 115
+ MN+ P + E+ R ++ V+R + L P+ + D R +R D+
Sbjct: 60 ILMNVECRPENMEELVSMFRFNDAVIRHMVLSRQEAITDPSPLAKSQDEERGARGERLDK 119
Query: 116 FPRDRNVDRKQHVSEEK 132
R DR + SE++
Sbjct: 120 QGRTDKPDRSETESEQE 136
>gi|269103598|ref|ZP_06156295.1| SSU ribosomal protein S6p [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163496|gb|EEZ41992.1| SSU ribosomal protein S6p [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 128
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD--DRNDRFPR 118
V MN+ + A I E++ R ++ V+R++ + P+ ++ + R +R
Sbjct: 60 VLMNVEAEQAVIDELESNFRFNDAVIRNMIMRTKGAITEPSPMMKAKEERFTKREERAEA 119
Query: 119 DRNVDRKQH 127
+
Sbjct: 120 QSEGEAAAE 128
>gi|182679259|ref|YP_001833405.1| 30S ribosomal protein S6 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226703422|sp|B2IHD1|RS6_BEII9 RecName: Full=30S ribosomal protein S6
gi|182635142|gb|ACB95916.1| ribosomal protein S6 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 151
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 82/111 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV+L RQDIS+QQ++ Q +S+I+ G+V V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHVYLARQDISAQQVEALTEQLKSVIESFQGKVTKVEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+NI +P AA+ EM+R+M I+E+VLR +TL V+ HEQ P+ +++ D DD
Sbjct: 61 SLLNIEAPAAALTEMERQMGINEDVLRFMTLRVEEHEQGPSAMMRKRDDDD 111
>gi|212633589|ref|YP_002310114.1| 30S ribosomal protein S6 [Shewanella piezotolerans WP3]
gi|226695131|sp|B8CIQ1|RS6_SHEPW RecName: Full=30S ribosomal protein S6
gi|212555073|gb|ACJ27527.1| Ribosomal protein S6 [Shewanella piezotolerans WP3]
Length = 137
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + ++ E++ R ++ VLRS+ + + + + + +RD R R
Sbjct: 60 VLMNVETTAESVEELETAFRFNDAVLRSMVMRTKAAITEASPMAKAKDERDTRRSSEERA 119
Query: 120 RNVDRKQHVSEEK 132
+ + V E
Sbjct: 120 PRAEATEEVKESA 132
>gi|126665194|ref|ZP_01736177.1| ribosomal protein S6 [Marinobacter sp. ELB17]
gi|126630564|gb|EBA01179.1| ribosomal protein S6 [Marinobacter sp. ELB17]
Length = 138
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y SLI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFMVHPD-QSEQVPAMIERYTSLITEDGGQVDRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI A+ E+ R ++ ++R L L D + R+DR R D
Sbjct: 60 VLMNIQCSQTAMDELTHNFRFNDAIIRELILRRDEAVTDMSPMKSAESREDR--RPSGDD 117
Query: 121 NVDRKQHVSEEK 132
R E +
Sbjct: 118 RPRRSAESDESQ 129
>gi|117919153|ref|YP_868345.1| 30S ribosomal protein S6 [Shewanella sp. ANA-3]
gi|166227385|sp|A0KT20|RS6_SHESA RecName: Full=30S ribosomal protein S6
gi|117611485|gb|ABK46939.1| SSU ribosomal protein S6P [Shewanella sp. ANA-3]
Length = 131
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + + D D DR
Sbjct: 60 VLMNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASPMAKAKDERDSRRGPAGDR 119
Query: 121 NVDRKQHVS 129
+ D
Sbjct: 120 SYDEANAEE 128
>gi|148981038|ref|ZP_01816258.1| 30S ribosomal protein S6 [Vibrionales bacterium SWAT-3]
gi|145961014|gb|EDK26337.1| 30S ribosomal protein S6 [Vibrionales bacterium SWAT-3]
Length = 129
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 9/135 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGTIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + I E++ R ++ VLR++ + ++ ++ +++R +R PR
Sbjct: 60 VLMNVEAGQEVIDELETAFRFNDAVLRNMIMRTKGAVTEQSIMLK--QKEERAERAPR-- 115
Query: 121 NVDRKQHVSEEKPLS 135
++ +E KP +
Sbjct: 116 ----REERTEAKPEA 126
>gi|91791879|ref|YP_561530.1| 30S ribosomal protein S6 [Shewanella denitrificans OS217]
gi|123061287|sp|Q12RW9|RS6_SHEDO RecName: Full=30S ribosomal protein S6
gi|91713881|gb|ABE53807.1| SSU ribosomal protein S6P [Shewanella denitrificans OS217]
Length = 130
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I G + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSGVITAANGTIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + +I E++ R ++ VLR++ + + + D D R P D
Sbjct: 60 VLMNVEATAESIEELETAFRFNDAVLRNMVMRTKVAVTEASPMAKARDERDSR-RSPSDD 118
Query: 121 NV 122
+
Sbjct: 119 RI 120
>gi|319898718|ref|YP_004158811.1| 30S ribosomal protein S6 [Bartonella clarridgeiae 73]
gi|319402682|emb|CBI76228.1| 30S ribosomal protein S6 [Bartonella clarridgeiae 73]
Length = 135
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDI+ Q+I + + Y+ +I+ +GG+V + G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHVFLARQDIAPQRIDELLETYKGVIEAHGGKVGRIENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI +P AAI E++R+MRI+E++LR +T+ V+ HE+ + T+ R +RDD + +
Sbjct: 61 VLMNIDAPAAAIVELERQMRINEDILRYMTIRVEKHEKEQSTTLSRLNRDDFPSK--NEE 118
Query: 121 NVDRKQHVSEEKPLS 135
H E
Sbjct: 119 KGQNLHHQRENPTEG 133
>gi|260427680|ref|ZP_05781659.1| ribosomal protein S6 [Citreicella sp. SE45]
gi|260422172|gb|EEX15423.1| ribosomal protein S6 [Citreicella sp. SE45]
Length = 118
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLVEHFGTVLSDNGGKIVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLRTDAPAAAVQEMERLMRLHDDVMRVLTIKVEEHAEGPSVQMQK 106
>gi|183600322|ref|ZP_02961815.1| hypothetical protein PROSTU_03884 [Providencia stuartii ATCC 25827]
gi|188020112|gb|EDU58152.1| hypothetical protein PROSTU_03884 [Providencia stuartii ATCC 25827]
Length = 131
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P AI E++ R ++ V+RS+ + V + ++ D +R RD
Sbjct: 60 VLMNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKD-----ERRSRDL 114
Query: 121 NVDRKQHVSEEK 132
+ + +EE
Sbjct: 115 ADEYQDEEAEEA 126
>gi|255262950|ref|ZP_05342292.1| ribosomal protein S6 [Thalassiobium sp. R2A62]
gi|255105285|gb|EET47959.1| ribosomal protein S6 [Thalassiobium sp. R2A62]
Length = 117
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNTQAESLIEHFSTVLADNGGKVADSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD HE+ P++ +Q+
Sbjct: 61 AFLRSDAPAPAVQEMERLMRLHDDVMRVLTIKVDEHEEGPSVQMQK 106
>gi|83949660|ref|ZP_00958393.1| ribosomal protein S6 [Roseovarius nubinhibens ISM]
gi|83837559|gb|EAP76855.1| ribosomal protein S6 [Roseovarius nubinhibens ISM]
Length = 118
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNTQAEGLVEHFGTVLSDNGGKVVESEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLKSDAPAAAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|53729064|ref|ZP_00348308.1| COG0360: Ribosomal protein S6 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|165976599|ref|YP_001652192.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190150499|ref|YP_001969024.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|254361767|ref|ZP_04977902.1| ribosomal protein S6 [Mannheimia haemolytica PHL213]
gi|261494031|ref|ZP_05990534.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496209|ref|ZP_05992615.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|303250079|ref|ZP_07336281.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303253252|ref|ZP_07339401.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307246087|ref|ZP_07528169.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307248195|ref|ZP_07530223.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307250427|ref|ZP_07532374.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307252812|ref|ZP_07534702.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307255068|ref|ZP_07536886.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307257227|ref|ZP_07538998.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307259505|ref|ZP_07541230.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261654|ref|ZP_07543321.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263842|ref|ZP_07545447.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322515406|ref|ZP_08068398.1| 30S ribosomal protein S6 [Actinobacillus ureae ATCC 25976]
gi|226703411|sp|B3GY59|RS6_ACTP7 RecName: Full=30S ribosomal protein S6
gi|226703412|sp|B0BQB3|RS6_ACTPJ RecName: Full=30S ribosomal protein S6
gi|153093302|gb|EDN74298.1| ribosomal protein S6 [Mannheimia haemolytica PHL213]
gi|165876700|gb|ABY69748.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189915630|gb|ACE61882.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|261308161|gb|EEY09458.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310197|gb|EEY11397.1| 30S ribosomal protein S6 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|302647934|gb|EFL78141.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302651142|gb|EFL81296.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306853022|gb|EFM85245.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306855372|gb|EFM87547.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306857556|gb|EFM89665.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306859711|gb|EFM91734.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861941|gb|EFM93917.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306864269|gb|EFM96181.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306866441|gb|EFM98304.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868646|gb|EFN00456.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870831|gb|EFN02570.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322118561|gb|EFX90793.1| 30S ribosomal protein S6 [Actinobacillus ureae ATCC 25976]
Length = 124
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V MN+ +P + I E++ R ++ VLR+L + + + ++ +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPMVKAKE 107
>gi|84684849|ref|ZP_01012749.1| Ribosomal protein S6 [Maritimibacter alkaliphilus HTCC2654]
gi|84667184|gb|EAQ13654.1| Ribosomal protein S6 [Rhodobacterales bacterium HTCC2654]
Length = 121
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNAQAEGLVEHFSTVLSDNGGKVVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +++
Sbjct: 61 AFLKTDAPSTAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMKK 106
>gi|260433336|ref|ZP_05787307.1| ribosomal protein S6 [Silicibacter lacuscaerulensis ITI-1157]
gi|260417164|gb|EEX10423.1| ribosomal protein S6 [Silicibacter lacuscaerulensis ITI-1157]
Length = 139
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 23 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNGGKLVDSEYWGVKTMAYKINKNRKGHY 82
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 83 AFLKTDAPAGAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 128
>gi|158425932|ref|YP_001527224.1| 30S ribosomal protein S6 [Azorhizobium caulinodans ORS 571]
gi|189045453|sp|A8HVF1|RS6_AZOC5 RecName: Full=30S ribosomal protein S6
gi|158332821|dbj|BAF90306.1| ribosomal protein S6 [Azorhizobium caulinodans ORS 571]
Length = 150
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/148 (41%), Positives = 94/148 (63%), Gaps = 17/148 (11%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL+RQD+++QQ+++ +++ +I+ NGG V V G++++ YRI+KNRKA++
Sbjct: 1 MSLYEHVFLVRQDVTAQQVEELAARFKGVIEANGGTVSKVEAWGVKSLTYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--------- 111
NI +P AA+ EM+R+M IDE+VLR LT+ VD E+ P+ +Q+ DRDD
Sbjct: 61 TLFNIDAPAAAVQEMERQMGIDEDVLRFLTIRVDELEEGPSAMLQKRDRDDRGERGERGF 120
Query: 112 -------RNDRFPRDRNV-DRKQHVSEE 131
DR R R DR++ +EE
Sbjct: 121 GGGGFGGGRDREDRPRRGRDREEAATEE 148
>gi|87199437|ref|YP_496694.1| 30S ribosomal protein S6 [Novosphingobium aromaticivorans DSM
12444]
gi|123489788|sp|Q2G8G3|RS6_NOVAD RecName: Full=30S ribosomal protein S6
gi|87135118|gb|ABD25860.1| SSU ribosomal protein S6P [Novosphingobium aromaticivorans DSM
12444]
Length = 120
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 74/108 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S Q+ +++ N G+V G+R++AY+I+KNRKA++
Sbjct: 1 MPLYEHVFLARQDLSQAQVDALAAAATEIVESNEGKVTKTETWGLRSLAYKIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI + A I E++R+ +I+E+V+R +T+ VD HE P++ ++++D
Sbjct: 61 VLLNIEASGATIAELERQTQINEDVIRYMTVRVDEHEAGPSVMMRKND 108
>gi|298291083|ref|YP_003693022.1| ribosomal protein S6 [Starkeya novella DSM 506]
gi|296927594|gb|ADH88403.1| ribosomal protein S6 [Starkeya novella DSM 506]
Length = 164
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/114 (46%), Positives = 84/114 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ+++ +++ +I+ NGG V G++T+ YRIRKNRKA++
Sbjct: 1 MALYEHVFLARQDVTAQQVEELTARFKGIIEANGGSVTKAEYWGVKTLTYRIRKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+N+ +P AAI E++R+ RIDE+VLR LT+ V+ E+ ++ +Q+ DRDDR +
Sbjct: 61 SLLNVDAPAAAIAELERQQRIDEDVLRFLTIRVEELEEGQSVMLQKRDRDDRGE 114
>gi|163868015|ref|YP_001609219.1| 30S ribosomal protein S6 [Bartonella tribocorum CIP 105476]
gi|189045455|sp|A9IRU5|RS6_BART1 RecName: Full=30S ribosomal protein S6
gi|161017666|emb|CAK01224.1| 30S ribosomal protein S6 [Bartonella tribocorum CIP 105476]
Length = 135
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/135 (43%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD++ QQ+ + + Y+ +I+ +GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHMFLARQDVAPQQVDELLSLYKGVIETHGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR------DDRND 114
V +NI +P AAI EM+R+MRI+E++LR +T+ V+ HE+ + + DR D+
Sbjct: 61 VLVNIDAPAAAIAEMERQMRINEDILRYMTIRVEKHEKEKSAMLSHLDRNAHAGQDEERS 120
Query: 115 RFPRDRNVDRKQHVS 129
R PR + + + V
Sbjct: 121 RSPRRQRENAIERVE 135
>gi|149913882|ref|ZP_01902414.1| 30S ribosomal protein S6 [Roseobacter sp. AzwK-3b]
gi|149812166|gb|EDM71997.1| 30S ribosomal protein S6 [Roseobacter sp. AzwK-3b]
Length = 126
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 10 MPLYEHVFIARQDLSNAQAEGLIEHFGTVLSDNGGKIVDSEYWGVKTMAYKINKNRKGHY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R +T+ VD H + P++ +Q+
Sbjct: 70 SFLRTDAPAPAVQEMERLMRLHDDVMRVMTIKVDEHAEGPSVQMQK 115
>gi|90581366|ref|ZP_01237162.1| 30S ribosomal protein S6 [Vibrio angustum S14]
gi|90437476|gb|EAS62671.1| 30S ribosomal protein S6 [Vibrio angustum S14]
Length = 129
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD--DRNDRFP 117
V MN+ + + + E++ R ++ V+R++ + + P+ ++ + R DR
Sbjct: 60 VLMNVEAEQSVVDELESNFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDRAE 118
>gi|145297776|ref|YP_001140617.1| 30S ribosomal protein S6 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|166226796|sp|A4SIZ7|RS6_AERS4 RecName: Full=30S ribosomal protein S6
gi|142850548|gb|ABO88869.1| ribosomal protein S6 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 129
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITTAGGTIHRMEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + A I E++ R ++ V+R++ + + + + +R R D R+
Sbjct: 60 VLMNVEAEQAVIDELETNFRFNDAVIRNMIMRTKHAVTEVSPMAKAKEERFVRRDDERRE 119
Query: 120 RNVDRKQHVSEE 131
V+ SEE
Sbjct: 120 DTVE--AASSEE 129
>gi|39936140|ref|NP_948416.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris CGA009]
gi|192291858|ref|YP_001992463.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris TIE-1]
gi|61216210|sp|Q6N5A4|RS6_RHOPA RecName: Full=30S ribosomal protein S6; AltName: Full=RRP-S6
gi|226695122|sp|B3Q9T5|RS6_RHOPT RecName: Full=30S ribosomal protein S6
gi|39649994|emb|CAE28518.1| possible 30S ribosomal protein S6 [Rhodopseudomonas palustris
CGA009]
gi|192285607|gb|ACF01988.1| ribosomal protein S6 [Rhodopseudomonas palustris TIE-1]
Length = 158
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEELTTQITGVIEGLGGKVTKTESWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR---------DD 111
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ +++ DR +
Sbjct: 61 VLLNIDGPAAVVSEIERQERINEDVIRYLTVRVDEHEEGPSAMMRKADRDRERDDRGPRE 120
Query: 112 RNDRFPRDRNVDRK 125
R R+ DR
Sbjct: 121 GGFRGDREGRGDRD 134
>gi|226941618|ref|YP_002796692.1| 30S ribosomal protein S6 [Laribacter hongkongensis HLHK9]
gi|254765441|sp|C1DCR4|RS6_LARHH RecName: Full=30S ribosomal protein S6
gi|226716545|gb|ACO75683.1| RpsF [Laribacter hongkongensis HLHK9]
Length = 125
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ + +Y+ ++ G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMVERYKGMVLGQNGKIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ + ++ VLR LT+ +D + ++
Sbjct: 60 VMMNIECGKETLEEIEHAFKFNDAVLRHLTIKMDRAVTEASPMMKEE 106
>gi|209964874|ref|YP_002297789.1| ribosomal protein S6 [Rhodospirillum centenum SW]
gi|226695121|sp|B6IN79|RS6_RHOCS RecName: Full=30S ribosomal protein S6
gi|209958340|gb|ACI98976.1| ribosomal protein S6 [Rhodospirillum centenum SW]
Length = 163
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/131 (39%), Positives = 84/131 (64%), Gaps = 7/131 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE + + RQDI++ Q++ + +++ENGGEV+ V + G++T+ YRI+KNRKA+Y
Sbjct: 1 MALYETILIARQDITASQVEGLTETFTGILKENGGEVKKVEQWGLKTLTYRIKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI-QRHDRDDR------N 113
V++ +P AA+ EM+R M I+E+VLR +T+ V+ E+ T + + +R +R
Sbjct: 61 VYIGHEAPAAAVAEMERNMSINEDVLRFMTVKVEKIEEGQTAMLTNKGERSERGPRGGFG 120
Query: 114 DRFPRDRNVDR 124
DR PR DR
Sbjct: 121 DRGPRRDFGDR 131
>gi|268592872|ref|ZP_06127093.1| ribosomal protein S6 [Providencia rettgeri DSM 1131]
gi|291311661|gb|EFE52114.1| ribosomal protein S6 [Providencia rettgeri DSM 1131]
Length = 131
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAVITNAQGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V +N+ +P AI E++ R ++ V+RS+ + + + ++ + +R R+
Sbjct: 60 VLLNVEAPQEAIDELETNFRFNDAVIRSMVMRLKHAVTEASPMVKAKDERRGRDMSDEYQ 119
Query: 120 RNVDRKQHVSEE 131
+ SEE
Sbjct: 120 DEEVEETGDSEE 131
>gi|294139214|ref|YP_003555192.1| 30S ribosomal protein S6 [Shewanella violacea DSS12]
gi|293325683|dbj|BAJ00414.1| ribosomal protein S6 [Shewanella violacea DSS12]
Length = 140
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPSMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + ++ E++ R ++ VLRS+ L + + + + +RD R
Sbjct: 60 VLMNVEASAESVEELETAFRFNDAVLRSMVLRTKAAITEASPMAKLKEERDSRRSTEGER 119
Query: 120 RNVDRKQHVSEEK 132
R+ ++ V E K
Sbjct: 120 RSAPAEKAVEEVK 132
>gi|240948274|ref|ZP_04752660.1| 30S ribosomal protein S6 [Actinobacillus minor NM305]
gi|240297313|gb|EER47854.1| 30S ribosomal protein S6 [Actinobacillus minor NM305]
Length = 122
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASIKDAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V MN+ +P + I E++ R ++ VLR+L + + + ++ +
Sbjct: 60 VLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPMVKAKE 107
>gi|90419489|ref|ZP_01227399.1| ribosomal protein S6 [Aurantimonas manganoxydans SI85-9A1]
gi|90336426|gb|EAS50167.1| ribosomal protein S6 [Aurantimonas manganoxydans SI85-9A1]
Length = 146
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 79/106 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ++ + Q + +++ NGG++ V G++T+ +RI+KNRKAYY
Sbjct: 1 MALYEHVFLARQDISNQQVEQLVEQLRGILETNGGKIGKVENWGLKTLTFRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
MNI +P AA+ EM+R+MR +E++LR +T+ V+ HE+ + +Q+
Sbjct: 61 TLMNIDAPSAAVQEMERQMRFNEDILRYMTIRVEEHEEGQSAMMQK 106
>gi|237809239|ref|YP_002893679.1| 30S ribosomal protein S6 [Tolumonas auensis DSM 9187]
gi|259495346|sp|C4LAB8|RS6_TOLAT RecName: Full=30S ribosomal protein S6
gi|237501500|gb|ACQ94093.1| ribosomal protein S6 [Tolumonas auensis DSM 9187]
Length = 124
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I+ GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAIKAAGGTIHRLEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
V MN+ + + I E++ R ++ V+R++ + + ++ + R +
Sbjct: 60 VLMNVEAEQSVIDELENNFRFNDAVIRNMIMRTKHAVTEASPMLKAREERPRRE 113
>gi|117617863|ref|YP_855252.1| 30S ribosomal protein S6 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330831138|ref|YP_004394090.1| 30S ribosomal protein S6 [Aeromonas veronii B565]
gi|166226795|sp|A0KG67|RS6_AERHH RecName: Full=30S ribosomal protein S6
gi|117559270|gb|ABK36218.1| ribosomal protein S6 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|328806274|gb|AEB51473.1| 30S ribosomal protein S6 [Aeromonas veronii B565]
Length = 128
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I +GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGAITTSGGTIHRLEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPR 118
V MN+ + A I E++ R ++ V+R++ + + + + +R R D R
Sbjct: 60 VLMNVEAEQAVIDELETNFRFNDAVIRNMIMRTKHAVTEVSPMAKAKEERFTRRDDERR 118
>gi|319787276|ref|YP_004146751.1| ribosomal protein S6 [Pseudoxanthomonas suwonensis 11-1]
gi|317465788|gb|ADV27520.1| ribosomal protein S6 [Pseudoxanthomonas suwonensis 11-1]
Length = 143
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ GG + + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYKGLIENAGGSIHRLEDWGRRQLAYPIQNLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
V N AAI E+ R ++ +LR L + D E +L ++ +D++ D+
Sbjct: 60 VLFNAEVTQAAIDELVETFRFNDAILRHLVIRRDGPETEQSLIMKS--KDEKGDKP 113
>gi|332535619|ref|ZP_08411385.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis ANT/505]
gi|332034974|gb|EGI71496.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis ANT/505]
Length = 113
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVTGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MN+ +P I E++ R ++ VLR+L + + + + ++
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVMRTKNAVTEASPLAREEKKE 109
>gi|94497410|ref|ZP_01303980.1| ribosomal protein S6 [Sphingomonas sp. SKA58]
gi|94423041|gb|EAT08072.1| ribosomal protein S6 [Sphingomonas sp. SKA58]
Length = 141
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 72/108 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ ++++ G+V V G+R++AY+I KNRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVEDMDGKVTKVETWGLRSLAYKIAKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V +NI +P + E++R+ +I+E+++R +T+ VD E P++ +++ +
Sbjct: 61 VMLNIDAPAGVVAELERQTQINEDIIRYMTVKVDELETGPSVMMRKQE 108
>gi|126725406|ref|ZP_01741248.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2150]
gi|126704610|gb|EBA03701.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2150]
Length = 118
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNTQAEGLIEHFTAVLADNGGKVVENEYWGIKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AI EM+R MR+ ++V+R LT+ VD+H++ P++ +Q+
Sbjct: 61 AFLKTDAPATAIQEMERLMRLHDDVMRILTIKVDAHDEGPSVQMQK 106
>gi|304413762|ref|ZP_07395206.1| 30S ribosomal subunit protein S6 [Candidatus Regiella insecticola
LSR1]
gi|304283853|gb|EFL92247.1| 30S ribosomal subunit protein S6 [Candidatus Regiella insecticola
LSR1]
Length = 133
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ D I +Y +I G++ + + G R +AY I K KA+Y
Sbjct: 6 MRHYEIVFMVHPD-QSEQVPDMIERYSQIITNANGQIHRLEDWGRRQLAYPINKLHKAHY 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V N+ + AI E+++ R E VLRSL + + ++ +D+R DR
Sbjct: 65 VLFNVEAAQEAIDELEKSFRFSEAVLRSLVMRSKGAVTEASPMVK--AKDERRDRVEFVP 122
Query: 121 NVDRKQHVSEE 131
+EE
Sbjct: 123 ENSSDTGDTEE 133
>gi|170751791|ref|YP_001758051.1| ribosomal protein S6 [Methylobacterium radiotolerans JCM 2831]
gi|226703487|sp|B1LYI4|RS6_METRJ RecName: Full=30S ribosomal protein S6
gi|170658313|gb|ACB27368.1| ribosomal protein S6 [Methylobacterium radiotolerans JCM 2831]
Length = 154
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 78/105 (74%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQD++SQQ++ I Y+ +I++NGG + + G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVLLARQDVTSQQVETMIDTYKGVIEQNGGRLEKIEMWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+NI +PPAAI EM+R+M+I E+VLR +T+ V+ + P+ +Q
Sbjct: 61 ALLNIDAPPAAIAEMERQMQISEDVLRFMTIRVEELDSEPSAMMQ 105
>gi|89075974|ref|ZP_01162346.1| 30S ribosomal protein S6 [Photobacterium sp. SKA34]
gi|89048323|gb|EAR53902.1| 30S ribosomal protein S6 [Photobacterium sp. SKA34]
Length = 129
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTAAIKDSGGQIHRLEDWGRRQMAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD--DRNDRFP 117
V MN+ + + + E++ R ++ V+R++ + + P+ ++ + R DR
Sbjct: 60 VLMNVEAEQSVVDELESSFRFNDAVIRNMIMRTKNAVTEPSPMMKAKEERFTKREDRAE 118
>gi|315125712|ref|YP_004067715.1| 30S ribosomal protein S6 [Pseudoalteromonas sp. SM9913]
gi|315014226|gb|ADT67564.1| 30S ribosomal protein S6 [Pseudoalteromonas sp. SM9913]
Length = 113
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSGMIERYTGSITEAGGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MN+ +P I E++ R ++ VLR+L + + + ++ ++
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVMRTKNAVTEASPLVREEKKE 109
>gi|77463710|ref|YP_353214.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides 2.4.1]
gi|91207787|sp|Q3J1M1|RS6_RHOS4 RecName: Full=30S ribosomal protein S6
gi|77388128|gb|ABA79313.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides 2.4.1]
Length = 132
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 76/111 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MSLYEHVFIARQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D +
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRDERE 111
>gi|126462539|ref|YP_001043653.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides ATCC 17029]
gi|221639576|ref|YP_002525838.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides KD131]
gi|332558561|ref|ZP_08412883.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides WS8N]
gi|166227373|sp|A3PKL5|RS6_RHOS1 RecName: Full=30S ribosomal protein S6
gi|254765450|sp|B9KJP0|RS6_RHOSK RecName: Full=30S ribosomal protein S6
gi|126104203|gb|ABN76881.1| SSU ribosomal protein S6P [Rhodobacter sphaeroides ATCC 17029]
gi|221160357|gb|ACM01337.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides KD131]
gi|332276273|gb|EGJ21588.1| 30S ribosomal protein S6 [Rhodobacter sphaeroides WS8N]
Length = 135
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 76/111 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MSLYEHVFIARQDLSNAQAEGLIEHFSTVLADNGGKVVDREYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ +P AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+ D +
Sbjct: 61 AFLKSDAPSAAVQEMERLMRLHDDVMRVLTIKVDKHAEGPSIQMQKRDERE 111
>gi|89900977|ref|YP_523448.1| 30S ribosomal protein S6 [Rhodoferax ferrireducens T118]
gi|123278761|sp|Q21WD6|RS6_RHOFD RecName: Full=30S ribosomal protein S6
gi|89345714|gb|ABD69917.1| SSU ribosomal protein S6P [Rhodoferax ferrireducens T118]
Length = 121
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ +I GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLVYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+L + P+ ++ +R+D
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVLKKKADTGPSSMMKTVERED 110
>gi|157373896|ref|YP_001472496.1| 30S ribosomal protein S6 [Shewanella sediminis HAW-EB3]
gi|189045587|sp|A8FR95|RS6_SHESH RecName: Full=30S ribosomal protein S6
gi|157316270|gb|ABV35368.1| ribosomal protein S6 [Shewanella sediminis HAW-EB3]
Length = 139
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG+V + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQVHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + ++ E++ R ++ VLRS+ + + + + D D +R
Sbjct: 60 VLMNVEASAESVEELETAFRFNDAVLRSMVMRTKAAITEASPMAKAKDERDSRRSSEGER 119
Query: 121 NVDRKQHVSEEK 132
+ E K
Sbjct: 120 RSAPAEATEEVK 131
>gi|119383642|ref|YP_914698.1| 30S ribosomal protein S6 [Paracoccus denitrificans PD1222]
gi|166227360|sp|A1B0F8|RS6_PARDP RecName: Full=30S ribosomal protein S6
gi|119373409|gb|ABL69002.1| SSU ribosomal protein S6P [Paracoccus denitrificans PD1222]
Length = 131
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + ++I +NGG+V G+RT+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSTVIADNGGKVVDNEYWGVRTLAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
++ +P AA+ EM+R R+ ++V+R LT+ VD H+ P++ +Q+
Sbjct: 61 AYLRSDAPSAAVQEMERLARLHDDVMRVLTVRVDEHKDGPSVQMQK 106
>gi|148653437|ref|YP_001280530.1| 30S ribosomal protein S6 [Psychrobacter sp. PRwf-1]
gi|189045489|sp|A5WFY9|RS6_PSYWF RecName: Full=30S ribosomal protein S6
gi|148572521|gb|ABQ94580.1| SSU ribosomal protein S6P [Psychrobacter sp. PRwf-1]
Length = 134
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S Q+ + +Y L+Q+N G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLIVHPD-QSDQVVGMVERYIKLVQDNNGMVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V NI A + E++ R ++ ++RSL + D P+ + + + R + PR
Sbjct: 60 VLFNIECDGATLEELEELFRYNDAIIRSLVVRRDDAITEPS-QLAKSADEKRARKAPRSE 118
Query: 121 N 121
N
Sbjct: 119 N 119
>gi|171463203|ref|YP_001797316.1| ribosomal protein S6 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226695112|sp|B1XTM5|RS6_POLNS RecName: Full=30S ribosomal protein S6
gi|171192741|gb|ACB43702.1| ribosomal protein S6 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 124
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ + GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPAMIDRYKATLAAVGGKIHRMEDWGRRQMAYMIDKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V MNI + E++ + ++ VLR L + E P++ ++ ++ D
Sbjct: 60 VCMNIECDQKTLEELEHAFKFNDAVLRHLIIKTKKAETEPSIMMKEVQHEEARKSAQSD 118
>gi|110634266|ref|YP_674474.1| 30S ribosomal protein S6 [Mesorhizobium sp. BNC1]
gi|123162195|sp|Q11H16|RS6_MESSB RecName: Full=30S ribosomal protein S6
gi|110285250|gb|ABG63309.1| SSU ribosomal protein S6P [Chelativorans sp. BNC1]
Length = 148
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 88/127 (69%), Gaps = 3/127 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+S+QQ+ + QY+ +I+ GG+V + G++++AYRI+KNRKAY+
Sbjct: 1 MALYEHVFLARQDLSAQQVDALVEQYKGVIESGGGKVGRIENWGVKSLAYRIKKNRKAYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ---RHDRDDRNDRFP 117
M++ +P A+ EM+R+M I E++LR +T+ V++HE+ P+ +Q +R DR DR P
Sbjct: 61 TLMDLDAPAEAVKEMERQMGISEDILRFMTIRVEAHEEGPSAMLQRRDDRERGDRGDRGP 120
Query: 118 RDRNVDR 124
R DR
Sbjct: 121 RRDFDDR 127
>gi|148559735|ref|YP_001258474.1| 30S ribosomal protein S6 [Brucella ovis ATCC 25840]
gi|225626963|ref|ZP_03785002.1| ribosomal protein S6 [Brucella ceti str. Cudo]
gi|237814928|ref|ZP_04593926.1| ribosomal protein S6 [Brucella abortus str. 2308 A]
gi|148370992|gb|ABQ60971.1| 30S ribosomal protein S6 [Brucella ovis ATCC 25840]
gi|225618620|gb|EEH15663.1| ribosomal protein S6 [Brucella ceti str. Cudo]
gi|237789765|gb|EEP63975.1| ribosomal protein S6 [Brucella abortus str. 2308 A]
Length = 156
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 9 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VLR LT+ V+ HE+ + +
Sbjct: 69 TLVNIDAPAAAVAEMERQMRINEDVLRFLTVRVEEHEEGQSAML 112
>gi|114319743|ref|YP_741426.1| 30S ribosomal protein S6 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312363|sp|Q0AB51|RS6_ALHEH RecName: Full=30S ribosomal protein S6
gi|114226137|gb|ABI55936.1| SSU ribosomal protein S6P [Alkalilimnicola ehrlichii MLHE-1]
Length = 119
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++ NGG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPSMIERYTGIVESNGGKVHRLEDWGRRQLAYPINKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MN+ + E++ R ++ V+R++ L D P+ + ++D+
Sbjct: 60 VLMNVECGKDELDELESLFRFNDAVIRNMVLGRDEAVTEPSPLARSQEKDEEE 112
>gi|261855981|ref|YP_003263264.1| ribosomal protein S6 [Halothiobacillus neapolitanus c2]
gi|261836450|gb|ACX96217.1| ribosomal protein S6 [Halothiobacillus neapolitanus c2]
Length = 142
Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ +I+ +GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYRGIIETSGGTVHRLEDWGRRQLAYPINKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN------- 113
V MN+ + AA+ E++ R ++ VLR LT ++ E P++ ++ D + R
Sbjct: 60 VMMNVEASQAAVAELEEAFRFNDAVLRHLTSRMEEAETEPSIIMRERDNERRPRRRDDEQ 119
Query: 114 DRFPRDRNVDRKQHVSEEKPLS 135
D DR+ D + E+ S
Sbjct: 120 DSGRFDRDDDDQAEQEEQVEAS 141
>gi|254473348|ref|ZP_05086745.1| 30S ribosomal protein S6 [Pseudovibrio sp. JE062]
gi|211957464|gb|EEA92667.1| 30S ribosomal protein S6 [Pseudovibrio sp. JE062]
Length = 140
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 56/140 (40%), Positives = 91/140 (65%), Gaps = 12/140 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQDIS+QQ++ + Q++++++ENGG+V + G+RT+ YRI KNRKA+Y
Sbjct: 1 MALYEHVFLARQDISTQQVEALVEQFKTVLEENGGKVGKIESWGLRTLTYRINKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-----------HDR 109
+ MN+ +P AA+ EM+R+ ++E++LR +T+ V+ ++ + +Q+ +DR
Sbjct: 61 ILMNVDAPHAAVAEMERQQGLNEDILRFMTIRVEELDEEQSAMMQKRDRDDRRRGDRNDR 120
Query: 110 DDRNDRFPR-DRNVDRKQHV 128
R DR PR DR +
Sbjct: 121 GPRPDRGPRPDRRPEAPAAE 140
>gi|254439789|ref|ZP_05053283.1| ribosomal protein S6 [Octadecabacter antarcticus 307]
gi|198255235|gb|EDY79549.1| ribosomal protein S6 [Octadecabacter antarcticus 307]
Length = 128
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +N G+V + G++T+AY+I KNRK +Y
Sbjct: 12 MPLYEHVFIARQDLSNTQAESLIEHFSTVLSDNDGKVVMSEYWGVKTMAYKINKNRKGHY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
FM +P A+ EM+R MR+ E+V+R LT+ VD+HE+ P++ +Q+
Sbjct: 72 AFMRSDAPAPAVQEMERLMRLHEDVMRILTIKVDAHEEGPSVQMQK 117
>gi|89068232|ref|ZP_01155642.1| Ribosomal protein S6 [Oceanicola granulosus HTCC2516]
gi|89046149|gb|EAR52207.1| Ribosomal protein S6 [Oceanicola granulosus HTCC2516]
Length = 118
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + ++ +N G+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLIEHFSQVLADNDGKVVDTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD HE+ P++ +Q+
Sbjct: 61 AFLKTDAPAPAVQEMERLMRLHDDVMRVLTIRVDEHEEGPSIQMQK 106
>gi|251793278|ref|YP_003008006.1| 30S ribosomal protein S6 [Aggregatibacter aphrophilus NJ8700]
gi|315633587|ref|ZP_07888877.1| 30S ribosomal protein S6 [Aggregatibacter segnis ATCC 33393]
gi|247534673|gb|ACS97919.1| ribosomal protein S6 [Aggregatibacter aphrophilus NJ8700]
gi|315477629|gb|EFU68371.1| 30S ribosomal protein S6 [Aggregatibacter segnis ATCC 33393]
Length = 125
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLRSL + + ++ D +
Sbjct: 60 VLMNVEAPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASPMVKAKDDRKALTEVESND 119
Query: 121 NVDRKQ 126
D ++
Sbjct: 120 FEDAEE 125
>gi|121595519|ref|YP_987415.1| 30S ribosomal protein S6 [Acidovorax sp. JS42]
gi|222111740|ref|YP_002554004.1| 30S ribosomal protein s6 [Acidovorax ebreus TPSY]
gi|166226793|sp|A1WAR4|RS6_ACISJ RecName: Full=30S ribosomal protein S6
gi|254765435|sp|B9MDJ5|RS6_DIAST RecName: Full=30S ribosomal protein S6
gi|120607599|gb|ABM43339.1| SSU ribosomal protein S6P [Acidovorax sp. JS42]
gi|221731184|gb|ACM34004.1| ribosomal protein S6 [Acidovorax ebreus TPSY]
Length = 125
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIVAGGGQVHRVEDWGRRQLAYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +NI + A + E++ + ++ VLR LT+ E + ++ +R++ +
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETGASSMMKTVEREEARKASQAEF 119
Query: 121 NVDRKQ 126
++
Sbjct: 120 AASNER 125
>gi|325922528|ref|ZP_08184289.1| SSU ribosomal protein S6P [Xanthomonas gardneri ATCC 19865]
gi|325546993|gb|EGD18086.1| SSU ribosomal protein S6P [Xanthomonas gardneri ATCC 19865]
Length = 144
Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+ R
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDKPERSER 119
Query: 122 VDRKQHVSEEKPLS 135
R + P +
Sbjct: 120 RRRDDDEGDAAPAA 133
>gi|157963400|ref|YP_001503434.1| 30S ribosomal protein S6 [Shewanella pealeana ATCC 700345]
gi|189045848|sp|A8H8L2|RS6_SHEPA RecName: Full=30S ribosomal protein S6
gi|157848400|gb|ABV88899.1| ribosomal protein S6 [Shewanella pealeana ATCC 700345]
Length = 137
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + A+ E++ R ++ VLRS+ + + + + + +RD R R
Sbjct: 60 VLMNVETTAEAVEELETAFRFNDAVLRSMVMRTKAAITEASPMAKAKDERDTRRSSEERA 119
Query: 120 RN 121
Sbjct: 120 PR 121
>gi|121605294|ref|YP_982623.1| 30S ribosomal protein S6 [Polaromonas naphthalenivorans CJ2]
gi|166227362|sp|A1VPX4|RS6_POLNA RecName: Full=30S ribosomal protein S6
gi|120594263|gb|ABM37702.1| SSU ribosomal protein S6P [Polaromonas naphthalenivorans CJ2]
Length = 121
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG V V + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGTVHRVEDWGRRQLVYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E P+L ++ +R++
Sbjct: 60 LCINIEASQAVMEEIEHAFKFNDAVLRHLTVVKKKAETGPSLMMRNVEREE 110
>gi|119776196|ref|YP_928936.1| 30S ribosomal protein S6 [Shewanella amazonensis SB2B]
gi|166227380|sp|A1SA60|RS6_SHEAM RecName: Full=30S ribosomal protein S6
gi|119768696|gb|ABM01267.1| SSU ribosomal protein S6P [Shewanella amazonensis SB2B]
Length = 135
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I + G++ + + G R +AY I+ KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGVITDANGKIHRLEDWGRRQLAYPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--RNDRFPR 118
V MN+ + ++ E++ R ++ VLRS+ + + + D D R R
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRSMVMRTKGAITEASPMAKAKDERDARRAAISER 119
Query: 119 DRNVDRKQHVSEEKPL 134
D + +EE
Sbjct: 120 SSEADEVEENAEESAE 135
>gi|120609915|ref|YP_969593.1| 30S ribosomal protein S6 [Acidovorax citrulli AAC00-1]
gi|326316062|ref|YP_004233734.1| 30S ribosomal protein S6 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|166226789|sp|A1TLI1|RS6_ACIAC RecName: Full=30S ribosomal protein S6
gi|120588379|gb|ABM31819.1| SSU ribosomal protein S6P [Acidovorax citrulli AAC00-1]
gi|323372898|gb|ADX45167.1| 30S ribosomal protein S6 [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 125
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG++ V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMITAGGGKIHRVEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E + ++ +R++
Sbjct: 60 LCVNIEADQAVMAELEHAFKFNDAVLRHLTVVKKKAETGASSMMKTVEREE 110
>gi|332971479|gb|EGK10430.1| 30S ribosomal protein S6 [Psychrobacter sp. 1501(2011)]
Length = 134
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S Q+ + +Y L+Q+N G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLIVHPD-QSDQVVGMVERYIKLVQDNNGMVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V NI A + E++ R ++ ++RSL + D P+ + + + R + PR
Sbjct: 60 VLFNIECDGATLEELEELFRYNDAIIRSLVVRRDDAITEPS-QLAKSADEKRARKAPRSE 118
Query: 121 N 121
N
Sbjct: 119 N 119
>gi|21231017|ref|NP_636934.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768978|ref|YP_243740.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. 8004]
gi|24212286|sp|Q8PAC2|RS6_XANCP RecName: Full=30S ribosomal protein S6
gi|81305058|sp|Q4UTA3|RS6_XANC8 RecName: Full=30S ribosomal protein S6
gi|21112641|gb|AAM40858.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574310|gb|AAY49720.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 144
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+ R
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVIKRDGPDTEQSLIMKS--KDEKGDKPERSER 119
Query: 122 VDRKQHVSEEKPLS 135
R + P +
Sbjct: 120 RRRDDEEGDAAPAA 133
>gi|197287186|ref|YP_002153058.1| 30S ribosomal protein S6 [Proteus mirabilis HI4320]
gi|227357120|ref|ZP_03841489.1| 30S ribosomal protein S6 [Proteus mirabilis ATCC 29906]
gi|226695115|sp|B4F275|RS6_PROMH RecName: Full=30S ribosomal protein S6
gi|194684673|emb|CAR46616.1| 30S ribosomal protein S6 [Proteus mirabilis HI4320]
gi|227162652|gb|EEI47619.1| 30S ribosomal protein S6 [Proteus mirabilis ATCC 29906]
Length = 131
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y++ I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYKTAITNANGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MN+ +P I E++ R ++ VLR++ + + ++ D R+
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVLRNMIMRTKHAVTEASPMVKAKDERRRD 112
>gi|170728537|ref|YP_001762563.1| 30S ribosomal protein S6 [Shewanella woodyi ATCC 51908]
gi|226695132|sp|B1KHZ0|RS6_SHEWM RecName: Full=30S ribosomal protein S6
gi|169813884|gb|ACA88468.1| ribosomal protein S6 [Shewanella woodyi ATCC 51908]
Length = 139
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + ++ E++ R ++ VLR++ + + + + D D +R
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRNMVMRTKAAITEASPMAKAKDERDSRRASEGER 119
Query: 121 NVDRKQHVSE 130
+ E
Sbjct: 120 RSAPAEATEE 129
>gi|77361359|ref|YP_340934.1| 30S ribosomal protein S6 [Pseudoalteromonas haloplanktis TAC125]
gi|91207933|sp|Q3IIA2|RS6_PSEHT RecName: Full=30S ribosomal protein S6
gi|76876270|emb|CAI87492.1| 30S ribosomal subunit protein S6 [Pseudoalteromonas haloplanktis
TAC125]
Length = 113
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVTGMIERYTGSITEAGGVIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MN+ +P I E++ R ++ VLR+L + + + ++ ++
Sbjct: 60 VLMNVEAPTEVISELETTFRYNDAVLRNLVMRTKNAVTEASPLVREEKKE 109
>gi|254525258|ref|ZP_05137313.1| 30S ribosomal protein S6 [Stenotrophomonas sp. SKA14]
gi|219722849|gb|EED41374.1| 30S ribosomal protein S6 [Stenotrophomonas sp. SKA14]
Length = 145
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ D S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEIVFMVHPD-QSEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
MNI + A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 62 LMNIEADQAVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDKP 114
>gi|167625581|ref|YP_001675875.1| 30S ribosomal protein S6 [Shewanella halifaxensis HAW-EB4]
gi|189045495|sp|B0TUU9|RS6_SHEHH RecName: Full=30S ribosomal protein S6
gi|167355603|gb|ABZ78216.1| ribosomal protein S6 [Shewanella halifaxensis HAW-EB4]
Length = 137
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDR 115
V +N+ + A+ E++ R ++ VLRS+ + + + + + +RD R
Sbjct: 60 VLLNVETTAEAVEELETAFRFNDAVLRSMVMRTKAAITEASPMAKAKDERDTRRSS 115
>gi|85708887|ref|ZP_01039953.1| ribosomal protein S6 [Erythrobacter sp. NAP1]
gi|85690421|gb|EAQ30424.1| ribosomal protein S6 [Erythrobacter sp. NAP1]
Length = 137
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 81/121 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQD+S Q+ +++ N G+V G++++AY+I +NRKA++
Sbjct: 17 MALYEHIFLARQDLSQAQVDALAATATEIVEANEGKVTKTETWGLKSLAYKIDRNRKAHF 76
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI +P + + E++R+ RI+E+V+R +T+ V+ HE+ P++ +++++RD + +R
Sbjct: 77 VMLNIDAPGSVVEELERQTRINEDVIRYMTIRVEEHEEGPSVMMRKNERDKKRRSDREER 136
Query: 121 N 121
+
Sbjct: 137 D 137
>gi|126208639|ref|YP_001053864.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae L20]
gi|166226794|sp|A3N1H3|RS6_ACTP2 RecName: Full=30S ribosomal protein S6
gi|126097431|gb|ABN74259.1| 30S ribosomal protein S6 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 124
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V MN+ +P I E++ R ++ VLR+L + + + ++ +
Sbjct: 60 VLMNVEAPQRVIDELETNFRYNDAVLRNLIVHTKAAVTEASPMVKAKE 107
>gi|17987763|ref|NP_540397.1| 30S ribosomal protein S6 [Brucella melitensis bv. 1 str. 16M]
gi|256044171|ref|ZP_05447078.1| 30S ribosomal protein S6 [Brucella melitensis bv. 1 str. Rev.1]
gi|260563529|ref|ZP_05834015.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. 16M]
gi|265990584|ref|ZP_06103141.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. Rev.1]
gi|24212309|sp|Q8YFP0|RS6_BRUME RecName: Full=30S ribosomal protein S6
gi|17983485|gb|AAL52661.1| ssu ribosomal protein s6p [Brucella melitensis bv. 1 str. 16M]
gi|260153545|gb|EEW88637.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. 16M]
gi|263001368|gb|EEZ13943.1| SSU ribosomal protein S6P [Brucella melitensis bv. 1 str. Rev.1]
Length = 148
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 50/104 (48%), Positives = 73/104 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ+ + Q++ +++ NGG+ V G+R + YRI+KNRKAYY
Sbjct: 1 MALYEHVLLARQDISQQQVDALVEQFKGVLEANGGKFGKVENWGLRPLTYRIKKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+NI +P AA+ EM+R+MRI+E+VL LT+ V+ HE+ + +
Sbjct: 61 TLVNIDAPAAAVAEMERQMRINEDVLSFLTVRVEEHEEGQSAML 104
>gi|87119508|ref|ZP_01075405.1| 30S ribosomal protein S6 [Marinomonas sp. MED121]
gi|86164984|gb|EAQ66252.1| 30S ribosomal protein S6 [Marinomonas sp. MED121]
Length = 135
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMVERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN-DRFPRD 119
V MNI + A + E+ R ++ ++R+L + + R+DR R R
Sbjct: 60 VLMNIEASEAVMSELNDTFRYNDAIIRNLVIRRKGAVTEVSPIKAAESREDRRAPREERQ 119
Query: 120 RNVDRKQHVSEE 131
+ + +EE
Sbjct: 120 ERTEAAETPAEE 131
>gi|103487384|ref|YP_616945.1| 30S ribosomal protein S6 [Sphingopyxis alaskensis RB2256]
gi|122984936|sp|Q1GRW0|RS6_SPHAL RecName: Full=30S ribosomal protein S6
gi|98977461|gb|ABF53612.1| SSU ribosomal protein S6P [Sphingopyxis alaskensis RB2256]
Length = 122
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 65/107 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVF+ RQD+S Q+ +I E G+V G++ +AY+I+KNRK +Y
Sbjct: 1 MPFYEHVFIARQDLSQAQVDALAETVTGVIGEYKGQVHKTETWGLKQLAYKIQKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V ++ AI E++R+ I+E+++R +T+ VD E+ P++ +++
Sbjct: 61 VMLSAEVSGEAIAEIERQAAINEDIIRWMTIKVDELEKGPSVMMRKQ 107
>gi|49474088|ref|YP_032130.1| 30S ribosomal protein S6 [Bartonella quintana str. Toulouse]
gi|61215537|sp|Q6G060|RS6_BARQU RecName: Full=30S ribosomal protein S6
gi|49239592|emb|CAF25949.1| 30s ribosomal protein s6 [Bartonella quintana str. Toulouse]
Length = 136
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 79/109 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQ+ + + Y+S+I+ +GG+V V G+R +AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQVDELLSLYKSVIEAHGGKVGRVENWGLRPLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI +P AI E++R+M I+E++LR +T+ V+ HE+ + R DR
Sbjct: 61 VLINIDAPATAIAEVERQMHINEDILRYMTVRVEKHEKEKSAMFSRLDR 109
>gi|126175838|ref|YP_001051987.1| 30S ribosomal protein S6 [Shewanella baltica OS155]
gi|152999250|ref|YP_001364931.1| 30S ribosomal protein S6 [Shewanella baltica OS185]
gi|160873863|ref|YP_001553179.1| 30S ribosomal protein S6 [Shewanella baltica OS195]
gi|217971923|ref|YP_002356674.1| 30S ribosomal protein S6 [Shewanella baltica OS223]
gi|304411186|ref|ZP_07392801.1| ribosomal protein S6 [Shewanella baltica OS183]
gi|307306481|ref|ZP_07586224.1| ribosomal protein S6 [Shewanella baltica BA175]
gi|166227381|sp|A3D8Q5|RS6_SHEB5 RecName: Full=30S ribosomal protein S6
gi|166227382|sp|A6WJ79|RS6_SHEB8 RecName: Full=30S ribosomal protein S6
gi|189045494|sp|A9L120|RS6_SHEB9 RecName: Full=30S ribosomal protein S6
gi|254765452|sp|B8E9N6|RS6_SHEB2 RecName: Full=30S ribosomal protein S6
gi|125999043|gb|ABN63118.1| SSU ribosomal protein S6P [Shewanella baltica OS155]
gi|151363868|gb|ABS06868.1| ribosomal protein S6 [Shewanella baltica OS185]
gi|160859385|gb|ABX47919.1| ribosomal protein S6 [Shewanella baltica OS195]
gi|217497058|gb|ACK45251.1| ribosomal protein S6 [Shewanella baltica OS223]
gi|304350379|gb|EFM14782.1| ribosomal protein S6 [Shewanella baltica OS183]
gi|306910772|gb|EFN41200.1| ribosomal protein S6 [Shewanella baltica BA175]
gi|315266090|gb|ADT92943.1| ribosomal protein S6 [Shewanella baltica OS678]
Length = 131
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E G + + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPILDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + I E++ R ++ VLR++ + + + D D R P
Sbjct: 60 VLMNVEAKAETIEELETAFRFNDAVLRNMVMRTKVAVTEASPMAKARDERDSR-RGPAGE 118
Query: 121 NVDRKQHVSE 130
+ H E
Sbjct: 119 RSYDEAHAEE 128
>gi|254294299|ref|YP_003060322.1| ribosomal protein S6 [Hirschia baltica ATCC 49814]
gi|254042830|gb|ACT59625.1| ribosomal protein S6 [Hirschia baltica ATCC 49814]
Length = 134
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 68/105 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + R D+S QQ++ + + +++ E G V G+R +AY I K+RK +Y
Sbjct: 1 MAFYEHVVISRPDVSPQQVETLVEELTAIVTEKEGTVAKTEYWGLRNLAYPINKSRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+NI +PPAAIHE++R++RI+E+V+R LT+ V+ + P+ +
Sbjct: 61 SLLNIDAPPAAIHEIERRLRINEDVIRFLTIKVEELSEEPSPVLS 105
>gi|323136067|ref|ZP_08071150.1| ribosomal protein S6 [Methylocystis sp. ATCC 49242]
gi|322399158|gb|EFY01677.1| ribosomal protein S6 [Methylocystis sp. ATCC 49242]
Length = 139
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV+L RQDIS QQ++ GQ++++I GG V G++++AYRI+KNRKA++
Sbjct: 1 MPLYEHVYLARQDISPQQVEALTGQFKNIITSLGGTVGKTEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +PPAAI EM+R+ I+E+VLR LTL V+ E+ P+ +++
Sbjct: 61 TLLNIDAPPAAIAEMERQQSINEDVLRVLTLRVEELEEGPSAQLRK 106
>gi|163749303|ref|ZP_02156552.1| 30S ribosomal protein S6 [Shewanella benthica KT99]
gi|161331022|gb|EDQ01948.1| 30S ribosomal protein S6 [Shewanella benthica KT99]
Length = 140
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG+V + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQVHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRD 119
V MN+ + +I E++ R+++ VLRS+ + + + + + +RD R
Sbjct: 60 VLMNVETTAESIEELETVFRLNDAVLRSMVMRTKAAITEASPMAKLKEERDSRRSSEGER 119
Query: 120 RNVDRKQHVSEEK 132
R+ ++ V E K
Sbjct: 120 RSAPVEKAVEEVK 132
>gi|261867096|ref|YP_003255018.1| 30S ribosomal protein S6 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293390735|ref|ZP_06635069.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261412428|gb|ACX81799.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951269|gb|EFE01388.1| ribosomal protein S6 [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 125
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E+++ R ++ VLRSL + + ++ D +
Sbjct: 60 VLMNVEAPQQVIDELEKTFRYNDAVLRSLVIHTKHAVTEASPMVKAKDDRKALTEVESND 119
Query: 121 NVDRKQ 126
D ++
Sbjct: 120 FEDAEE 125
>gi|188992092|ref|YP_001904102.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris
str. B100]
gi|226705647|sp|B0RUY9|RS6_XANCB RecName: Full=30S ribosomal protein S6
gi|167733852|emb|CAP52058.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. campestris]
Length = 144
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+ R
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVIKRDGPDTEQSLIMKS--KDEKGDKPERSER 119
Query: 122 VDRKQHVSEEKPLS 135
R + P +
Sbjct: 120 RRRDDEEVDAAPAA 133
>gi|319941488|ref|ZP_08015816.1| 30S ribosomal protein S6 [Sutterella wadsworthensis 3_1_45B]
gi|319805108|gb|EFW01938.1| 30S ribosomal protein S6 [Sutterella wadsworthensis 3_1_45B]
Length = 128
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S+Q+ I +Y++L+ E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEICIVVHPD-QSEQVPAMIERYKTLVAEQGGKIHRIEDWGRRPLAYPIEKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI I E++ R ++ VLR LT+ E +P+ ++ ++
Sbjct: 60 VLLNIECGHETILEIENGFRFNDAVLRHLTVKTKHAETAPSPMMKVIEK 108
>gi|154247047|ref|YP_001418005.1| 30S ribosomal protein S6 [Xanthobacter autotrophicus Py2]
gi|226705649|sp|A7IK05|RS6_XANP2 RecName: Full=30S ribosomal protein S6
gi|154161132|gb|ABS68348.1| ribosomal protein S6 [Xanthobacter autotrophicus Py2]
Length = 152
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD+++QQ+++ +++ +I+ NGG V G++++ YRI KNRKA++
Sbjct: 1 MPLYEHVFLARQDVTAQQVEELTTRFKGVIEANGGSVGKTEYWGVKSLTYRINKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P AAI E++R+ RIDE+VLR LTL V+ HE+ P+ +Q+
Sbjct: 61 TLLNINAPAAAIQELERQQRIDEDVLRILTLRVEEHEEGPSAMLQK 106
>gi|84517317|ref|ZP_01004671.1| ribosomal protein S6 [Loktanella vestfoldensis SKA53]
gi|84508797|gb|EAQ05260.1| ribosomal protein S6 [Loktanella vestfoldensis SKA53]
Length = 133
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 74/109 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEALIEHFGTILADNGGKLLENEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ +P AI EM+R MR++E+V+R LT+ VD+HE P++ +Q+ +
Sbjct: 61 ALLRTDAPAPAIQEMERLMRLNEDVMRVLTIKVDAHEDGPSVQMQKREE 109
>gi|33152177|ref|NP_873530.1| 30S ribosomal protein S6 [Haemophilus ducreyi 35000HP]
gi|61215717|sp|Q7VMD7|RS6_HAEDU RecName: Full=30S ribosomal protein S6
gi|33148399|gb|AAP95919.1| 30S ribosomal protein S6 [Haemophilus ducreyi 35000HP]
Length = 124
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + + E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTASVTEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V MN+ +P + I E++ R ++ VLR+L + + + +L + +
Sbjct: 60 VLMNVEAPKSVIDELETNFRYNDAVLRNLIVHTKAAVKEASLMAKAKE 107
>gi|91788897|ref|YP_549849.1| 30S ribosomal protein S6 [Polaromonas sp. JS666]
gi|123164720|sp|Q128U1|RS6_POLSJ RecName: Full=30S ribosomal protein S6
gi|91698122|gb|ABE44951.1| SSU ribosomal protein S6P [Polaromonas sp. JS666]
Length = 121
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y+ +I GG+V V + G R + Y I+K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQLVYLIQKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT++ E P+L ++ +R++
Sbjct: 60 LCINIEASQAVMEEIEHAFKFNDAVLRHLTVVKKKAETGPSLMMRNVEREE 110
>gi|126728810|ref|ZP_01744625.1| Ribosomal protein S6 [Sagittula stellata E-37]
gi|126710740|gb|EBA09791.1| Ribosomal protein S6 [Sagittula stellata E-37]
Length = 120
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/107 (39%), Positives = 76/107 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + + + +++++NGG V G++T+A++I KNRK +Y
Sbjct: 1 MPLYEHVFISRQDLSNAQAEGLVEHFSTVLKDNGGNVIESEYWGVKTMAFKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
++ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q+
Sbjct: 61 AYLRTDAPSSAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMQKK 107
>gi|323142970|ref|ZP_08077678.1| ribosomal protein S6 [Succinatimonas hippei YIT 12066]
gi|322417243|gb|EFY07869.1| ribosomal protein S6 [Succinatimonas hippei YIT 12066]
Length = 139
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y+ I++ GG++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSDQVPGMIERYKGEIEKTGGKIHRLEDWGRRQLAYPIQKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + AI ++ R ++ V+R+L + + + ++ R +R R+
Sbjct: 60 VLMNVEAEQEAIDSIENNFRFNDAVIRNLVIRTNGPVTEQSPMMKA-----REERRARED 114
Query: 121 NVDRKQH 127
+ +++QH
Sbjct: 115 DGEQRQH 121
>gi|254477083|ref|ZP_05090469.1| ribosomal protein S6 [Ruegeria sp. R11]
gi|214031326|gb|EEB72161.1| ribosomal protein S6 [Ruegeria sp. R11]
Length = 117
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AAI EM+R MR+ ++V+R LT+ VD+HE P++ +Q+
Sbjct: 61 SFLKTDASAAAIQEMERLMRLHDDVMRVLTIKVDAHEDGPSVQMQK 106
>gi|127514212|ref|YP_001095409.1| 30S ribosomal protein S6 [Shewanella loihica PV-4]
gi|166227383|sp|A3QI52|RS6_SHELP RecName: Full=30S ribosomal protein S6
gi|126639507|gb|ABO25150.1| SSU ribosomal protein S6P [Shewanella loihica PV-4]
Length = 135
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++ + GG++ + + G R +AY I + KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPR 118
V MN+ + ++ E++ R ++ VLRS+ + + + + +R+ R R
Sbjct: 60 VLMNVEATAESVEELETAFRFNDAVLRSMVMRTKGAITEASPMAKAKDEREARRSSEER 118
>gi|304319742|ref|YP_003853385.1| 30S ribosomal protein S6 [Parvularcula bermudensis HTCC2503]
gi|303298645|gb|ADM08244.1| ribosomal protein S6 [Parvularcula bermudensis HTCC2503]
Length = 110
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 76/110 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQDIS Q++ + Q++I+ENGGE+R G+R + Y+I KNRK +Y
Sbjct: 1 MPLYEHVFVARQDISPAQVEALTDELQTIIRENGGEIRKSEYWGLRNLQYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
MNI SP AI E++R+MRI E++LR +TL V+ H+ P+ + R DRD
Sbjct: 61 SLMNIDSPSEAIVELERQMRIKEDILRFMTLKVEEHDDEPSPVMSRRDRD 110
>gi|15603045|ref|NP_246117.1| 30S ribosomal protein S6 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13959508|sp|Q9CLN8|RS6_PASMU RecName: Full=30S ribosomal protein S6
gi|12721531|gb|AAK03264.1| RpS6 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 125
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + ++ D +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKAKDDRKALAEVENND 119
Query: 121 NVDRKQ 126
D ++
Sbjct: 120 FEDAEE 125
>gi|163736680|ref|ZP_02144099.1| 30S ribosomal protein S6 [Phaeobacter gallaeciensis BS107]
gi|163742693|ref|ZP_02150078.1| ribosomal protein S6 [Phaeobacter gallaeciensis 2.10]
gi|161383948|gb|EDQ08332.1| ribosomal protein S6 [Phaeobacter gallaeciensis 2.10]
gi|161390550|gb|EDQ14900.1| 30S ribosomal protein S6 [Phaeobacter gallaeciensis BS107]
Length = 117
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGSLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AAI EM+R MR+ ++V+R LT+ VD+HE P++ +Q+
Sbjct: 61 SFLKTDASAAAIQEMERLMRLHDDVMRVLTIKVDAHEDGPSVQMQK 106
>gi|289663136|ref|ZP_06484717.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669572|ref|ZP_06490647.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. musacearum
NCPPB4381]
gi|325915474|ref|ZP_08177788.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325917962|ref|ZP_08180131.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325535819|gb|EGD07646.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
gi|325538356|gb|EGD10038.1| SSU ribosomal protein S6P [Xanthomonas vesicatoria ATCC 35937]
Length = 143
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+ P
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK-PERSE 118
Query: 122 VDRKQHVSEEKPLS 135
R+ + P +
Sbjct: 119 RRRRDDEEGDAPAA 132
>gi|113461581|ref|YP_719650.1| 30S ribosomal protein S6 [Haemophilus somnus 129PT]
gi|123132186|sp|Q0I4E5|RS6_HAES1 RecName: Full=30S ribosomal protein S6
gi|112823624|gb|ABI25713.1| SSU ribosomal protein S6P [Haemophilus somnus 129PT]
Length = 125
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y S I+E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTSSIKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + ++ R +R P
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKA-----REERKPLTE 114
Query: 121 NVDRKQHVSEE 131
+ +EE
Sbjct: 115 VENNDFEDAEE 125
>gi|170718757|ref|YP_001783942.1| 30S ribosomal protein S6 [Haemophilus somnus 2336]
gi|189045472|sp|B0US43|RS6_HAES2 RecName: Full=30S ribosomal protein S6
gi|168826886|gb|ACA32257.1| ribosomal protein S6 [Haemophilus somnus 2336]
Length = 125
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + ++ R +R P
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKA-----REERKPLTE 114
Query: 121 NVDRKQHVSEE 131
+ +EE
Sbjct: 115 VENNDFEDAEE 125
>gi|149907735|ref|ZP_01896482.1| 30S ribosomal protein S6 [Moritella sp. PE36]
gi|149809405|gb|EDM69334.1| 30S ribosomal protein S6 [Moritella sp. PE36]
Length = 124
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +++ E G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYSAVVTEANGTIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MNI + I E++ R ++ V+RS+ L + + +
Sbjct: 60 VLMNIEAGQDVIDELENNFRFNDAVIRSMFLRTKGVVTEASPMAKAKEERR 110
>gi|260219662|emb|CBA26507.1| 30S ribosomal protein S6 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 121
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ +I GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMITAGGGKVHRVEDWGRRQMVYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E P+ ++ +R+D
Sbjct: 60 LCVNIEADQAVMSELEHAFKFNDAVLRHLTVSKKKAETGPSSMMKTVERED 110
>gi|166711572|ref|ZP_02242779.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 143
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDKP 114
>gi|52424524|ref|YP_087661.1| 30S ribosomal protein S6 [Mannheimia succiniciproducens MBEL55E]
gi|61215479|sp|Q65VD4|RS6_MANSM RecName: Full=30S ribosomal protein S6
gi|52306576|gb|AAU37076.1| RpsF protein [Mannheimia succiniciproducens MBEL55E]
Length = 125
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLR++ + + ++ D + +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKAKDERRASAEVENND 119
Query: 121 NVDRKQ 126
D ++
Sbjct: 120 FEDAEE 125
>gi|21242370|ref|NP_641952.1| 30S ribosomal protein S6 [Xanthomonas axonopodis pv. citri str.
306]
gi|78047217|ref|YP_363392.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294626363|ref|ZP_06704965.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665955|ref|ZP_06731219.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325928162|ref|ZP_08189371.1| SSU ribosomal protein S6P [Xanthomonas perforans 91-118]
gi|24212288|sp|Q8PM14|RS6_XANAC RecName: Full=30S ribosomal protein S6
gi|91207801|sp|Q3BV21|RS6_XANC5 RecName: Full=30S ribosomal protein S6
gi|21107807|gb|AAM36488.1| 30S ribosomal protein S6 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035647|emb|CAJ23338.1| 30S ribosomal protein S6 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292599364|gb|EFF43499.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292604258|gb|EFF47645.1| 30S ribosomal protein S6 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325541458|gb|EGD12991.1| SSU ribosomal protein S6P [Xanthomonas perforans 91-118]
Length = 143
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVVKRDGADTEQSLIMKS--KDEKGDKP 114
>gi|264677149|ref|YP_003277055.1| ribosomal protein S6 [Comamonas testosteroni CNB-2]
gi|299530693|ref|ZP_07044108.1| 30S ribosomal protein S6 [Comamonas testosteroni S44]
gi|262207661|gb|ACY31759.1| ribosomal protein S6 [Comamonas testosteroni CNB-2]
gi|298721209|gb|EFI62151.1| 30S ribosomal protein S6 [Comamonas testosteroni S44]
Length = 120
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ E + + ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKAETAASAMMKSVEREE 110
>gi|78485708|ref|YP_391633.1| ribosomal protein S6 [Thiomicrospira crunogena XCL-2]
gi|91207798|sp|Q31FW4|RS6_THICR RecName: Full=30S ribosomal protein S6
gi|78363994|gb|ABB41959.1| SSU ribosomal protein S6P [Thiomicrospira crunogena XCL-2]
Length = 114
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ENGG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYRGLIEENGGAIHRLEDWGRRQLAYLINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ MNI + E++ ++ VLR + + + P++ + + R D+
Sbjct: 60 ILMNIECDQETLKELENLFYYNDAVLRDMFIKRNEAVTEPSVMASQKEDKRRGDK 114
>gi|89054113|ref|YP_509564.1| 30S ribosomal protein S6 [Jannaschia sp. CCS1]
gi|122498966|sp|Q28RX3|RS6_JANSC RecName: Full=30S ribosomal protein S6
gi|88863662|gb|ABD54539.1| SSU ribosomal protein S6P [Jannaschia sp. CCS1]
Length = 117
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + +++ +NGG V G++T+AY+I KNRK +Y
Sbjct: 1 MALYEHVMIARQDLSNAQAEALNEHFGAVLADNGGTVVDTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
++ +P A+ EM+R MR+ ++V+R LT+ VD+H++ P++ +Q+
Sbjct: 61 SYLRTDAPSDAVQEMERLMRLHDDVMRVLTIKVDAHDEGPSVQMQK 106
>gi|221068654|ref|ZP_03544759.1| ribosomal protein S6 [Comamonas testosteroni KF-1]
gi|220713677|gb|EED69045.1| ribosomal protein S6 [Comamonas testosteroni KF-1]
Length = 120
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S+Q+ + +Y+ +I GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPD-QSEQVPAMLERYKGMIAAGGGKVHREEDWGRRQLAYMINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + ++ VLR LT+ + + + ++ +R++
Sbjct: 60 LCLNIEADQAVMAELEHAFKFNDAVLRHLTVQKKKADTAASAMMKSVEREE 110
>gi|296444435|ref|ZP_06886400.1| ribosomal protein S6 [Methylosinus trichosporium OB3b]
gi|296258082|gb|EFH05144.1| ribosomal protein S6 [Methylosinus trichosporium OB3b]
Length = 146
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 48/106 (45%), Positives = 78/106 (73%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH++L RQDIS QQ++ GQ++++I GG+V G++++AYRI+KNRKA++
Sbjct: 1 MALYEHIYLARQDISPQQVEALTGQFKTIIASLGGKVSKTEYWGVKSLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +PPAA+ E++R+ + E+VLR LTL VD+ E+ P+ +++
Sbjct: 61 TLLNIEAPPAALAEVERQQGLSEDVLRFLTLRVDALEEGPSAQLRK 106
>gi|254464513|ref|ZP_05077924.1| ribosomal protein S6 [Rhodobacterales bacterium Y4I]
gi|206685421|gb|EDZ45903.1| ribosomal protein S6 [Rhodobacterales bacterium Y4I]
Length = 117
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPASAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|16272491|ref|NP_438705.1| 30S ribosomal protein S6 [Haemophilus influenzae Rd KW20]
gi|68249144|ref|YP_248256.1| 30S ribosomal protein S6 [Haemophilus influenzae 86-028NP]
gi|145628928|ref|ZP_01784728.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.1-21]
gi|145630272|ref|ZP_01786053.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|145633501|ref|ZP_01789230.1| 30S ribosomal protein S6 [Haemophilus influenzae 3655]
gi|145635372|ref|ZP_01791074.1| 30S ribosomal protein S6 [Haemophilus influenzae PittAA]
gi|145637412|ref|ZP_01793071.1| 30S ribosomal protein S6 [Haemophilus influenzae PittHH]
gi|145638543|ref|ZP_01794152.1| 30S ribosomal protein S6 [Haemophilus influenzae PittII]
gi|145640520|ref|ZP_01796104.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|148827738|ref|YP_001292491.1| 30S ribosomal protein S6 [Haemophilus influenzae PittGG]
gi|229844294|ref|ZP_04464434.1| 30S ribosomal protein S6 [Haemophilus influenzae 6P18H1]
gi|229846630|ref|ZP_04466738.1| 30S ribosomal protein S6 [Haemophilus influenzae 7P49H1]
gi|260580994|ref|ZP_05848817.1| ribosomal protein S6 [Haemophilus influenzae RdAW]
gi|260582749|ref|ZP_05850536.1| ribosomal protein S6 [Haemophilus influenzae NT127]
gi|319775532|ref|YP_004138020.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3047]
gi|319897936|ref|YP_004136133.1| 30S ribosomal subunit protein s6 [Haemophilus influenzae F3031]
gi|325579202|ref|ZP_08149158.1| 30S ribosomal protein S6 [Haemophilus parainfluenzae ATCC 33392]
gi|329122425|ref|ZP_08251012.1| 30S ribosomal protein S6 [Haemophilus aegyptius ATCC 11116]
gi|1173270|sp|P44375|RS6_HAEIN RecName: Full=30S ribosomal protein S6
gi|81336449|sp|Q4QN01|RS6_HAEI8 RecName: Full=30S ribosomal protein S6
gi|166226970|sp|A5UH52|RS6_HAEIG RecName: Full=30S ribosomal protein S6
gi|1573532|gb|AAC22205.1| ribosomal protein S6 (rpS6) [Haemophilus influenzae Rd KW20]
gi|68057343|gb|AAX87596.1| 30S ribosomal protein S6 [Haemophilus influenzae 86-028NP]
gi|144979398|gb|EDJ89084.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.1-21]
gi|144984007|gb|EDJ91444.1| 30S ribosomal protein S6 [Haemophilus influenzae R3021]
gi|144985870|gb|EDJ92478.1| 30S ribosomal protein S6 [Haemophilus influenzae 3655]
gi|145267378|gb|EDK07380.1| 30S ribosomal protein S6 [Haemophilus influenzae PittAA]
gi|145269358|gb|EDK09302.1| 30S ribosomal protein S6 [Haemophilus influenzae PittHH]
gi|145272138|gb|EDK12046.1| 30S ribosomal protein S6 [Haemophilus influenzae PittII]
gi|145275106|gb|EDK14968.1| 30S ribosomal protein S6 [Haemophilus influenzae 22.4-21]
gi|148718980|gb|ABR00108.1| 30S ribosomal protein S6 [Haemophilus influenzae PittGG]
gi|229810723|gb|EEP46441.1| 30S ribosomal protein S6 [Haemophilus influenzae 7P49H1]
gi|229812543|gb|EEP48232.1| 30S ribosomal protein S6 [Haemophilus influenzae 6P18H1]
gi|260092353|gb|EEW76293.1| ribosomal protein S6 [Haemophilus influenzae RdAW]
gi|260094199|gb|EEW78100.1| ribosomal protein S6 [Haemophilus influenzae NT127]
gi|301155577|emb|CBW15045.1| 30S ribosomal subunit protein S6 [Haemophilus parainfluenzae T3T1]
gi|301169262|emb|CBW28859.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae 10810]
gi|309750047|gb|ADO80031.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae R2866]
gi|309972302|gb|ADO95503.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae R2846]
gi|317433442|emb|CBY81825.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3031]
gi|317450123|emb|CBY86337.1| 30S ribosomal subunit protein S6 [Haemophilus influenzae F3047]
gi|325159437|gb|EGC71571.1| 30S ribosomal protein S6 [Haemophilus parainfluenzae ATCC 33392]
gi|327473707|gb|EGF19126.1| 30S ribosomal protein S6 [Haemophilus aegyptius ATCC 11116]
Length = 125
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ VLRSL + + + + +R P
Sbjct: 60 VLMNVEAPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASPM-----KAAKEERKPLAE 114
Query: 121 NVDRKQHVSEE 131
+ +EE
Sbjct: 115 VENNDFEDAEE 125
>gi|194366362|ref|YP_002028972.1| 30S ribosomal protein S6 [Stenotrophomonas maltophilia R551-3]
gi|226695133|sp|B4SP94|RS6_STRM5 RecName: Full=30S ribosomal protein S6
gi|194349166|gb|ACF52289.1| ribosomal protein S6 [Stenotrophomonas maltophilia R551-3]
Length = 145
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ D S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEIVFMVHPD-QSEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+NI + A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 62 LLNIEADQAVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDKP 114
>gi|58582039|ref|YP_201055.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623951|ref|YP_451323.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188576348|ref|YP_001913277.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|75435315|sp|Q5H051|RS6_XANOR RecName: Full=30S ribosomal protein S6
gi|91207802|sp|Q2P328|RS6_XANOM RecName: Full=30S ribosomal protein S6
gi|226705648|sp|B2SIV0|RS6_XANOP RecName: Full=30S ribosomal protein S6
gi|58426633|gb|AAW75670.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367891|dbj|BAE69049.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520800|gb|ACD58745.1| 30S ribosomal protein S6 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 143
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SLI+ G + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEVVFLVHPD-QSEQVPAMIERYKSLIEGGNGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 62 LLNIEVDQAVLSELVESFRFNDAVLRHLVVKRDGPDTEQSLIMKS--KDEKGDK 113
>gi|332289562|ref|YP_004420414.1| 30S ribosomal protein S6 [Gallibacterium anatis UMN179]
gi|330432458|gb|AEC17517.1| 30S ribosomal protein S6 [Gallibacterium anatis UMN179]
Length = 125
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ +P I E++ R ++ +LR++ + + ++ D +
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAILRNVIIRTKHAVTEASPMVKAKDERKALADVDNND 119
Query: 121 NVDRKQ 126
D ++
Sbjct: 120 YEDAEE 125
>gi|119474661|ref|ZP_01615014.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2143]
gi|119450864|gb|EAW32097.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2143]
Length = 145
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y I++NGG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVPGMVERYTQAIEKNGGKIHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE--QSPTLTIQRHDRDDRNDRFPR 118
MN+ + AI E+ R ++ VLR+L + +D +SP + ++ R+ R R R
Sbjct: 60 TLMNVEADQEAIDELTTNFRYNDAVLRNLVIKMDESVTAESPIMKAEKESRERRASRPER 119
Query: 119 DR 120
Sbjct: 120 RD 121
>gi|16125915|ref|NP_420479.1| 30S ribosomal protein S6 [Caulobacter crescentus CB15]
gi|221234678|ref|YP_002517114.1| 30S ribosomal protein S6 [Caulobacter crescentus NA1000]
gi|24212335|sp|Q9A7Q1|RS6_CAUCR RecName: Full=30S ribosomal protein S6
gi|254765228|sp|B8GVN6|RS6_CAUCN RecName: Full=30S ribosomal protein S6
gi|13423077|gb|AAK23647.1| ribosomal protein S6 [Caulobacter crescentus CB15]
gi|220963850|gb|ACL95206.1| SSU ribosomal protein S6P [Caulobacter crescentus NA1000]
Length = 126
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 76/126 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++LI+ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALIEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ I +P A+ EM+R++ I+E+VLR +T+ V+ + + + R DR DR +R D
Sbjct: 61 SLLAIDAPAPAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDRGDRPERPREDF 120
Query: 121 NVDRKQ 126
+
Sbjct: 121 GAQAQA 126
>gi|258546024|ref|ZP_05706258.1| 30S ribosomal protein S6 [Cardiobacterium hominis ATCC 15826]
gi|258518753|gb|EEV87612.1| 30S ribosomal protein S6 [Cardiobacterium hominis ATCC 15826]
Length = 110
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ +Y+ +++ G+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVNAMSERYRGIVEAAKGKVHRFEDWGRRVLAYPINKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MNI A + E++ R ++ +LR LT+ D + ++
Sbjct: 60 VMMNIECDAATLAELENNFRFNDAILRHLTIRRDEAVTEASPMADSKKKE 109
>gi|149377617|ref|ZP_01895355.1| ribosomal protein S6 [Marinobacter algicola DG893]
gi|149358090|gb|EDM46574.1| ribosomal protein S6 [Marinobacter algicola DG893]
Length = 138
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIERYTGVITEDGGKVHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V MNI AA+ E+ R ++ ++R + L D + + R+
Sbjct: 60 VLMNIECSQAAMDELTHNFRFNDAIIRDMILRRDGADVDLSPMKASESRE 109
>gi|85707089|ref|ZP_01038177.1| ribosomal protein S6 [Roseovarius sp. 217]
gi|85668375|gb|EAQ23248.1| ribosomal protein S6 [Roseovarius sp. 217]
Length = 150
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 75/110 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+SS Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSSAQAEGLIEHFGAVLTDNGGTLVEHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
F+ +P +A+ EM+R MR+ ++V+R LT+ VD+HE+ P++ +Q+ D
Sbjct: 61 AFLKTDAPSSAVQEMERLMRLHDDVMRVLTIKVDAHEEGPSVQMQKRDER 110
>gi|285018510|ref|YP_003376221.1| 30s ribosomal subunit protein s6 [Xanthomonas albilineans GPE PC73]
gi|283473728|emb|CBA16231.1| probable 30s ribosomal subunit protein s6 [Xanthomonas albilineans]
Length = 144
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VFL+ D S+Q+ I +Y+SL++ GG + + + G R +AY I+ KA+YV
Sbjct: 3 RHYEIVFLVHPD-QSEQVPAMIERYKSLVENGGGTIHRLEDWGRRQLAYPIQNLVKAHYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+NI A + E+ R ++ VLR L + D + +L ++ +D++ D+
Sbjct: 62 MLNIEVDQAVLSELVESFRFNDAVLRHLAIKRDGADTEQSLIMKS--KDEKGDKP 114
>gi|104783860|ref|YP_610358.1| 30S ribosomal protein S6 [Pseudomonas entomophila L48]
gi|122401638|sp|Q1I461|RS6_PSEE4 RecName: Full=30S ribosomal protein S6
gi|95112847|emb|CAK17575.1| 30S ribosomal protein S6 [Pseudomonas entomophila L48]
Length = 141
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D P+ ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGPSEMLK 104
>gi|56697142|ref|YP_167505.1| 30S ribosomal protein S6 [Ruegeria pomeroyi DSS-3]
gi|81349630|sp|Q5LR50|RS6_SILPO RecName: Full=30S ribosomal protein S6
gi|56678879|gb|AAV95545.1| ribosomal protein S6 [Ruegeria pomeroyi DSS-3]
Length = 117
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGAVLSDNGGSLVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPASAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|209885492|ref|YP_002289349.1| 30S ribosomal protein S6 (RRP-S6) [Oligotropha carboxidovorans OM5]
gi|226695108|sp|B6JGN7|RS6_OLICO RecName: Full=30S ribosomal protein S6
gi|209873688|gb|ACI93484.1| 30S ribosomal protein S6 (RRP-S6) [Oligotropha carboxidovorans OM5]
Length = 144
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 13/144 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YRI+KNRKA++
Sbjct: 1 MPYYEHVFLARQDASAQQVEELTTQITGVIEGLGGKVTKTESWGVRSLTYRIQKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--------- 111
V +NI P + E++R+ RI+E+++R LT+ VD E+ P+ +++ DRD
Sbjct: 61 VLLNIDGPATIVAEVERQERINEDIIRYLTVRVDELEEGPSAMMRKADRDRERDERGGPR 120
Query: 112 ----RNDRFPRDRNVDRKQHVSEE 131
R++R PR + EE
Sbjct: 121 EGGFRSERGPRRPREEETTASVEE 144
>gi|152978439|ref|YP_001344068.1| 30S ribosomal protein S6 [Actinobacillus succinogenes 130Z]
gi|189045452|sp|A6VMD6|RS6_ACTSZ RecName: Full=30S ribosomal protein S6
gi|150840162|gb|ABR74133.1| ribosomal protein S6 [Actinobacillus succinogenes 130Z]
Length = 126
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V MN+ +P I E++ R ++ VLR++ + + + D
Sbjct: 60 VLMNVEAPQEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMAKAKDERK 110
>gi|295689695|ref|YP_003593388.1| 30S ribosomal protein S6 [Caulobacter segnis ATCC 21756]
gi|295431598|gb|ADG10770.1| ribosomal protein S6 [Caulobacter segnis ATCC 21756]
Length = 124
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 75/119 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++LI+ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALIEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+ I +P A+ EM+R++ I+E+VLR +T+ V+ + + + R DR DR +R D
Sbjct: 61 SLLAIDAPAPAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDRGDRPERPRED 119
>gi|84503440|ref|ZP_01001500.1| Ribosomal protein S6 [Oceanicola batsensis HTCC2597]
gi|84388227|gb|EAQ01179.1| Ribosomal protein S6 [Oceanicola batsensis HTCC2597]
Length = 118
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 42/107 (39%), Positives = 73/107 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVFIARQDLSNAQAEGLIEHFGTVLSDNGGKLVEQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
F+ +P A+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLKSDAPAPAVQEMERLMRLHDDVMRVLTIRVEEHAEGPSIQMQKK 107
>gi|288941716|ref|YP_003443956.1| 30S ribosomal protein S6 [Allochromatium vinosum DSM 180]
gi|288897088|gb|ADC62924.1| ribosomal protein S6 [Allochromatium vinosum DSM 180]
Length = 130
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ S+Q+ I +YQ +++ GG V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFLVHPS-QSEQVPGMIERYQGSLEKRGGVVHRCEDWGRRPLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ AI E+ R ++ VLR+L + D+ P+ +
Sbjct: 60 VLMNVECDQEAIDELANAFRFNDVVLRNLIIQRDAAVTEPSPLAK 104
>gi|144899045|emb|CAM75909.1| 30S ribosomal protein S6 [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 15/142 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V L RQ++S+ Q++ I + ++ + GG V G+R IAYR++KNRKA+Y
Sbjct: 1 MPFYECVILARQEVSAPQVETLIDEMAGVLAQGGGTVAKKEFWGLRNIAYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
V +N+ SP AA+ EM+R+M ++E+VLR LT+ VD E+ P+ +Q
Sbjct: 61 VLLNLDSPSAAVKEMERQMSLNEDVLRVLTVRVDELEEGPSAMMQAKNSRDERPRREDRG 120
Query: 107 -HDRDDRNDRFPRDRNVDRKQH 127
DR R DR PR+ R +
Sbjct: 121 FGDRGPREDRGPREDRPRRSEG 142
>gi|56461040|ref|YP_156321.1| 30S ribosomal protein S6 [Idiomarina loihiensis L2TR]
gi|61215392|sp|Q5QY01|RS6_IDILO RecName: Full=30S ribosomal protein S6
gi|56180050|gb|AAV82772.1| Ribosomal protein S6 [Idiomarina loihiensis L2TR]
Length = 116
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I++ GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSETIKQGGGQIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
V +NI + + E++ R ++ VLR++ + P+ + +
Sbjct: 60 VLLNIEASAEVVEELETAFRYNDAVLRNMIMRKKESITEPSPLTKPKEDRK 110
>gi|126735965|ref|ZP_01751709.1| ribosomal protein S6 [Roseobacter sp. CCS2]
gi|126714522|gb|EBA11389.1| ribosomal protein S6 [Roseobacter sp. CCS2]
Length = 117
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAESLIEHFGTVLADNGGKLLENEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
FM +P AI EM+R MR+ E+V+R LT+ VD+H++ P++ +Q+
Sbjct: 61 AFMRTDAPAPAIQEMERLMRLHEDVMRVLTIKVDAHQEGPSVQMQK 106
>gi|115525311|ref|YP_782222.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisA53]
gi|122295615|sp|Q07LE2|RS6_RHOP5 RecName: Full=30S ribosomal protein S6
gi|115519258|gb|ABJ07242.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisA53]
Length = 157
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V + G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVVKMEAWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+V+R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPSAVVAEVERQERINEDVIRYLTVRVDEHEEGPSAMMRK 106
>gi|294677547|ref|YP_003578162.1| 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
gi|7388214|sp|O68126|RS6_RHOCA RecName: Full=30S ribosomal protein S6
gi|3128364|gb|AAC16216.1| potential 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
gi|294476367|gb|ADE85755.1| 30S ribosomal protein S6 [Rhodobacter capsulatus SB 1003]
Length = 144
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + ++I +NGG+V G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVLIARQDLSNAQAEGLIEHFSTVIGDNGGKVLGTEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AA+ EM+R R+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 GFLRTDAPSAAVQEMERLARLHDDVMRVLTIKVDGHDEGPSVQMQK 106
>gi|326796492|ref|YP_004314312.1| 30S ribosomal protein S6 [Marinomonas mediterranea MMB-1]
gi|326547256|gb|ADZ92476.1| 30S ribosomal protein S6 [Marinomonas mediterranea MMB-1]
Length = 135
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y +LI E+GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPAMIERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V MNI + A + E+ R ++ ++R++ + + R+DR +
Sbjct: 60 VLMNIEASEAVLAELNDTFRYNDAIIRNMVIRRKDAVTEVSPIKAAESREDRRPQREER 118
>gi|256821794|ref|YP_003145757.1| 30S ribosomal protein S6 [Kangiella koreensis DSM 16069]
gi|256795333|gb|ACV25989.1| ribosomal protein S6 [Kangiella koreensis DSM 16069]
Length = 134
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y +I + G V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSDQVPGMIERYTKMITDGAGTVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V MN+ + I E++ R ++ +LR++ + E SP ++ +RD++ R
Sbjct: 60 VLMNVETTGEIIEELEDAFRFNDAILRNMVMRRKEAVTEASPMAAAKKDERDEKPRREAE 119
>gi|86749584|ref|YP_486080.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris HaA2]
gi|123098719|sp|Q2IX91|RS6_RHOP2 RecName: Full=30S ribosomal protein S6
gi|86572612|gb|ABD07169.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris HaA2]
Length = 159
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVTKTEAWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+++R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPSAVVSEIERQERINEDIVRYLTVRVDEHEEGPSAMMRK 106
>gi|148825179|ref|YP_001289932.1| 30S ribosomal protein S6 [Haemophilus influenzae PittEE]
gi|166226969|sp|A5U9U8|RS6_HAEIE RecName: Full=30S ribosomal protein S6
gi|148715339|gb|ABQ97549.1| 30S ribosomal protein S6 [Haemophilus influenzae PittEE]
Length = 125
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ P I E++ R ++ VLRSL + + + + +R P
Sbjct: 60 VLMNVEVPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASPM-----KAAKEERKPLAE 114
Query: 121 NVDRKQHVSEE 131
+ +EE
Sbjct: 115 VENNDFEDAEE 125
>gi|197105009|ref|YP_002130386.1| ribosomal protein S6 [Phenylobacterium zucineum HLK1]
gi|196478429|gb|ACG77957.1| ribosomal protein S6 [Phenylobacterium zucineum HLK1]
Length = 222
Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 67/105 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQDIS QQ + Q ++LI++ GG V + G+R + YRI+KNRK +Y
Sbjct: 103 MALYEHVVISRQDISPQQAEALNDQLKALIEQGGGSVAKIEYWGLRNLTYRIKKNRKGHY 162
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ I +P A+ EM+R++ I+E+VLR +T+ VD + + +
Sbjct: 163 SLLAIDAPADAVKEMERQLSINEDVLRYMTVRVDELDLELSPILA 207
>gi|224510727|pdb|3FIH|F Chain F, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|251837144|pdb|3IY8|F Chain F, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
gi|294662222|pdb|2WWL|F Chain F, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387970|pdb|3OFO|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308387991|pdb|3OFP|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320028|pdb|3OFA|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320049|pdb|3OFB|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320132|pdb|3OFX|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320153|pdb|3OFY|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113617|pdb|3OAQ|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|315113638|pdb|3OAR|F Chain F, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
Length = 100
Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
V MN+ +P I E++ R ++ V+RS+ + +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEAS 100
>gi|319404043|emb|CBI77631.1| 30S ribosomal protein S6 (fragment) [Bartonella rochalimae ATCC
BAA-1498]
Length = 96
Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/96 (52%), Positives = 73/96 (76%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+FL RQDI+ QQI + + Y+ +I+ NGG+V V G+R++AYRIRKNRKAYY
Sbjct: 1 MALYEHIFLARQDIAPQQIDELLETYKGVIEANGGKVGRVENWGLRSLAYRIRKNRKAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +NI +P + I E++R+MRI+E++LR +T+ V+
Sbjct: 61 VLINIDAPASTIAELERQMRINEDILRYMTVRVEKQ 96
>gi|92117878|ref|YP_577607.1| 30S ribosomal protein S6 [Nitrobacter hamburgensis X14]
gi|122417598|sp|Q1QKV0|RS6_NITHX RecName: Full=30S ribosomal protein S6
gi|91800772|gb|ABE63147.1| SSU ribosomal protein S6P [Nitrobacter hamburgensis X14]
Length = 147
Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 9/143 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q +I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTNQITGVITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--------- 111
V +NI P A + E++R+ RI E+V+R L++ V+ HE+ P+ +++ DRD
Sbjct: 61 VLLNIDGPAAVVSEIERQERIHEDVIRYLSIRVEEHEEGPSAMMRKADRDRERDDRGGGF 120
Query: 112 RNDRFPRDRNVDRKQHVSEEKPL 134
R DR R + EE P
Sbjct: 121 RGDREGGFRGDRGPRRPREEAPA 143
>gi|119502818|ref|ZP_01624903.1| Na+/solute symporter [marine gamma proteobacterium HTCC2080]
gi|119461164|gb|EAW42254.1| Na+/solute symporter [marine gamma proteobacterium HTCC2080]
Length = 151
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++I ++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVFMVHPD-QSEQVPGMIERYSAVITKDGGTVHRLEDWGRRQLAYHINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRN---DR 115
+ MN+ + A+ E+ R ++ V+R+L + D E+S + ++ DR+ ++ +R
Sbjct: 60 ILMNVEASNEAMEELSTTFRYNDAVIRNLVIRRDELVAEESLIMKAEKEDRERKSRYQER 119
Query: 116 FPRDRNVDRKQHVSEEKPL 134
+ + SE+ P
Sbjct: 120 QAAESKPPEAEKDSEDAPA 138
>gi|75675883|ref|YP_318304.1| 30S ribosomal protein S6 [Nitrobacter winogradskyi Nb-255]
gi|91207925|sp|Q3SRY9|RS6_NITWN RecName: Full=30S ribosomal protein S6
gi|74420753|gb|ABA04952.1| SSU ribosomal protein S6P [Nitrobacter winogradskyi Nb-255]
Length = 139
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 82/135 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q +I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTTQITGVITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI P ++E++R+ RI E+V+R LT+ VD HE P+ +++ DRD D
Sbjct: 61 VLLNIDGPATIVNEIERQERIHEDVIRYLTVRVDEHEDGPSAMMRKADRDRERDDRGGGF 120
Query: 121 NVDRKQHVSEEKPLS 135
DR E+P +
Sbjct: 121 RGDRGPRRPREEPAA 135
>gi|238757531|ref|ZP_04618716.1| 30S ribosomal protein S6 [Yersinia aldovae ATCC 35236]
gi|238764706|ref|ZP_04625650.1| 30S ribosomal protein S6 [Yersinia kristensenii ATCC 33638]
gi|238783559|ref|ZP_04627581.1| 30S ribosomal protein S6 [Yersinia bercovieri ATCC 43970]
gi|238787553|ref|ZP_04631351.1| 30S ribosomal protein S6 [Yersinia frederiksenii ATCC 33641]
gi|238792977|ref|ZP_04636606.1| 30S ribosomal protein S6 [Yersinia intermedia ATCC 29909]
gi|238797594|ref|ZP_04641091.1| 30S ribosomal protein S6 [Yersinia mollaretii ATCC 43969]
gi|238697102|gb|EEP89875.1| 30S ribosomal protein S6 [Yersinia kristensenii ATCC 33638]
gi|238704293|gb|EEP96825.1| 30S ribosomal protein S6 [Yersinia aldovae ATCC 35236]
gi|238715614|gb|EEQ07604.1| 30S ribosomal protein S6 [Yersinia bercovieri ATCC 43970]
gi|238718591|gb|EEQ10410.1| 30S ribosomal protein S6 [Yersinia mollaretii ATCC 43969]
gi|238724340|gb|EEQ15982.1| 30S ribosomal protein S6 [Yersinia frederiksenii ATCC 33641]
gi|238727577|gb|EEQ19102.1| 30S ribosomal protein S6 [Yersinia intermedia ATCC 29909]
Length = 122
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y + I G + + + G R +AY I K KA+YV +N+ +P
Sbjct: 1 MVHPD-QSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHV 128
AI E++ R ++ V+RS+ + V + ++ D F + N D +
Sbjct: 60 QEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERHDFASEANDDSEAGD 119
Query: 129 SEE 131
SEE
Sbjct: 120 SEE 122
>gi|226942912|ref|YP_002797985.1| 30S ribosomal protein S6 [Azotobacter vinelandii DJ]
gi|259495325|sp|C1DLR2|RS6_AZOVD RecName: Full=30S ribosomal protein S6
gi|226717839|gb|ACO77010.1| 30S ribosomal protein S6 [Azotobacter vinelandii DJ]
Length = 136
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VLINVECSGKALSELEDNFRYNDAVIRNLVIRRDEAITGQSEMLK 104
>gi|238755920|ref|ZP_04617248.1| 30S ribosomal protein S6 [Yersinia ruckeri ATCC 29473]
gi|238705879|gb|EEP98268.1| 30S ribosomal protein S6 [Yersinia ruckeri ATCC 29473]
Length = 122
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+YV +N+ +P
Sbjct: 1 MVHPD-QSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHV 128
AI E++ R ++ V+RS+ + V + + ++ D F + N D +
Sbjct: 60 QEAIDELETNFRFNDAVIRSMVMRVKNAVTEASPMVKAKDERRERHDFASETNDDSEAGD 119
Query: 129 SEE 131
SEE
Sbjct: 120 SEE 122
>gi|329850895|ref|ZP_08265740.1| ribosomal protein S6 [Asticcacaulis biprosthecum C19]
gi|328841210|gb|EGF90781.1| ribosomal protein S6 [Asticcacaulis biprosthecum C19]
Length = 125
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 73/117 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEH + RQDIS QQ + Q + LI++NGG + + G+R + YR++KNRK +Y
Sbjct: 1 MPFYEHTVIARQDISPQQAEALNDQLKHLIEDNGGHIAKIEYWGLRNLTYRVKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ I +P AA+ EM+R++ I+E+V+R LT+ V+ + + + R DR +R +R
Sbjct: 61 SLLAIDAPAAAVKEMERQLGINEDVIRFLTVRVEELDLELSPILSRRDRPERAERTE 117
>gi|110680235|ref|YP_683242.1| 30S ribosomal protein S6 [Roseobacter denitrificans OCh 114]
gi|123065437|sp|Q164N7|RS6_ROSDO RecName: Full=30S ribosomal protein S6
gi|109456351|gb|ABG32556.1| ribosomal protein S6 [Roseobacter denitrificans OCh 114]
Length = 117
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLSDNGGKLVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+HEM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRSDAPAPAVHEMERLMRLHDDVMRVLTIKVDEHAELPSVQMQK 106
>gi|121997454|ref|YP_001002241.1| 30S ribosomal protein S6 [Halorhodospira halophila SL1]
gi|166226971|sp|A1WUS7|RS6_HALHL RecName: Full=30S ribosomal protein S6
gi|121588859|gb|ABM61439.1| SSU ribosomal protein S6P [Halorhodospira halophila SL1]
Length = 119
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ + +Y+S+++ +GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSDQVPAMVERYRSIVESSGGTVHRLEDWGRRQLAYPINKLIKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + E+ R ++ V+R++ L D P+ + +++ R DR +
Sbjct: 60 VLMNVECGKDELDELTSAFRFNDAVIRNMVLSRDEAVTEPSPLAKGNEK--REDRKESED 117
Query: 121 N 121
Sbjct: 118 A 118
>gi|88704451|ref|ZP_01102165.1| 30S ribosomal protein S6 [Congregibacter litoralis KT71]
gi|88701502|gb|EAQ98607.1| 30S ribosomal protein S6 [Congregibacter litoralis KT71]
Length = 150
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I ++GG V + + G R +A+ I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTNTITKDGGSVHRLEDWGRRQLAFPIAKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
+ MN+ + A+ E+ R ++ V+R+L + D E+SP + ++ R +R R+
Sbjct: 60 ILMNVEASNEAMDELTTTFRYNDAVIRNLVIRRDEPVLEESPIMKAEKESR-ERKSRYED 118
Query: 119 DRNVDRKQHVSE 130
+ ++ + SE
Sbjct: 119 RQGSEKPRRDSE 130
>gi|292493501|ref|YP_003528940.1| ribosomal protein S6 [Nitrosococcus halophilus Nc4]
gi|291582096|gb|ADE16553.1| ribosomal protein S6 [Nitrosococcus halophilus Nc4]
Length = 148
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ LI+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQLPAMIERYRQLIETDGGRIHRLEDWGRRQLAYPIQKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ P AI E+ R ++ VLR + + + P+ + + R+ R
Sbjct: 60 VLMNVECTPQAIEELTSAFRFNDAVLRDVVMRREEAVTEPSPLAKGEESGSRSYDSSRPS 119
Query: 121 NVDRKQHV 128
DR++
Sbjct: 120 R-DREERD 126
>gi|15839150|ref|NP_299838.1| 30S ribosomal protein S6 [Xylella fastidiosa 9a5c]
gi|28199812|ref|NP_780126.1| 30S ribosomal protein S6 [Xylella fastidiosa Temecula1]
gi|71899834|ref|ZP_00681984.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|182682564|ref|YP_001830724.1| 30S ribosomal protein S6 [Xylella fastidiosa M23]
gi|54039538|sp|P66605|RS6_XYLFT RecName: Full=30S ribosomal protein S6
gi|54041980|sp|P66604|RS6_XYLFA RecName: Full=30S ribosomal protein S6
gi|226705650|sp|B2I9S9|RS6_XYLF2 RecName: Full=30S ribosomal protein S6
gi|9107773|gb|AAF85358.1|AE004063_7 30S ribosomal protein S6 [Xylella fastidiosa 9a5c]
gi|28057933|gb|AAO29775.1| 30S ribosomal protein S6 [Xylella fastidiosa Temecula1]
gi|71730425|gb|EAO32506.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|182632674|gb|ACB93450.1| ribosomal protein S6 [Xylella fastidiosa M23]
gi|307578844|gb|ADN62813.1| 30S ribosomal protein S6 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 143
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V L+ D S+Q++ + +Y++LI+ G++ + + G R +AY I+K KA+Y+
Sbjct: 3 RHYEIVLLVHPD-QSEQVQAMLERYKALIENGHGKIHRLEDWGRRQLAYPIQKLVKAHYL 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
MNI + ++E+ R ++ +LR L + + + ++ +DD+ D+ R R
Sbjct: 62 MMNIEVEQSVLNELVDLFRFNDAILRHLAIKRSGPDTEQSFIMKS--KDDKGDKPERRRR 119
Query: 122 VDRKQHV 128
D +
Sbjct: 120 DDDENGD 126
>gi|254480819|ref|ZP_05094065.1| ribosomal protein S6, putative [marine gamma proteobacterium
HTCC2148]
gi|214038614|gb|EEB79275.1| ribosomal protein S6, putative [marine gamma proteobacterium
HTCC2148]
Length = 148
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + IQ++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSATIQKDGGSVHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ + A+ E+ R ++ V+R+L + D + ++ ++ R+R
Sbjct: 60 VLMNVEASNEALDELTTTFRFNDAVIRNLVIRRDESVTDESFIMK-------AEKESRER 112
Query: 121 NVDRKQHVSEEKPL 134
++ + E P+
Sbjct: 113 KTRYEERKAAEAPV 126
>gi|99080886|ref|YP_613040.1| 30S ribosomal protein S6 [Ruegeria sp. TM1040]
gi|259418663|ref|ZP_05742580.1| ribosomal protein S6 [Silicibacter sp. TrichCH4B]
gi|123252445|sp|Q1GHT8|RS6_SILST RecName: Full=30S ribosomal protein S6
gi|99037166|gb|ABF63778.1| SSU ribosomal protein S6P [Ruegeria sp. TM1040]
gi|259344885|gb|EEW56739.1| ribosomal protein S6 [Silicibacter sp. TrichCH4B]
Length = 117
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLSDNGGKLVDQEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P +A+ EM+R MR+ ++V+R LT+ V+ H + P++ +Q+
Sbjct: 61 AFLRSDAPSSAVQEMERLMRLHDDVMRVLTIKVEEHAEGPSVQMQK 106
>gi|28872047|ref|NP_794666.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66043848|ref|YP_233689.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae B728a]
gi|71736652|ref|YP_272876.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213967933|ref|ZP_03396079.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato T1]
gi|237798287|ref|ZP_04586748.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. oryzae str. 1_6]
gi|257482399|ref|ZP_05636440.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289624606|ref|ZP_06457560.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648618|ref|ZP_06479961.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
2250]
gi|289672602|ref|ZP_06493492.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae FF5]
gi|298484906|ref|ZP_07003005.1| SSU ribosomal protein S6p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|301383750|ref|ZP_07232168.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato Max13]
gi|302059275|ref|ZP_07250816.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato K40]
gi|302132343|ref|ZP_07258333.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302185449|ref|ZP_07262122.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. syringae 642]
gi|32171518|sp|Q87VK3|RS6_PSESM RecName: Full=30S ribosomal protein S6
gi|75503617|sp|Q4ZYX1|RS6_PSEU2 RecName: Full=30S ribosomal protein S6
gi|91207931|sp|Q48NZ3|RS6_PSE14 RecName: Full=30S ribosomal protein S6
gi|28855300|gb|AAO58361.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato str. DC3000]
gi|63254555|gb|AAY35651.1| Ribosomal protein S6 [Pseudomonas syringae pv. syringae B728a]
gi|71557205|gb|AAZ36416.1| ribosomal protein S6 [Pseudomonas syringae pv. phaseolicola 1448A]
gi|213927276|gb|EEB60825.1| ribosomal protein S6 [Pseudomonas syringae pv. tomato T1]
gi|298160593|gb|EFI01615.1| SSU ribosomal protein S6p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320321874|gb|EFW77970.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331021|gb|EFW86995.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330865904|gb|EGH00613.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330872263|gb|EGH06412.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330873776|gb|EGH07925.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330886611|gb|EGH20272.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. mori str.
301020]
gi|330899905|gb|EGH31324.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330939889|gb|EGH43111.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. pisi str. 1704B]
gi|330951487|gb|EGH51747.1| 30S ribosomal protein S6 [Pseudomonas syringae Cit 7]
gi|330960079|gb|EGH60339.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330965991|gb|EGH66251.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330971570|gb|EGH71636.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|331009771|gb|EGH89827.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331014620|gb|EGH94676.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. lachrymans str.
M302278PT]
gi|331021139|gb|EGI01196.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 141
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLK 104
>gi|312113717|ref|YP_004011313.1| ribosomal protein S6 [Rhodomicrobium vannielii ATCC 17100]
gi|311218846|gb|ADP70214.1| ribosomal protein S6 [Rhodomicrobium vannielii ATCC 17100]
Length = 174
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 76/107 (71%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH FL RQD+++QQ+ + Y+++I+E+GG+V G+++ AY+I+KNR+A+Y
Sbjct: 1 MPLYEHTFLARQDVTAQQVTGLMNTYKAVIEEHGGKVSKTEYWGLKSTAYKIKKNRRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
F NI +P A+ EM+R+M I +VLR LT+ V+ ++ P++ +++
Sbjct: 61 AFFNIDAPHQAVLEMERQMGISTDVLRFLTVRVEELDEKPSIQMRKQ 107
>gi|238897796|ref|YP_002923475.1| 30S ribosomal subunit protein S6 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259495337|sp|C4K434|RS6_HAMD5 RecName: Full=30S ribosomal protein S6
gi|229465553|gb|ACQ67327.1| 30S ribosomal subunit protein S6 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 143
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S Q+ I +Y ++I ++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSDQVPGMIQRYSTVITQSGGQIHRIEDWGRRQLAYAINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDR--------- 109
V +N+ +P AI+E++ R ++ V+R+L ++ E+SP + ++ R
Sbjct: 60 VLLNVEAPQNAINELETNFRFNDAVMRNLIKRMNHAVTEESPIIKMKDERREVVELTTSG 119
Query: 110 -DDRNDRFPRDRNVDRKQHVSEE 131
+D ++ + SEE
Sbjct: 120 SEDNQKDHHKEDLDKKTDEFSEE 142
>gi|114768973|ref|ZP_01446599.1| Ribosomal protein S6 [alpha proteobacterium HTCC2255]
gi|114549890|gb|EAU52771.1| Ribosomal protein S6 [alpha proteobacterium HTCC2255]
Length = 119
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 73/107 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVF+ RQD+S+ Q + I + +++ +N G+V G++T+AY+I KNRK +Y
Sbjct: 1 MALYEHVFISRQDLSNAQAEGLIEHFSAVLSDNDGKVIDQEYWGLKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
F+ +P +A+ EM+R MR+ E+V+R +T+ VD HE+ P++ IQ
Sbjct: 61 AFLKSDAPSSAVQEMERLMRLHEDVMRVMTIRVDEHEEGPSVVIQAK 107
>gi|332529063|ref|ZP_08405028.1| 30S ribosomal protein S6 [Hylemonella gracilis ATCC 19624]
gi|332041507|gb|EGI77868.1| 30S ribosomal protein S6 [Hylemonella gracilis ATCC 19624]
Length = 122
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D S+Q+ + +Y+ ++ GG+V V + G R + Y I K KA+Y
Sbjct: 1 MRHYEIILMIHPD-QSEQVPAMLERYKGMVTTGGGKVHRVEDWGRRQMTYLINKLAKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ +NI + A + E++ + + VLR LT++ E P+ ++ +R++
Sbjct: 60 LCLNIEADRAVMEELEHAFKFSDAVLRHLTVVKKKAETGPSAMMKAVEREE 110
>gi|165918507|ref|ZP_02218593.1| ribosomal protein S6 [Coxiella burnetii RSA 334]
gi|165917753|gb|EDR36357.1| ribosomal protein S6 [Coxiella burnetii RSA 334]
Length = 127
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +YQS+I+E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPD-QSSQVPAMVERYQSMIKEKGGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ MNI S I E++ R ++ V+RSL L D +L +Q ++ + +
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQGAEKGKSSRK 114
>gi|331007840|ref|ZP_08330939.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC1989]
gi|330418357|gb|EGG92924.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC1989]
Length = 144
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y + I E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVAGMVERYTASINEEGGQVHRLEDWGRRHLAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR---HDRDDRNDRFP 117
+ MN+ ++E+ R ++ VLR + + D + ++
Sbjct: 60 ILMNVECSDTVLNELTTTFRYNDAVLRHMVIRTDEAVVEESPIMKAEKEGRERRTRREER 119
Query: 118 RDRNVDRKQHVSEEKPLS 135
+ ++K+ SE P S
Sbjct: 120 SEPAQEQKKESSEAAPAS 137
>gi|26991557|ref|NP_746982.1| 30S ribosomal protein S6 [Pseudomonas putida KT2440]
gi|148549960|ref|YP_001270062.1| 30S ribosomal protein S6 [Pseudomonas putida F1]
gi|167035923|ref|YP_001671154.1| 30S ribosomal protein S6 [Pseudomonas putida GB-1]
gi|170723829|ref|YP_001751517.1| 30S ribosomal protein S6 [Pseudomonas putida W619]
gi|325271217|ref|ZP_08137762.1| 30S ribosomal protein S6 [Pseudomonas sp. TJI-51]
gi|32171520|sp|Q88DE8|RS6_PSEPK RecName: Full=30S ribosomal protein S6
gi|166227368|sp|A5W9R8|RS6_PSEP1 RecName: Full=30S ribosomal protein S6
gi|189045488|sp|B0KKY3|RS6_PSEPG RecName: Full=30S ribosomal protein S6
gi|226695117|sp|B1JAH1|RS6_PSEPW RecName: Full=30S ribosomal protein S6
gi|24986642|gb|AAN70446.1|AE016685_11 ribosomal protein S6 [Pseudomonas putida KT2440]
gi|148514018|gb|ABQ80878.1| SSU ribosomal protein S6P [Pseudomonas putida F1]
gi|166862411|gb|ABZ00819.1| ribosomal protein S6 [Pseudomonas putida GB-1]
gi|169761832|gb|ACA75148.1| ribosomal protein S6 [Pseudomonas putida W619]
gi|313500861|gb|ADR62227.1| RpsF [Pseudomonas putida BIRD-1]
gi|324103620|gb|EGC00922.1| 30S ribosomal protein S6 [Pseudomonas sp. TJI-51]
Length = 141
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLK 104
>gi|220934099|ref|YP_002512998.1| ribosomal protein S6 [Thioalkalivibrio sp. HL-EbGR7]
gi|254765462|sp|B8GNS2|RS6_THISH RecName: Full=30S ribosomal protein S6
gi|219995409|gb|ACL72011.1| ribosomal protein S6 [Thioalkalivibrio sp. HL-EbGR7]
Length = 138
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y+ LI+ +GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSAMIERYRGLIEGDGGKIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V MN+ AA+ E+ R ++ V+R + +L++ + + +
Sbjct: 60 VLMNVECGEAALAELVSAFRFNDAVIRHMVMLMERAFTEASPLAKGREE 108
>gi|330984551|gb|EGH82654.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 141
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECAGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLK 104
>gi|167646474|ref|YP_001684137.1| 30S ribosomal protein S6 [Caulobacter sp. K31]
gi|189045459|sp|B0SWL1|RS6_CAUSK RecName: Full=30S ribosomal protein S6
gi|167348904|gb|ABZ71639.1| ribosomal protein S6 [Caulobacter sp. K31]
Length = 126
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHV + RQDIS QQ + Q ++L++ENGG + + G+R + YRI+KNRK +Y
Sbjct: 1 MAFYEHVVIARQDISPQQAEALNEQLKALLEENGGHIAKIEYWGLRNLTYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ I +P AA+ EM+R++ I+E+VLR +T+ V+ + + + R DR +R +R R R
Sbjct: 61 SLLAIDAPAAAVKEMERQLLINEDVLRFMTIRVEELDLELSPVLARRDR-ERGERSERPR 119
Query: 121 NV 122
+
Sbjct: 120 DD 121
>gi|86138736|ref|ZP_01057308.1| ribosomal protein S6 [Roseobacter sp. MED193]
gi|85824383|gb|EAQ44586.1| ribosomal protein S6 [Roseobacter sp. MED193]
Length = 117
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + + + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLVEHFGAVLADNEGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AAI EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRTDAPAAAIQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|296532306|ref|ZP_06895045.1| 30S ribosomal protein S6 [Roseomonas cervicalis ATCC 49957]
gi|296267382|gb|EFH13268.1| 30S ribosomal protein S6 [Roseomonas cervicalis ATCC 49957]
Length = 171
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 76/129 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D++ Q++ Q S+I E GGEV+ G+R +AYRI+KNRKA+Y
Sbjct: 16 MPLYETVLIARNDLTQAQVEAIADQVTSVITEAGGEVKKREYWGLRGLAYRIKKNRKAHY 75
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + + P AA E+ R++ ++E+VLR +TL +++ +++P+ + + D DR R
Sbjct: 76 MLLGLDCPAAAEQEVARQLGLNEDVLRHMTLRIEAIDEAPSAILAKRGDDRERDRGFRGP 135
Query: 121 NVDRKQHVS 129
+ S
Sbjct: 136 RPAAGRFSS 144
>gi|163731327|ref|ZP_02138774.1| 30S ribosomal protein S6 [Roseobacter litoralis Och 149]
gi|161394781|gb|EDQ19103.1| 30S ribosomal protein S6 [Roseobacter litoralis Och 149]
Length = 117
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +NGG + G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLSDNGGALVDHEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+HEM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 AFLRSDAPAPAVHEMERLMRLHDDVMRVLTIKVDEHAELPSVQMQK 106
>gi|71275196|ref|ZP_00651483.1| Ribosomal protein S6 [Xylella fastidiosa Dixon]
gi|71898276|ref|ZP_00680450.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|170731187|ref|YP_001776620.1| 30S ribosomal protein S6 [Xylella fastidiosa M12]
gi|226705651|sp|B0U5H2|RS6_XYLFM RecName: Full=30S ribosomal protein S6
gi|71164005|gb|EAO13720.1| Ribosomal protein S6 [Xylella fastidiosa Dixon]
gi|71732015|gb|EAO34072.1| Ribosomal protein S6 [Xylella fastidiosa Ann-1]
gi|167965980|gb|ACA12990.1| 30S ribosomal protein S6 [Xylella fastidiosa M12]
Length = 143
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V L+ D S+Q++ + +Y++LI+ G++ + + G R +AY I+K KA+Y+
Sbjct: 3 RHYEIVLLVHPD-QSEQVQAMLERYKALIENGHGKIHRLEDWGRRQLAYPIQKLVKAHYL 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
MNI + ++E+ R ++ +LR L + + ++ +DD+ D+ R R
Sbjct: 62 MMNIEVEQSVLNELVDLFRFNDAILRHLAIKRSGPYTEQSFIMKS--KDDKGDKPERRRR 119
Query: 122 VDRKQHV 128
D +
Sbjct: 120 DDDESGD 126
>gi|307822878|ref|ZP_07653109.1| ribosomal protein S6 [Methylobacter tundripaludum SV96]
gi|307736482|gb|EFO07328.1| ribosomal protein S6 [Methylobacter tundripaludum SV96]
Length = 152
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S Q+ I +Y+S I+ G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSSQVPAMIERYKSTIETASGKIHRLEDWGRRHLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MN+ A + E++ R ++ +LRS+TLL + ++ +++
Sbjct: 60 VLMNVECDQATLEELESGFRFNDAILRSMTLLQKAAITEASIIATSTAEENKA 112
>gi|146283970|ref|YP_001174123.1| 30S ribosomal protein S6 [Pseudomonas stutzeri A1501]
gi|166227369|sp|A4VQN0|RS6_PSEU5 RecName: Full=30S ribosomal protein S6
gi|145572175|gb|ABP81281.1| ribosomal protein S6 [Pseudomonas stutzeri A1501]
gi|327482298|gb|AEA85608.1| 30S ribosomal protein S6 [Pseudomonas stutzeri DSM 4166]
Length = 138
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECSGKALAELEDNFRYNDAVIRNLIIRRDEAVTEQSEMLK 104
>gi|83591754|ref|YP_425506.1| 30S ribosomal protein S6 [Rhodospirillum rubrum ATCC 11170]
gi|91207786|sp|Q2RXC6|RS6_RHORT RecName: Full=30S ribosomal protein S6
gi|83574668|gb|ABC21219.1| SSU ribosomal protein S6P [Rhodospirillum rubrum ATCC 11170]
Length = 160
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 73/107 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + RQDIS+ Q+ + +++ E GG V G+RT+ +RI+KNRK +Y
Sbjct: 1 MALYECVLIARQDISNAQVDTMGDEVSAILSEGGGSVSKREYWGLRTLNFRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ +NI +P A+HE+ R++R++E+V+R +T+ V+ E++P+ +Q++
Sbjct: 61 LLLNIDAPAPAVHELDRRLRLNEDVIRHMTVKVEELEEAPSAMMQKN 107
>gi|85716344|ref|ZP_01047317.1| 30S ribosomal protein S6 [Nitrobacter sp. Nb-311A]
gi|85696860|gb|EAQ34745.1| 30S ribosomal protein S6 [Nitrobacter sp. Nb-311A]
Length = 139
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD SSQQ+++ Q I GG+V G+R++ YR++KNRKA++
Sbjct: 1 MPLYEHVFLARQDASSQQVEELTNQITGAITGLGGKVTKTENWGVRSLTYRMKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P ++E++R+ RI E+V+R LT+ VD HE+ P+ +++
Sbjct: 61 VLLNIDGPATIVNEIERQERIHEDVIRYLTVRVDEHEEGPSAMMRK 106
>gi|71281997|ref|YP_267173.1| 30S ribosomal protein S6 [Colwellia psychrerythraea 34H]
gi|91207909|sp|Q489U1|RS6_COLP3 RecName: Full=30S ribosomal protein S6
gi|71147737|gb|AAZ28210.1| ribosomal protein S6 [Colwellia psychrerythraea 34H]
Length = 143
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y LI G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVSGMIQRYTDLINAAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRND 114
V MNI +P I E++ R ++ V+R++ + E SP + RDDR +
Sbjct: 60 VLMNIEAPQVVIDELETAFRYNDVVIRNMIMRTKDAVTEASPMAAAKEERRDDRRE 115
>gi|217977083|ref|YP_002361230.1| 30S ribosomal protein S6 [Methylocella silvestris BL2]
gi|254765445|sp|B8ESH8|RS6_METSB RecName: Full=30S ribosomal protein S6
gi|217502459|gb|ACK49868.1| ribosomal protein S6 [Methylocella silvestris BL2]
Length = 146
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 77/106 (72%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH++L RQD+S+QQ++ Q++ +I+ GG++ V G++T+AYRI+KNRKA++
Sbjct: 1 MALYEHIYLARQDVSAQQVETLTEQFRGIIESLGGKIEKVEYWGVKTLAYRIKKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+NI +P AAI EM+R+ ++E+VLR LT+ V++ E + +++
Sbjct: 61 TLLNIDAPAAAITEMERQSSLNEDVLRLLTIRVEALEAGQSAMMRK 106
>gi|153209207|ref|ZP_01947273.1| ribosomal protein S6 [Coxiella burnetii 'MSU Goat Q177']
gi|212218344|ref|YP_002305131.1| 30S ribosomal protein S6 [Coxiella burnetii CbuK_Q154]
gi|226703445|sp|B6J6T7|RS6_COXB1 RecName: Full=30S ribosomal protein S6
gi|120575462|gb|EAX32086.1| ribosomal protein S6 [Coxiella burnetii 'MSU Goat Q177']
gi|212012606|gb|ACJ19986.1| SSU ribosomal protein S6P [Coxiella burnetii CbuK_Q154]
Length = 127
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +YQS+I+E GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPD-QSSQVPAMVERYQSMIKEKGGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ MNI S I E++ R ++ V+RSL L D +L +Q ++ + +
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITQSSLIMQGAEKGKSSRKE 115
>gi|77456762|ref|YP_346267.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf0-1]
gi|91207934|sp|Q3KIX8|RS6_PSEPF RecName: Full=30S ribosomal protein S6
gi|77380765|gb|ABA72278.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf0-1]
Length = 142
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLK 104
>gi|119713692|gb|ABL97742.1| ribosomal protein S6 [uncultured marine bacterium EB0_41B09]
Length = 203
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I + Q + N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFIVHPD-QSEQVPSMIERIQKSVTANKGNIHRLEDWGRRQLAYPIQKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI ++ E++ + ++ V+R L + + S + + ++++ +
Sbjct: 60 VLMNIECSLESLAELEHNFKFNDAVIRHLVVSKKTAVTSESPMMG----EEKSKSLLGEN 115
Query: 121 NVDRKQHVSEEKPL 134
+ K E+ P
Sbjct: 116 KNNTKSEAEEKAPA 129
>gi|146329026|ref|YP_001210005.1| ribosomal protein S6 [Dichelobacter nodosus VCS1703A]
gi|166226827|sp|A5EXN1|RS6_DICNV RecName: Full=30S ribosomal protein S6
gi|146232496|gb|ABQ13474.1| ribosomal protein S6 [Dichelobacter nodosus VCS1703A]
Length = 108
Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y++ I+ G+V + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVSAMVERYRAQIEAAQGKVHRLEDWGRRVLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ MNI + E++ R ++ +LR + + D ++ +Q +
Sbjct: 60 ILMNIECDRQTLAELESNFRFNDAILRHMIIRRDEAVTEASMMMQEVKK 108
>gi|58038781|ref|YP_190745.1| 30S ribosomal protein S6 [Gluconobacter oxydans 621H]
gi|81352549|sp|Q5FU57|RS6_GLUOX RecName: Full=30S ribosomal protein S6
gi|58001195|gb|AAW60089.1| SSU ribosomal protein S6P [Gluconobacter oxydans 621H]
Length = 160
Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S Q++ + ++L+++NGG ++ G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYESVLIARNDVSQAQVETLVETIETLLKDNGGSIQKREFWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
V + + P + E++R++ ++E+VLR LTL VD +++P+ + R DDR DR
Sbjct: 61 VLLGLDCTPDTLRELERQLGLNEDVLRVLTLRVDEIDENPSSVLARKS-DDRGDRG 115
>gi|146305680|ref|YP_001186145.1| 30S ribosomal protein S6 [Pseudomonas mendocina ymp]
gi|330501634|ref|YP_004378503.1| 30S ribosomal protein S6 [Pseudomonas mendocina NK-01]
gi|166227367|sp|A4XPZ7|RS6_PSEMY RecName: Full=30S ribosomal protein S6
gi|145573881|gb|ABP83413.1| SSU ribosomal protein S6P [Pseudomonas mendocina ymp]
gi|328915920|gb|AEB56751.1| 30S ribosomal protein S6 [Pseudomonas mendocina NK-01]
Length = 140
Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLK 104
>gi|90423799|ref|YP_532169.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisB18]
gi|122476387|sp|Q215T6|RS6_RHOPB RecName: Full=30S ribosomal protein S6
gi|90105813|gb|ABD87850.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisB18]
Length = 168
Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 75/106 (70%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q S+I+ GG+V + G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITSVIEGLGGKVVKMESWGVRSLTYRMHKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+V+R LT+ VD E+ P+ +++
Sbjct: 61 VLLNIDGPSAVVAEVERQERINEDVIRYLTVRVDELEEGPSAMMRK 106
>gi|281603662|gb|ADA76646.1| 30S ribosomal protein S6 [Shigella flexneri 2002017]
gi|313646323|gb|EFS10785.1| ribosomal protein S6 [Shigella flexneri 2a str. 2457T]
gi|332083775|gb|EGI88993.1| ribosomal protein S6 [Shigella dysenteriae 155-74]
gi|332749344|gb|EGJ79765.1| ribosomal protein S6 [Shigella flexneri 4343-70]
gi|332763252|gb|EGJ93495.1| ribosomal protein S6 [Shigella flexneri 2930-71]
Length = 123
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+YV MN+ +P
Sbjct: 1 MVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRFPRDRNVDRKQH 127
I E++ R ++ V+RS+ + + ++ + +R +R D F + D +
Sbjct: 60 QEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANETADDAEAG 119
Query: 128 VSEE 131
SEE
Sbjct: 120 DSEE 123
>gi|116667415|pdb|2GY9|F Chain F, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667467|pdb|2GYB|F Chain F, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
Length = 95
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V MN+ +P I E++ R ++ V+RS+ +
Sbjct: 60 VLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHA 95
>gi|91977453|ref|YP_570112.1| 30S ribosomal protein S6 [Rhodopseudomonas palustris BisB5]
gi|123721764|sp|Q135M8|RS6_RHOPS RecName: Full=30S ribosomal protein S6
gi|91683909|gb|ABE40211.1| SSU ribosomal protein S6P [Rhodopseudomonas palustris BisB5]
Length = 160
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQITGVIEGLGGKVTKTEAWGLRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI P A + E++R+ RI+E+++R LT+ V+ HE+ P+ +++
Sbjct: 61 VMLNIDGPSAVVAEVERQERINEDIIRYLTVRVEEHEEGPSAMMRK 106
>gi|329896990|ref|ZP_08271783.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC3088]
gi|328921498|gb|EGG28883.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC3088]
Length = 147
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y +I+++GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTQIIEKDGGKVHRLEDWGRRQLAYTINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH-DRDDRNDRF 116
V MN+ + A+ E+ R ++ V+R+L + +D + S +L ++ + +R +R+
Sbjct: 60 VLMNVEASLEAMDELTTIFRYNDAVIRNLVIKMDEADTSESLIMKAEKESRERKNRY 116
>gi|154706381|ref|YP_001424309.1| 30S ribosomal protein S6 [Coxiella burnetii Dugway 5J108-111]
gi|189045462|sp|A9KFL5|RS6_COXBN RecName: Full=30S ribosomal protein S6
gi|154355667|gb|ABS77129.1| SSU ribosomal protein S6P [Coxiella burnetii Dugway 5J108-111]
Length = 126
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +YQS+I+E G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPD-QSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ MNI S I E++ R ++ V+RSL L D +L +Q ++ + +
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQGAEKGKSSSKK 115
>gi|153875702|ref|ZP_02003385.1| Ribosomal protein S6 [Beggiatoa sp. PS]
gi|152067834|gb|EDN66615.1| Ribosomal protein S6 [Beggiatoa sp. PS]
Length = 125
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D + Q+ I +YQ++I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QTDQVAAMIERYQAIIKEQDGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MN+ A+ E+ R ++ V+R L L+ P+ + + D++ + P
Sbjct: 60 VLMNVECNIKALDELVENFRFNDAVIRHLVLIQKRAITEPSPMSRPKE-DNQASQEPSYY 118
Query: 121 NVDRKQH 127
+ K H
Sbjct: 119 FDEDKHH 125
>gi|77163755|ref|YP_342280.1| ribosomal protein S6 [Nitrosococcus oceani ATCC 19707]
gi|254435448|ref|ZP_05048955.1| ribosomal protein S6, putative [Nitrosococcus oceani AFC27]
gi|91207924|sp|Q3JEJ6|RS6_NITOC RecName: Full=30S ribosomal protein S6
gi|76882069|gb|ABA56750.1| SSU ribosomal protein S6P [Nitrosococcus oceani ATCC 19707]
gi|207088559|gb|EDZ65831.1| ribosomal protein S6, putative [Nitrosococcus oceani AFC27]
Length = 156
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQLSAMMDRYRQIIETDGGCIHRLEDWGRRQLAYPIQKLYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI P I E+ R ++ VLR + + + + + + R R
Sbjct: 60 VLMNIECTPRTIEELTSAFRFNDAVLRDMVIRREEAITETSPLAKGEESGGRGYDSARSG 119
Query: 121 NVDRKQH 127
+
Sbjct: 120 RDRDESG 126
>gi|49076654|gb|AAT49585.1| PA4935 [synthetic construct]
Length = 140
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEMLK 104
>gi|126739373|ref|ZP_01755066.1| ribosomal protein S6 [Roseobacter sp. SK209-2-6]
gi|126719473|gb|EBA16182.1| ribosomal protein S6 [Roseobacter sp. SK209-2-6]
Length = 117
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 71/106 (66%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNSQAEGLIEHFGAVLADNEGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ + AA+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 SFLRTDASAAAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 106
>gi|153845041|ref|ZP_01993725.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus AQ3810]
gi|149745158|gb|EDM56409.1| 30S ribosomal protein S6 [Vibrio parahaemolyticus AQ3810]
Length = 128
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 6 HVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNI 65
VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+YV MN+
Sbjct: 5 IVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNV 63
Query: 66 ASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRK 125
+ A I E++ R ++ VLR++ + + ++ +++ + + + K
Sbjct: 64 EADQAVIDELETAFRFNDAVLRNMIMRTKAAITEQSIMLKQKEERAPRREERSEAKPEAK 123
Query: 126 QHVSE 130
+E
Sbjct: 124 SEAAE 128
>gi|254784759|ref|YP_003072187.1| 30S ribosomal protein S6 [Teredinibacter turnerae T7901]
gi|259495345|sp|C5BN45|RS6_TERTT RecName: Full=30S ribosomal protein S6
gi|237684065|gb|ACR11329.1| ribosomal protein S6 [Teredinibacter turnerae T7901]
Length = 151
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y S ++++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYTSAVKDSGGSVHRLEDWGRRQMAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRN 113
V MNI A+ E+ R ++ +LR++ + D E+SP ++ +R+ +N
Sbjct: 60 VLMNIECGDQALEELTTNFRYNDAILRNMVIRCDEAVTEESPIQKAEKENRERKN 114
>gi|83644549|ref|YP_432984.1| 30S ribosomal protein S6 [Hahella chejuensis KCTC 2396]
gi|123534100|sp|Q2SLB5|RS6_HAHCH RecName: Full=30S ribosomal protein S6
gi|83632592|gb|ABC28559.1| ribosomal protein S6 [Hahella chejuensis KCTC 2396]
Length = 142
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ + +Y S + GG+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVIMVHPD-QSEQVPAMVERYTSSVNAGGGKVHRLEDWGRRHMAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
V MNI I E+ R ++ +LR L + + R+ R R
Sbjct: 60 VLMNIECSQEVIDELMHNFRFNDAILRDLVIRRKDAVTEVSPIKAAESREQRAPRGE 116
>gi|257453410|ref|ZP_05618705.1| 30S ribosomal protein S6 [Enhydrobacter aerosaccus SK60]
gi|257449162|gb|EEV24110.1| 30S ribosomal protein S6 [Enhydrobacter aerosaccus SK60]
Length = 142
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y +L++E GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYINLVKEQGGAIHRLEDWGRRQLAYPINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
V +NI + + E++ R ++ ++RSL + D E+SP R + R
Sbjct: 60 VLLNIEAGQQTLDELEELFRYNDAIIRSLVIRRDEAITEESPLAKSAEEKRARKASRRND 119
Query: 119 DRNVDRKQHVSEEKPLS 135
D + + E + +
Sbjct: 120 TAQDDYQSNDDESEVDA 136
>gi|312958663|ref|ZP_07773183.1| 30S ribosomal protein S6 [Pseudomonas fluorescens WH6]
gi|311287206|gb|EFQ65767.1| 30S ribosomal protein S6 [Pseudomonas fluorescens WH6]
Length = 140
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + + + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRREEAVTGQSEMLK 104
>gi|229588086|ref|YP_002870205.1| 30S ribosomal protein S6 [Pseudomonas fluorescens SBW25]
gi|259495341|sp|C3KE67|RS6_PSEFS RecName: Full=30S ribosomal protein S6
gi|229359952|emb|CAY46806.1| 30S ribosomal protein S6 [Pseudomonas fluorescens SBW25]
Length = 140
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + + + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRREEAVTGQSEMLK 104
>gi|163746684|ref|ZP_02154041.1| 30S ribosomal protein S6 [Oceanibulbus indolifex HEL-45]
gi|161379798|gb|EDQ04210.1| 30S ribosomal protein S6 [Oceanibulbus indolifex HEL-45]
Length = 117
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAVQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|83943161|ref|ZP_00955621.1| ribosomal protein S6 [Sulfitobacter sp. EE-36]
gi|83954296|ref|ZP_00963016.1| ribosomal protein S6 [Sulfitobacter sp. NAS-14.1]
gi|83841333|gb|EAP80503.1| ribosomal protein S6 [Sulfitobacter sp. NAS-14.1]
gi|83846169|gb|EAP84046.1| ribosomal protein S6 [Sulfitobacter sp. EE-36]
Length = 120
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P A+ EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAVQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|315499769|ref|YP_004088572.1| ribosomal protein s6 [Asticcacaulis excentricus CB 48]
gi|315417781|gb|ADU14421.1| ribosomal protein S6 [Asticcacaulis excentricus CB 48]
Length = 124
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 78/124 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV L RQDIS QQ + ++LI+E GG V + G+R + YR++KNRKA+Y
Sbjct: 1 MALYEHVVLARQDISPQQAEGLNDTLKALIEELGGSVAKIEYWGLRNLTYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ I +P AA+ EM+R++ I+E+V+R LT+ V+ + + + R DR +R +R R
Sbjct: 61 SLLAIDAPAAAVKEMERQLSINEDVIRFLTVRVEELDLELSPVLSRRDRPERAERSERAE 120
Query: 121 NVDR 124
++
Sbjct: 121 FAEQ 124
>gi|254487872|ref|ZP_05101077.1| ribosomal protein S6 [Roseobacter sp. GAI101]
gi|214044741|gb|EEB85379.1| ribosomal protein S6 [Roseobacter sp. GAI101]
Length = 120
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 72/106 (67%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + RQD+S+ Q + I + +++ +N G++ G++T+AY+I KNRK +Y
Sbjct: 1 MPLYEHVMIARQDLSNTQAEGLIEHFGTVLADNDGKLVDSEYWGVKTMAYKINKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
F+ +P AI EM+R MR+ ++V+R LT+ VD H++ P++ +Q+
Sbjct: 61 AFLRSDAPATAIQEMERLMRLHDDVMRVLTIKVDEHKELPSVQMQK 106
>gi|89094157|ref|ZP_01167100.1| 30S ribosomal protein S6 [Oceanospirillum sp. MED92]
gi|89081632|gb|EAR60861.1| 30S ribosomal protein S6 [Oceanospirillum sp. MED92]
Length = 140
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ + S+Q+ + +Y SLI+ G + + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPN-QSEQVSAMVERYTSLIESAEGTIHRLEDWGRRQLAYPINNAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V MNI + E++ R ++ VLR++ + +
Sbjct: 60 VLMNIECGQETLDELENLFRYNDAVLRNMVIRRKEAITEISPIKAAE 106
>gi|15600128|ref|NP_253622.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PAO1]
gi|107104034|ref|ZP_01367952.1| hypothetical protein PaerPA_01005107 [Pseudomonas aeruginosa PACS2]
gi|116053084|ref|YP_793403.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152985524|ref|YP_001350983.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PA7]
gi|218894030|ref|YP_002442899.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa LESB58]
gi|296391775|ref|ZP_06881250.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PAb1]
gi|313109937|ref|ZP_07795865.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 39016]
gi|13959534|sp|Q9HUM9|RS6_PSEAE RecName: Full=30S ribosomal protein S6
gi|122256903|sp|Q02F83|RS6_PSEAB RecName: Full=30S ribosomal protein S6
gi|166227366|sp|A6VD48|RS6_PSEA7 RecName: Full=30S ribosomal protein S6
gi|226695116|sp|B7V1Z8|RS6_PSEA8 RecName: Full=30S ribosomal protein S6
gi|9951214|gb|AAG08320.1|AE004906_8 30S ribosomal protein S6 [Pseudomonas aeruginosa PAO1]
gi|115588305|gb|ABJ14320.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150960682|gb|ABR82707.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa PA7]
gi|218774258|emb|CAW30075.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa LESB58]
gi|310882367|gb|EFQ40961.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 39016]
Length = 139
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEMLK 104
>gi|90020704|ref|YP_526531.1| 30S ribosomal protein S6 [Saccharophagus degradans 2-40]
gi|123277536|sp|Q21LW0|RS6_SACD2 RecName: Full=30S ribosomal protein S6
gi|89950304|gb|ABD80319.1| SSU ribosomal protein S6P [Saccharophagus degradans 2-40]
Length = 152
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y + ++++GG V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMVERYTAAVKDSGGAVHRLEDWGRRQMAYSINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ MN+ + E+ R ++ VLR++ + D + ++ +
Sbjct: 60 ILMNVECGEEVLEELTTNFRYNDAVLRNMIIRCDEAVTEESPIMKAENE 108
>gi|330807240|ref|YP_004351702.1| 30S ribosomal protein S6 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375348|gb|AEA66698.1| 30S ribosomal protein S6 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 142
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + + + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRREEAVTGQSEMLK 104
>gi|289579515|ref|YP_003478142.1| ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|297545638|ref|YP_003677940.1| 30S ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529228|gb|ADD03580.1| ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|296843413|gb|ADH61929.1| ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 95
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIVENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSDSKVSQELERVYKITDGVLRYLIIRTDE 95
>gi|70734081|ref|YP_257721.1| 30S ribosomal protein S6 [Pseudomonas fluorescens Pf-5]
gi|91207932|sp|Q4KJ62|RS6_PSEF5 RecName: Full=30S ribosomal protein S6
gi|68348380|gb|AAY95986.1| ribosomal protein S6 [Pseudomonas fluorescens Pf-5]
Length = 141
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V +N+ A+ E++ R ++ V+R+L + + + ++
Sbjct: 60 VMLNVECTGKALAELEDNFRYNDAVIRNLVIRREEAITGQSEMLK 104
>gi|29654191|ref|NP_819883.1| 30S ribosomal protein S6 [Coxiella burnetii RSA 493]
gi|161830223|ref|YP_001596843.1| 30S ribosomal protein S6 [Coxiella burnetii RSA 331]
gi|212212683|ref|YP_002303619.1| 30S ribosomal protein S6 [Coxiella burnetii CbuG_Q212]
gi|61215752|sp|Q83D76|RS6_COXBU RecName: Full=30S ribosomal protein S6
gi|189045463|sp|A9ND53|RS6_COXBR RecName: Full=30S ribosomal protein S6
gi|226703446|sp|B6J0J6|RS6_COXB2 RecName: Full=30S ribosomal protein S6
gi|29541457|gb|AAO90397.1| SSU ribosomal protein S6P [Coxiella burnetii RSA 493]
gi|161762090|gb|ABX77732.1| ribosomal protein S6 [Coxiella burnetii RSA 331]
gi|212011093|gb|ACJ18474.1| SSU ribosomal protein S6P [Coxiella burnetii CbuG_Q212]
Length = 127
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +YQS+I+E G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVILVHPD-QSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ MNI S I E++ R ++ V+RSL L D +L +Q ++ + +
Sbjct: 60 LLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQGAEKGKSSRK 114
>gi|326391892|ref|ZP_08213402.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
gi|325992054|gb|EGD50536.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
Length = 95
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSNSKVSQELERVYKITDGVLRYLIIRTDE 95
>gi|304318116|ref|YP_003853261.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779618|gb|ADL70177.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 95
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D++ + I ++++LI E GGE+ V+E G R +AY I K + YY
Sbjct: 1 MRSYETIFIISPDVNDEARPALIEKFKNLITEKGGEITNVDEWGRRKLAYEIDKKSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S HE++R +I + +LR L + VD
Sbjct: 61 VLMNFNSDVDVPHELERVYKITDGILRYLIVKVDK 95
>gi|90416566|ref|ZP_01224497.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2207]
gi|90331765|gb|EAS46993.1| 30S ribosomal protein S6 [marine gamma proteobacterium HTCC2207]
Length = 153
Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y + I+ G+V + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVSGMIERYTASIEAGEGKVHRMEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E+ R ++ VLRSL + D + + ++ + D+ D+ R+R
Sbjct: 60 ILMNVECSQEVLDELSSTFRYNDAVLRSLVVRRDEAITAESPIMKIEN-ADKADKEARER 118
Query: 121 N 121
Sbjct: 119 R 119
>gi|254244174|ref|ZP_04937496.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 2192]
gi|126197552|gb|EAZ61615.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa 2192]
Length = 139
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLKDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEMLK 104
>gi|118602662|ref|YP_903877.1| 30S ribosomal protein S6 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166227378|sp|A1AWU9|RS6_RUTMC RecName: Full=30S ribosomal protein S6
gi|118567601|gb|ABL02406.1| SSU ribosomal protein S6P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 113
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I GG++ + G + +AY I+K KA+Y
Sbjct: 1 MRHYEITLIVHPD-QSAQVGTMMEKYKEIITTGGGKIHRKEDWGRKHLAYPIKKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ MNI + ++ R ++ +LR+L + D +P++ + D++
Sbjct: 60 LMMNIECDQEVLDKLNYNFRFNDAILRNLIISEDGVITTPSIMMANKDKEK 110
>gi|114569763|ref|YP_756443.1| 30S ribosomal protein S6 [Maricaulis maris MCS10]
gi|122316233|sp|Q0AQD2|RS6_MARMM RecName: Full=30S ribosomal protein S6
gi|114340225|gb|ABI65505.1| SSU ribosomal protein S6P [Maricaulis maris MCS10]
Length = 117
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH+F++R D+S Q++ + + ++LI+E GG+ + G+R ++YRI K+RK +Y
Sbjct: 1 MALYEHIFIVRPDVSPAQMESLLEETKALIEEKGGKTGKIEYWGLRNLSYRINKSRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
++I + I+E++R R+ E+V+R +TL V++H + P+ + + +DDR R R+
Sbjct: 61 GLIDIDAEADVINELERLQRLSEDVIRHMTLRVEAHTEEPSAILTK--KDDRRGRRERN 117
>gi|254520714|ref|ZP_05132770.1| RpsF [Clostridium sp. 7_2_43FAA]
gi|226914463|gb|EEH99664.1| RpsF [Clostridium sp. 7_2_43FAA]
Length = 96
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I+ GG + V+ G R +AY I K + +Y
Sbjct: 2 MRKYETIFILHPSLDEEACKANIEKFKGVIENGGGTIENVDVWGRRKLAYEIAKVNEGFY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + E+ R RI + VLR + + ++
Sbjct: 62 TLINFNADSELPKELDRIFRITDGVLRHIIVKQEA 96
>gi|93005860|ref|YP_580297.1| 30S ribosomal protein S6 [Psychrobacter cryohalolentis K5]
gi|122415535|sp|Q1QBZ0|RS6_PSYCK RecName: Full=30S ribosomal protein S6
gi|92393538|gb|ABE74813.1| SSU ribosomal protein S6P [Psychrobacter cryohalolentis K5]
Length = 131
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y L+Q+N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V NI + + E++ R ++ ++RSL + D + + + D++ R R
Sbjct: 60 VLFNIETDGETLAELEELFRYNDAIIRSLVMRRDDAVTEESQLAK--NADEKRARKATTR 117
Query: 121 NV 122
Sbjct: 118 RP 119
>gi|307265459|ref|ZP_07547015.1| ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919573|gb|EFN49791.1| ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 95
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKLEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSNSKVSQELERVYKITDGVLRYLIIRTDE 95
>gi|254516843|ref|ZP_05128901.1| Na+/solute symporter [gamma proteobacterium NOR5-3]
gi|219674348|gb|EED30716.1| Na+/solute symporter [gamma proteobacterium NOR5-3]
Length = 149
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y ++I ++GG V + + G R +A+ I K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVPGMIERYSNIITKDGGSVHRMEDWGRRQLAFPISKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
+ MN+ + A+ E+ R ++ V+R+L + D+ E+SP + ++ R+ ++ R
Sbjct: 60 ILMNVEASNEAMDELTTTFRYNDAVIRNLVIRRDAPDLEESPIMKAEKESRERKSRYEDR 119
Query: 119 D 119
Sbjct: 120 Q 120
>gi|254238350|ref|ZP_04931673.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa C3719]
gi|126170281|gb|EAZ55792.1| 30S ribosomal protein S6 [Pseudomonas aeruginosa C3719]
Length = 139
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y I+E+GG++ + G R +AY I KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSEQVGGMVERYTKAIEEDGGKIHRLKNWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V MN+ A+ E++ R ++ V+R+L + D + ++
Sbjct: 60 VLMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTEQSEMLK 104
>gi|322381357|ref|ZP_08055360.1| 30S ribosomal protein S6-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154933|gb|EFX47204.1| 30S ribosomal protein S6-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 95
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 57/91 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI Q++ T+ ++Q +I NGGE+ + +G R +AY I+K R +Y
Sbjct: 1 MRKYEIMYIIRPDIEQDQVQATVEKFQGIITNNGGEITKHDVMGKRRLAYEIKKFRDGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N + P + E+ R M+I + ++R L +
Sbjct: 61 VLVNFTAEPEVVKELDRVMKISDEIIRYLIV 91
>gi|114328878|ref|YP_746035.1| 30S ribosomal protein S6 [Granulibacter bethesdensis CGDNIH1]
gi|122326173|sp|Q0BPZ0|RS6_GRABC RecName: Full=30S ribosomal protein S6
gi|114317052|gb|ABI63112.1| SSU ribosomal protein S6P [Granulibacter bethesdensis CGDNIH1]
Length = 154
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D++ QQ++ SLI+ GG ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYESVLIARNDVTQQQVESVADHVASLIEAEGGAIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI-QRHDRDDRNDRFPRD 119
+ + + + PA I E++R++R++E+VLR +T+ V+ + P++ + ++ D +R R P+
Sbjct: 61 MLLGLDAKPATITEVERQLRLNEDVLRFMTIRVEEIDDVPSVILSRKSDDRERGFRGPKP 120
Query: 120 RN 121
Sbjct: 121 PG 122
>gi|332185227|ref|ZP_08386976.1| ribosomal protein S6 [Sphingomonas sp. S17]
gi|332014951|gb|EGI57007.1| ribosomal protein S6 [Sphingomonas sp. S17]
Length = 130
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 67/101 (66%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+FL RQD++ Q+ ++++N G+V G+R++AY+I KNRKA+YV + I
Sbjct: 1 MFLARQDLAQAQVDALAEAATKIVEDNQGKVVKTETWGLRSLAYKIAKNRKAHYVMLEID 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+P + E++R+ +I+E+V+R +T+ VD HE+ P++ +++
Sbjct: 61 APAGVVAELERQTQINEDVIRYMTVKVDGHEEGPSVMMRKQ 101
>gi|299133698|ref|ZP_07026892.1| ribosomal protein S6 [Afipia sp. 1NLS2]
gi|298591534|gb|EFI51735.1| ribosomal protein S6 [Afipia sp. 1NLS2]
Length = 150
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 20/150 (13%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +I+ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASAQQVEEFTTQITGVIEGLGGKVAKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
V +NI P A + E++R+ RI+E+++R LT+ VD E+ P+ +++
Sbjct: 61 VLLNIDGPAAIVSEIERQERINEDIIRYLTVRVDELEEGPSAMMRKADRDRERDDRGGGF 120
Query: 107 ------HDRDDRNDRFPRDRNVDRKQHVSE 130
D R++R PR D V E
Sbjct: 121 GGRGGDRDGGFRSERGPRRSRDDETASVEE 150
>gi|323705826|ref|ZP_08117398.1| ribosomal protein S6 [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534822|gb|EGB24601.1| ribosomal protein S6 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 95
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D++ + I ++++LI E GGE+ V+E G + +AY I K + YY
Sbjct: 1 MRAYETIFIISPDVNDEARPALIEKFKNLITEKGGEITKVDEWGRKKLAYEIDKKTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S HE++R +I + +LR L + VD
Sbjct: 61 VLMNFTSNVDVPHELERVYKITDGILRYLIVKVDK 95
>gi|296113492|ref|YP_003627430.1| 30S ribosomal protein S6 [Moraxella catarrhalis RH4]
gi|295921186|gb|ADG61537.1| 30S ribosomal protein S6 [Moraxella catarrhalis RH4]
gi|326559387|gb|EGE09812.1| 30S ribosomal protein S6 [Moraxella catarrhalis 46P47B1]
gi|326559760|gb|EGE10170.1| 30S ribosomal protein S6 [Moraxella catarrhalis 7169]
gi|326565024|gb|EGE15224.1| 30S ribosomal protein S6 [Moraxella catarrhalis 103P14B1]
gi|326568101|gb|EGE18185.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC7]
gi|326568518|gb|EGE18590.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC1]
gi|326572421|gb|EGE22413.1| 30S ribosomal protein S6 [Moraxella catarrhalis BC8]
gi|326572533|gb|EGE22522.1| 30S ribosomal protein S6 [Moraxella catarrhalis CO72]
gi|326574130|gb|EGE24078.1| 30S ribosomal protein S6 [Moraxella catarrhalis 101P30B1]
gi|326575566|gb|EGE25490.1| 30S ribosomal protein S6 [Moraxella catarrhalis O35E]
Length = 133
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ D + +Y+S++++NGG + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLLVHPD-QSNQVADMVTKYRSIVEDNGGNNHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI + +++ + ++ ++RSL + D + + + +D+ R R
Sbjct: 60 VLLNIECNDETLAQLEELFKYNDAIIRSLIIRRDEAITEQSPLAK--EAEDKRTRKANRR 117
Query: 121 NVDRKQHVSEEKPLS 135
N R Q + S
Sbjct: 118 NDVRTQEAESDNTAS 132
>gi|294084211|ref|YP_003550969.1| 30S ribosomal protein S6 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663784|gb|ADE38885.1| Ribosomal protein S6 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 146
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE VF+ RQD+SS Q++ ++ +I GG ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MRLYESVFIARQDVSSTQVEAMADEFAGIITSTGGSIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V N+ + + E +R M ++E+VLR + + ++ +++P++ +Q + +R R PRD
Sbjct: 61 VMFNMETDSDTLKEYERIMGLNEDVLRFMNIRIEEVDEAPSIMMQ--AKSERPSRGPRDD 118
Query: 121 NVDRKQHVSEEKPLS 135
+ + S++KP +
Sbjct: 119 DRRDDRPRSDDKPEA 133
>gi|192358927|ref|YP_001983437.1| 30S ribosomal protein S6 [Cellvibrio japonicus Ueda107]
gi|226703436|sp|B3PCS2|RS6_CELJU RecName: Full=30S ribosomal protein S6
gi|190685092|gb|ACE82770.1| 30S ribosomal protein S6 [Cellvibrio japonicus Ueda107]
Length = 147
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y S ++ +GG+V + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVVLIHPD-QSEQVPAMVERYTSTVKADGGQVHRFEDWGRRQLAYSINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH----DRDDRNDRF 116
V +N+ AA+ E+ R ++ VLRSL + D+ + ++ +R R R
Sbjct: 60 VLLNVECSDAALEELTTNFRYNDAVLRSLVIREDAAITEESFILKAEKEGRERKARPARA 119
Query: 117 PRDRNVDRKQHVSEEKPLS 135
R + + + EE +
Sbjct: 120 ERRDDTEAEDLSDEEGVEA 138
>gi|291515312|emb|CBK64522.1| SSU ribosomal protein S6P [Alistipes shahii WAL 8301]
Length = 114
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+++ ++Q +I ENGG++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVQEVADKFQGVITENGGQIVNKESWGLRKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + ++ ++ + R DE V+R LT D + + + + + +
Sbjct: 61 FLVEFTGEGSLVNTLETQYRRDERVIRFLTFKQDKYAVEYSEKRRAKLSNKQEE 114
>gi|71065894|ref|YP_264621.1| 30S ribosomal protein S6 [Psychrobacter arcticus 273-4]
gi|91207784|sp|Q4FS21|RS6_PSYA2 RecName: Full=30S ribosomal protein S6
gi|71038879|gb|AAZ19187.1| SSU ribosomal protein S6P [Psychrobacter arcticus 273-4]
Length = 132
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y L+Q+N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYELVLLVHPD-QSDQVVGMVERYIKLVQDNNGTIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
V NI + + E++ R ++ ++RSL + D + + ++ + R +
Sbjct: 60 VLFNIETDGETLAELEELFRYNDAIIRSLVMRRDDAVTEES-QLAKNADEKRARKA 114
>gi|114800162|ref|YP_760858.1| 30S ribosomal protein S6 [Hyphomonas neptunium ATCC 15444]
gi|123323137|sp|Q0C085|RS6_HYPNA RecName: Full=30S ribosomal protein S6
gi|114740336|gb|ABI78461.1| ribosomal protein S6 [Hyphomonas neptunium ATCC 15444]
Length = 112
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 67/111 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHV + R DIS Q++ I + + ++E G V G+R++AY I+K RK +Y
Sbjct: 1 MALYEHVVITRPDISPAQVESFIEEMTTFLKEKGATVGKTEYWGLRSLAYPIKKQRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+NI P AIHE++R+ RI E+V+R +T+ V++ P+ + R +R
Sbjct: 61 SLINIDGPADAIHELERRQRIAEDVMRYMTVRVETLSDEPSPVLSRKERRR 111
>gi|300115388|ref|YP_003761963.1| 30S ribosomal protein S6 [Nitrosococcus watsonii C-113]
gi|299541325|gb|ADJ29642.1| ribosomal protein S6 [Nitrosococcus watsonii C-113]
Length = 156
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ + +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQLSAMMDRYRQMIEVDGGRIHRLEDWGRRQLAYPIQKLYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR---NDRFP 117
V MNI P AI E+ R ++ VLR + + + + + + R R
Sbjct: 60 VLMNIECTPRAIEELTSAFRFNDAVLRDMVIQREEAITETSPLAKGEESSGRSYDGTRPG 119
Query: 118 RDRNVDRKQH 127
RDR +
Sbjct: 120 RDRGESSGRG 129
>gi|302346421|ref|YP_003814719.1| ribosomal protein S6 [Prevotella melaninogenica ATCC 25845]
gi|302150932|gb|ADK97193.1| ribosomal protein S6 [Prevotella melaninogenica ATCC 25845]
Length = 141
Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 28 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 87
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I ++ R DE V+R +T+ D + +
Sbjct: 88 ALLEFNAEPTVIDTLETGFRRDEKVIRYITVKQDKYSAA 126
>gi|109946866|ref|YP_664094.1| 30S ribosomal protein S6 [Helicobacter acinonychis str. Sheeba]
gi|123362772|sp|Q17Z31|RS6_HELAH RecName: Full=30S ribosomal protein S6
gi|109714087|emb|CAJ99095.1| 30S ribosomal protein S6 [Helicobacter acinonychis str. Sheeba]
Length = 142
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHNGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ-------------SPTLTIQRH 107
M + P+ I E++R RI+E+VLR + + DS ++ P+ ++H
Sbjct: 61 YVMYFKAEPSMILELERLYRINEDVLRFIVIKYDSKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + ++ H
Sbjct: 121 EKTEHAHSHHTEEAGSKESHSE 142
>gi|20809110|ref|NP_624281.1| 30S ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
gi|24212292|sp|Q8R6M1|RS6_THETN RecName: Full=30S ribosomal protein S6
gi|20517788|gb|AAM25885.1| Ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
Length = 95
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D++ ++ K I ++++LI E GGE+ +E G R +AY I+K + YY
Sbjct: 1 MRSYETMYVLSPDLNEEERKGLIERFKNLIVERGGEITNFDEWGKRKLAYPIQKKSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V MN S P E++R RI + VLR L + D
Sbjct: 61 VLMNFNSSPDVSRELERVYRITDGVLRYLIIRTD 94
>gi|118444568|ref|YP_876989.1| 30S ribosomal protein S6 [Clostridium novyi NT]
gi|166226824|sp|A0PX87|RS6_CLONN RecName: Full=30S ribosomal protein S6
gi|118135024|gb|ABK62068.1| ribosomal protein S6 [Clostridium novyi NT]
Length = 95
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I++ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILNPSLDEEATKAAIEKFKGVIEKEGGVVENVDEWGRRKLAYPINKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E++R RI + V+R + + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVVNPEK 95
>gi|326566024|gb|EGE16184.1| 30S ribosomal protein S6 [Moraxella catarrhalis 12P80B1]
Length = 133
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ D + +Y+S++++NGG + + G R +AY I K KA+Y
Sbjct: 1 MRHYEVVLLVHPD-QSNQVADMVTKYRSIVEDNGGNNHRLEDWGRRQLAYPISKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +NI + +++ + ++ ++RSL + D + + + +D+ R R
Sbjct: 60 VLLNIECNDETLAQLEELFKYNDAIIRSLIIRRDEAITEQSPLAK--EAEDKRTRKANRR 117
Query: 121 NVDRKQHVSEEKPLS 135
N R Q + S
Sbjct: 118 NDVRTQEAESDNTAS 132
>gi|148255213|ref|YP_001239798.1| 30S ribosomal protein S6 [Bradyrhizobium sp. BTAi1]
gi|166226804|sp|A5EI98|RS6_BRASB RecName: Full=30S ribosomal protein S6
gi|146407386|gb|ABQ35892.1| SSU ribosomal protein S6P [Bradyrhizobium sp. BTAi1]
Length = 153
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ VD E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVDELEEGPSAMMRK 106
>gi|162149103|ref|YP_001603564.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545154|ref|YP_002277383.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|189045471|sp|A9H1N0|RS6_GLUDA RecName: Full=30S ribosomal protein S6
gi|161787680|emb|CAP57276.1| 30S ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532831|gb|ACI52768.1| ribosomal protein S6 [Gluconacetobacter diazotrophicus PAl 5]
Length = 161
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE VF+ R D+S QQ++ +L++ +GG V+ G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYETVFIARNDVSQQQVEAVADGIAALLETDGGAVKKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI-QRHDRDDRNDRFPR 118
+ + + + P I E++R++ ++E+V+R LTL VD +++P++ + ++ D +R R P+
Sbjct: 61 MLLGLDAKPETIKEIERQLGLNEDVMRVLTLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|167038654|ref|YP_001666232.1| 30S ribosomal protein S6 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167041004|ref|YP_001663989.1| 30S ribosomal protein S6 [Thermoanaerobacter sp. X514]
gi|256751476|ref|ZP_05492354.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus CCSD1]
gi|300913785|ref|ZP_07131102.1| ribosomal protein S6 [Thermoanaerobacter sp. X561]
gi|307725529|ref|YP_003905280.1| 30S ribosomal protein S6 [Thermoanaerobacter sp. X513]
gi|320117046|ref|YP_004187205.1| 30S ribosomal protein S6 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|226695294|sp|B0K8G4|RS6_THEP3 RecName: Full=30S ribosomal protein S6
gi|226695295|sp|B0K5L9|RS6_THEPX RecName: Full=30S ribosomal protein S6
gi|166855244|gb|ABY93653.1| ribosomal protein S6 [Thermoanaerobacter sp. X514]
gi|166857488|gb|ABY95896.1| ribosomal protein S6 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749695|gb|EEU62721.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus CCSD1]
gi|300890470|gb|EFK85615.1| ribosomal protein S6 [Thermoanaerobacter sp. X561]
gi|307582590|gb|ADN55989.1| ribosomal protein S6 [Thermoanaerobacter sp. X513]
gi|319930137|gb|ADV80822.1| ribosomal protein S6 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 95
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L D+S ++ K I ++++LI ENGGE+ +E G R +AY I K + YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYLIDKKPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN S E++R +I + VLR L + D
Sbjct: 61 VLMNFNSDSKVSQELERVYKITDGVLRYLIIRTDE 95
>gi|329890141|ref|ZP_08268484.1| ribosomal protein S6 [Brevundimonas diminuta ATCC 11568]
gi|328845442|gb|EGF95006.1| ribosomal protein S6 [Brevundimonas diminuta ATCC 11568]
Length = 125
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQDIS+QQ + ++LI+ENGG V + G+R + YR++KNRKA+Y
Sbjct: 1 MALYEHTVMTRQDISAQQAEALNDTIKALIEENGGSVAKIEYWGLRNLTYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
M + PPAA+ E++R++ I+E+VLR LT+ V+ + + + R +R +R+ PR
Sbjct: 61 SLMAVDCPPAAMAEVERQLSINEDVLRWLTIRVEELDLELSPLLARRER-ERDRSAPRGD 119
Query: 121 NVDRKQ 126
+ +
Sbjct: 120 DAAASE 125
>gi|255016569|ref|ZP_05288695.1| 30S ribosomal protein S6 [Bacteroides sp. 2_1_7]
Length = 145
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ +L++ G E+ G+R +AY I K +Y
Sbjct: 28 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKAQGAEIVNEENWGLRKLAYPIDKKTTGFY 87
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ + P+ I ++ R DE V+R LT D + +
Sbjct: 88 QLVEFKADPSVIATLELNFRRDERVIRFLTFRQDKYAAEYAAKRR 132
>gi|255527664|ref|ZP_05394523.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|296186803|ref|ZP_06855204.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|255508644|gb|EET85025.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
gi|296048517|gb|EFG87950.1| ribosomal protein S6 [Clostridium carboxidivorans P7]
Length = 95
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + +K + +++ +I+ GG V V+ G R +AY I K + Y
Sbjct: 1 MRKYETIFILHPSLDEEAVKANVEKFKGVIENGGGVVDNVDAWGKRKLAYEINKIGEGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N ++ P E+ R RI + V+R + + +
Sbjct: 61 TLINFSAGPELPKELDRVFRITDTVIRHIIVKDEK 95
>gi|254372904|ref|ZP_04988393.1| 30S ribosomal protein S6 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374358|ref|ZP_04989840.1| 30S ribosomal protein S6 [Francisella novicida GA99-3548]
gi|151570631|gb|EDN36285.1| 30S ribosomal protein S6 [Francisella novicida GA99-3549]
gi|151572078|gb|EDN37732.1| 30S ribosomal protein S6 [Francisella novicida GA99-3548]
Length = 111
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|332678242|gb|AEE87371.1| SSU ribosomal protein S6p [Francisella cf. novicida Fx1]
Length = 111
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG+V + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKVHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|224438131|ref|ZP_03659066.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
gi|313144571|ref|ZP_07806764.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
gi|313129602|gb|EFR47219.1| 30S ribosomal protein S6 [Helicobacter cinaedi CCUG 18818]
Length = 136
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IK I ++ +I +NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MKFYETMFILKPTLVEEEIKARIDFFKEVITKNGGEIETCLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS---PTLTIQRHDRDDRNDRFP 117
+ + P+ I E++R RI+E +LR + + +S ++ +L + +++ + P
Sbjct: 61 FVIYFKAEPSLILELERNYRINEEILRFIVIKYESKKEQNAWQSLVNKANNKPEAKATKP 120
Query: 118 RDRNVDRKQHVSEEKPLS 135
+ + + ++E P +
Sbjct: 121 KKE--ETPKADTQESPQA 136
>gi|56708147|ref|YP_170043.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89256363|ref|YP_513725.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
LVS]
gi|110670618|ref|YP_667175.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC198]
gi|118497543|ref|YP_898593.1| 30S ribosomal protein S6 [Francisella tularensis subsp. novicida
U112]
gi|134301960|ref|YP_001121929.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|167010708|ref|ZP_02275639.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC200]
gi|187931623|ref|YP_001891607.1| 30S ribosomal protein S6 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457243|ref|ZP_03665716.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254367699|ref|ZP_04983720.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
257]
gi|254369337|ref|ZP_04985349.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC022]
gi|254370631|ref|ZP_04986636.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC033]
gi|254874950|ref|ZP_05247660.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|290954056|ref|ZP_06558677.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
URFT1]
gi|295312549|ref|ZP_06803309.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
URFT1]
gi|61215373|sp|Q5NFZ9|RS6_FRATT RecName: Full=30S ribosomal protein S6
gi|122500738|sp|Q2A3H7|RS6_FRATH RecName: Full=30S ribosomal protein S6
gi|122970928|sp|Q14HF1|RS6_FRAT1 RecName: Full=30S ribosomal protein S6
gi|166226831|sp|A0Q6H4|RS6_FRATN RecName: Full=30S ribosomal protein S6
gi|166226967|sp|A4IY07|RS6_FRATW RecName: Full=30S ribosomal protein S6
gi|226703470|sp|B2SGH0|RS6_FRATM RecName: Full=30S ribosomal protein S6
gi|56604639|emb|CAG45695.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89144194|emb|CAJ79463.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
LVS]
gi|110320951|emb|CAL09078.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC198]
gi|118423449|gb|ABK89839.1| 30S ribosomal protein S6 [Francisella novicida U112]
gi|134049737|gb|ABO46808.1| ribosomal protein S6 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134253510|gb|EBA52604.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
257]
gi|151568874|gb|EDN34528.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
FSC033]
gi|157122287|gb|EDO66427.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FSC022]
gi|187712532|gb|ACD30829.1| 30S ribosomal protein S6 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840949|gb|EET19385.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159353|gb|ADA78744.1| 30S ribosomal protein S6 [Francisella tularensis subsp. tularensis
NE061598]
Length = 111
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEVVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|15896955|ref|NP_350304.1| 30S ribosomal protein S6 [Clostridium acetobutylicum ATCC 824]
gi|24212323|sp|Q97CX2|RS6_CLOAB RecName: Full=30S ribosomal protein S6
gi|15026830|gb|AAK81644.1|AE007867_11 Ribosomal protein S6 [Clostridium acetobutylicum ATCC 824]
gi|325511132|gb|ADZ22768.1| 30S ribosomal protein S6 [Clostridium acetobutylicum EA 2018]
Length = 95
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L + + I + +++S+I GGEV V+ G R +AY I K + Y
Sbjct: 1 MNKYETLFILNPSLDEEGINTNVEKFKSVITNGGGEVENVDLWGKRKLAYEIDKVNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N S E+ R RI ++++R L + ++
Sbjct: 61 VLVNFQSDAQLPKELDRVFRISDSIIRHLIISLEK 95
>gi|253681311|ref|ZP_04862109.1| ribosomal protein S6 [Clostridium botulinum D str. 1873]
gi|253562549|gb|EES92000.1| ribosomal protein S6 [Clostridium botulinum D str. 1873]
Length = 95
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + + IK TI +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILQPSLEEEVIKATIEKFKGVIENEGGVVENVDEWGKRKLAYPINKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E++R RI + V+R + + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVVNPEK 95
>gi|88800241|ref|ZP_01115808.1| 30S ribosomal protein S6 [Reinekea sp. MED297]
gi|88776956|gb|EAR08164.1| 30S ribosomal protein S6 [Reinekea sp. MED297]
Length = 139
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S+Q+ + +Y +++ + GG V + G R +A+ I+ KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSEQVPAMVERYTTVVTDAGGTVHRNEDWGRRQLAFPIQDLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR------HDRDDRND 114
+ +N+ I ++K R ++ +LRSL + + ++ +
Sbjct: 60 ILLNVEVSDETIDDLKTTFRFNDAILRSLIMRRKDAVTESSPMMKSVEAKKAKEEAQAAA 119
Query: 115 RFPRDRNVDRKQHVS 129
R PR + + S
Sbjct: 120 RAPRTEEAETEAADS 134
>gi|168187293|ref|ZP_02621928.1| ribosomal protein S6 [Clostridium botulinum C str. Eklund]
gi|169294825|gb|EDS76958.1| ribosomal protein S6 [Clostridium botulinum C str. Eklund]
Length = 95
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + + K I +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILNPSLDEEATKAAIEKFKGVIEREGGVVENVDEWGRRKLAYPINKINEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E++R RI + V+R + + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVVNPEK 95
>gi|167754092|ref|ZP_02426219.1| hypothetical protein ALIPUT_02380 [Alistipes putredinis DSM 17216]
gi|167658717|gb|EDS02847.1| hypothetical protein ALIPUT_02380 [Alistipes putredinis DSM 17216]
Length = 114
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+K+ ++Q +I ENGG++ G++ +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVKEVADKFQGVITENGGQIVNSEAWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + ++ ++ + R DE ++R LT D + + + + +
Sbjct: 61 FLIEFTGEGSIVNTLETQYRRDERIIRFLTFKQDKFAVEYSEKRRAKLSNKQEE 114
>gi|291277459|ref|YP_003517231.1| putative 30S ribosomal protein S6 [Helicobacter mustelae 12198]
gi|290964653|emb|CBG40508.1| putative 30S ribosomal protein S6 [Helicobacter mustelae 12198]
Length = 139
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++I I Y+ I +NGG ++ ++GMR +AY I+KN++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIASKIEFYKEAITKNGGSIQTTLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP--- 117
+ + P+ + E++R RI+E+VLR + + +S ++ H DR ++ P
Sbjct: 61 FVIYFQANPSLVLELERLYRINEDVLRFIVIKYESKKEQKAW----HALVDRANKKPHAS 116
Query: 118 ------RDRNVDRKQHVSEEKPL 134
++ ++ +H SEE
Sbjct: 117 TSRPKSEEKTEEQAEHKSEEAAE 139
>gi|332184105|gb|AEE26359.1| SSU ribosomal protein S6p [Francisella cf. novicida 3523]
Length = 111
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+S+I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEVVLMIHPD-QSDQLDAMLGKYRSIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 109
>gi|160872394|ref|ZP_02062526.1| ribosomal protein S6 [Rickettsiella grylli]
gi|159121193|gb|EDP46531.1| ribosomal protein S6 [Rickettsiella grylli]
Length = 128
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y ++++ +GG+V + G R I + I K KA+Y
Sbjct: 1 MRHYEIVLLIHPD-QSDQVSAMVQRYTTIVKNSGGKVHRFEDWGRRQICFPINKLPKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ A+ E+ R ++ VLR L + VD + + + ++ R
Sbjct: 60 ILMNVECGKEAMAELTDNFRFNDAVLRQLIIKVDKAITGQSPLAKAKEVQAHENKREYSR 119
Query: 121 NVDRK 125
+ +
Sbjct: 120 ETEVE 124
>gi|300857398|ref|YP_003782382.1| 30S ribosomal protein S6 [Clostridium ljungdahlii DSM 13528]
gi|300437513|gb|ADK17280.1| 30S ribosomal protein S6 [Clostridium ljungdahlii DSM 13528]
Length = 95
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L+ + + K I +++ +I+ GG + V+ G R +AY I K + YY
Sbjct: 1 MSKYETIFILQPSLDEEACKANIEKFKGVIENGGGVIENVDVWGKRKLAYEINKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E+ R RI + V+R + + +
Sbjct: 61 TLINFNADPKLPKELDRVFRITDTVIRHIIVKDEK 95
>gi|71891874|ref|YP_277603.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|91207902|sp|Q493V5|RS6_BLOPB RecName: Full=30S ribosomal protein S6
gi|71795980|gb|AAZ40731.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 117
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D+S +QI I +Y +++ G+V + G R +AY + K KAYY
Sbjct: 1 MRYYEIVFMVHPDLS-EQISSIINRYTTIVTNAQGKVHRIENWGRRQLAYPVNKLCKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +NI + E+ ++N++RS+ + P+ +++ +
Sbjct: 60 VLLNIEVSQDTVKELNDDFHFNKNIIRSMIVRTKYAIVEPSPMMKKIEE 108
>gi|148244752|ref|YP_001219446.1| 30S ribosomal protein S6 [Candidatus Vesicomyosocius okutanii HA]
gi|166227401|sp|A5CWD9|RS6_VESOH RecName: Full=30S ribosomal protein S6
gi|146326579|dbj|BAF61722.1| 30S ribosomal protein S6 [Candidatus Vesicomyosocius okutanii HA]
Length = 113
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I +GG++ + G + +AY I+K KA+Y
Sbjct: 1 MRHYEITLIVHPD-QSAQVGTMMDKYKEIINADGGKIHKEEDWGRKHLAYPIKKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ MNI + ++ R ++ +LRSL + + +P++ + D++
Sbjct: 60 LMMNIECDQEMLDKLNYNFRFNDAILRSLIISKNKAITTPSIMMVNKDKEK 110
>gi|150019894|ref|YP_001312148.1| 30S ribosomal protein S6 [Clostridium beijerinckii NCIMB 8052]
gi|189045460|sp|A6M3L2|RS6_CLOB8 RecName: Full=30S ribosomal protein S6
gi|149906359|gb|ABR37192.1| ribosomal protein S6 [Clostridium beijerinckii NCIMB 8052]
Length = 95
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + +K I +++ +I+ GG V V+ G R +AY I K + +Y
Sbjct: 1 MRKYETIFILNPSFDEETVKANIEKFKGVIENGGGTVENVDFWGKRKLAYEISKVSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + P E+ R RI + V+R + +
Sbjct: 61 TLVNFTANPELPRELDRIFRITDGVIRHIIV 91
>gi|329114158|ref|ZP_08242920.1| 30S ribosomal protein S6 [Acetobacter pomorum DM001]
gi|326696234|gb|EGE47913.1| 30S ribosomal protein S6 [Acetobacter pomorum DM001]
Length = 160
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R DIS QQ+ + + I+ +GG VR G+R++AYRI+KNRK +Y
Sbjct: 8 MPLYETVLIARNDISQQQVDAILDGIAAQIEADGGAVRKREYWGLRSLAYRIKKNRKGHY 67
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ + + + E++R++ ++E+VLR LTL V+ +++P+ + R DDR DR
Sbjct: 68 ALLGLEARSELVKEIERQLALNEDVLRLLTLRVEEIDEAPSPVLSRKG-DDRGDRG 122
>gi|254454531|ref|ZP_05067968.1| ribosomal protein S6 [Octadecabacter antarcticus 238]
gi|198268937|gb|EDY93207.1| ribosomal protein S6 [Octadecabacter antarcticus 238]
Length = 111
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 70/100 (70%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+F+ RQD+S+ Q + I + +++ +N G+V + G++T+AY+I KNRK +Y F+
Sbjct: 1 MFIARQDLSNTQAEALIEHFSTVLSDNDGKVVMSEYWGVKTMAYKINKNRKGHYAFLRSD 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+P A+ EM+R MR+ E+V+R LT+ VD+HE+ P++ +Q+
Sbjct: 61 APAPAVQEMERLMRLHEDVMRILTIKVDAHEEGPSVQMQK 100
>gi|189463979|ref|ZP_03012764.1| hypothetical protein BACINT_00314 [Bacteroides intestinalis DSM
17393]
gi|224536024|ref|ZP_03676563.1| hypothetical protein BACCELL_00888 [Bacteroides cellulosilyticus
DSM 14838]
gi|189438552|gb|EDV07537.1| hypothetical protein BACINT_00314 [Bacteroides intestinalis DSM
17393]
gi|224522349|gb|EEF91454.1| hypothetical protein BACCELL_00888 [Bacteroides cellulosilyticus
DSM 14838]
Length = 114
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT D + + + D
Sbjct: 61 QLIEFNADPTVIDKLELNFRRDERVIRFLTFKQDKYAAEYAAKRRSVKSTKKED 114
>gi|258542089|ref|YP_003187522.1| 30S ribosomal protein S6 [Acetobacter pasteurianus IFO 3283-01]
gi|256633167|dbj|BAH99142.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-01]
gi|256636224|dbj|BAI02193.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-03]
gi|256639279|dbj|BAI05241.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-07]
gi|256642333|dbj|BAI08288.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-22]
gi|256645388|dbj|BAI11336.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-26]
gi|256648443|dbj|BAI14384.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-32]
gi|256651496|dbj|BAI17430.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654487|dbj|BAI20414.1| SSU ribosomal protein S6P [Acetobacter pasteurianus IFO 3283-12]
Length = 153
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R DIS QQ+ + + I+ +GG VR G+R++AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDISQQQVDAILDGIAAQIEADGGAVRKREYWGLRSLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ + + + E++R++ ++E+VLR +TL V+ +++P+ + R DDR DR
Sbjct: 61 ALLGLEARSELVKEIERQLALNEDVLRLMTLRVEEIDETPSPVLSRKG-DDRGDRG 115
>gi|115314808|ref|YP_763531.1| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
OSU18]
gi|115129707|gb|ABI82894.1| ribosomal protein S6 [Francisella tularensis subsp. holarctica
OSU18]
Length = 120
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y +I+E GG++ + G R +AY I K KA+Y
Sbjct: 10 MKHYEVVLMIHPD-QSDQLDAMLGKYCGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 69 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 118
>gi|34558168|ref|NP_907983.1| 30S ribosomal protein S6 [Wolinella succinogenes DSM 1740]
gi|61216265|sp|Q7MQZ8|RS6_WOLSU RecName: Full=30S ribosomal protein S6
gi|34483887|emb|CAE10883.1| HYPOTHETICAL PROTEIN-Ribosomal protein S6 [Wolinella succinogenes]
Length = 137
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I + I Y+ I +NGGE+ ++GMR +AY I KN++ YY
Sbjct: 1 MRHYETMFIVKPTLTPEEIVEKINFYKEAIIKNGGEICATQDMGMRNLAYEINKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL--TIQRHDRDDRNDRFPR 118
+ S P+ + E++R RI+E++LR + + +S ++ + + ++ +
Sbjct: 61 FVVYFKSAPSLVIELERLYRINEDILRFIVIKYESKKEQNAWNTMVDKVNKKAEAPKSAP 120
Query: 119 DRNVDRKQHVSEEKPLS 135
+ E P +
Sbjct: 121 VAAPETAPVAPEATPEA 137
>gi|110799639|ref|YP_697332.1| 30S ribosomal protein S6 [Clostridium perfringens ATCC 13124]
gi|110802528|ref|YP_699891.1| 30S ribosomal protein S6 [Clostridium perfringens SM101]
gi|24212304|sp|Q8XH43|RS6_CLOPE RecName: Full=30S ribosomal protein S6
gi|122958624|sp|Q0TM08|RS6_CLOP1 RecName: Full=30S ribosomal protein S6
gi|123145831|sp|Q0SPR6|RS6_CLOPS RecName: Full=30S ribosomal protein S6
gi|110674286|gb|ABG83273.1| 30S ribosomal protein S6 [Clostridium perfringens ATCC 13124]
gi|110683029|gb|ABG86399.1| 30S ribosomal protein S6 [Clostridium perfringens SM101]
Length = 95
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + + +K I +++ +I+ G V V+ G R +AY I K + YY
Sbjct: 1 MRKYETIFVAHPSLDEEAVKALIEKFKGVIENGNGTVDNVDFWGKRKLAYEIAKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N + P E+ R I + ++R + +
Sbjct: 61 TLINFTANPELPKELDRVFGITDGIIRHIIVK 92
>gi|146340286|ref|YP_001205334.1| 30S ribosomal protein S6 [Bradyrhizobium sp. ORS278]
gi|166226805|sp|A4YT77|RS6_BRASO RecName: Full=30S ribosomal protein S6
gi|146193092|emb|CAL77103.1| 30S ribosomal protein S6 [Bradyrhizobium sp. ORS278]
Length = 153
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 74/106 (69%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S+QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MPLYEHVFLARQDASTQQVEELTTQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ V+ E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVEELEEGPSAMMRK 106
>gi|296116663|ref|ZP_06835273.1| 30S ribosomal protein S6 [Gluconacetobacter hansenii ATCC 23769]
gi|295976875|gb|EFG83643.1| 30S ribosomal protein S6 [Gluconacetobacter hansenii ATCC 23769]
Length = 167
Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S QQ++ ++++ G ++ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDVSQQQVETIADGIATVLEAESGSIKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI-QRHDRDDRNDRFPR 118
+ + + + PAAI E++R++ ++E+VLR L L VD +++P++ + ++ D +R R P+
Sbjct: 61 MLLGLDATPAAIKEIERQLSLNEDVLRVLMLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|148381565|ref|YP_001256106.1| ribosomal protein S6 [Clostridium botulinum A str. ATCC 3502]
gi|153934321|ref|YP_001385942.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC
19397]
gi|153934983|ref|YP_001389349.1| 30S ribosomal protein S6 [Clostridium botulinum A str. Hall]
gi|166226821|sp|A7FZH1|RS6_CLOB1 RecName: Full=30S ribosomal protein S6
gi|166226822|sp|A5I801|RS6_CLOBH RecName: Full=30S ribosomal protein S6
gi|148291049|emb|CAL85186.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC 3502]
gi|152930365|gb|ABS35865.1| 30S ribosomal protein S6 [Clostridium botulinum A str. ATCC
19397]
gi|152930897|gb|ABS36396.1| 30S ribosomal protein S6 [Clostridium botulinum A str. Hall]
Length = 94
Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPTLDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + E+ R RI + V+R + + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMIITQE 94
>gi|169656606|ref|YP_001428513.2| 30S ribosomal protein S6 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|164551674|gb|ABU61557.2| ribosomal protein S6 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 120
Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 10 MKHYEVVLMIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI P ++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 69 VLFNIECPTESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 118
>gi|18311624|ref|NP_563558.1| 30S ribosomal protein S6 [Clostridium perfringens str. 13]
gi|169343464|ref|ZP_02864464.1| ribosomal protein S6 [Clostridium perfringens C str. JGS1495]
gi|170764006|ref|ZP_02900189.1| ribosomal protein S6 [Clostridium perfringens B str. ATCC 3626]
gi|170764180|ref|ZP_02900237.1| ribosomal protein S6 [Clostridium perfringens E str. JGS1987]
gi|170764288|ref|ZP_02900252.1| ribosomal protein S6 [Clostridium perfringens CPE str. F4969]
gi|182420538|ref|ZP_02951674.1| ribosomal protein S6 [Clostridium perfringens NCTC 8239]
gi|182626414|ref|ZP_02954167.1| ribosomal protein S6 [Clostridium perfringens D str. JGS1721]
gi|18146308|dbj|BAB82348.1| 30S ribosomal protein S6 [Clostridium perfringens str. 13]
gi|169298416|gb|EDS80505.1| ribosomal protein S6 [Clostridium perfringens C str. JGS1495]
gi|170660921|gb|EDT13604.1| ribosomal protein S6 [Clostridium perfringens E str. JGS1987]
gi|170710436|gb|EDT22618.1| ribosomal protein S6 [Clostridium perfringens B str. ATCC 3626]
gi|170713733|gb|EDT25915.1| ribosomal protein S6 [Clostridium perfringens CPE str. F4969]
gi|177908288|gb|EDT70841.1| ribosomal protein S6 [Clostridium perfringens D str. JGS1721]
gi|182379946|gb|EDT77425.1| ribosomal protein S6 [Clostridium perfringens NCTC 8239]
Length = 96
Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + + +K I +++ +I+ G V V+ G R +AY I K + YY
Sbjct: 2 MRKYETIFVAHPSLDEEAVKALIEKFKGVIENGNGTVDNVDFWGKRKLAYEIAKVNEGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N + P E+ R I + ++R + +
Sbjct: 62 TLINFTANPELPKELDRVFGITDGIIRHIIVK 93
>gi|313159261|gb|EFR58630.1| ribosomal protein S6 [Alistipes sp. HGB5]
Length = 114
Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ +S Q+++ ++Q +I ENGG++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFIVTPVLSDAQVQEVADKFQGVITENGGQIVNKESWGLRKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+ I+ ++ + R DE ++R LT D +
Sbjct: 61 FLVEFTGEGMLINTLETQYRRDERIIRFLTFKQDKFAVEYS 101
>gi|27379190|ref|NP_770719.1| 30S ribosomal protein S6 [Bradyrhizobium japonicum USDA 110]
gi|32171527|sp|Q89MW3|RS6_BRAJA RecName: Full=30S ribosomal protein S6
gi|27352341|dbj|BAC49344.1| 30S ribosomal protein S6 [Bradyrhizobium japonicum USDA 110]
Length = 166
Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 73/106 (68%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD S QQ+++ Q +++ GG+V G+R++ YR+ KNRKA++
Sbjct: 1 MALYEHVFLARQDASPQQVEELTAQMTGIVEGLGGKVTKTENWGVRSLTYRMNKNRKAHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V +NI +P AAI E++R+ RI E+V+R L++ V+ E+ P+ +++
Sbjct: 61 VLLNIDAPSAAIAEIERQERISEDVIRYLSVRVEELEEGPSAMMRK 106
>gi|269468494|gb|EEZ80152.1| ribosomal protein S6 [uncultured SUP05 cluster bacterium]
Length = 115
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ + +Y+ +I +GG + + G + +AY I K KA+Y
Sbjct: 1 MRHYEIALIVHPD-QSAQVGTMMDKYKEMITADGGNIHREEDWGRKHLAYPIDKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ MNI + ++ R ++ VLR+L + + P++ + D D + R
Sbjct: 60 LMMNIECGQETLDKLNYNFRFNDAVLRNLIISKKTAITEPSIMMTAKDEDKKPVRR 115
>gi|187777388|ref|ZP_02993861.1| hypothetical protein CLOSPO_00944 [Clostridium sporogenes ATCC
15579]
gi|187774316|gb|EDU38118.1| hypothetical protein CLOSPO_00944 [Clostridium sporogenes ATCC
15579]
Length = 94
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + E+ R RI ++V+R + + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDSVIRHMIITQE 94
>gi|322379728|ref|ZP_08054041.1| 30S ribosomal protein S6 [Helicobacter suis HS5]
gi|321147877|gb|EFX42464.1| 30S ribosomal protein S6 [Helicobacter suis HS5]
Length = 135
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 62/103 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IKD + YQ +I ++GGEV ++G R +AY I+K+++ YY
Sbjct: 1 MKHYETMFILKPTLVEEEIKDKLAFYQEVITKSGGEVVNTLDMGHRNLAYEIQKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + + E++R RI+E++LR + L +S ++
Sbjct: 61 FVIYFTAHADVVLELERLYRINEDILRFMILKYESKKEQKAWQ 103
>gi|282877914|ref|ZP_06286723.1| ribosomal protein S6 [Prevotella buccalis ATCC 35310]
gi|281299915|gb|EFA92275.1| ribosomal protein S6 [Prevotella buccalis ATCC 35310]
Length = 114
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ GM+ +AY+I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGMKKLAYQIQKKNSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
P + ++ R DE V+R +T+ +D + L ++
Sbjct: 61 CLFEFKGEPTLVQTLETGFRRDEKVIRYMTVKLDKYAAEYALKRKQK 107
>gi|52841822|ref|YP_095621.1| 30S ribosomal protein S6 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54294364|ref|YP_126779.1| 30S ribosomal protein S6 [Legionella pneumophila str. Lens]
gi|54297505|ref|YP_123874.1| 30S ribosomal protein S6 [Legionella pneumophila str. Paris]
gi|148359129|ref|YP_001250336.1| 30S ribosomal protein S6 [Legionella pneumophila str. Corby]
gi|296107177|ref|YP_003618877.1| rpsF 30S ribosomal protein S6 [Legionella pneumophila 2300/99
Alcoy]
gi|61215400|sp|Q5WWM0|RS6_LEGPL RecName: Full=30S ribosomal protein S6
gi|61215408|sp|Q5X4X0|RS6_LEGPA RecName: Full=30S ribosomal protein S6
gi|61215428|sp|Q5ZV48|RS6_LEGPH RecName: Full=30S ribosomal protein S6
gi|166226977|sp|A5IC90|RS6_LEGPC RecName: Full=30S ribosomal protein S6
gi|52628933|gb|AAU27674.1| 30S ribosomal protein S6 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|53751290|emb|CAH12701.1| 30S ribosomal protein S6 [Legionella pneumophila str. Paris]
gi|53754196|emb|CAH15673.1| 30S ribosomal protein S6 [Legionella pneumophila str. Lens]
gi|148280902|gb|ABQ54990.1| 30S ribosomal protein S6 [Legionella pneumophila str. Corby]
gi|295649078|gb|ADG24925.1| rpsF 30S ribosomal protein S6 [Legionella pneumophila 2300/99
Alcoy]
gi|307610292|emb|CBW99856.1| 30S ribosomal protein S6 [Legionella pneumophila 130b]
Length = 112
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y+ +I ++ G++ +LG R +AY I K KA+Y
Sbjct: 1 MRHYEIMFLVHPD-QSEQVPGMVERYEGIITKHNGKIHRKEDLGRRQLAYSINKVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ MN+ A++E+K + ++ +LR L + + ++ +++
Sbjct: 60 ILMNVECNLDALNEIKNAFKFNDAILRHLITVQKQAITTESVLMKKEKETK 110
>gi|83945281|ref|ZP_00957630.1| 30S ribosomal protein S6 [Oceanicaulis alexandrii HTCC2633]
gi|83851451|gb|EAP89307.1| 30S ribosomal protein S6 [Oceanicaulis alexandrii HTCC2633]
Length = 116
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEHVF+ R D+S Q++ I + ++LI+E GG+V G+RT+AYR+ KNRK +Y
Sbjct: 1 MNKYEHVFIARPDVSPAQVESAIEELKALIEEKGGKVHKTEYWGLRTLAYRMNKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
++++ + + + + R ++V+R +T VD + P+ +++ + R +R
Sbjct: 61 GYLDMEAGNEVLEALDYRQRFADDVMRYMTCRVDELNEEPSAVLRKGEDRKRRERR 116
>gi|284006635|emb|CBA71896.1| 30S ribosomal protein S6 [Arsenophonus nasoniae]
Length = 122
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y I E G++ + + G R +AY I K KA+YV MN+ +P
Sbjct: 1 MVHPD-QSEQVAGMIERYSGSITEAQGQIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHV 128
I E++ R ++ V+RS+ + V + ++ D D D
Sbjct: 60 QEVIDELETNFRFNDAVVRSMIMRVKHAVTEASPMVKAKDDRRSRDLVDEDLEGIEGAED 119
Query: 129 SEE 131
SEE
Sbjct: 120 SEE 122
>gi|40062774|gb|AAR37668.1| ribosomal protein S6 [uncultured marine bacterium 439]
Length = 117
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ D S Q+ I +Y+ +I +GG V + G + +AY I K KA+Y
Sbjct: 1 MRHYEITLIVHPD-QSSQVTTMIEKYKEIITTSGGNVHREEDWGRKHLAYPINKIYKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ MNI + ++ R ++ +LR+L + +P++ I + D
Sbjct: 60 LMMNIECDQETLDKLNYNFRFNDAILRNLIISKSEAITTPSIMIANSEEDK 110
>gi|262369756|ref|ZP_06063084.1| 30S ribosomal protein S6 [Acinetobacter johnsonii SH046]
gi|262315824|gb|EEY96863.1| 30S ribosomal protein S6 [Acinetobacter johnsonii SH046]
Length = 128
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++RSL + ++ +L + + ++ R +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRSLIIRRENAITEESLLAKSAE--EKRARKAQRE 117
Query: 121 NVDRKQHVSE 130
+ Q +E
Sbjct: 118 EAQQAQDSAE 127
>gi|331268204|ref|YP_004394696.1| 30S ribosomal protein S6 [Clostridium botulinum BKT015925]
gi|329124754|gb|AEB74699.1| ribosomal protein S6 [Clostridium botulinum BKT015925]
Length = 95
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + + IK TI +++ +I+ GG V V+E G R +AY I K + YY
Sbjct: 1 MRNYETLFILQTSLEEEAIKATIEKFKGVIENEGGVVENVDEWGKRKLAYPINKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E++R RI + V+R + + +
Sbjct: 61 TLINFKANPELPRELERVFRITDGVMRFMVVNPEK 95
>gi|153808731|ref|ZP_01961399.1| hypothetical protein BACCAC_03030 [Bacteroides caccae ATCC 43185]
gi|255691415|ref|ZP_05415090.1| ribosomal protein S6 [Bacteroides finegoldii DSM 17565]
gi|149128557|gb|EDM19775.1| hypothetical protein BACCAC_03030 [Bacteroides caccae ATCC 43185]
gi|260623061|gb|EEX45932.1| ribosomal protein S6 [Bacteroides finegoldii DSM 17565]
Length = 114
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + + D
Sbjct: 61 QLIEFNADPTVIDKLEVNFRRDERVIRFLTFKMDKYAAEYAAKRRSVKSNKKED 114
>gi|260174163|ref|ZP_05760575.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
gi|299147872|ref|ZP_07040935.1| ribosomal protein S6 [Bacteroides sp. 3_1_23]
gi|315922428|ref|ZP_07918668.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
gi|298514055|gb|EFI37941.1| ribosomal protein S6 [Bacteroides sp. 3_1_23]
gi|313696303|gb|EFS33138.1| 30S ribosomal protein S6 [Bacteroides sp. D2]
Length = 114
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGVLQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + + D
Sbjct: 61 QLIEFNADPTVIDKLELNFRRDERVIRFLTFKMDKYAAEYAAKRRSVKSNKKED 114
>gi|190575041|ref|YP_001972886.1| 30S ribosomal protein S6 [Stenotrophomonas maltophilia K279a]
gi|190012963|emb|CAQ46595.1| 30s ribosomal protein S6 [Stenotrophomonas maltophilia K279a]
Length = 136
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y+SL++ G + + + G R +AY I+ KA+YV MNI +
Sbjct: 1 MVHPD-QSEQVPAMIERYKSLVENGNGTIHRLEDWGRRQLAYPIQNLVKAHYVLMNIEAD 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 60 QAVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDKP 105
>gi|150010520|ref|YP_001305263.1| 30S ribosomal protein S6 [Parabacteroides distasonis ATCC 8503]
gi|256842193|ref|ZP_05547697.1| ribosomal protein S6 [Parabacteroides sp. D13]
gi|262384880|ref|ZP_06078012.1| ribosomal protein S6 [Bacteroides sp. 2_1_33B]
gi|298377640|ref|ZP_06987591.1| ribosomal protein S6 [Bacteroides sp. 3_1_19]
gi|301308938|ref|ZP_07214883.1| ribosomal protein S6 [Bacteroides sp. 20_3]
gi|166227359|sp|A6LIX7|RS6_PARD8 RecName: Full=30S ribosomal protein S6
gi|149938944|gb|ABR45641.1| ribosomal protein S6 [Parabacteroides distasonis ATCC 8503]
gi|256736077|gb|EEU49407.1| ribosomal protein S6 [Parabacteroides sp. D13]
gi|262293596|gb|EEY81532.1| ribosomal protein S6 [Bacteroides sp. 2_1_33B]
gi|298265343|gb|EFI07005.1| ribosomal protein S6 [Bacteroides sp. 3_1_19]
gi|300832964|gb|EFK63589.1| ribosomal protein S6 [Bacteroides sp. 20_3]
Length = 118
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ +L++ G E+ G+R +AY I K +Y
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKAQGAEIVNEENWGLRKLAYPIDKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ + P+ I ++ R DE V+R LT D + +
Sbjct: 61 QLVEFKADPSVIATLELNFRRDERVIRFLTFRQDKYAAEYAAKRR 105
>gi|169633238|ref|YP_001706974.1| 30S ribosomal protein S6 [Acinetobacter baumannii SDF]
gi|169795504|ref|YP_001713297.1| 30S ribosomal protein S6 [Acinetobacter baumannii AYE]
gi|213158556|ref|YP_002319854.1| ribosomal protein S6 [Acinetobacter baumannii AB0057]
gi|215482991|ref|YP_002325196.1| ribosomal protein S6 [Acinetobacter baumannii AB307-0294]
gi|229577093|ref|YP_001085200.2| 30S ribosomal protein S6 [Acinetobacter baumannii ATCC 17978]
gi|239501438|ref|ZP_04660748.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB900]
gi|260554566|ref|ZP_05826787.1| ribosomal protein S6 [Acinetobacter baumannii ATCC 19606]
gi|301345098|ref|ZP_07225839.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB056]
gi|301510830|ref|ZP_07236067.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB058]
gi|301595325|ref|ZP_07240333.1| 30S ribosomal protein S6 [Acinetobacter baumannii AB059]
gi|332850733|ref|ZP_08432980.1| ribosomal protein S6 [Acinetobacter baumannii 6013150]
gi|332866956|ref|ZP_08437282.1| ribosomal protein S6 [Acinetobacter baumannii 6013113]
gi|332873686|ref|ZP_08441629.1| ribosomal protein S6 [Acinetobacter baumannii 6014059]
gi|226703405|sp|B7H0K0|RS6_ACIB3 RecName: Full=30S ribosomal protein S6
gi|226703406|sp|B7IBC1|RS6_ACIB5 RecName: Full=30S ribosomal protein S6
gi|226703407|sp|B0VM10|RS6_ACIBS RecName: Full=30S ribosomal protein S6
gi|226703408|sp|B0V7G7|RS6_ACIBY RecName: Full=30S ribosomal protein S6
gi|226703588|sp|A3M6Q4|RS6_ACIBT RecName: Full=30S ribosomal protein S6
gi|169148431|emb|CAM86297.1| 30S ribosomal protein S6 [Acinetobacter baumannii AYE]
gi|169152030|emb|CAP00910.1| 30S ribosomal protein S6 [Acinetobacter baumannii]
gi|193077740|gb|ABO12598.2| 30S ribosomal protein S6 [Acinetobacter baumannii ATCC 17978]
gi|213057716|gb|ACJ42618.1| ribosomal protein S6 [Acinetobacter baumannii AB0057]
gi|213987725|gb|ACJ58024.1| ribosomal protein S6 [Acinetobacter baumannii AB307-0294]
gi|260411108|gb|EEX04405.1| ribosomal protein S6 [Acinetobacter baumannii ATCC 19606]
gi|322507496|gb|ADX02950.1| rpsF [Acinetobacter baumannii 1656-2]
gi|323518608|gb|ADX92989.1| 30S ribosomal protein S6 [Acinetobacter baumannii TCDC-AB0715]
gi|332730570|gb|EGJ61886.1| ribosomal protein S6 [Acinetobacter baumannii 6013150]
gi|332734337|gb|EGJ65464.1| ribosomal protein S6 [Acinetobacter baumannii 6013113]
gi|332738074|gb|EGJ68958.1| ribosomal protein S6 [Acinetobacter baumannii 6014059]
Length = 127
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + + E++ R ++ ++R+L + + +L + + + R + R+
Sbjct: 60 ILMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
Q
Sbjct: 119 AQQVAQEAE 127
>gi|153941470|ref|YP_001392984.1| 30S ribosomal protein S6 [Clostridium botulinum F str. Langeland]
gi|168181095|ref|ZP_02615759.1| ribosomal protein S6 [Clostridium botulinum NCTC 2916]
gi|170755574|ref|YP_001783263.1| 30S ribosomal protein S6 [Clostridium botulinum B1 str. Okra]
gi|226951080|ref|YP_002806171.1| ribosomal protein S6 [Clostridium botulinum A2 str. Kyoto]
gi|166226823|sp|A7GJM4|RS6_CLOBL RecName: Full=30S ribosomal protein S6
gi|226703442|sp|B1IHQ4|RS6_CLOBK RecName: Full=30S ribosomal protein S6
gi|254765230|sp|C1FP16|RS6_CLOBJ RecName: Full=30S ribosomal protein S6
gi|152937366|gb|ABS42864.1| 30S ribosomal protein S6 [Clostridium botulinum F str. Langeland]
gi|169120786|gb|ACA44622.1| 30S ribosomal protein S6 [Clostridium botulinum B1 str. Okra]
gi|182668139|gb|EDT80118.1| ribosomal protein S6 [Clostridium botulinum NCTC 2916]
gi|226843146|gb|ACO85812.1| ribosomal protein S6 [Clostridium botulinum A2 str. Kyoto]
gi|295320959|gb|ADG01337.1| 30S ribosomal protein S6 [Clostridium botulinum F str. 230613]
gi|322807952|emb|CBZ05527.1| SSU ribosomal protein S6p [Clostridium botulinum H04402 065]
Length = 94
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + E+ R RI + V+R + + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMIITQE 94
>gi|29347573|ref|NP_811076.1| 30S ribosomal protein S6 [Bacteroides thetaiotaomicron VPI-5482]
gi|253572033|ref|ZP_04849437.1| 30S ribosomal protein S6 [Bacteroides sp. 1_1_6]
gi|298383734|ref|ZP_06993295.1| ribosomal protein S6 [Bacteroides sp. 1_1_14]
gi|32171532|sp|Q8A5S5|RS6_BACTN RecName: Full=30S ribosomal protein S6
gi|29339474|gb|AAO77270.1| 30S ribosomal protein S6 [Bacteroides thetaiotaomicron VPI-5482]
gi|251838213|gb|EES66300.1| 30S ribosomal protein S6 [Bacteroides sp. 1_1_6]
gi|298263338|gb|EFI06201.1| ribosomal protein S6 [Bacteroides sp. 1_1_14]
Length = 114
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + + D
Sbjct: 61 QLVEFNADPTVIDKLELNFRRDERVIRFLTFKMDKYAAEYAAKRRSVKSNKKED 114
>gi|218128602|ref|ZP_03457406.1| hypothetical protein BACEGG_00172 [Bacteroides eggerthii DSM 20697]
gi|317475594|ref|ZP_07934856.1| ribosomal protein S6 [Bacteroides eggerthii 1_2_48FAA]
gi|329957653|ref|ZP_08298128.1| ribosomal protein S6 [Bacteroides clarus YIT 12056]
gi|329960226|ref|ZP_08298668.1| ribosomal protein S6 [Bacteroides fluxus YIT 12057]
gi|217989204|gb|EEC55518.1| hypothetical protein BACEGG_00172 [Bacteroides eggerthii DSM 20697]
gi|316908298|gb|EFV29990.1| ribosomal protein S6 [Bacteroides eggerthii 1_2_48FAA]
gi|328522530|gb|EGF49639.1| ribosomal protein S6 [Bacteroides clarus YIT 12056]
gi|328532899|gb|EGF59676.1| ribosomal protein S6 [Bacteroides fluxus YIT 12057]
Length = 114
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT D + + + D
Sbjct: 61 QLIEFNAEPTVIEKLELNFRRDERVIRFLTFKQDKYAAEYAAKRRSVKSTKKED 114
>gi|170761522|ref|YP_001788970.1| 30S ribosomal protein S6 [Clostridium botulinum A3 str. Loch
Maree]
gi|226703443|sp|B1KU97|RS6_CLOBM RecName: Full=30S ribosomal protein S6
gi|169408511|gb|ACA56922.1| 30S ribosomal protein S6 [Clostridium botulinum A3 str. Loch
Maree]
Length = 94
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++ +I+ +GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKGVIENSGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + E+ R RI + V+R + + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMIITQE 94
>gi|53757419|gb|AAU91710.1| ribosomal protein S6 [Methylococcus capsulatus str. Bath]
Length = 128
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S Q+ I +Y+S+I+ G + + + G R +AY I K KA+YV MNI
Sbjct: 1 MVHPD-QSGQVPAMIERYRSIIEGAAGRIHRLEDWGRRQLAYPIAKLHKAHYVLMNIECD 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
A + E++ R ++ VLRSLT+ D P+ + D DR P D
Sbjct: 60 QATLEELESGFRFNDAVLRSLTIRRDEAVTEPSALARSGS-DAEADRAPADEG 111
>gi|330993921|ref|ZP_08317851.1| 30S ribosomal protein S6 [Gluconacetobacter sp. SXCC-1]
gi|329758867|gb|EGG75381.1| 30S ribosomal protein S6 [Gluconacetobacter sp. SXCC-1]
Length = 161
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R D+S QQ++ + ++ G V+ G+RT+AYRI+KNRK +Y
Sbjct: 1 MPLYETVLIARNDVSQQQVEAIADGIATYLEAESGSVKKREYWGLRTLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI-QRHDRDDRNDRFPR 118
+ + + + AAI E++R++ ++E+VLR LTL VD +++P++ + ++ D +R R P+
Sbjct: 61 MLLGLDASSAAIKEIERQLSLNEDVLRVLTLRVDEIDEAPSVILSRKGDERERGFRGPK 119
>gi|262375304|ref|ZP_06068537.1| ribosomal protein S6 [Acinetobacter lwoffii SH145]
gi|262309558|gb|EEY90688.1| ribosomal protein S6 [Acinetobacter lwoffii SH145]
Length = 128
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++RSL + ++ +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRSLIIRRENAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 N 121
Sbjct: 119 A 119
>gi|237750843|ref|ZP_04581323.1| ribosomal protein S6 [Helicobacter bilis ATCC 43879]
gi|229373288|gb|EEO23679.1| ribosomal protein S6 [Helicobacter bilis ATCC 43879]
Length = 145
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+L+ + ++IK I ++ +I +NGG + ++GMR +AY+I+KN + YY
Sbjct: 1 MRHYETAFVLKPTLVEEEIKAKIDFFKEVILKNGGHIETCLDMGMRNLAYQIKKNSRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT-----IQRHDR------ 109
+ + P I E++R I+E VLR + + +S ++ ++ ++
Sbjct: 61 FCIYFKADPTLIAELERLYGINEEVLRFIVIKYESKKEQEAWKTLVERAKKPEKPRTLKK 120
Query: 110 -DDRNDRFPRDRNVDRKQHVSE 130
+DR +R P+ NV ++ S+
Sbjct: 121 DEDRAERTPKKENVQNEEQSSQ 142
>gi|319899908|ref|YP_004159636.1| SSU ribosomal protein S6P [Bacteroides helcogenes P 36-108]
gi|319414939|gb|ADV42050.1| SSU ribosomal protein S6P [Bacteroides helcogenes P 36-108]
Length = 114
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTSEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT D + + + D
Sbjct: 61 QLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKYAAEYAAKRRSVKSTKKED 114
>gi|282880328|ref|ZP_06289042.1| ribosomal protein S6 [Prevotella timonensis CRIS 5C-B1]
gi|281305830|gb|EFA97876.1| ribosomal protein S6 [Prevotella timonensis CRIS 5C-B1]
Length = 114
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ G++ +AY+I+K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKETVAKFKTLLTDNGAEILNEEAWGLKKLAYQIQKKNSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P + ++ R DE V+R +T+ +D +
Sbjct: 61 CLFEFKGEPTLVDTLEIGFRRDEKVIRFMTVKLDKY 96
>gi|302877155|ref|YP_003845788.1| 30S ribosomal protein S6 [Clostridium cellulovorans 743B]
gi|307687854|ref|ZP_07630300.1| 30S ribosomal protein S6 [Clostridium cellulovorans 743B]
gi|302580012|gb|ADL54024.1| ribosomal protein S6 [Clostridium cellulovorans 743B]
Length = 95
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+ + + K I +++ +I+ GG V V+ G R +AY I K + +Y
Sbjct: 1 MNKYETLFIQNPSLDEEATKANIEKFKGIIENGGGTVENVDVWGRRKLAYEIAKVNEGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N +S E+ R RI + ++R + + ++
Sbjct: 61 TLINFSSDAQLPKELDRVFRITDGIIRHIIVNLEK 95
>gi|254510771|ref|ZP_05122838.1| ribosomal protein S6 [Rhodobacteraceae bacterium KLH11]
gi|221534482|gb|EEE37470.1| ribosomal protein S6 [Rhodobacteraceae bacterium KLH11]
Length = 110
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 65/99 (65%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+ RQD+S+ Q + + + +++ +NGG V G++T+AY+I KNRK +Y F+ +
Sbjct: 1 MIARQDLSNAQAESLVEHFGTVLADNGGNVVDSEYWGVKTMAYKINKNRKGHYSFLKTDA 60
Query: 68 PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
P A+ EM+R MR+ ++V+R LT+ VD H + P++ +Q+
Sbjct: 61 PAGAVQEMERLMRLHDDVMRVLTIKVDEHAEGPSVQMQK 99
>gi|315587137|gb|ADU41518.1| 30S ribosomal protein S6 [Helicobacter pylori 35A]
gi|332674049|gb|AEE70866.1| 30S ribosomal protein S6 [Helicobacter pylori 83]
Length = 158
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 17 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 76
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 77 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 136
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 137 EKTEHTHSHHTEEAESVGSHSE 158
>gi|260549408|ref|ZP_05823627.1| ribosomal protein S6 [Acinetobacter sp. RUH2624]
gi|260407517|gb|EEX00991.1| ribosomal protein S6 [Acinetobacter sp. RUH2624]
Length = 127
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R+L + + +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
Q
Sbjct: 119 AQQVAQEAE 127
>gi|241668462|ref|ZP_04756040.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876996|ref|ZP_05249706.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843017|gb|EET21431.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 111
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S+Q+ + +Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSEQLDAMLSKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V NI ++ +++ ++ ++ VLR L + P++ ++ ++++
Sbjct: 60 VLFNIECDVESLEKLQENLKYNDAVLRRLVISKKEAVTEPSIMMETNEKE 109
>gi|168183706|ref|ZP_02618370.1| 30S ribosomal protein S6 [Clostridium botulinum Bf]
gi|237797085|ref|YP_002864637.1| 30S ribosomal protein S6 [Clostridium botulinum Ba4 str. 657]
gi|259495327|sp|C3KWI0|RS6_CLOB6 RecName: Full=30S ribosomal protein S6
gi|182673234|gb|EDT85195.1| 30S ribosomal protein S6 [Clostridium botulinum Bf]
gi|229262336|gb|ACQ53369.1| 30S ribosomal protein S6 [Clostridium botulinum Ba4 str. 657]
Length = 94
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L + + K + +++S+I+ GG V V+ G R +AY ++K + YY
Sbjct: 1 MRKYETVFILNPALDEEGYKANVEKFKSVIENAGGTVDNVDLWGKRKLAYEVKKVSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
MN + E+ R RI + V+R + + +
Sbjct: 61 TLMNFTADTELPKELDRVFRITDTVIRHMIITQE 94
>gi|53715146|ref|YP_101138.1| 30S ribosomal protein S6 [Bacteroides fragilis YCH46]
gi|60683082|ref|YP_213226.1| 30S ribosomal protein S6 [Bacteroides fragilis NCTC 9343]
gi|253566276|ref|ZP_04843730.1| 30S ribosomal protein S6 [Bacteroides sp. 3_2_5]
gi|255011272|ref|ZP_05283398.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
gi|265766976|ref|ZP_06094805.1| ribosomal protein S6 [Bacteroides sp. 2_1_16]
gi|313149084|ref|ZP_07811277.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
gi|61215472|sp|Q64PH7|RS6_BACFR RecName: Full=30S ribosomal protein S6
gi|81313864|sp|Q5L9B5|RS6_BACFN RecName: Full=30S ribosomal protein S6
gi|52218011|dbj|BAD50604.1| 30S ribosomal protein S6 [Bacteroides fragilis YCH46]
gi|60494516|emb|CAH09313.1| putative 30S ribosomal protein S6 [Bacteroides fragilis NCTC 9343]
gi|251945380|gb|EES85818.1| 30S ribosomal protein S6 [Bacteroides sp. 3_2_5]
gi|263253353|gb|EEZ24829.1| ribosomal protein S6 [Bacteroides sp. 2_1_16]
gi|301164597|emb|CBW24156.1| putative 30S ribosomal protein S6 [Bacteroides fragilis 638R]
gi|313137851|gb|EFR55211.1| 30S ribosomal protein S6 [Bacteroides fragilis 3_1_12]
Length = 114
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + + D
Sbjct: 61 QLIEFNAEPTVIDKLELNFRRDERVIRFLTFRMDKYAAEYAAKRRSVKSNKKED 114
>gi|123969448|ref|YP_001010306.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. AS9601]
gi|123199558|gb|ABM71199.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. AS9601]
Length = 174
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 29 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 88
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R +T+ + +P + + + + ND N D
Sbjct: 89 SHQGDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSNKSTSQSENND------NPD 142
Query: 124 RKQHVSEEKPLS 135
K E++P++
Sbjct: 143 AKVESKEKQPVA 154
>gi|260063157|ref|YP_003196237.1| 30S ribosomal protein S6 [Robiginitalea biformata HTCC2501]
gi|88783251|gb|EAR14423.1| 30S ribosomal protein S6 [Robiginitalea biformata HTCC2501]
Length = 112
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ ++++ + +NG ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIEETVKKFENFLTKNGAKMVSKEDWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+P I +++ + DE ++R LT+ +D H + +R ++
Sbjct: 61 HLFEFTAPGEVIGPYEQEFKRDERIMRFLTVKLDKH--AVAWAEKRRNK 107
>gi|157165390|ref|YP_001467164.1| 30S ribosomal protein S6 [Campylobacter concisus 13826]
gi|166226813|sp|A7ZEF6|RS6_CAMC1 RecName: Full=30S ribosomal protein S6
gi|112801440|gb|EAT98784.1| ribosomal protein S6 [Campylobacter concisus 13826]
Length = 139
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++K + + +I +NGGE+ V E+G R +AY I+K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVKAKVDFVKEVITKNGGEIATVIEMGTRKLAYTIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL---------TIQRHDRDD 111
+ +PPA + E+ R +RI E+++R L++ ++ + TI++ R+
Sbjct: 61 FVIYYKAPPALLAELTRNVRITEDIIRFLSVKYENKREIAAWERLCKGIKQTIKKEPREP 120
Query: 112 RNDRFPRDRNVDRKQHVSE 130
R R PR VD + E
Sbjct: 121 RAPREPRVEKVDEQTFTEE 139
>gi|160885185|ref|ZP_02066188.1| hypothetical protein BACOVA_03183 [Bacteroides ovatus ATCC 8483]
gi|237714854|ref|ZP_04545335.1| 30S ribosomal protein S6 [Bacteroides sp. D1]
gi|237719992|ref|ZP_04550473.1| 30S ribosomal protein S6 [Bacteroides sp. 2_2_4]
gi|262406875|ref|ZP_06083424.1| ribosomal protein S6 [Bacteroides sp. 2_1_22]
gi|293368835|ref|ZP_06615439.1| ribosomal protein S6 [Bacteroides ovatus SD CMC 3f]
gi|294647157|ref|ZP_06724756.1| ribosomal protein S6 [Bacteroides ovatus SD CC 2a]
gi|294809232|ref|ZP_06767948.1| ribosomal protein S6 [Bacteroides xylanisolvens SD CC 1b]
gi|298483613|ref|ZP_07001788.1| ribosomal protein S6 [Bacteroides sp. D22]
gi|156109535|gb|EDO11280.1| hypothetical protein BACOVA_03183 [Bacteroides ovatus ATCC 8483]
gi|229445179|gb|EEO50970.1| 30S ribosomal protein S6 [Bacteroides sp. D1]
gi|229450544|gb|EEO56335.1| 30S ribosomal protein S6 [Bacteroides sp. 2_2_4]
gi|262355578|gb|EEZ04669.1| ribosomal protein S6 [Bacteroides sp. 2_1_22]
gi|292636140|gb|EFF54628.1| ribosomal protein S6 [Bacteroides ovatus SD CMC 3f]
gi|292637444|gb|EFF55863.1| ribosomal protein S6 [Bacteroides ovatus SD CC 2a]
gi|294443626|gb|EFG12377.1| ribosomal protein S6 [Bacteroides xylanisolvens SD CC 1b]
gi|295084749|emb|CBK66272.1| SSU ribosomal protein S6P [Bacteroides xylanisolvens XB1A]
gi|298270183|gb|EFI11769.1| ribosomal protein S6 [Bacteroides sp. D22]
Length = 114
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGVLQAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + + D
Sbjct: 61 QLIEFNADPTVIDKLEINFRRDERVIRFLTFKMDKYAAEYAAKRRSVKSNKKED 114
>gi|313887203|ref|ZP_07820899.1| ribosomal protein S6 [Porphyromonas asaccharolytica PR426713P-I]
gi|332300446|ref|YP_004442367.1| 30S ribosomal protein S6 [Porphyromonas asaccharolytica DSM
20707]
gi|312923432|gb|EFR34245.1| ribosomal protein S6 [Porphyromonas asaccharolytica PR426713P-I]
gi|332177509|gb|AEE13199.1| 30S ribosomal protein S6 [Porphyromonas asaccharolytica DSM
20707]
Length = 115
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ S + G + G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDAQMKEAVDKFTSHLTSAGATIVNDEHWGLKKLAYPIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + P+ I + +R DE VLR LT+ D
Sbjct: 61 HFIEFDAEPSVIKPFETLLRRDETVLRYLTIAQDK 95
>gi|325279431|ref|YP_004251973.1| 30S ribosomal protein S6 [Odoribacter splanchnicus DSM 20712]
gi|324311240|gb|ADY31793.1| 30S ribosomal protein S6 [Odoribacter splanchnicus DSM 20712]
Length = 116
Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 58/114 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE VF+ +S QQIK+ + ++++ I +NGG + G+R +AY I+K +Y
Sbjct: 3 NHYETVFITTPVLSEQQIKEAVEKFKNTITDNGGTIEHEEAWGLRKLAYPIQKKTTGFYH 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ + A + +++ R DE V+R LT +D + TL + + ++
Sbjct: 63 LLQFEAEGALVDKLETAYRRDERVIRFLTFRLDKYAYEYTLKRRSKYAAKQEEK 116
>gi|307566428|ref|ZP_07628863.1| 30S ribosomal protein S6 [Prevotella amnii CRIS 21A-A]
gi|307344853|gb|EFN90255.1| 30S ribosomal protein S6 [Prevotella amnii CRIS 21A-A]
Length = 114
Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDDQMKETVAKFKTLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ ++ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFKAEPSVVNTLETGFRRDERVIRYITVKQDKYSAA 99
>gi|218264330|ref|ZP_03478187.1| hypothetical protein PRABACTJOHN_03878 [Parabacteroides johnsonii
DSM 18315]
gi|218222098|gb|EEC94748.1| hypothetical protein PRABACTJOHN_03878 [Parabacteroides johnsonii
DSM 18315]
Length = 117
Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ ++++E G E+ G+R +AY I K +Y
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNILKEQGAEIVNEENWGLRKLAYPIDKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + P I ++ R DE V+R LT D + +
Sbjct: 61 QLVEFKANPETIATLEVNFRRDERVIRFLTFRQDKYAAEYAAKRRS 106
>gi|153803834|ref|ZP_01958420.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
gi|124120632|gb|EAY39375.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
Length = 108
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 16 SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM 75
S+Q+ I +Y I E GG++ + + G R +AY I K KA+YV MN+ + A + E+
Sbjct: 1 SEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEADQAVVDEL 60
Query: 76 KRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ R ++ VLR++ + + P++ ++ + + D D +V+
Sbjct: 61 ETAFRFNDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDADVE 108
>gi|167627910|ref|YP_001678410.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189045469|sp|B0U079|RS6_FRAP2 RecName: Full=30S ribosomal protein S6
gi|167597911|gb|ABZ87909.1| 30S ribosomal protein S6 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 111
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V ++ D S+Q+ + +Y+ +I+E GG++ + G R +AY I K KA+Y
Sbjct: 1 MKHYEIVLMIHPD-QSEQLDAMLSKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V N+ ++ +++ ++ ++ VLR L + P++ ++ ++++
Sbjct: 60 VLFNVECDVESLEKLQENLKYNDAVLRRLVISKKEAVTEPSIMMETNEKE 109
>gi|160890913|ref|ZP_02071916.1| hypothetical protein BACUNI_03358 [Bacteroides uniformis ATCC 8492]
gi|167764866|ref|ZP_02436987.1| hypothetical protein BACSTE_03258 [Bacteroides stercoris ATCC
43183]
gi|270295894|ref|ZP_06202094.1| 30S ribosomal protein S6 [Bacteroides sp. D20]
gi|156859912|gb|EDO53343.1| hypothetical protein BACUNI_03358 [Bacteroides uniformis ATCC 8492]
gi|167697535|gb|EDS14114.1| hypothetical protein BACSTE_03258 [Bacteroides stercoris ATCC
43183]
gi|270273298|gb|EFA19160.1| 30S ribosomal protein S6 [Bacteroides sp. D20]
Length = 114
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT D + + + D
Sbjct: 61 QLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKYAAEYAAKRRSVKSTKKED 114
>gi|282860310|ref|ZP_06269379.1| ribosomal protein S6 [Prevotella bivia JCVIHMP010]
gi|282586907|gb|EFB92143.1| ribosomal protein S6 [Prevotella bivia JCVIHMP010]
Length = 114
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 58/99 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKALLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|242310275|ref|ZP_04809430.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
gi|239523572|gb|EEQ63438.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
Length = 145
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEIVQKIDFYKTAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI----QRHDRDDRNDRF 116
+ + P + E++R RI+E++LR + + DS ++ +++ +
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEDILRFIVIKYDSKKEQKAWETLVDRAINNKKATPLKE 120
Query: 117 PRDRNVDRKQHVSEEKPL 134
P+++ V+++ ++E
Sbjct: 121 PKEKAVEKEAPKAQEASE 138
>gi|262279562|ref|ZP_06057347.1| ribosomal protein S6 [Acinetobacter calcoaceticus RUH2202]
gi|262259913|gb|EEY78646.1| ribosomal protein S6 [Acinetobacter calcoaceticus RUH2202]
Length = 127
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R+L + + +L + + ++ R +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAE--EKRARKAQRE 117
Query: 121 NVDRKQHVSE 130
+ H +E
Sbjct: 118 EAQQVTHEAE 127
>gi|299769500|ref|YP_003731526.1| 30S ribosomal protein S6 [Acinetobacter sp. DR1]
gi|298699588|gb|ADI90153.1| 30S ribosomal protein S6 [Acinetobacter sp. DR1]
Length = 127
Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R+L + + +L + + ++ R +
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAE--EKRARKAQRE 117
Query: 121 NVDRKQHVSE 130
+ +E
Sbjct: 118 EAQQVAQDAE 127
>gi|293609460|ref|ZP_06691762.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827912|gb|EFF86275.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 129
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 3 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R+L + + +L + + + R + R+
Sbjct: 62 ILMNVECGQTTLDELEELFRYNDAIIRNLIIRREHAITEESL-LAKSAEEKRARKAQREE 120
Query: 121 NVDRKQHVS 129
Q
Sbjct: 121 AQQVAQEAE 129
>gi|292571635|gb|ADE29550.1| 30S ribosomal protein S6 [Rickettsia prowazekii Rp22]
Length = 145
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ I E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 85 YFLGIDITSNVKEELERKMKLNENIIRFLTIKADSISSEPSPILKNQSTEN 135
>gi|328954271|ref|YP_004371605.1| 30S ribosomal protein S6 [Desulfobacca acetoxidans DSM 11109]
gi|328454595|gb|AEB10424.1| 30S ribosomal protein S6 [Desulfobacca acetoxidans DSM 11109]
Length = 153
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F++ D+ + I ++ ++ G + + G R +AY+I+K + YY
Sbjct: 1 MNRYETIFIINPDLGDDETHSVIDKFTGIVGAQNGVQLKLEDWGRRRLAYKIKKFHQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR----------D 110
V ++ A PA + E +R ++ID+ +LR L++ + L + +
Sbjct: 61 VLLDFAGVPAGLAEFERNLKIDDRILRFLSVKTGENVDVEALKAEIAAKVKPQAEAGPTP 120
Query: 111 DRNDRFPRDRNVDRKQHVSEEKPLS 135
+ + P +V V+EE P++
Sbjct: 121 EVPEEAPAQESVAASPAVAEEIPVA 145
>gi|260592154|ref|ZP_05857612.1| ribosomal protein S6 [Prevotella veroralis F0319]
gi|260535788|gb|EEX18405.1| ribosomal protein S6 [Prevotella veroralis F0319]
Length = 114
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKTLLTDNGAEILNEEIWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|317011446|gb|ADU85193.1| 30S ribosomal protein S6 [Helicobacter pylori SouthAfrica7]
Length = 142
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKTKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + ++ H
Sbjct: 121 EKTEHTHSHHTEEAGSKESHSE 142
>gi|182416762|ref|ZP_02948159.1| ribosomal protein S6 [Clostridium butyricum 5521]
gi|237669664|ref|ZP_04529642.1| ribosomal protein S6 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379419|gb|EDT76914.1| ribosomal protein S6 [Clostridium butyricum 5521]
gi|237654898|gb|EEP52460.1| ribosomal protein S6 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 95
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L + +K I +++ +I+ GG V V+ G R +AY I K + YY
Sbjct: 1 MRKYETIFILNPSFDEETVKANIEKFKGVIENGGGTVENVDFWGKRKLAYEIAKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N + E+ R RI + V+R + +
Sbjct: 61 TLVNFTAGTELPRELDRIFRITDGVIRHIIV 91
>gi|34540403|ref|NP_904882.1| 30S ribosomal protein S6 [Porphyromonas gingivalis W83]
gi|188994503|ref|YP_001928755.1| 30S ribosomal protein S6 [Porphyromonas gingivalis ATCC 33277]
gi|61216268|sp|Q7MWL3|RS6_PORGI RecName: Full=30S ribosomal protein S6
gi|226695113|sp|B2RIG3|RS6_PORG3 RecName: Full=30S ribosomal protein S6
gi|34396716|gb|AAQ65781.1| ribosomal protein S6 [Porphyromonas gingivalis W83]
gi|188594183|dbj|BAG33158.1| 30S ribosomal protein S6 [Porphyromonas gingivalis ATCC 33277]
Length = 117
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ L+++ G + G+R +AY I+K +Y
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVDKFTGLLKQEGAVIVNEENWGLRKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + P I +++ R DE V+R LT D +
Sbjct: 61 QLVEFQANPDVIAKLETNFRRDERVIRFLTFRQDKFAAEYAAKRRS 106
>gi|325122722|gb|ADY82245.1| 30S ribosomal protein S6 [Acinetobacter calcoaceticus PHEA-2]
Length = 127
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R+L + + +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNLIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
Q
Sbjct: 119 AQQVAQEAE 127
>gi|237712432|ref|ZP_04542913.1| 30S ribosomal protein S6 [Bacteroides sp. 9_1_42FAA]
gi|229453753|gb|EEO59474.1| 30S ribosomal protein S6 [Bacteroides sp. 9_1_42FAA]
Length = 114
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P + +++ R DE V+R LT +D + + + D
Sbjct: 61 QLIEFKAEPQVVKKLEINFRRDERVIRFLTFKMDKYAAEYAAKRRNVKSTKKED 114
>gi|239946940|ref|ZP_04698693.1| 30S ribosomal protein S6 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921216|gb|EER21240.1| 30S ribosomal protein S6 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 145
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPSPILKNQSTEN 135
>gi|317479667|ref|ZP_07938791.1| ribosomal protein S6 [Bacteroides sp. 4_1_36]
gi|316904168|gb|EFV25998.1| ribosomal protein S6 [Bacteroides sp. 4_1_36]
Length = 114
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++S++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKSILTAEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT D + + + D
Sbjct: 61 QLIEFNAEPTVIEKLEINFRRDERVIRFLTFKQDKYAAEYAAKRRSVKSTKKED 114
>gi|109900047|ref|YP_663302.1| ribosomal protein S6 [Pseudoalteromonas atlantica T6c]
gi|109702328|gb|ABG42248.1| SSU ribosomal protein S6P [Pseudoalteromonas atlantica T6c]
Length = 135
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ +NGG + + + G R +AY I K KA+Y
Sbjct: 2 MRHYEIVFMVHPD-QSEQVPGMIERYTGILTQNGGTIHRMEDWGRRQLAYPIDKLHKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N + A+ E++ R ++ VLR+L + E + + R+ R++R +
Sbjct: 61 VLINAEASAEAVEELETAFRFNDVVLRNLVMRTKDAETEQSPMAKEERREKRDERPSSED 120
Query: 121 N---VDRKQHVSEEK 132
+ E++
Sbjct: 121 KSAEPEAATASDEQE 135
>gi|255319500|ref|ZP_05360714.1| ribosomal protein S6 [Acinetobacter radioresistens SK82]
gi|262378476|ref|ZP_06071633.1| ribosomal protein S6 [Acinetobacter radioresistens SH164]
gi|255303440|gb|EET82643.1| ribosomal protein S6 [Acinetobacter radioresistens SK82]
gi|262299761|gb|EEY87673.1| ribosomal protein S6 [Acinetobacter radioresistens SH164]
Length = 128
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y + I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYLTHIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R++ + ++ +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNVIIRRENAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
+ V
Sbjct: 119 AQHNQDSVE 127
>gi|212691068|ref|ZP_03299196.1| hypothetical protein BACDOR_00558 [Bacteroides dorei DSM 17855]
gi|237726622|ref|ZP_04557103.1| 30S ribosomal protein S6 [Bacteroides sp. D4]
gi|265752134|ref|ZP_06087927.1| 30S ribosomal protein S6 [Bacteroides sp. 3_1_33FAA]
gi|212666300|gb|EEB26872.1| hypothetical protein BACDOR_00558 [Bacteroides dorei DSM 17855]
gi|229435148|gb|EEO45225.1| 30S ribosomal protein S6 [Bacteroides dorei 5_1_36/D4]
gi|263236926|gb|EEZ22396.1| 30S ribosomal protein S6 [Bacteroides sp. 3_1_33FAA]
Length = 114
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 54/114 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + D
Sbjct: 61 QLIEFKAEPQVIKKLEINFRRDERVIRFLTFKMDKYAAEYAAKRRNVKSTKKED 114
>gi|114773243|ref|ZP_01450478.1| 30S ribosomal protein S6 [alpha proteobacterium HTCC2255]
gi|114546362|gb|EAU49271.1| 30S ribosomal protein S6 [alpha proteobacterium HTCC2255]
Length = 131
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ ++GG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPAMIEKYSGILTQDGGSITRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N + A+ E++ R ++ +LR+L + + + R++R +
Sbjct: 60 VLINAEASAEALEELETAFRFNDVILRNLVMRTKGPVTEASPMKKEERREERPTKREDAA 119
Query: 121 NVDRKQHVSEEK 132
E+
Sbjct: 120 PAPAADASDEQA 131
>gi|255535654|ref|YP_003096025.1| SSU ribosomal protein S6p [Flavobacteriaceae bacterium 3519-10]
gi|255341850|gb|ACU07963.1| SSU ribosomal protein S6p [Flavobacteriaceae bacterium 3519-10]
Length = 125
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 55/113 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ L+ + E+ G++ +AY I+ + +Y
Sbjct: 13 MNNYETVFILTPVLSDTQVEEAVQKFEDLLTSHNCEIVAKENWGLKKLAYPIQLKKNGFY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
+ + +++ + DE ++R LT +D H +T + ++ +
Sbjct: 73 TLIEFKGEGTVVADLELAFKRDERIIRFLTTKLDKHAIDYAVTRRSKNKSAKA 125
>gi|255020466|ref|ZP_05292531.1| SSU ribosomal protein S6p [Acidithiobacillus caldus ATCC 51756]
gi|254970076|gb|EET27573.1| SSU ribosomal protein S6p [Acidithiobacillus caldus ATCC 51756]
Length = 125
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+ + I +Y+ +I+ +GG + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVFLVHPD-QSELVPQMIERYRGMIEGDGGTIHRLEDWGRRQLAYPIKKAHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ AA+ E++ R + VLR L L D P+ + D +DR +R
Sbjct: 60 ILMNVECSAAALAELEDAFRFSDAVLRHLILARDEAITQPSFLAR--DENDRRERSESQE 117
Query: 121 NVDRKQHV 128
+
Sbjct: 118 ELQTAAGE 125
>gi|154491709|ref|ZP_02031335.1| hypothetical protein PARMER_01320 [Parabacteroides merdae ATCC
43184]
gi|154087950|gb|EDN86995.1| hypothetical protein PARMER_01320 [Parabacteroides merdae ATCC
43184]
Length = 117
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ +L++E G E+ G+R +AY I K +Y
Sbjct: 1 MNNYETVFILTPVLSDAQMKEAVEKFTNLLKEQGAEIVNEENWGLRKLAYPIDKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + P I ++ R DE V+R LT D + +
Sbjct: 61 QLVEFKANPETIATLEINFRRDERVIRFLTFRQDKYAAEYAAKRRS 106
>gi|88858914|ref|ZP_01133555.1| 30S ribosomal protein S6 [Pseudoalteromonas tunicata D2]
gi|88819140|gb|EAR28954.1| 30S ribosomal protein S6 [Pseudoalteromonas tunicata D2]
Length = 105
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y I E GG + + + G R +AY I K KA+YV MN+ +
Sbjct: 1 MVHPD-QSEQVPGMIERYTGSITEAGGTIHRLEDWGRRQLAYPIDKLHKAHYVLMNVEAT 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
I+E++ R ++ VLR+L + S +
Sbjct: 60 SEVINELETSFRYNDAVLRNLVMRTKSAVTEASP 93
>gi|303235712|ref|ZP_07322319.1| ribosomal protein S6 [Prevotella disiens FB035-09AN]
gi|302484159|gb|EFL47147.1| ribosomal protein S6 [Prevotella disiens FB035-09AN]
Length = 114
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + ++++L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKTLLTDNGAEILNEELWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 AMLEFNAEPSVINTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|226315509|ref|YP_002775405.1| 30S ribosomal protein S6 [Brevibacillus brevis NBRC 100599]
gi|254765223|sp|C0ZA47|RS6_BREBN RecName: Full=30S ribosomal protein S6
gi|226098459|dbj|BAH46901.1| 30S ribosomal protein S6 [Brevibacillus brevis NBRC 100599]
Length = 95
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 59/95 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ +++K + +Y ++ GGE+ + E+G R +AY I K R+ YY
Sbjct: 1 MRQYEVMYVLRPDLEEEKVKSNVARYSDVVTNYGGEISKLQEMGKRRLAYEINKFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN + A+ E +R M+I+++V+R + + +
Sbjct: 61 VLMNFKANSDAVAEAERLMKINDDVIRFMFVRDEK 95
>gi|188528036|ref|YP_001910723.1| 30S ribosomal protein S6 [Helicobacter pylori Shi470]
gi|226703476|sp|B2UV11|RS6_HELPS RecName: Full=30S ribosomal protein S6
gi|188144276|gb|ACD48693.1| 30S ribosomal protein S6 [Helicobacter pylori Shi470]
Length = 142
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKANPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEETESVGSHSK 142
>gi|323703278|ref|ZP_08114929.1| ribosomal protein S6 [Desulfotomaculum nigrificans DSM 574]
gi|323531743|gb|EGB21631.1| ribosomal protein S6 [Desulfotomaculum nigrificans DSM 574]
Length = 95
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ D+ +Q+ + +++ L++ G EV +++ G R +AY + R+ Y
Sbjct: 1 MRNYEVMYIVKPDVEDEQLNALVERFKGLVENQGAEVTKLDKWGKRRLAYEVNHLREGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V M + PAA E+ R ++I ++++R + + D
Sbjct: 61 VVMQFKAEPAAAAELDRVLKISDDIIRHIIVREDE 95
>gi|154175471|ref|YP_001407996.1| 30S ribosomal protein S6 [Campylobacter curvus 525.92]
gi|166226814|sp|A7GXQ4|RS6_CAMC5 RecName: Full=30S ribosomal protein S6
gi|112803344|gb|EAU00688.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
(Polyprenylp-hydroxybenzoate decarboxylase)
[Campylobacter curvus 525.92]
Length = 142
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++K + + +I +NGGE+ V E+G R +AY I+K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVKAKVDFVKEVITKNGGEIATVVEMGTRKLAYTIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL---------TIQRHDRDD 111
+ +PP + E+ R +RI E+++R L++ ++ + TI++ R+
Sbjct: 61 FVIYYKAPPTLLAELTRNIRITEDIIRFLSVKYENKREIAAWERLCKGIKQTIKKEPREP 120
Query: 112 RNDRFPRDRNVDR--KQHVSEE 131
R R PR+ ++ +Q SEE
Sbjct: 121 REPRAPREPKAEKIEEQTFSEE 142
>gi|153956492|ref|YP_001397257.1| 30S ribosomal protein S6 [Clostridium kluyveri DSM 555]
gi|219856795|ref|YP_002473917.1| hypothetical protein CKR_3452 [Clostridium kluyveri NBRC 12016]
gi|189045461|sp|A5N440|RS6_CLOK5 RecName: Full=30S ribosomal protein S6
gi|254765231|sp|B9DXR0|RS6_CLOK1 RecName: Full=30S ribosomal protein S6
gi|146349350|gb|EDK35886.1| RpsF [Clostridium kluyveri DSM 555]
gi|219570519|dbj|BAH08503.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 95
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L + + K + +++ +I+ GG + V+ G R +AY I+K + YY
Sbjct: 1 MGKYETIFILHPSLDEEGYKANVEKFKGVIENGGGVIENVDIWGKRKLAYEIKKVNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P E+ R RI + V+R + + +
Sbjct: 61 TLITFNADPTLPKELDRVFRITDTVVRHIIVKDEK 95
>gi|228469684|ref|ZP_04054652.1| ribosomal protein S6 [Porphyromonas uenonis 60-3]
gi|228308703|gb|EEK17429.1| ribosomal protein S6 [Porphyromonas uenonis 60-3]
Length = 115
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++ S + G + G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDAQMKEAVDKFTSHLTSAGATIVNDEHWGLKKLAYPIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + P+ I + MR DE VLR +T+ D
Sbjct: 61 HFIEFDAEPSVIKPFETLMRRDETVLRYITIAQDK 95
>gi|332830346|gb|EGK02974.1| 30S ribosomal protein S6 [Dysgonomonas gadei ATCC BAA-286]
Length = 118
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++++ G ++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFILTPVLSDVQMKEAVEKFKTILTNEGAKIVNEENWGLRKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + PA I +++ R DE V+R LT D ++ RN + P+
Sbjct: 61 AMLEFEADPAVIAKLEINFRRDERVIRFLTFRQDK-------FAHQYAEKRRNLKSPKKE 113
Query: 121 NV 122
V
Sbjct: 114 EV 115
>gi|94676773|ref|YP_589002.1| ribosomal protein S6 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166226803|sp|Q1LSR2|RS6_BAUCH RecName: Full=30S ribosomal protein S6
gi|94219923|gb|ABF14082.1| ribosomal protein S6 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 125
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S+Q+ I +Y ++I G++ + + G R ++Y I+K KA+Y
Sbjct: 1 MRHYEIVLMVHPD-QSEQVSRMIERYSTVITSAQGKIHRLEDWGRRQLSYPIKKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
V +N+ + + E+ + +R +E ++RS+ + V + ++ D
Sbjct: 60 VLINLEASQKVMDELSKYLRFNEAIIRSMIMRVKHIVTEASPMVKTKDD 108
>gi|296134462|ref|YP_003641709.1| ribosomal protein S6 [Thermincola sp. JR]
gi|296033040|gb|ADG83808.1| ribosomal protein S6 [Thermincola potens JR]
Length = 95
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ +Q + ++Q ++ GGE+ +++ G R +AY I R+ +Y
Sbjct: 1 MRAYEAMYIINPELDEEQSNAIVEKFQGIVTGTGGELVKLDKWGKRKLAYEIDHKREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V M PA E+ R RI + +++ + + D
Sbjct: 61 VLMQFNGEPATAQELDRVFRITDGIMKYMIVKEDK 95
>gi|322379200|ref|ZP_08053591.1| 30S ribosomal protein S6 [Helicobacter suis HS1]
gi|321148340|gb|EFX42849.1| 30S ribosomal protein S6 [Helicobacter suis HS1]
Length = 157
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F+L+ + + IKD + YQ +I ++GGEV ++G R +AY I+K+++ YY
Sbjct: 24 KHYETMFILKPTLVEEDIKDKLAFYQEVITKSGGEVVNTLDMGHRNLAYEIQKHKRGYYF 83
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + + E++R RI+E++LR + L +S ++
Sbjct: 84 VIYFTAHADVVLELERLYRINEDILRFMILKYESKKEQKAWQ 125
>gi|288802529|ref|ZP_06407968.1| ribosomal protein S6 [Prevotella melaninogenica D18]
gi|288335057|gb|EFC73493.1| ribosomal protein S6 [Prevotella melaninogenica D18]
Length = 114
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPTVIDTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|150002621|ref|YP_001297365.1| 30S ribosomal protein S6 [Bacteroides vulgatus ATCC 8482]
gi|254881415|ref|ZP_05254125.1| 30S ribosomal protein S6 [Bacteroides sp. 4_3_47FAA]
gi|294776101|ref|ZP_06741594.1| ribosomal protein S6 [Bacteroides vulgatus PC510]
gi|319642802|ref|ZP_07997440.1| hypothetical protein HMPREF9011_03040 [Bacteroides sp. 3_1_40A]
gi|166226801|sp|A6KWD7|RS6_BACV8 RecName: Full=30S ribosomal protein S6
gi|149931045|gb|ABR37743.1| 30S ribosomal protein S6 [Bacteroides vulgatus ATCC 8482]
gi|254834208|gb|EET14517.1| 30S ribosomal protein S6 [Bacteroides sp. 4_3_47FAA]
gi|294450052|gb|EFG18559.1| ribosomal protein S6 [Bacteroides vulgatus PC510]
gi|317385546|gb|EFV66487.1| hypothetical protein HMPREF9011_03040 [Bacteroides sp. 3_1_40A]
Length = 114
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 54/114 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKGILTAEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P I +++ R DE V+R LT +D + + + D
Sbjct: 61 QLIEFKAEPQVIEKLEINFRRDERVIRFLTFKMDKYAAEYAAKRRNVKSTKKED 114
>gi|332308095|ref|YP_004435946.1| ribosomal protein S6 [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175424|gb|AEE24678.1| ribosomal protein S6 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 134
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y ++ +NGG + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYTGILTQNGGTIHRMEDWGRRQLAYPIDKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +N + A+ E++ R ++ VLR+L + E + + R+ R++R +
Sbjct: 60 VLINAEASAEAVEELETAFRFNDVVLRNLVMRTKDAETEQSPMAKEERREKRDERPSSED 119
Query: 121 N---VDRKQHVSEEK 132
+ E++
Sbjct: 120 KSVEPEAATASDEKE 134
>gi|238750084|ref|ZP_04611587.1| 30S ribosomal subunit protein S6 [Yersinia rohdei ATCC 43380]
gi|238711628|gb|EEQ03843.1| 30S ribosomal subunit protein S6 [Yersinia rohdei ATCC 43380]
Length = 110
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y + I G + + + G R +AY I K KA+YV +N+ +P AI E++ R
Sbjct: 1 MIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQEAIDELETNFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEE 131
++ V+RS+ + V + ++ D F + N D + SEE
Sbjct: 61 NDAVIRSMVMRVKHAVTEASPMVKAKDERRERHDFASEANDDSEAGDSEE 110
>gi|308064026|gb|ADO05913.1| 30S ribosomal protein S6 [Helicobacter pylori Sat464]
Length = 142
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKANPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEEAESVGSHSE 142
>gi|169351668|ref|ZP_02868606.1| hypothetical protein CLOSPI_02449 [Clostridium spiroforme DSM
1552]
gi|169291890|gb|EDS74023.1| hypothetical protein CLOSPI_02449 [Clostridium spiroforme DSM
1552]
Length = 93
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 53/92 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ + I +++++ NGG V V+E G+R +AY I+ +K YY
Sbjct: 1 MNKYEIMFIVKPDVEEEARNTLIENFKNILTANGGTVDNVDEWGLRDLAYEIQDFKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V ++ A + E +R I+ ++LR LTL
Sbjct: 61 VVVDTTCTAADVAEFERLSNINSSMLRHLTLR 92
>gi|86142230|ref|ZP_01060740.1| 30S ribosomal protein S6 [Leeuwenhoekiella blandensis MED217]
gi|85830982|gb|EAQ49439.1| 30S ribosomal protein S6 [Leeuwenhoekiella blandensis MED217]
Length = 112
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + NG ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQVKETVKKFEDFLVSNGAKMISKEDWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
P I + + R DE V+R LT+ +D + ++ +++
Sbjct: 61 HLFEFTVPGEVIANFELEFRRDERVMRFLTVKLDKYAIEWAEKRRKRNKEK 111
>gi|229586274|ref|YP_002844775.1| 30S ribosomal protein S6 [Rickettsia africae ESF-5]
gi|15619101|gb|AAL02602.1| 30S ribosomal protein S6 [Rickettsia conorii str. Malish 7]
gi|228021324|gb|ACP53032.1| 30S ribosomal protein S6 [Rickettsia africae ESF-5]
Length = 145
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 135
>gi|208435141|ref|YP_002266807.1| ribosomal protein S6 [Helicobacter pylori G27]
gi|226703475|sp|B5Z8P2|RS6_HELPG RecName: Full=30S ribosomal protein S6
gi|208433070|gb|ACI27941.1| ribosomal protein S6 [Helicobacter pylori G27]
Length = 142
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + + H
Sbjct: 121 EKTEHAHSHHAEEAKSTESHSE 142
>gi|187934196|ref|YP_001887721.1| 30S ribosomal protein S6 [Clostridium botulinum B str. Eklund
17B]
gi|188589519|ref|YP_001922704.1| 30S ribosomal protein S6 [Clostridium botulinum E3 str. Alaska
E43]
gi|251780573|ref|ZP_04823493.1| 30S ribosomal protein S6 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|187722349|gb|ACD23570.1| 30S ribosomal protein S6 [Clostridium botulinum B str. Eklund
17B]
gi|188499800|gb|ACD52936.1| 30S ribosomal protein S6 [Clostridium botulinum E3 str. Alaska
E43]
gi|243084888|gb|EES50778.1| 30S ribosomal protein S6 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 96
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ + +K I +++ +I+ GG + V+ G R +AY I K YY
Sbjct: 2 MRKYETIFIQHPSFDEETVKTNIEKFKGVIENGGGTIENVDFWGKRKLAYEISKVSDGYY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P E+ R RI + ++R + +
Sbjct: 62 TLVSFNAGPELPKELDRVFRITDGIIRHIIVK 93
>gi|325298155|ref|YP_004258072.1| 30S ribosomal protein S6 [Bacteroides salanitronis DSM 18170]
gi|324317708|gb|ADY35599.1| 30S ribosomal protein S6 [Bacteroides salanitronis DSM 18170]
Length = 115
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++++ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKTILTQEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P+ I +++ R DE V+R LT +D + + + +
Sbjct: 61 QLLEFKADPSVISKLEINYRRDERVIRFLTFRMDKYAAEYAAKRRSLKSTKKEE 114
>gi|333029250|ref|ZP_08457311.1| 30S ribosomal protein S6 [Bacteroides coprosuis DSM 18011]
gi|332739847|gb|EGJ70329.1| 30S ribosomal protein S6 [Bacteroides coprosuis DSM 18011]
Length = 115
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++Q G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKDVLQAEGAEIVNEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ + PA I +++ R DE V+R LT +D + + + +
Sbjct: 61 QLLEFNADPAVIEKLEVSFRRDERVIRFLTFKMDKYAAEYAAKRRNIKSSKKEGK 115
>gi|332883574|gb|EGK03857.1| 30S ribosomal protein S6 [Dysgonomonas mossii DSM 22836]
Length = 118
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++L+ G ++ G+R +AY I+K +Y
Sbjct: 1 MNNYETVFILTPVLSDVQMKEAVEKFKTLLVNEGAKIVSEENWGLRKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ + P+ I +++ R DE V+R LT D L + + +
Sbjct: 61 AMLEFEADPSVIAKLEINFRRDERVIRFLTFRQDKFSHEYALKRRSLKSSKKEEVKE 117
>gi|83589001|ref|YP_429010.1| 30S ribosomal protein S6 [Moorella thermoacetica ATCC 39073]
gi|91207918|sp|Q2RM72|RS6_MOOTA RecName: Full=30S ribosomal protein S6
gi|83571915|gb|ABC18467.1| SSU ribosomal protein S6P [Moorella thermoacetica ATCC 39073]
Length = 98
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++R D+ ++ + ++ LI + GG+V V++ G + +AY +RK R+ YY
Sbjct: 1 MRNYEVVFVIRPDLEAEATTAVVEKFTQLITDQGGQVTRVDQWGKKRMAYEVRKYREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V + PA E++R ++I ++V+R L ++
Sbjct: 61 VLVEFKGTPAVAQELERVLKISDDVIRYLITRLEEE 96
>gi|317014637|gb|ADU82073.1| 30S ribosomal protein S6 [Helicobacter pylori Gambia94/24]
Length = 142
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + + H
Sbjct: 121 EKTEHAHSHHAEEAKSAESHSE 142
>gi|217032305|ref|ZP_03437801.1| hypothetical protein HPB128_132g3 [Helicobacter pylori B128]
gi|217033567|ref|ZP_03438995.1| hypothetical protein HP9810_899g3 [Helicobacter pylori 98-10]
gi|298735730|ref|YP_003728255.1| 30S ribosomal protein S6 [Helicobacter pylori B8]
gi|308183356|ref|YP_003927483.1| 30S ribosomal protein S6 [Helicobacter pylori PeCan4]
gi|216943913|gb|EEC23347.1| hypothetical protein HP9810_899g3 [Helicobacter pylori 98-10]
gi|216945971|gb|EEC24585.1| hypothetical protein HPB128_132g3 [Helicobacter pylori B128]
gi|261838569|gb|ACX98335.1| ribosomal protein S6 [Helicobacter pylori 51]
gi|298354919|emb|CBI65791.1| small subunit ribosomal protein S6 [Helicobacter pylori B8]
gi|308065541|gb|ADO07433.1| 30S ribosomal protein S6 [Helicobacter pylori PeCan4]
gi|317009930|gb|ADU80510.1| 30S ribosomal protein S6 [Helicobacter pylori India7]
gi|317178460|dbj|BAJ56248.1| 30S ribosomal protein S6 [Helicobacter pylori F30]
gi|317180972|dbj|BAJ58758.1| 30S ribosomal protein S6 [Helicobacter pylori F32]
Length = 142
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEEAESVGSHSE 142
>gi|167755262|ref|ZP_02427389.1| hypothetical protein CLORAM_00767 [Clostridium ramosum DSM 1402]
gi|237735010|ref|ZP_04565491.1| 30S ribosomal protein S6 [Mollicutes bacterium D7]
gi|167705312|gb|EDS19891.1| hypothetical protein CLORAM_00767 [Clostridium ramosum DSM 1402]
gi|229381786|gb|EEO31877.1| 30S ribosomal protein S6 [Coprobacillus sp. D7]
Length = 93
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ I ++ ++ NGG V V+E G+R +AY I+ +K YY
Sbjct: 1 MNKYEIMFIVKPDVEDDARNALIESFKGILTANGGTVDNVDEWGLRDLAYEIKDYKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V ++ A + E +R I+ ++LR LTL
Sbjct: 61 VVVDATCTAADVAEFERLSNINASMLRHLTLR 92
>gi|260912754|ref|ZP_05919240.1| 30S ribosomal protein S6 [Pasteurella dagmatis ATCC 43325]
gi|260633132|gb|EEX51297.1| 30S ribosomal protein S6 [Pasteurella dagmatis ATCC 43325]
Length = 117
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y I+E GG++ + + G R +AY I K KA+YV MN+ +P
Sbjct: 1 MVHPD-QSEQVPGMIERYTGSIKEAGGQIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQ 126
I E++ R ++ VLR++ + + ++ D + D ++
Sbjct: 60 QEVIDELETTFRYNDAVLRNVIIRTKHAVTEASPMVKAKDDRKALAEVENNDFEDAEE 117
>gi|258512888|ref|YP_003186322.1| 30S ribosomal protein S6 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479614|gb|ACV59933.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 95
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + ++Q + I +YQS++ + GG++ + E+G R +AY I +R+ YY
Sbjct: 1 MRQYETMYIVNPSLEAEQTAEVIQRYQSIVTDKGGQIDELQEIGKRRLAYEIDGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V M E++R MRID+NV+R LT+ V
Sbjct: 61 VLMKFTCDTETPKELERLMRIDDNVIRYLTVRVGE 95
>gi|302343162|ref|YP_003807691.1| ribosomal protein S6 [Desulfarculus baarsii DSM 2075]
gi|301639775|gb|ADK85097.1| ribosomal protein S6 [Desulfarculus baarsii DSM 2075]
Length = 141
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 57/93 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ + + +++ +++++G E+ V+ G R +AY+++K K ++
Sbjct: 1 MRHYETIFIIDPELPEDECSAVVDKFKGILEKDGSEMVKVDLWGRRRLAYQVKKYTKGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + PA + E++R +IDE V+R L++ +
Sbjct: 61 VLFEYGAKPAVVDELERNFKIDERVIRFLSVKL 93
>gi|294501976|ref|YP_003565676.1| 30S ribosomal protein S6 [Bacillus megaterium QM B1551]
gi|295707327|ref|YP_003600402.1| 30S ribosomal protein S6 [Bacillus megaterium DSM 319]
gi|294351913|gb|ADE72242.1| 30S ribosomal protein S6 [Bacillus megaterium QM B1551]
gi|294804986|gb|ADF42052.1| 30S ribosomal protein S6 [Bacillus megaterium DSM 319]
Length = 95
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R I + K + ++ ++ +NG E+ V E G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPSIDDEAKKALVERFNGVLTDNGAEIANVKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +++A+ A+ E R +I+E+++R + + ++
Sbjct: 61 MILDVAATSEAVSEFDRLAKINEDIIRHIVVKQEA 95
>gi|157825189|ref|YP_001492909.1| 30S ribosomal protein S6 [Rickettsia akari str. Hartford]
gi|157799147|gb|ABV74401.1| 30S ribosomal protein S6 [Rickettsia akari str. Hartford]
Length = 142
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 22 MSFYESVFIIRQDVSLNDIDKIVDDFVKIIKDNNGTIIKKEYWGIRTLAYKIGNNKKGHY 81
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ I E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 82 YFLGIDVTCNVKEELERKMKLNENIIRFLTIKTDSISSEPSPILKNQSTEN 132
>gi|152990908|ref|YP_001356630.1| 30S ribosomal protein S6 [Nitratiruptor sp. SB155-2]
gi|166227355|sp|A6Q464|RS6_NITSB RecName: Full=30S ribosomal protein S6
gi|151422769|dbj|BAF70273.1| 30S ribosomal protein S6 [Nitratiruptor sp. SB155-2]
Length = 128
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ ++ ++ K + +IQ NGGE+ +LG+R +AY I+K + +Y
Sbjct: 1 MRHYETLFVLKPTLTDEESKAKFEFIKEVIQNNGGEIVATEDLGVRKLAYPIQKFERGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +P + E++R RI E+V+R LT+ ++ + +R +
Sbjct: 61 YIIYFTAPSHTVLELERIYRITEDVIRFLTIKYETKKDISAW----EKMVERAKKLSGQT 116
Query: 121 NVDRKQHVSE 130
N + K+ +E
Sbjct: 117 NSEAKEEANE 126
>gi|261880413|ref|ZP_06006840.1| 30S ribosomal protein S6 [Prevotella bergensis DSM 17361]
gi|270332882|gb|EFA43668.1| 30S ribosomal protein S6 [Prevotella bergensis DSM 17361]
Length = 114
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ + +++ R DE V+R +T+ ++ + +
Sbjct: 61 CLLEFKAEPSVVDKLETGYRRDEKVIRFMTVKLEKYAAA 99
>gi|261839965|gb|ACX99730.1| 30S ribosomal protein S6 [Helicobacter pylori 52]
Length = 142
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYSEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEEAESVGSHSE 142
>gi|313202817|ref|YP_004041474.1| SSU ribosomal protein s6p [Paludibacter propionicigenes WB4]
gi|312442133|gb|ADQ78489.1| SSU ribosomal protein S6P [Paludibacter propionicigenes WB4]
Length = 116
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE VF+L +S Q+K+ + ++++++ ENG + G+R + Y I+K +Y
Sbjct: 3 NHYETVFILTPVLSDVQMKEAVEKFKTILTENGATITNEENWGLRKLQYPIQKKSTGFYS 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I ++ + R DE VLR L+ +D +
Sbjct: 63 LLQFDAEPTVIATLETQFRRDERVLRFLSFRLDKY 97
>gi|325270187|ref|ZP_08136794.1| 30S ribosomal protein S6 [Prevotella multiformis DSM 16608]
gi|324987488|gb|EGC19464.1| 30S ribosomal protein S6 [Prevotella multiformis DSM 16608]
Length = 114
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFRKLLTDNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVIDTLETGFRRDEKVIRYITVKQDKYSAA 99
>gi|21672805|ref|NP_660872.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009193|sp|Q8K918|RS6_BUCAP RecName: Full=30S ribosomal protein S6
gi|21623455|gb|AAM68083.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 113
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S +++ I +Y+ +I N G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIIFMIHPDYS-EKVSVIIEKYKKIIHHNSGIIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+ +NI + P I ++ R + V+R++ + V P+ I
Sbjct: 60 ILLNIETFPKTISLLETDFRFNNAVIRNIIISVKKAINEPSPVI 103
>gi|163755339|ref|ZP_02162459.1| 30S ribosomal protein S6 [Kordia algicida OT-1]
gi|161324759|gb|EDP96088.1| 30S ribosomal protein S6 [Kordia algicida OT-1]
Length = 112
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +++ I GG++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQIKETVAKFEDFIVSRGGKMISKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+P I++ + + R DE ++R LT+ +D H + +R +R
Sbjct: 61 HLFEFQAPGEIINQYELEFRRDERIMRYLTVRLDKH--AIAWAEKRRNR 107
>gi|308062529|gb|ADO04417.1| 30S ribosomal protein S6 [Helicobacter pylori Cuz20]
Length = 142
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHLEEAESVGSHSE 142
>gi|15612232|ref|NP_223885.1| 30S ribosomal protein S6 [Helicobacter pylori J99]
gi|7388226|sp|Q9ZJY1|RS6_HELPJ RecName: Full=30S ribosomal protein S6
gi|4155764|gb|AAD06741.1| 30S RIBOSOMAL PROTEIN S6 [Helicobacter pylori J99]
Length = 142
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + + H
Sbjct: 121 EKTEHTHSHHAEEAKSTESHSE 142
>gi|254417739|ref|ZP_05031463.1| ribosomal protein S6, putative [Brevundimonas sp. BAL3]
gi|196183916|gb|EDX78892.1| ribosomal protein S6, putative [Brevundimonas sp. BAL3]
Length = 147
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQDIS+QQ + + LI + GG V + G+R + YR++KNRKA+Y
Sbjct: 20 MALYEHTVMTRQDISAQQAEALNDTIKDLIVQGGGSVAKIEYWGLRNLTYRVKKNRKAHY 79
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPR 118
+ + +PPAA+ E++R++ I+E+VLR LT+ V+ E SP L + +R+ +R PR
Sbjct: 80 SLLAVDAPPAAMAEVERQLGINEDVLRWLTVRVEELDLELSPLLARRERERERERERTPR 139
Query: 119 DRNV 122
D
Sbjct: 140 DDAA 143
>gi|157827735|ref|YP_001496799.1| 30S ribosomal protein S6 [Rickettsia bellii OSU 85-389]
gi|166227375|sp|A8GY12|RS6_RICB8 RecName: Full=30S ribosomal protein S6
gi|157803039|gb|ABV79762.1| 30S ribosomal protein S6 [Rickettsia bellii OSU 85-389]
Length = 120
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 65/111 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+R +AY+I ++K +Y
Sbjct: 1 MSFYESVFIVRQDVSLNDIDKIVDDFTKIIKDNNGAIVKKEYWGLRALAYKIGNHKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ + + PA E++RKM+++EN++R LT VDS P+ ++ ++
Sbjct: 61 YLLGLDTTPAVKQELERKMKLNENIIRFLTQKVDSISNEPSPILKNQSTEN 111
>gi|261410092|ref|YP_003246333.1| 30S ribosomal protein S6 [Paenibacillus sp. Y412MC10]
gi|329925059|ref|ZP_08280003.1| ribosomal protein S6 [Paenibacillus sp. HGF5]
gi|261286555|gb|ACX68526.1| ribosomal protein S6 [Paenibacillus sp. Y412MC10]
gi|328940178|gb|EGG36510.1| ribosomal protein S6 [Paenibacillus sp. HGF5]
Length = 94
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ + ++Q +I NGGE+ + +G R +AY I+K R Y
Sbjct: 1 MRKYEVMYIIRPDIEQEAVQAAVDKFQGII-SNGGEITKHDVMGKRRLAYEIKKFRDGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +N + P + E++R M+I + V+R L
Sbjct: 60 VLVNFNATPEVVAELERLMKISDEVIRYLI 89
>gi|289209096|ref|YP_003461162.1| ribosomal protein S6 [Thioalkalivibrio sp. K90mix]
gi|288944727|gb|ADC72426.1| ribosomal protein S6 [Thioalkalivibrio sp. K90mix]
Length = 134
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VFL+ D S+Q+ I +Y+ L++ + G++ + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEVVFLVHPD-QSEQVPAMIERYKGLVEGHEGKIHRLEDWGRRQLAYPIQKLVKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V MNI + A+ E+ R ++ VLR L + ++ + + + ++ R+R
Sbjct: 60 VLMNIEASEEALEELVSAFRFNDAVLRHLAMRMEEAVTETSP-LAKGQEEEGAKGRRRER 118
Query: 121 NVDRKQHVSEEKPLS 135
+ + Q S++ +
Sbjct: 119 DDEGGQAASDDSASA 133
>gi|15603918|ref|NP_220433.1| 30S ribosomal protein S6 [Rickettsia prowazekii str. Madrid E]
gi|6226109|sp|Q9ZEA6|RS6_RICPR RecName: Full=30S ribosomal protein S6
gi|3860609|emb|CAA14510.1| 30S RIBOSOMAL PROTEIN S6 (rpsF) [Rickettsia prowazekii]
Length = 121
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ I E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 61 YFLGIDITSNVKEELERKMKLNENIIRFLTIKADSISSEPSPILKNQSTEN 111
>gi|15645860|ref|NP_208038.1| 30S ribosomal protein S6 [Helicobacter pylori 26695]
gi|2500411|sp|P56013|RS6_HELPY RecName: Full=30S ribosomal protein S6
gi|2314412|gb|AAD08292.1| ribosomal protein S6 (rps6) [Helicobacter pylori 26695]
Length = 142
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEEAESVGSHSE 142
>gi|126654886|ref|ZP_01726420.1| 30S ribosomal protein S6 [Cyanothece sp. CCY0110]
gi|126623621|gb|EAZ94325.1| 30S ribosomal protein S6 [Cyanothece sp. CCY0110]
Length = 126
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F+LR D+S +Q+ + +YQ + EN G R +AY I+K YV
Sbjct: 3 RQYEMIFILRPDLSEEQVNQAVTKYQEFLTENNATDLQTKIWGKRRLAYPIQKKVDGIYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N + + I ++R MR+ E+VLR LT+ +D
Sbjct: 63 QFNYQADGSQIAPLERMMRLGEDVLRYLTIKLD 95
>gi|332983148|ref|YP_004464589.1| 30S ribosomal protein S6P [Mahella australiensis 50-1 BON]
gi|332700826|gb|AEE97767.1| SSU ribosomal protein S6P [Mahella australiensis 50-1 BON]
Length = 96
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 57/94 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ + ++ + I ++++LI E GGEVR V+E G R +AY I+ + YY
Sbjct: 1 MREYETMFVINPTLDAEATQAVIERFKNLISEQGGEVRNVDEWGRRKLAYEIKDFNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V M A+ P E++R +I ++++R L + +
Sbjct: 61 VLMEFAANPDLPAELERVYKITDDIIRYLIISKE 94
>gi|65317455|ref|ZP_00390414.1| COG0360: Ribosomal protein S6 [Bacillus anthracis str. A2012]
gi|118480502|ref|YP_897653.1| 30S ribosomal protein S6 [Bacillus thuringiensis str. Al Hakam]
gi|118419727|gb|ABK88146.1| SSU ribosomal protein S6P [Bacillus thuringiensis str. Al Hakam]
Length = 113
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ + AI+E R +I+E++LR + + +
Sbjct: 78 MILNVNANAEAINEFDRLAKINEDILRHIVVKEEE 112
>gi|172037638|ref|YP_001804139.1| 30S ribosomal protein S6 [Cyanothece sp. ATCC 51142]
gi|254765233|sp|B1WU11|RS6_CYAA5 RecName: Full=30S ribosomal protein S6
gi|171699092|gb|ACB52073.1| 30s ribosomal protein S6 [Cyanothece sp. ATCC 51142]
Length = 119
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+LR D+S +Q+ + +YQ + EN G R +AY I+K YV
Sbjct: 4 HYEMIFILRPDLSEEQVNQAVAKYQEFLTENNATDLQTKIWGKRRLAYPIQKKVDGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + + + ++R MR+ E+V+R LT+ +D
Sbjct: 64 FNYQADGSQVAPLERMMRLGEDVMRYLTIKLDH 96
>gi|126661840|ref|ZP_01732839.1| 30S ribosomal subunit protein S6 [Flavobacteria bacterium BAL38]
gi|126625219|gb|EAZ95908.1| 30S ribosomal subunit protein S6 [Flavobacteria bacterium BAL38]
Length = 113
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QQ+K+T+ +++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEQQVKETVSKFEDFLTSKGSEMVSKEDWGLKKLAYEIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P I + + R DE V+R LT+ +D H S
Sbjct: 61 HLFEFKAPAEIIIAFETEFRRDERVMRFLTVSLDKHAIS 99
>gi|207092387|ref|ZP_03240174.1| 30S ribosomal protein S6 [Helicobacter pylori HPKX_438_AG0C1]
Length = 142
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHTEEAESVGSHSE 142
>gi|108563614|ref|YP_627930.1| 30S ribosomal protein S6 [Helicobacter pylori HPAG1]
gi|123073733|sp|Q1CS16|RS6_HELPH RecName: Full=30S ribosomal protein S6
gi|107837387|gb|ABF85256.1| ribosomal protein S6 [Helicobacter pylori HPAG1]
gi|317182495|dbj|BAJ60279.1| 30S ribosomal protein S6 [Helicobacter pylori F57]
Length = 142
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHLEEAESVGSHSE 142
>gi|91204937|ref|YP_537292.1| 30S ribosomal protein S6 [Rickettsia bellii RML369-C]
gi|122426077|sp|Q1RKB1|RS6_RICBR RecName: Full=30S ribosomal protein S6
gi|91068481|gb|ABE04203.1| 30S ribosomal protein S6 [Rickettsia bellii RML369-C]
Length = 120
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 65/111 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+R +AY+I ++K +Y
Sbjct: 1 MSFYESVFIVRQDVSLNDIDKIVDDFSKIIKDNNGAIVKKEYWGLRALAYKIGNHKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+ + + PA E++RKM+++EN++R LT VDS P+ ++ ++
Sbjct: 61 YLLGLDTTPAVKQELERKMKLNENIIRFLTQKVDSISNEPSPILKNQSTEN 111
>gi|124009488|ref|ZP_01694164.1| ribosomal protein S6 [Microscilla marina ATCC 23134]
gi|123984937|gb|EAY24900.1| ribosomal protein S6 [Microscilla marina ATCC 23134]
Length = 124
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE VF+L +S +QIKDT+ ++Q ++ +NG E+ V+ GM+ +AY I+K Y
Sbjct: 4 NNYETVFILTPVLSDEQIKDTVEKFQKILADNGAEIVHVDHWGMKKLAYPIKKKTSGVYT 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ +P + ++ + R DE V+R + +++D H + +R D + D
Sbjct: 64 VVEFKAPSTIVKALETEYRRDERVMRHICIVLDKHAVAYNEKKRRKLSDKKVDEAATTEE 123
>gi|332293236|ref|YP_004431845.1| ribosomal protein S6 [Krokinobacter diaphorus 4H-3-7-5]
gi|332171322|gb|AEE20577.1| ribosomal protein S6 [Krokinobacter diaphorus 4H-3-7-5]
Length = 113
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ L++E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQIKETVKKYEGLLKEKGAKMISKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ AI++ + R DE V+R LT+ +D H + + +R ++ +
Sbjct: 61 HLLEFTVDGQAINDYELAFRRDERVMRYLTVTLDKH--AISWAERRREKLKK 110
>gi|296167066|ref|ZP_06849478.1| 30S ribosomal protein S6 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897623|gb|EFG77217.1| 30S ribosomal protein S6 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 108
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 13 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 73 VVVDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 108
>gi|254457666|ref|ZP_05071094.1| 30S ribosomal protein S6 [Campylobacterales bacterium GD 1]
gi|207086458|gb|EDZ63742.1| 30S ribosomal protein S6 [Campylobacterales bacterium GD 1]
Length = 151
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 75/134 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++++I+ +I + +I NGGE+ + +GMR +AY I KN + YY
Sbjct: 1 MRNYENLVIVKPTFTAEEIQSSIKAIEEVITSNGGEIATTDSMGMRKLAYPINKNERGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + P+AI E++R+ RI+E++LR +T+ D++ + + ++
Sbjct: 61 HVIYYSIAPSAISEIERRFRINEDLLRFVTIKYDTNREIIAWNKLVEKAQRKAAAPAKEE 120
Query: 121 NVDRKQHVSEEKPL 134
+ V+EE P+
Sbjct: 121 TPVEEAPVTEEAPV 134
>gi|157803226|ref|YP_001491775.1| 30S ribosomal protein S6 [Rickettsia canadensis str. McKiel]
gi|166227376|sp|A8EXA7|RS6_RICCK RecName: Full=30S ribosomal protein S6
gi|157784489|gb|ABV72990.1| 30S ribosomal protein S6 [Rickettsia canadensis str. McKiel]
Length = 121
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 65/112 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQDIS I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDISLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGSNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
F+ + P E++RKM+++EN++R LT+ D+ P+ ++ ++
Sbjct: 61 YFLGLDITPNVKEEIERKMKLNENIIRFLTIKADAISSEPSPMLKNQSTENN 112
>gi|239828696|ref|YP_002951320.1| 30S ribosomal protein S6 [Geobacillus sp. WCH70]
gi|259495336|sp|C5D9X6|RS6_GEOSW RecName: Full=30S ribosomal protein S6
gi|239808989|gb|ACS26054.1| ribosomal protein S6 [Geobacillus sp. WCH70]
Length = 95
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R +Y
Sbjct: 1 MRKYEIMYIIRPNLDDEARQAVVDRFNNILKENGAEITNVTDWGKRRLAYEIKKYRDGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S P A+ E R RI ++++R + + +
Sbjct: 61 MILNVVSEPKAVQEFDRLARISDDIIRHIVVKEEK 95
>gi|157964104|ref|YP_001498928.1| 30S ribosomal protein S6 [Rickettsia massiliae MTU5]
gi|157843880|gb|ABV84381.1| 30S ribosomal protein S6 [Rickettsia massiliae MTU5]
Length = 145
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 25 MSFYESVFIIRQDVSLNDIDKIVNDFAKIIKDNNGTIIKKEYWGVRTLAYKIGNNKKGHY 84
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 85 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 135
>gi|224418788|ref|ZP_03656794.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|253826689|ref|ZP_04869574.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|313142305|ref|ZP_07804498.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|253510095|gb|EES88754.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
gi|313131336|gb|EFR48953.1| 30S ribosomal protein S6 [Helicobacter canadensis MIT 98-5491]
Length = 142
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEITQKIDFYKAAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL-------TIQRHDRDDRN 113
+ + P + E++R RI+E++LR + + DS ++ + +
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEDILRFIVIKYDSKKEQKAWEVLVDRAIHNKKAAPLKE 120
Query: 114 DRFPRDRNVDRKQHVSEEKPLS 135
R ++ + E S
Sbjct: 121 AREAKETAPKEEAKSEEASQES 142
>gi|254779789|ref|YP_003057895.1| 30S ribosomal protein S6 [Helicobacter pylori B38]
gi|254001701|emb|CAX29932.1| 30S ribosomal subunit protein S6 [Helicobacter pylori B38]
Length = 142
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEIEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHAEEAESVGSHSE 142
>gi|319760230|ref|YP_004124168.1| 30S ribosomal protein S6 [Candidatus Blochmannia vafer str. BVAF]
gi|318038944|gb|ADV33494.1| 30S ribosomal protein S6 [Candidatus Blochmannia vafer str. BVAF]
Length = 122
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ + +I + I Y +I +GG+V V G R +AY I+K KAYY
Sbjct: 1 MRHYEIVLIIHPNFGG-KIVNIINNYTEIIISSGGKVHRVENWGDRQLAYSIKKLSKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V MNI I+E+ R +E +LR++ + + P+ + + + ++N
Sbjct: 60 VLMNIEVSLNVINELSNDFRFNEVILRNIIMKTKDAKIDPSPMMNKKEDSNKN 112
>gi|312131695|ref|YP_003999035.1| ssu ribosomal protein s6p [Leadbetterella byssophila DSM 17132]
gi|311908241|gb|ADQ18682.1| SSU ribosomal protein S6P [Leadbetterella byssophila DSM 17132]
Length = 120
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE VF+L +S QIKD + +++S++ +NG E+ G++ +AY I+ YY
Sbjct: 4 NQYETVFILTPVLSDAQIKDAVDKFKSVLTDNGAEIINEEAWGLKKLAYPIQHKTTGYYQ 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + P I ++ + + DE VLR LT +D H + ++
Sbjct: 64 LVEFKADPKLIATLETEYKRDERVLRFLTTKLDKHAIEYSERRRKG 109
>gi|86130270|ref|ZP_01048870.1| 30S ribosomal protein S6 [Dokdonia donghaensis MED134]
gi|85818945|gb|EAQ40104.1| 30S ribosomal protein S6 [Dokdonia donghaensis MED134]
Length = 113
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ L++E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDDQIKETVKKYEGLLKEKGAKMISKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ AI++ + R DE V+R LT+ +D H + + +R ++ +
Sbjct: 61 HLLEFTVDGQAINDYELAFRRDERVMRYLTVAMDKH--AISWAERRREKLKK 110
>gi|330995928|ref|ZP_08319823.1| ribosomal protein S6 [Paraprevotella xylaniphila YIT 11841]
gi|332877545|ref|ZP_08445292.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|329574267|gb|EGG55842.1| ribosomal protein S6 [Paraprevotella xylaniphila YIT 11841]
gi|332684651|gb|EGJ57501.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 113
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + +++ ++ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDDQMKEAVNKFRGILTDNGAEIINEENWGLKKLAYAIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ M + P I ++ R DE VLR LT+ ++ + +R+++ + D
Sbjct: 61 ILMEFKAQPEVIKTLEVNFRRDEKVLRFLTIKMEKYAAEYA-EKRRNNKSKKED 113
>gi|153803776|ref|ZP_01958362.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
gi|124120686|gb|EAY39429.1| ribosomal protein S6 [Vibrio cholerae MZO-3]
Length = 95
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q+ I +Y I E GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVAGMIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRID 82
V MN+ + A + E++ R
Sbjct: 60 VLMNVEADQAVVDELETAFRFT 81
>gi|288926385|ref|ZP_06420307.1| ribosomal protein S6 [Prevotella buccae D17]
gi|315608714|ref|ZP_07883692.1| 30S ribosomal protein S6 [Prevotella buccae ATCC 33574]
gi|288336838|gb|EFC75202.1| ribosomal protein S6 [Prevotella buccae D17]
gi|315249564|gb|EFU29575.1| 30S ribosomal protein S6 [Prevotella buccae ATCC 33574]
Length = 114
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAELVSEETWGLKKLAYNIQKKTSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ I +++ R +E V+R +T+ +D +
Sbjct: 61 CLFEFKAEPSVIEKLETGFRREEKVIRYMTVKLDKY 96
>gi|302383704|ref|YP_003819527.1| ribosomal protein S6 [Brevundimonas subvibrioides ATCC 15264]
gi|302194332|gb|ADL01904.1| ribosomal protein S6 [Brevundimonas subvibrioides ATCC 15264]
Length = 127
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 64/105 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQDIS+QQ + + LI GG V + G+R + YR++KNRKA+Y
Sbjct: 1 MALYEHTVMSRQDISAQQAEALNDTIKDLIVAGGGSVAKIEYWGLRNLTYRVKKNRKAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+ I PP A+ E++R++ I+E+VLR LT+ V+ + + +
Sbjct: 61 SLLAIDCPPPAMAEVERQLGINEDVLRWLTVRVEELDLELSPLLA 105
>gi|317177988|dbj|BAJ55777.1| 30S ribosomal protein S6 [Helicobacter pylori F16]
Length = 142
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL--TIQRHDRDDRNDRFPR 118
+ P+ I E++R RI+E+VLR + + +S ++ + R ++ + +
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKRSSHAKEKH 120
Query: 119 DRNVDRKQHVSEEK 132
++ H +EE
Sbjct: 121 EKTEHTHSHHTEEA 134
>gi|224026731|ref|ZP_03645097.1| hypothetical protein BACCOPRO_03488 [Bacteroides coprophilus DSM
18228]
gi|224019967|gb|EEF77965.1| hypothetical protein BACCOPRO_03488 [Bacteroides coprophilus DSM
18228]
Length = 115
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 56/114 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++++ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDAQMKEAVDKFKAILTQEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P+ I +++ R DE V+R LT +D + + +
Sbjct: 61 QLIEFKAEPSVIEKLEINYRRDERVIRFLTFKMDKFAAEYAAKRRNVKSTKKEE 114
>gi|325996521|gb|ADZ51926.1| 30S ribosomal protein S6 [Helicobacter pylori 2018]
gi|325998109|gb|ADZ50317.1| 30S ribosomal protein S6 [Helicobacter pylori 2017]
Length = 142
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHYGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKADPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + + H
Sbjct: 121 EKTEHAHSHHAEEAKSTESHSE 142
>gi|210135405|ref|YP_002301844.1| 30S ribosomal protein S6 [Helicobacter pylori P12]
gi|226703474|sp|B6JN86|RS6_HELP2 RecName: Full=30S ribosomal protein S6
gi|210133373|gb|ACJ08364.1| 30S ribosomal protein S6 [Helicobacter pylori P12]
Length = 142
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHAEEAESVGSHSE 142
>gi|218291073|ref|ZP_03495096.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius LAA1]
gi|218238958|gb|EED06165.1| ribosomal protein S6 [Alicyclobacillus acidocaldarius LAA1]
Length = 95
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + ++Q + I +YQ+++ + GG++ + E+G R +AY I +R+ YY
Sbjct: 1 MRQYETMYIVNPSLEAEQTAEVIQRYQAIVTDKGGQIDELQEIGKRRLAYEIDGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V M E++R MRID+NV+R LT+ V
Sbjct: 61 VLMKFTCDTETPKEIERLMRIDDNVIRYLTVRVGE 95
>gi|165932623|ref|YP_001649412.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. Iowa]
gi|165907710|gb|ABY72006.1| SSU ribosomal protein S6P [Rickettsia rickettsii str. Iowa]
Length = 133
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 13 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 73 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 123
>gi|288801222|ref|ZP_06406677.1| ribosomal protein S6 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331833|gb|EFC70316.1| ribosomal protein S6 [Prevotella sp. oral taxon 299 str. F0039]
Length = 114
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 56/107 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNHYETVFILTPVLSDEQMKEAVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + P ++ ++ R DE V+R +T+ +D + + +
Sbjct: 61 CLLEFKAEPTIVNTLEIGYRRDERVIRFITVKLDKYAAEYAIKRKNK 107
>gi|311693516|gb|ADP96389.1| ribosomal protein S6 [marine bacterium HP15]
Length = 130
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S+Q+ I +Y +I E+GG+V + + G R +AY I K KA+YV MN+
Sbjct: 1 MVHPD-QSEQVPAMIERYTGVITEDGGKVHRLEDWGRRHLAYPINKIHKAHYVLMNVECS 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
AA+ E+ R ++ ++R + L D + + R+
Sbjct: 60 QAAMDELTHNFRFNDAIIRDMILRRDGADTDLSPMKASESRE 101
>gi|67004068|gb|AAY60994.1| 30S ribosomal protein S6 [Rickettsia felis URRWXCal2]
Length = 129
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 9 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIVKKEYWGLRTLAYKIGNNKKGHY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 69 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPSQILKNQSTEN 119
>gi|302036160|ref|YP_003796482.1| 30S ribosomal protein S6 [Candidatus Nitrospira defluvii]
gi|300604224|emb|CBK40556.1| 30S ribosomal protein S6 [Candidatus Nitrospira defluvii]
Length = 117
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 56/100 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE +F++R +S ++ I + + + +NG + G + +AY I++ RK Y
Sbjct: 1 MELYESLFIIRPTLSDEETTALIEKMKGTVTKNGASLERAENWGRKKLAYEIKRERKGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
V+ P A I E++R R+++++++ LT+ ++ P
Sbjct: 61 VYFYFKGPGAVIAELERAYRLEDSIIKFLTVKLEQEPAPP 100
>gi|75763192|ref|ZP_00742957.1| SSU ribosomal protein S6P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|229118964|ref|ZP_04248309.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-3]
gi|74489324|gb|EAO52775.1| SSU ribosomal protein S6P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228664489|gb|EEL19985.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-3]
Length = 113
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 78 MILNVNSNAEAINEFDRLAKINEDILRHIVVKEEE 112
>gi|295133965|ref|YP_003584641.1| 30S ribosomal protein S6 [Zunongwangia profunda SM-A87]
gi|294981980|gb|ADF52445.1| 30S ribosomal protein S6 [Zunongwangia profunda SM-A87]
Length = 112
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +Y+ + G E+ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDEQIKETVKKYEEFLVSKGAEMVSKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+P AI ++ R DE ++R LT+ +D H + ++ ++
Sbjct: 61 HLFEFKAPGEAIEPLELAFRRDERMMRYLTVKLDKHAAAWAEKRRKRIQEK 111
>gi|207110026|ref|ZP_03244188.1| 30S ribosomal protein S6 [Helicobacter pylori HPKX_438_CA4C1]
Length = 136
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 7 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ P+ I E++R RI+E+VLR + + +S ++ H DR ++ P
Sbjct: 67 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAW----HALVDRANKKPSHA 122
Query: 121 NVDRKQHVS 129
++ +
Sbjct: 123 KEKHEKPNT 131
>gi|229014640|ref|ZP_04171754.1| 30S ribosomal protein S6 [Bacillus mycoides DSM 2048]
gi|229136299|ref|ZP_04265046.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST196]
gi|229170177|ref|ZP_04297863.1| 30S ribosomal protein S6 [Bacillus cereus AH621]
gi|228613278|gb|EEK70417.1| 30S ribosomal protein S6 [Bacillus cereus AH621]
gi|228647171|gb|EEL03259.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST196]
gi|228746651|gb|EEL96540.1| 30S ribosomal protein S6 [Bacillus mycoides DSM 2048]
Length = 113
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 78 MILNVNSNSEAINEFDRLAKINEDILRHIVVKEEE 112
>gi|317013032|gb|ADU83640.1| 30S ribosomal protein S6 [Helicobacter pylori Lithuania75]
Length = 142
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHVEEAESVGSHSE 142
>gi|226309318|ref|YP_002769278.1| 30S ribosomal protein S6 [Rhodococcus erythropolis PR4]
gi|229489891|ref|ZP_04383746.1| ribosomal protein S6 [Rhodococcus erythropolis SK121]
gi|259495342|sp|C0ZV45|RS6_RHOE4 RecName: Full=30S ribosomal protein S6
gi|226188435|dbj|BAH36539.1| 30S ribosomal protein S6 [Rhodococcus erythropolis PR4]
gi|229323187|gb|EEN88953.1| ribosomal protein S6 [Rhodococcus erythropolis SK121]
Length = 95
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG + V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRQHGGTIDKVDVWGKRRLAYEILKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++I + PA + E+ R++ ++E+VLR+ L +
Sbjct: 61 AVIDINATPATVAELDRQLGLNESVLRTKVLRHNK 95
>gi|189462619|ref|ZP_03011404.1| hypothetical protein BACCOP_03311 [Bacteroides coprocola DSM 17136]
gi|198276876|ref|ZP_03209407.1| hypothetical protein BACPLE_03081 [Bacteroides plebeius DSM 17135]
gi|189430780|gb|EDU99764.1| hypothetical protein BACCOP_03311 [Bacteroides coprocola DSM 17136]
gi|198270401|gb|EDY94671.1| hypothetical protein BACPLE_03081 [Bacteroides plebeius DSM 17135]
Length = 115
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++++ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDVQMKEAVEKFKAILTQEGAEIINEENWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ + P+ I +++ R DE V+R LT +D + + + +
Sbjct: 61 QLIEFKAEPSVIEKLEVNYRRDERVIRFLTFKMDKYAAEYAAKRRNVKSTKKEE 114
>gi|258517419|ref|YP_003193641.1| 30S ribosomal protein S6 [Desulfotomaculum acetoxidans DSM 771]
gi|257781124|gb|ACV65018.1| ribosomal protein S6 [Desulfotomaculum acetoxidans DSM 771]
Length = 95
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ D+ +Q I +++ +I+ NGGE+ +++ G R +AY I R YY
Sbjct: 1 MRNYETLFIIKADLEEEQTTAVIEKFKGIIEANGGEITKLDKWGKRRLAYEINHMRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + + E+ R +I + V+R + + D
Sbjct: 61 VCVKFKAGSETSQELDRVFKITDEVIRHVIIREDE 95
>gi|205371928|ref|ZP_03224748.1| 30S ribosomal protein S6 [Bacillus coahuilensis m4-4]
Length = 97
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +I NGGE+ E G R +AY I R +Y
Sbjct: 1 MRKYEVMYIVRPNIEDEAKKALVERFSGIITTNGGEIIESKEWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
MN+ + A+ E R +I ++++R + + VD
Sbjct: 61 YIMNVQASNTDAVSEFDRLAKISDDIIRHIAVRVDE 96
>gi|300727907|ref|ZP_07061285.1| ribosomal protein S6 [Prevotella bryantii B14]
gi|299774749|gb|EFI71363.1| ribosomal protein S6 [Prevotella bryantii B14]
Length = 113
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 57/107 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+ + +++ ++ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKEAVAKFKKVLTDNGAEILNEEAWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ P +++++ R DE V+R +T+ +D + ++
Sbjct: 61 CLVEFKGEPTLVNKLETAYRRDEKVIRYITVKLDKYAAQYAEKRRKK 107
>gi|51473302|ref|YP_067059.1| 30S ribosomal protein S6 [Rickettsia typhi str. Wilmington]
gi|61216179|sp|Q68XR5|RS6_RICTY RecName: Full=30S ribosomal protein S6
gi|51459614|gb|AAU03577.1| 30S ribosomal protein S6 [Rickettsia typhi str. Wilmington]
Length = 121
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 65/111 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFTKIIKDNDGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ I E++RKM+++E+++R LT+ VDS P+ ++ ++
Sbjct: 61 YFLGIDITSNIKEELERKMKLNESIIRFLTIKVDSISSEPSPILKNQSTEN 111
>gi|308048248|ref|YP_003911814.1| 30S ribosomal protein S6P [Ferrimonas balearica DSM 9799]
gi|307630438|gb|ADN74740.1| SSU ribosomal protein S6P [Ferrimonas balearica DSM 9799]
Length = 130
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ D S+Q++ I +Y + I+++GG++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVFMVHPD-QSEQVQGMIERYTATIEKDGGKIHRLEDWGRRQLAYPIEKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
V +N + A+ E++ R ++ V+RS+ + + + +
Sbjct: 60 VLVNAEATAEAVAELETNFRYNDAVIRSMVIRTKAAVTEASPMAKAK 106
>gi|295402139|ref|ZP_06812098.1| ribosomal protein S6 [Geobacillus thermoglucosidasius C56-YS93]
gi|312112740|ref|YP_003991056.1| ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
gi|294975822|gb|EFG51441.1| ribosomal protein S6 [Geobacillus thermoglucosidasius C56-YS93]
gi|311217841|gb|ADP76445.1| ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
Length = 95
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R YY
Sbjct: 1 MRKYEIMYIIRPNLDDEARQALVDRFNNILKENGAEITNVTDWGKRRLAYEIKKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S P A+ E R RI ++++R + + +
Sbjct: 61 MIINVVSEPKAVQEFDRLARISDDIIRHIVVREEE 95
>gi|228961738|ref|ZP_04123341.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228797932|gb|EEM44942.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 113
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 18 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 78 MILNVKSNAEAINEFDRLAKINEDILRHIVVKEEE 112
>gi|332800525|ref|YP_004462024.1| 30S ribosomal protein S6 [Tepidanaerobacter sp. Re1]
gi|332698260|gb|AEE92717.1| 30S ribosomal protein S6 [Tepidanaerobacter sp. Re1]
Length = 95
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF++ + + ++K + +++ +I++ GGEV V+E G +AY I R+ +Y
Sbjct: 1 MRQYETVFIIDPEFEADEVKALVEKFKGMIEDQGGEVTEVDEWGKLRLAYPINDKREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
MN + PA +++R +I ++R L + +
Sbjct: 61 FLMNFTANPATAQDLERVYKITNGLMRYLIINKEK 95
>gi|325857464|ref|ZP_08172519.1| ribosomal protein S6 [Prevotella denticola CRIS 18C-A]
gi|327314150|ref|YP_004329587.1| 30S ribosomal protein S6 [Prevotella denticola F0289]
gi|325483174|gb|EGC86154.1| ribosomal protein S6 [Prevotella denticola CRIS 18C-A]
gi|326946235|gb|AEA22120.1| ribosomal protein S6 [Prevotella denticola F0289]
Length = 114
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRKLLADNGAEILNEEAWGLKKLAYNIQKKSSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P+ I+ ++ R DE V+R +T+ D + +
Sbjct: 61 ALLEFNAEPSVIYTLETAFRRDEKVIRYITVKQDKYSAA 99
>gi|297380426|gb|ADI35313.1| ribosomal protein S6 [Helicobacter pylori v225d]
Length = 137
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P+ ++H
Sbjct: 61 YVAYFKAEPSMILELERLYRINEDVLRFIVIKYESKKEVGAWHALVDRANKKPSHAKEKH 120
Query: 108 DRDDRNDRFPRDRN 121
++ + +
Sbjct: 121 EKTEHTHSHHTEEA 134
>gi|253573876|ref|ZP_04851218.1| 30S ribosomal protein S6 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251846353|gb|EES74359.1| 30S ribosomal protein S6 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 94
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + ++ T+ ++Q +IQ NGGE+ LG R +AY I K R Y
Sbjct: 1 MRKYEVMYIIRPDVEQEAVQATVEKFQGIIQ-NGGEITKHEVLGKRRLAYEINKVRDGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +N + P + E++R ++I + V+R L
Sbjct: 60 VLVNFTAAPEVVAELERILKISDEVIRYLITK 91
>gi|149372599|ref|ZP_01891711.1| 30S ribosomal protein S6 [unidentified eubacterium SCB49]
gi|149354642|gb|EDM43206.1| 30S ribosomal protein S6 [unidentified eubacterium SCB49]
Length = 112
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ ++ G ++ + G++ ++Y I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSEDQIKETVKKYEDILVSGGAKMISKEDWGLKKLSYAIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
M P I++++ R DE V+R LT+ +D H + +R +RD +
Sbjct: 61 HLMEYQVPGEVINDLELAFRRDERVMRYLTVKLDKH--AIAWAEKRRNRDKQK 111
>gi|225011729|ref|ZP_03702167.1| ribosomal protein S6 [Flavobacteria bacterium MS024-2A]
gi|225004232|gb|EEG42204.1| ribosomal protein S6 [Flavobacteria bacterium MS024-2A]
Length = 112
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++ + ++ I+ N G + G++ +AY I + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIEEAVQKFVEFIKTNQGSMTSQENWGLKKLAYPIENKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
A+P A+ ++ + R DE ++R LT+ +D H
Sbjct: 61 HLFEYAAPSEAVAALEVEFRRDERIMRYLTVKLDKH 96
>gi|15607195|ref|NP_214567.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Rv]
gi|15839430|ref|NP_334467.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis CDC1551]
gi|31791230|ref|NP_853723.1| 30S ribosomal protein S6 [Mycobacterium bovis AF2122/97]
gi|121635963|ref|YP_976186.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659813|ref|YP_001281336.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|148821243|ref|YP_001285997.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis F11]
gi|167970579|ref|ZP_02552856.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|215406043|ref|ZP_03418224.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 02_1987]
gi|215413914|ref|ZP_03422576.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|215425247|ref|ZP_03423166.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T92]
gi|215432962|ref|ZP_03430881.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|215448329|ref|ZP_03435081.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|218755776|ref|ZP_03534572.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis GM 1503]
gi|219555832|ref|ZP_03534908.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T17]
gi|224988436|ref|YP_002643103.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253796968|ref|YP_003029969.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
1435]
gi|254366511|ref|ZP_04982555.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis str.
Haarlem]
gi|254548985|ref|ZP_05139432.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184909|ref|ZP_05762383.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis CPHL_A]
gi|260199046|ref|ZP_05766537.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|260203194|ref|ZP_05770685.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis K85]
gi|289441420|ref|ZP_06431164.1| SSU ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|289445579|ref|ZP_06435323.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis CPHL_A]
gi|289552302|ref|ZP_06441512.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
605]
gi|289567939|ref|ZP_06448166.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T17]
gi|289572629|ref|ZP_06452856.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis K85]
gi|289747822|ref|ZP_06507200.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
02_1987]
gi|289748518|ref|ZP_06507896.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T92]
gi|289756112|ref|ZP_06515490.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|289760151|ref|ZP_06519529.1| ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|289764167|ref|ZP_06523545.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis GM
1503]
gi|294995669|ref|ZP_06801360.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 210]
gi|297632524|ref|ZP_06950304.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN 4207]
gi|297729495|ref|ZP_06958613.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN R506]
gi|298527451|ref|ZP_07014860.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|306778344|ref|ZP_07416681.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu001]
gi|306778875|ref|ZP_07417212.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu002]
gi|306782664|ref|ZP_07420986.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu003]
gi|306787030|ref|ZP_07425352.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu004]
gi|306791588|ref|ZP_07429890.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu005]
gi|306795651|ref|ZP_07433953.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu006]
gi|306801626|ref|ZP_07438294.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu008]
gi|306805835|ref|ZP_07442503.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu007]
gi|306970232|ref|ZP_07482893.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu009]
gi|306974465|ref|ZP_07487126.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu010]
gi|307082173|ref|ZP_07491343.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu011]
gi|307082513|ref|ZP_07491626.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu012]
gi|313656824|ref|ZP_07813704.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis KZN V2475]
gi|54039531|sp|P66592|RS6_MYCBO RecName: Full=30S ribosomal protein S6
gi|54041974|sp|P66591|RS6_MYCTU RecName: Full=30S ribosomal protein S6
gi|166227352|sp|A1KEM1|RS6_MYCBP RecName: Full=30S ribosomal protein S6
gi|166227353|sp|A5TYC4|RS6_MYCTA RecName: Full=30S ribosomal protein S6
gi|254765446|sp|C1AJ76|RS6_MYCBT RecName: Full=30S ribosomal protein S6
gi|1568592|emb|CAB02531.1| PROBABLE 30S RIBOSOMAL PROTEIN S6 RPSF [Mycobacterium
tuberculosis H37Rv]
gi|13879102|gb|AAK44281.1| ribosomal protein S6 [Mycobacterium tuberculosis CDC1551]
gi|31616815|emb|CAD92916.1| PROBABLE 30S RIBOSOMAL PROTEIN S6 RPSF [Mycobacterium bovis
AF2122/97]
gi|121491610|emb|CAL70068.1| Probable 30s ribosomal protein s6 rpsF [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|134152023|gb|EBA44068.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis str.
Haarlem]
gi|148503965|gb|ABQ71774.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis H37Ra]
gi|148719770|gb|ABR04395.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis F11]
gi|224771549|dbj|BAH24355.1| 30S ribosomal protein S6 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253318471|gb|ACT23074.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
1435]
gi|289414339|gb|EFD11579.1| SSU ribosomal protein S6 [Mycobacterium tuberculosis T46]
gi|289418537|gb|EFD15738.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis CPHL_A]
gi|289436934|gb|EFD19427.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
605]
gi|289537060|gb|EFD41638.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis K85]
gi|289541692|gb|EFD45341.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T17]
gi|289688350|gb|EFD55838.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
02_1987]
gi|289689105|gb|EFD56534.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis T92]
gi|289696699|gb|EFD64128.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis EAS054]
gi|289711673|gb|EFD75689.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis GM
1503]
gi|289715715|gb|EFD79727.1| ribosomal protein S6 [Mycobacterium tuberculosis T85]
gi|298497245|gb|EFI32539.1| 30S ribosomal protein S6 [Mycobacterium tuberculosis 94_M4241A]
gi|308213487|gb|EFO72886.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu001]
gi|308328204|gb|EFP17055.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu002]
gi|308332510|gb|EFP21361.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu003]
gi|308336322|gb|EFP25173.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu004]
gi|308339925|gb|EFP28776.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu005]
gi|308343941|gb|EFP32792.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu006]
gi|308347724|gb|EFP36575.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu007]
gi|308351641|gb|EFP40492.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu008]
gi|308352348|gb|EFP41199.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu009]
gi|308356248|gb|EFP45099.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu010]
gi|308360239|gb|EFP49090.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu011]
gi|308367740|gb|EFP56591.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
SUMu012]
gi|323717392|gb|EGB26597.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis
CDC1551A]
gi|326905813|gb|EGE52746.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis W-148]
gi|328456758|gb|AEB02181.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis KZN
4207]
Length = 96
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGKRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|27904982|ref|NP_778108.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|31076865|sp|Q89A41|RS6_BUCBP RecName: Full=30S ribosomal protein S6
gi|27904380|gb|AAO27213.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 119
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D S +++ I +++ L+ G + + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIILLIHPDCS-EKLPIMIEKFKKLVIGYKGRIHRLEDWGRRQLAYSINKLHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDR 115
MNI P I ++ R D+ V+R++ + V + ++ + D+ D+ DR
Sbjct: 60 FLMNIEVPSNCIQDLSNTFRYDDLVIRNIIMHVKKSVTEISPMLKSKEDKLDKKDR 115
>gi|162022125|ref|YP_246159.2| 30S ribosomal protein S6 [Rickettsia felis URRWXCal2]
gi|91207788|sp|Q4UN64|RS6_RICFE RecName: Full=30S ribosomal protein S6
Length = 121
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIVKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIKADSISSEPSQILKNQSTEN 111
>gi|111020421|ref|YP_703393.1| 30S ribosomal protein S6 [Rhodococcus jostii RHA1]
gi|226362639|ref|YP_002780417.1| 30S ribosomal protein S6 [Rhodococcus opacus B4]
gi|123340395|sp|Q0SB51|RS6_RHOSR RecName: Full=30S ribosomal protein S6
gi|254765449|sp|C1B719|RS6_RHOOB RecName: Full=30S ribosomal protein S6
gi|110819951|gb|ABG95235.1| 30S ribosomal protein S6 [Rhodococcus jostii RHA1]
gi|226241124|dbj|BAH51472.1| 30S ribosomal protein S6 [Rhodococcus opacus B4]
Length = 95
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG++ V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRQDGGKIDKVDVWGKRRLAYEILKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++I++ PA + E+ R++ ++E+VLR+ L +
Sbjct: 61 AVIDISATPATVAELDRQLGLNESVLRTKVLRHNK 95
>gi|294813713|ref|ZP_06772356.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|294326312|gb|EFG07955.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
Length = 107
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 12 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 72 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 107
>gi|32266035|ref|NP_860067.1| 30S ribosomal protein S6 [Helicobacter hepaticus ATCC 51449]
gi|61215713|sp|Q7VIR8|RS6_HELHP RecName: Full=30S ribosomal protein S6
gi|32262084|gb|AAP77133.1| ribosomal protein S6 [Helicobacter hepaticus ATCC 51449]
Length = 137
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 73/132 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + +IK + ++ +I +NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MKFYETMFILKPTLVEVEIKARLDFFKEVIIKNGGEIETCLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + P+ I E++R RI+E +LR + + +S ++ + +++ + P
Sbjct: 61 FVIYFKAQPSLILELERNYRINEEILRFIVIKYESKKEQSAWQSLVNKANNKPEPKPTKA 120
Query: 121 NVDRKQHVSEEK 132
+ ++E+
Sbjct: 121 KKEDVAPEAKEQ 132
>gi|254459893|ref|ZP_05073309.1| ribosomal protein S6 [Rhodobacterales bacterium HTCC2083]
gi|206676482|gb|EDZ40969.1| ribosomal protein S6 [Rhodobacteraceae bacterium HTCC2083]
Length = 110
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 66/99 (66%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+ RQD+S+ Q + I + +++ +NGG++ G++T+AY+I KNRK +Y F+ +
Sbjct: 1 MIARQDLSNTQAEGLIEHFGTVLADNGGKLVDHEYWGVKTMAYKINKNRKGHYAFLRSDA 60
Query: 68 PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
P A+ EM+R MR+ E+V+R LT+ +D H + P++ +Q+
Sbjct: 61 PAPAVQEMERLMRLHEDVMRVLTIKMDDHAELPSVQMQK 99
>gi|270160071|ref|ZP_06188727.1| ribosomal protein S6 [Legionella longbeachae D-4968]
gi|289165148|ref|YP_003455286.1| 30S ribosomal protein S6 [Legionella longbeachae NSW150]
gi|269988410|gb|EEZ94665.1| ribosomal protein S6 [Legionella longbeachae D-4968]
gi|288858321|emb|CBJ12189.1| 30S ribosomal protein S6 [Legionella longbeachae NSW150]
Length = 112
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y+ +I ++ G + +LG R +AY I KA+Y
Sbjct: 1 MRHYEIMFLVHPD-QSEQVPAMVERYEGIISKHNGVIHRKEDLGRRQLAYPICDVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ MNI A+ E+K + ++ ++R+L + ++ +++
Sbjct: 60 ILMNIECSLEALEEIKNAFKYNDAIIRNLITRQKQAITTESVLMKKEKE 108
>gi|148260512|ref|YP_001234639.1| ribosomal protein S6 [Acidiphilium cryptum JF-5]
gi|166226792|sp|A5FYN8|RS6_ACICJ RecName: Full=30S ribosomal protein S6
gi|146402193|gb|ABQ30720.1| SSU ribosomal protein S6P [Acidiphilium cryptum JF-5]
Length = 158
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R +I+ QQ+ + ++ G V+ G+R +AYRI+KNRK +Y
Sbjct: 1 MPLYECVLIARSEITQQQVDTIADAVTAQVESESGAVKKREYWGLRNLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--------- 111
V + + + PA I EM+R++ ++E+VLR +T+ V+ +++P+ + R D
Sbjct: 61 VLLGLDAEPATISEMERQLGLNEDVLRFMTVRVEDIDEAPSAPLARRGEDRDRDRGFRGP 120
Query: 112 ----RNDRFPRDRNVDRKQHVSEEK 132
R D R DR+++ + ++
Sbjct: 121 KPAGRFDSGRRRGADDREEYRARDE 145
>gi|34580978|ref|ZP_00142458.1| 30S ribosomal protein S6 [Rickettsia sibirica 246]
gi|28262363|gb|EAA25867.1| 30S ribosomal protein S6 [Rickettsia sibirica 246]
Length = 121
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 111
>gi|120406964|ref|YP_956793.1| 30S ribosomal protein S6 [Mycobacterium vanbaalenii PYR-1]
gi|119959782|gb|ABM16787.1| SSU ribosomal protein S6P [Mycobacterium vanbaalenii PYR-1]
Length = 96
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 AIVDVKAEPATVSELDRQLNLNESVLRTKVMRTDKH 96
>gi|292670200|ref|ZP_06603626.1| 30S ribosomal protein S6 [Selenomonas noxia ATCC 43541]
gi|292648152|gb|EFF66124.1| 30S ribosomal protein S6 [Selenomonas noxia ATCC 43541]
Length = 124
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE +F+++ + + I ++ LIQ NGG + + G + +AY I+ N + YYV
Sbjct: 29 RLYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEIKDNTEGYYV 87
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + PA + E R M+I + +L+ + + D E+
Sbjct: 88 LLYVNAEPACVAECDRVMKITDELLKHMIVRADGVEE 124
>gi|254818593|ref|ZP_05223594.1| 30S ribosomal protein S6 [Mycobacterium intracellulare ATCC
13950]
Length = 96
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVVDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|326336348|ref|ZP_08202519.1| 30S ribosomal protein S6 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691522|gb|EGD33490.1| 30S ribosomal protein S6 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 113
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEAQIKEAVEKFENFLTSKGAEMVAKEDWGLKKLAYSIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+P I + + R DE V+R LT+ +D
Sbjct: 61 HLFEFKAPGDIIESFEVEFRRDERVMRYLTVKLDK 95
>gi|41406165|ref|NP_959001.1| 30S ribosomal protein S6 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118465214|ref|YP_879374.1| 30S ribosomal protein S6 [Mycobacterium avium 104]
gi|254773120|ref|ZP_05214636.1| 30S ribosomal protein S6 [Mycobacterium avium subsp. avium ATCC
25291]
gi|61215645|sp|Q744V6|RS6_MYCPA RecName: Full=30S ribosomal protein S6
gi|41394513|gb|AAS02384.1| RpsF [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118166501|gb|ABK67398.1| ribosomal protein S6 [Mycobacterium avium 104]
Length = 96
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGSVEKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDLKAEPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|161723851|ref|NP_359701.2| 30S ribosomal protein S6 [Rickettsia conorii str. Malish 7]
gi|20139897|sp|Q92JK3|RS6_RICCN RecName: Full=30S ribosomal protein S6
Length = 121
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 111
>gi|150025894|ref|YP_001296720.1| 30S ribosomal protein S6 [Flavobacterium psychrophilum JIP02/86]
gi|166226830|sp|A6H0P3|RS6_FLAPJ RecName: Full=30S ribosomal protein S6
gi|149772435|emb|CAL43917.1| 30S ribosomal protein S6 [Flavobacterium psychrophilum JIP02/86]
Length = 113
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + G + + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQVKETVSKFEDYLTSKGATMVSKEDWGLKKMAYEIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
P + + + R DE V+R LT+ +D H + + +R +
Sbjct: 61 HLFEFTVPGEVLIGFETEFRRDERVMRFLTVSLDKH--AISWAERRRAK 107
>gi|302390768|ref|YP_003826589.1| SSU ribosomal protein S6P [Thermosediminibacter oceani DSM 16646]
gi|302201396|gb|ADL08966.1| SSU ribosomal protein S6P [Thermosediminibacter oceani DSM 16646]
Length = 95
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L ++ + I + ++++LI+E GGEV+ ++ G R +AY I ++ YY
Sbjct: 1 MREYETMYILDPELDEESINGLVDKFKALIEERGGEVKEIDRWGKRRLAYPISHRKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V MN ++ P+A EM+R +I VLR + D
Sbjct: 61 VVMNFSATPSAAQEMERVFKITTGVLRHIIFRKDK 95
>gi|157827935|ref|YP_001494177.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|238650506|ref|YP_002916358.1| 30S ribosomal protein S6 [Rickettsia peacockii str. Rustic]
gi|166227377|sp|A8GQJ4|RS6_RICRS RecName: Full=30S ribosomal protein S6
gi|259495343|sp|C4K159|RS6_RICPU RecName: Full=30S ribosomal protein S6
gi|157800416|gb|ABV75669.1| 30S ribosomal protein S6 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|238624604|gb|ACR47310.1| 30S ribosomal protein S6 [Rickettsia peacockii str. Rustic]
Length = 121
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++RQD+S I + + +I++N G + G+RT+AY+I N+K +Y
Sbjct: 1 MSFYESVFIIRQDVSLNDIDKIVDDFAKIIKDNNGTIIKKEYWGLRTLAYKIGNNKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
F+ + E++RKM+++EN++R LT+ DS P+ ++ ++
Sbjct: 61 YFLGLDITGNVKEELERKMKLNENIIRFLTIQADSISSEPSPILKNQSTEN 111
>gi|260911680|ref|ZP_05918260.1| 30S ribosomal protein S6 [Prevotella sp. oral taxon 472 str.
F0295]
gi|260634228|gb|EEX52338.1| 30S ribosomal protein S6 [Prevotella sp. oral taxon 472 str.
F0295]
Length = 115
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDKGAEIVNEEAWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I ++ R DE V+R +T+ +D +
Sbjct: 61 CLLEFKAEPEVIKSLETGYRRDEKVIRHMTVKLDKY 96
>gi|323342370|ref|ZP_08082602.1| 30S ribosomal protein S6 [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463482|gb|EFY08676.1| 30S ribosomal protein S6 [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 96
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ + + I + +++ +NG + VNE G+R +AY I +K YY
Sbjct: 1 MRKYEVMYIVKPTLDEEARTAVIAKLHAILTDNGATIDEVNEWGLRELAYEIEDFKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V S A++E R RI+ +V+R + + D
Sbjct: 61 VVTQFTSGDEAVNEFNRLTRINNDVIRHMIVRQDE 95
>gi|318043053|ref|ZP_07975009.1| 30S ribosomal protein S6 [Synechococcus sp. CB0101]
Length = 122
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ L+ E G EV G R +AY I K+++ YV
Sbjct: 4 PYYETMYILRPDIPEEEVETHVTKYRDLVTEAGAEVLDCQMRGKRRLAYPIAKHKEGIYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + +++ MRI E+V+R LT+ D +P
Sbjct: 64 QLAHNGDGQQVATLEKAMRISEDVIRYLTVKQDGPLPAP 102
>gi|291280359|ref|YP_003497194.1| 30S ribosomal protein S6 [Deferribacter desulfuricans SSM1]
gi|290755061|dbj|BAI81438.1| 30S ribosomal protein S6 [Deferribacter desulfuricans SSM1]
Length = 125
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 57/94 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+S + Q++ LI ++ G++ G +T+AY+I+K + YY
Sbjct: 1 MRVYETLFIVKPDLSQEDANKVFEQFKELIVKHNGKILHEEVWGKKTLAYKIQKFSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + E++R+ R++E+V+R + + +D
Sbjct: 61 FLINFEAEADFPKELERRFRLNESVIRFIVIKID 94
>gi|294630310|ref|ZP_06708870.1| 30S ribosomal protein S6 [Streptomyces sp. e14]
gi|292833643|gb|EFF91992.1| 30S ribosomal protein S6 [Streptomyces sp. e14]
Length = 96
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|332881933|ref|ZP_08449575.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680168|gb|EGJ53123.1| ribosomal protein S6 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 113
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIKEAVEKFENFLTSRGAEFVSKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I + + R DE V+R LT+ +D H +
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKHAIA 99
>gi|15828450|ref|NP_302713.1| 30S ribosomal protein S6 [Mycobacterium leprae TN]
gi|221230927|ref|YP_002504343.1| 30S ribosomal protein S6 [Mycobacterium leprae Br4923]
gi|1173272|sp|P46389|RS6_MYCLE RecName: Full=30S ribosomal protein S6
gi|886305|gb|AAB53121.1| 30S ribosomal protein S6 [Mycobacterium leprae]
gi|2959412|emb|CAA17954.1| 30s ribosomal protein s6 [Mycobacterium leprae]
gi|13093880|emb|CAC32217.1| 30S ribosomal protein S6 [Mycobacterium leprae]
gi|219934034|emb|CAR72785.1| 30S ribosomal protein S6 [Mycobacterium leprae Br4923]
Length = 96
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ + ++++++GG + V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDECTVGPSLETFLNVVRKDGGAIDKVDIWGRRRLAYEISKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVIDLKAAPATVSELDRQLSLNESVLRTKVMRTDKH 96
>gi|238926738|ref|ZP_04658498.1| ribosomal protein S6 [Selenomonas flueggei ATCC 43531]
gi|238885270|gb|EEQ48908.1| ribosomal protein S6 [Selenomonas flueggei ATCC 43531]
Length = 135
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE +F+++ + + I ++ LIQ NGG++ + G + +AY I+ + YYV
Sbjct: 40 RLYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGKIEKEDRWGKKRLAYEIKDMTEGYYV 98
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + PA + E R M+I +++L+ + + D E+
Sbjct: 99 LLYVNAEPACVAECDRVMKITDDLLKHMIVRADGIEE 135
>gi|281420809|ref|ZP_06251808.1| ribosomal protein S6 [Prevotella copri DSM 18205]
gi|281405101|gb|EFB35781.1| ribosomal protein S6 [Prevotella copri DSM 18205]
Length = 114
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ ++ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFEKVLTDNGAEILNKEAWGLKKLAYNIEKKTSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I +++ R DE V+R +T+ +D + +
Sbjct: 61 SLVEFKAEPTVIAKLETAYRRDEKVIRYMTVKLDKYAAA 99
>gi|222530065|ref|YP_002573947.1| 30S ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
gi|222456912|gb|ACM61174.1| ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
Length = 96
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + + I ++++LI N G++ V E G R +AY+I K+ + YYV
Sbjct: 4 RKYETVFIISPTLDDEARANLIEKFKNLISSN-GQLLNVEEWGKRRLAYKIDKHAEGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R L + ++
Sbjct: 63 LMQFTSKPEFPRELERVYRITDGVIRFLIVKLEK 96
>gi|157694462|ref|YP_001488924.1| 30S ribosomal protein S6 [Bacillus pumilus SAFR-032]
gi|194016480|ref|ZP_03055094.1| ribosomal protein S6 [Bacillus pumilus ATCC 7061]
gi|167011243|sp|A8FJE7|RS6_BACP2 RecName: Full=30S ribosomal protein S6
gi|157683220|gb|ABV64364.1| ribosomal protein S6 [Bacillus pumilus SAFR-032]
gi|194011953|gb|EDW21521.1| ribosomal protein S6 [Bacillus pumilus ATCC 7061]
Length = 95
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K I ++ +++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYEVMYIIRPTVDDEAKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N+ S AA+ E R +I ++++R + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHIVVK 92
>gi|313902807|ref|ZP_07836204.1| SSU ribosomal protein S6P [Thermaerobacter subterraneus DSM
13965]
gi|313466927|gb|EFR62444.1| SSU ribosomal protein S6P [Thermaerobacter subterraneus DSM
13965]
Length = 97
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ R D+ + K + + Q +I + GG V V+ G R +AY I R+ +Y
Sbjct: 1 MRAYELMYITRPDLDEEAEKALLDRLQKIITDGGGTVEQVDVWGRRRLAYEIAGYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P HE++R +RI ++++R + +L +
Sbjct: 61 TVVQFQGPAGVTHELERVIRITDDIIRHIIVLREK 95
>gi|119513487|ref|ZP_01632511.1| Ribosomal protein S6 [Nodularia spumigena CCY9414]
gi|119461867|gb|EAW42880.1| Ribosomal protein S6 [Nodularia spumigena CCY9414]
Length = 113
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ +Q++ I +YQ L+ E G E + G R +AY I+K+R YV M
Sbjct: 5 YETIYILRPDLGEEQVEQAIAKYQGLLTEQGAENIEIQNRGKRRLAYEIKKHRDGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N P AI M+R MR+ E V+R LT+ D
Sbjct: 65 NYTGPGTAIAPMERAMRLSEEVIRYLTIKQD 95
>gi|86133512|ref|ZP_01052094.1| 30S ribosomal protein S6 [Polaribacter sp. MED152]
gi|85820375|gb|EAQ41522.1| 30S ribosomal protein S6 [Polaribacter sp. MED152]
Length = 113
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ ++ + G E+ + G++ +AY I+K + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIKETVQKFNDYLVSKGAEMISKEDWGLKKLAYPIQKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
I + + R D++V+R LT+ +D H + +R +R +
Sbjct: 61 HLFEFKIAGEEITAFELEFRRDDSVMRYLTVRLDKH--AAAWAEKRRERVKSTKK 113
>gi|108802329|ref|YP_642526.1| 30S ribosomal protein S6 [Mycobacterium sp. MCS]
gi|119871482|ref|YP_941434.1| 30S ribosomal protein S6 [Mycobacterium sp. KMS]
gi|126438309|ref|YP_001074000.1| 30S ribosomal protein S6 [Mycobacterium sp. JLS]
gi|108772748|gb|ABG11470.1| SSU ribosomal protein S6P [Mycobacterium sp. MCS]
gi|119697571|gb|ABL94644.1| SSU ribosomal protein S6P [Mycobacterium sp. KMS]
gi|126238109|gb|ABO01510.1| SSU ribosomal protein S6P [Mycobacterium sp. JLS]
Length = 96
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 AVIDVKAAPATVTELDRQLSLNESVLRTKVMRTDKH 96
>gi|325285227|ref|YP_004261017.1| 30S ribosomal protein S6 [Cellulophaga lytica DSM 7489]
gi|324320681|gb|ADY28146.1| 30S ribosomal protein S6 [Cellulophaga lytica DSM 7489]
Length = 112
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + + G ++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDVQIEETVKKFEDFLIKKGSKMVAKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P I+ + + R DE V+R LT+ +D H S
Sbjct: 61 HLFEFTAPGDVINGYELEFRRDERVMRFLTVKLDKHAIS 99
>gi|281424415|ref|ZP_06255328.1| ribosomal protein S6 [Prevotella oris F0302]
gi|281401684|gb|EFB32515.1| ribosomal protein S6 [Prevotella oris F0302]
Length = 114
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ ++ ++ R DE V+R +T+ +D +
Sbjct: 61 CLIEFKGEPSIVNTLETGYRRDEKVIRYMTVRLDKY 96
>gi|317503267|ref|ZP_07961322.1| 30S ribosomal protein S6 [Prevotella salivae DSM 15606]
gi|315665624|gb|EFV05236.1| 30S ribosomal protein S6 [Prevotella salivae DSM 15606]
Length = 114
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRNLLTDNGAEILNEEIWGLKKMAYAIEKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ ++ ++ R DE V+R +T+ +D +
Sbjct: 61 CLVEFKGEPSIVNTLETGFRRDEKVIRYMTVRLDKY 96
>gi|89890854|ref|ZP_01202363.1| 30S ribosomal protein S6 [Flavobacteria bacterium BBFL7]
gi|89516999|gb|EAS19657.1| 30S ribosomal protein S6 [Flavobacteria bacterium BBFL7]
Length = 114
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+ + ++++ + G ++ + G++ +AY I + +Y
Sbjct: 1 MNQYETVFILNPVLSDDQVKEAVKKFENFLTTRGAKMVAKEDWGLKKLAYTIENKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
P I++ + + R DE V+R LT+ +D + +R DR
Sbjct: 61 TLFQFEVPGEVINDFEVEFRRDERVMRYLTVKLDKYAIE--WAAKRRDR 107
>gi|240168783|ref|ZP_04747442.1| 30S ribosomal protein S6 [Mycobacterium kansasii ATCC 12478]
Length = 96
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMIILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGRRRLAYEIAKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 61 VVVDLKAAPATVSELDRQLSLNESVLRTKVMRADKH 96
>gi|308184993|ref|YP_003929126.1| 30S ribosomal protein S6 [Helicobacter pylori SJM180]
gi|308060913|gb|ADO02809.1| 30S ribosomal protein S6 [Helicobacter pylori SJM180]
Length = 142
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ + ++IK I Y+ +I ++ G + ++GMR +AY I+K+++ YY
Sbjct: 1 MRHYETMFILKPTLVEEEIKSKIEFYREVITKHHGVIETSLDMGMRNLAYEIKKHKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-------------VDSHEQSPTLTIQRH 107
+ P+ I E++R RI+E+VLR + + VD + P ++H
Sbjct: 61 YVAYFKAEPSMIVELERLYRINEDVLRFIVIKYESKKEVEAWHALVDRANKKPPHAKEKH 120
Query: 108 DRDDRNDRFPRDRNVDRKQHVS 129
++ + + H
Sbjct: 121 EKTEHTHSHHAEEAESVGSHSE 142
>gi|299140846|ref|ZP_07033984.1| ribosomal protein S6 [Prevotella oris C735]
gi|298577812|gb|EFI49680.1| ribosomal protein S6 [Prevotella oris C735]
Length = 114
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY I K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEILNEEAWGLKKMAYAIDKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P+ I+ ++ R DE V+R +T+ +D +
Sbjct: 61 CLIEFKGEPSIINTLETGYRRDEKVIRYMTVRLDKY 96
>gi|302552667|ref|ZP_07305009.1| ribosomal protein S6 [Streptomyces viridochromogenes DSM 40736]
gi|302470285|gb|EFL33378.1| ribosomal protein S6 [Streptomyces viridochromogenes DSM 40736]
Length = 96
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDVEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|237753479|ref|ZP_04583959.1| 30S ribosomal protein S6 [Helicobacter winghamensis ATCC BAA-430]
gi|229375746|gb|EEO25837.1| 30S ribosomal protein S6 [Helicobacter winghamensis ATCC BAA-430]
Length = 128
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 66/126 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++I I Y++ I NGGE+ ++GMR +AY I+KN++ YY
Sbjct: 1 MRFYETMFVVKPTLTQEEITQKIDFYKAAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + P + E++R RI+E +LR + + +S ++ + P
Sbjct: 61 FVIYFKAEPKLVLELERLYRINEEILRFIVIKYESKKEQKAWETLVDRAINNKKSTPLKE 120
Query: 121 NVDRKQ 126
D+ Q
Sbjct: 121 VEDKPQ 126
>gi|300777790|ref|ZP_07087648.1| 30S ribosomal protein S6 [Chryseobacterium gleum ATCC 35910]
gi|300503300|gb|EFK34440.1| 30S ribosomal protein S6 [Chryseobacterium gleum ATCC 35910]
Length = 113
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 56/113 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ LI+E E+ G++ +AY I+ + +Y
Sbjct: 1 MNNYETVFILTPVLSDAQVEEAVKKFEDLIKEKNCEIVAKENWGLKKLAYPIQLKKNGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
+ + + +++ + DE V+R LT +D H +T + + +
Sbjct: 61 TLIEFKGEGSVVADLELAFKRDERVIRYLTTKLDKHAVEYAVTRRAKVKAAKA 113
>gi|296330020|ref|ZP_06872504.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676744|ref|YP_003868416.1| ribosomal protein S6 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153059|gb|EFG93924.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414988|gb|ADM40107.1| ribosomal protein S6 [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 95
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEVMYIIRPNIDEESKKAVIERFSNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I ++++R + + +
Sbjct: 61 QIVNVQADAAAVQEFDRLAKISDDIIRHIVVKEEE 95
>gi|319651083|ref|ZP_08005217.1| ribosomal protein S6 [Bacillus sp. 2_A_57_CT2]
gi|317397253|gb|EFV77957.1| ribosomal protein S6 [Bacillus sp. 2_A_57_CT2]
Length = 95
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +++ +NG EV + G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPNIEDEAKKALVERFNTILTDNGAEVSESKDWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
MN+ + A+ E R +I E+++R + + +
Sbjct: 61 QLMNVNAEAKAVDEFTRLAKISEDIIRYIVVKDEK 95
>gi|254430452|ref|ZP_05044155.1| ribosomal protein S6 [Cyanobium sp. PCC 7001]
gi|197624905|gb|EDY37464.1| ribosomal protein S6 [Cyanobium sp. PCC 7001]
Length = 119
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ I +Y+ L+ E GGEV G R +AY I K+R+ YV
Sbjct: 4 PYYETMYILRPDIPEEEVESHITKYRDLVIEAGGEVLDCQMRGKRRLAYSIDKHREGIYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+N + ++R MR+ E+V+R LT+ D +P
Sbjct: 64 QLNHNGDGQQVAPLERAMRLSEDVIRYLTVKQDGPMPAP 102
>gi|188997590|ref|YP_001931841.1| ribosomal protein S6 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932657|gb|ACD67287.1| ribosomal protein S6 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 104
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S ++IK + + LIQ+N GE+ G R +AY I K YY
Sbjct: 1 MRHYELVFVLKPTLSEEEIKTRVQAIKDLIQQNQGEIYNEENWGRRNLAYPINKFNSGYY 60
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N ++ +RI+E+V+R L + +
Sbjct: 61 FLINFKTGNSNLPATLEYNLRINEDVIRFLNMKLK 95
>gi|260893968|ref|YP_003240065.1| ribosomal protein S6 [Ammonifex degensii KC4]
gi|260866109|gb|ACX53215.1| ribosomal protein S6 [Ammonifex degensii KC4]
Length = 95
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + ++ + +++ ++++ GG V ++ G R +AY I K R+ Y
Sbjct: 1 MRAYETMYIVRPQVEGEALEAVVEKFKKIVEDGGGTVVSIDRWGKRRLAYPIEKEREGQY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ M + P + E+ R +I +VLR + + D
Sbjct: 61 IVMRFQAEPPVVQELDRVFKITGDVLRHIIVREDE 95
>gi|91070594|gb|ABE11494.1| 30S ribosomal protein S6 [uncultured Prochlorococcus marinus clone
HOT0M-8F9]
Length = 157
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 12 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R +T+ + +P + + + + D N
Sbjct: 72 SHQGDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSNKSTSQSESKD------NPV 125
Query: 124 RKQHVSEEKPLS 135
K E++P++
Sbjct: 126 PKVESKEKQPVA 137
>gi|210624076|ref|ZP_03294176.1| hypothetical protein CLOHIR_02128 [Clostridium hiranonis DSM
13275]
gi|210153209|gb|EEA84215.1| hypothetical protein CLOHIR_02128 [Clostridium hiranonis DSM
13275]
Length = 94
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++++ + + + + + +I+ NGGEV V+ G R +AY I K + +Y
Sbjct: 1 MRDYELVYVVKPVLDEETREGVQNKIKEIIETNGGEVTKVDAWGNRKLAYPIAKFTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + E+ R ++I+ENV+R + ++ D
Sbjct: 61 TLVNFKASVELPKELDRNLKINENVIRHMVVVCD 94
>gi|288927612|ref|ZP_06421459.1| ribosomal protein S6 [Prevotella sp. oral taxon 317 str. F0108]
gi|288330446|gb|EFC69030.1| ribosomal protein S6 [Prevotella sp. oral taxon 317 str. F0108]
Length = 115
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDKGAEIVNEEAWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I ++ R DE V+R + + +D +
Sbjct: 61 CLLEFKAEPEVIKSLETGYRRDEKVIRHMVVKLDKY 96
>gi|121535341|ref|ZP_01667153.1| ribosomal protein S6 [Thermosinus carboxydivorans Nor1]
gi|121306033|gb|EAX46963.1| ribosomal protein S6 [Thermosinus carboxydivorans Nor1]
Length = 94
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + + I ++++LI+ NGG V ++ G R +AY ++ + YY
Sbjct: 1 MRKYEVIFIVKP-LDEEATNAVIAKFENLIKNNGGNVEKIDRWGKRRLAYPVKDFTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P A+ E++R M+I + +LR + + D
Sbjct: 60 CVIYFDAEPKAVFELERVMKITDEILRHMVVKEDE 94
>gi|296141834|ref|YP_003649077.1| ribosomal protein S6 [Tsukamurella paurometabola DSM 20162]
gi|296029968|gb|ADG80738.1| ribosomal protein S6 [Tsukamurella paurometabola DSM 20162]
Length = 94
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 57/93 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V ++ G R +AY I KN + Y
Sbjct: 1 MRKYELMVILDPSLDERTVAPSLETFLNVVRKDGGTVSNIDIWGKRRLAYEITKNSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+++ + PA ++E+ R+++++E+VLR+ L
Sbjct: 61 AVIDLTAEPATVNELDRQLKLNESVLRTKVLRQ 93
>gi|258655466|ref|YP_003204622.1| 30S ribosomal protein S6 [Nakamurella multipartita DSM 44233]
gi|258558691|gb|ACV81633.1| ribosomal protein S6 [Nakamurella multipartita DSM 44233]
Length = 102
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 55/94 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L ++ + + +I + ++I++ GG V V+ G R +A+ I+KN + Y
Sbjct: 8 RHYELLLILDPNLDERTVAPSIDTFLNVIRQGGGSVENVDIWGKRRLAFEIKKNPEGIYA 67
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P A + E+ R++ ++E+VLR+ + D+
Sbjct: 68 VIKVTCPSAVVTELDRQLNLNESVLRTKIIRPDA 101
>gi|255035776|ref|YP_003086397.1| 30S ribosomal protein S6 [Dyadobacter fermentans DSM 18053]
gi|254948532|gb|ACT93232.1| ribosomal protein S6 [Dyadobacter fermentans DSM 18053]
Length = 126
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE VF+L +S Q KD + ++ ++I NG ++ G+R +AY I+K +Y
Sbjct: 3 KQYETVFILTPILSEAQAKDAVEKFTTIITSNGAQIVHEENWGLRKLAYPIQKKNSGFYH 62
Query: 62 FMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + + ++ + R DE VLR +T+ +D H + ++ + + +
Sbjct: 63 VVEYTANEGNVVDVLETEFRRDERVLRFMTIALDKHSIAYNEKKRKGLVGKKKEEATESK 122
>gi|146296357|ref|YP_001180128.1| ribosomal protein S6 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145409933|gb|ABP66937.1| SSU ribosomal protein S6P [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 124
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + + I ++++LI N G++ V E G R +AY+I K+ + YYV
Sbjct: 32 RKYETVFIISPTLDDEARANLIEKFKNLISSN-GQLLTVEEWGKRRLAYKIDKHAEGYYV 90
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R L + ++
Sbjct: 91 LMQFISKPEFPRELERVYRITDGVIRFLIVKLEK 124
>gi|256820493|ref|YP_003141772.1| 30S ribosomal protein S6 [Capnocytophaga ochracea DSM 7271]
gi|315223594|ref|ZP_07865449.1| 30S ribosomal protein S6 [Capnocytophaga ochracea F0287]
gi|256582076|gb|ACU93211.1| ribosomal protein S6 [Capnocytophaga ochracea DSM 7271]
gi|314946510|gb|EFS98504.1| 30S ribosomal protein S6 [Capnocytophaga ochracea F0287]
Length = 113
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSDTQIKEAVEKFENFLTSRGAEFVAKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKHAIE 99
>gi|56422017|ref|YP_149335.1| 30S ribosomal protein S6 [Geobacillus kaustophilus HTA426]
gi|261420891|ref|YP_003254573.1| 30S ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297531676|ref|YP_003672951.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|319768562|ref|YP_004134063.1| ribosomal protein S6 [Geobacillus sp. Y412MC52]
gi|61215358|sp|Q5KU69|RS6_GEOKA RecName: Full=30S ribosomal protein S6
gi|56381859|dbj|BAD77767.1| 30S ribosomal protein S6 (BS9) [Geobacillus kaustophilus HTA426]
gi|261377348|gb|ACX80091.1| ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297254928|gb|ADI28374.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|317113428|gb|ADU95920.1| ribosomal protein S6 [Geobacillus sp. Y412MC52]
Length = 95
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++ENG E+ V + G R +AY I+K R YY
Sbjct: 1 MRKYEIMYIIRPNMDDEARQALVERFNNVLKENGAEITNVTDWGKRRLAYEIQKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S P A+ E R RI E+++R + + +
Sbjct: 61 MIVNVVSEPKAVQEFDRLARISEDIIRHIVVKEEE 95
>gi|323345546|ref|ZP_08085769.1| 30S ribosomal protein S6 [Prevotella oralis ATCC 33269]
gi|323093660|gb|EFZ36238.1| 30S ribosomal protein S6 [Prevotella oralis ATCC 33269]
Length = 114
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ L+ +NG E+ G++ +AY+I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFKKLLTDNGAEIVNEEAWGLKKMAYQIQKKTSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
P +++++ R DE V+R +T+ +D +
Sbjct: 61 CLFEFKGEPTIVNKLETGYRRDEKVIRYITVSLDKY 96
>gi|78780184|ref|YP_398296.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9312]
gi|91207929|sp|Q317T5|RS6_PROM9 RecName: Full=30S ribosomal protein S6
gi|78713683|gb|ABB50860.1| SSU ribosomal protein S6P [Prochlorococcus marinus str. MIT 9312]
Length = 152
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MRI E+V+R +T+ + +P + + + + D N +
Sbjct: 67 SHQGDGQHIFKIEKAMRISEDVIRYMTVKQEGPLPTPKPSNKSSTQSENKD------NPE 120
Query: 124 RKQHVSEEKPLS 135
K EE+ ++
Sbjct: 121 TKVESKEEQSVT 132
>gi|326403704|ref|YP_004283786.1| 30S ribosomal protein S6 [Acidiphilium multivorum AIU301]
gi|325050566|dbj|BAJ80904.1| 30S ribosomal protein S6 [Acidiphilium multivorum AIU301]
Length = 158
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE V + R +I+ QQ+ + ++ G V+ G+R +AYRI+KNRK +Y
Sbjct: 1 MPLYECVLIARSEITQQQVDTIADAVTAQVESESGAVKKREYWGLRNLAYRIKKNRKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD--------- 111
V + + + P I EM+R++ ++E+VLR +T+ V+ +++P+ + R D
Sbjct: 61 VLLGLDAEPVTISEMERQLGLNEDVLRFMTVRVEDIDEAPSAPLARRGEDRDRDRGFRGP 120
Query: 112 ----RNDRFPRDRNVDRKQHVSEEK 132
R D R DR+++ + ++
Sbjct: 121 KPAGRFDSGRRRGADDREEYRARDE 145
>gi|311897279|dbj|BAJ29687.1| putative ribosomal protein S6 [Kitasatospora setae KM-6054]
Length = 96
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + I + ++++ GG++ ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPSVEERAVSPLIESFLNVVRTGGGKIEKIDTWGRRRLAYEINKQSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P + E+ R+ + E+VLR+ L D+H
Sbjct: 61 SVIDLKATPEVVKELDRQFSLSESVLRTKVLRPDTH 96
>gi|312621640|ref|YP_004023253.1| 30S ribosomal protein S6 [Caldicellulosiruptor kronotskyensis
2002]
gi|312202107|gb|ADQ45434.1| ribosomal protein S6 [Caldicellulosiruptor kronotskyensis 2002]
Length = 96
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + I ++++LI N G++ V E G R +AY+I K+ + YYV
Sbjct: 4 RKYETVFIISPTLDDEARNSLIEKFKNLISSN-GQLLNVEEWGKRRLAYKIDKHAEGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R L + ++
Sbjct: 63 LMQFISKPEFPRELERVYRITDGVIRFLIVKLEK 96
>gi|329938666|ref|ZP_08288062.1| 30S ribosomal protein S6 [Streptomyces griseoaurantiacus M045]
gi|329302157|gb|EGG46049.1| 30S ribosomal protein S6 [Streptomyces griseoaurantiacus M045]
Length = 96
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDVEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPGVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|319951621|ref|YP_004162888.1| ssu ribosomal protein s6p [Cellulophaga algicola DSM 14237]
gi|319420281|gb|ADV47390.1| SSU ribosomal protein S6P [Cellulophaga algicola DSM 14237]
Length = 112
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + ++ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIEETVKKFEDFLISKDAKMVSKENWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+S + + + R DE ++R LT+ +D H S
Sbjct: 61 HLFEFSSTGEVVSPFELEFRRDERIMRFLTVKLDKHAIS 99
>gi|212640666|ref|YP_002317186.1| 30S ribosomal protein S6 [Anoxybacillus flavithermus WK1]
gi|212562146|gb|ACJ35201.1| Ribosomal protein S6 [Anoxybacillus flavithermus WK1]
Length = 98
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ ENG E+ V E G R +AY I K R YY
Sbjct: 4 MRKYEIMYIIRPNMEEEARKAVVERFNNVLTENGAEITNVKEWGKRRLAYEIEKFRDGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ + PAA+ E R RI E+++R + + +
Sbjct: 64 MILNVVAKPAAVQEFDRLARISEDIIRHIVVKEEE 98
>gi|304383091|ref|ZP_07365566.1| 30S ribosomal protein S6 [Prevotella marshii DSM 16973]
gi|304335777|gb|EFM02032.1| 30S ribosomal protein S6 [Prevotella marshii DSM 16973]
Length = 115
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ ++++L+ E G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETVAKFRNLLVEKGAEIVNEETWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + P I+ ++ + R +E V+R +T+ +D +
Sbjct: 61 CLLEFKAEPEVINTLETQFRREEKVIRFMTVKLDKY 96
>gi|325291434|ref|YP_004267615.1| SSU ribosomal protein S6P [Syntrophobotulus glycolicus DSM 8271]
gi|324966835|gb|ADY57614.1| SSU ribosomal protein S6P [Syntrophobotulus glycolicus DSM 8271]
Length = 94
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R D+ +Q K + ++ ++ NGG V E G R +AY ++K + YY
Sbjct: 1 MKAYEVLYIIRPDLDEEQTKAQVTRFADIVNANGGSELKVEEWGKRRLAYEVKKFNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V MN + E++R M+I + +R LT
Sbjct: 61 VLMNFNGEANTVQELERVMKISDTAIRFLT 90
>gi|319938328|ref|ZP_08012724.1| 30S ribosomal protein S6 [Coprobacillus sp. 29_1]
gi|319806511|gb|EFW03173.1| 30S ribosomal protein S6 [Coprobacillus sp. 29_1]
Length = 94
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ D+ I ++ ++ G V VNE G+R +AY I+ K YY
Sbjct: 1 MNKYEIMFIVKPDVEEDARNAIIENFKKVLTNTEGTVDNVNEWGLRDLAYEIKDYTKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V ++ + PA I E +R RI+ N+LR LTL D
Sbjct: 61 VVLDTTTTPANIAEFERLSRINANMLRHLTLRRD 94
>gi|213962687|ref|ZP_03390948.1| ribosomal protein S6 [Capnocytophaga sputigena Capno]
gi|213954682|gb|EEB66003.1| ribosomal protein S6 [Capnocytophaga sputigena Capno]
Length = 113
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E G++ +AY I+ + +Y
Sbjct: 1 MNQYETVFILNPVLSETQIKEAVEKFENFLTSRGAEFVAKENWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I + + R DE V+R LT+ +D H
Sbjct: 61 HLFEFKVAGEVIDAFELEFRRDERVMRYLTVKLDKHAIE 99
>gi|239930202|ref|ZP_04687155.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
gi|291438546|ref|ZP_06577936.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
gi|291341441|gb|EFE68397.1| 30S ribosomal protein S6 [Streptomyces ghanaensis ATCC 14672]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|153824152|ref|ZP_01976819.1| ribosomal protein S6 [Vibrio cholerae B33]
gi|126518329|gb|EAZ75552.1| ribosomal protein S6 [Vibrio cholerae B33]
Length = 102
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y I E GG++ + + G R +AY I K KA+YV MN+ + A + E++ R
Sbjct: 1 MIERYTGSITEAGGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEADQAVVDELETAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
++ VLR++ + + P++ ++ + + D D +V+
Sbjct: 61 NDAVLRNMIMRTKAAITEPSIMLKAREERVKRDEMKFDADVE 102
>gi|89100932|ref|ZP_01173779.1| ribosomal protein S6 (BS9) [Bacillus sp. NRRL B-14911]
gi|89084341|gb|EAR63495.1| ribosomal protein S6 (BS9) [Bacillus sp. NRRL B-14911]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ S++ +NG E+ + G R +AY I R YY
Sbjct: 1 MRKYEIMYVIRPNIEDEAKKALVERFNSILTDNGAELTESKDWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + AA+ E R +I E+++R + + +
Sbjct: 61 QLIHLNAEAAAVDEFTRLAKISEDIIRHMVVKDEK 95
>gi|218441702|ref|YP_002380031.1| ribosomal protein S6 [Cyanothece sp. PCC 7424]
gi|226703448|sp|B7KD42|RS6_CYAP7 RecName: Full=30S ribosomal protein S6
gi|218174430|gb|ACK73163.1| ribosomal protein S6 [Cyanothece sp. PCC 7424]
Length = 176
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V++LR D+ +Q++ I +Y+ + EN + + G R +AY I+K + +YV M
Sbjct: 5 YEMVYILRPDLLEEQVQQEINRYRDFLTENEAQEVQIKYWGKRRLAYPIKKLQDGFYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
N I ++R MR+ + V+R LT+ +D + +P ND P + +D
Sbjct: 65 NYQGDGKQIAPLERMMRLSDEVIRYLTIKLDKDQYTP------------NDSPPPEGIID 112
Query: 124 RKQHVSE 130
+ V E
Sbjct: 113 TPKPVIE 119
>gi|167629779|ref|YP_001680278.1| 30S ribosomal protein s6 [Heliobacterium modesticaldum Ice1]
gi|226703473|sp|B0TE72|RS6_HELMI RecName: Full=30S ribosomal protein S6
gi|167592519|gb|ABZ84267.1| 30S ribosomal protein s6 [Heliobacterium modesticaldum Ice1]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 58/96 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+R ++ + ++ I ++ +L+ + GGEV V++ G R + Y ++K ++A+Y
Sbjct: 1 MREYEAVVLVRPNLEEEALQGVIDKFVNLVPQQGGEVVKVDKWGKRRLQYEVKKFKEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N PA E++R M+I ++++R L + D
Sbjct: 61 FLLNFKGEPAVAQELERVMKISDDIIRFLVVRKDEQ 96
>gi|145221468|ref|YP_001132146.1| 30S ribosomal protein S6 [Mycobacterium gilvum PYR-GCK]
gi|315446780|ref|YP_004079659.1| 30S ribosomal protein S6P [Mycobacterium sp. Spyr1]
gi|145213954|gb|ABP43358.1| SSU ribosomal protein S6P [Mycobacterium gilvum PYR-GCK]
gi|315265083|gb|ADU01825.1| SSU ribosomal protein S6P [Mycobacterium sp. Spyr1]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGSVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ + + H
Sbjct: 61 AIIDVKAEPATVSELDRQLNLNESVLRTKVMRTEKH 96
>gi|312792726|ref|YP_004025649.1| 30S ribosomal protein S6 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877714|ref|ZP_07737668.1| ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795515|gb|EFR11890.1| ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
gi|312179866|gb|ADQ40036.1| ribosomal protein S6 [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + + ++++LI N G++ V E G R +AY+I K+ + YYV
Sbjct: 4 RKYETVFIISPTLDDEARNALVEKFKNLISSN-GQLLTVEEWGKRRLAYKIDKHAEGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R L + ++
Sbjct: 63 LMQFISKPEFPRELERVYRITDGVIRFLIVKLEK 96
>gi|257461421|ref|ZP_05626517.1| 30S ribosomal protein S6 [Campylobacter gracilis RM3268]
gi|257441144|gb|EEV16291.1| 30S ribosomal protein S6 [Campylobacter gracilis RM3268]
Length = 137
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ ++ ++K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MRNYEVLFIVKPTLTDDEVKTKVDFVKEIITKNGGEIASVIEMGARKLAYKIDKYERGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV---------DSHEQSPTLTIQRHDRDD 111
+ + P+ I E+ R +RI E+++R LT+ D + L+ + +R+
Sbjct: 61 FVIYFKAEPSLISELVRNLRITEDIIRFLTVKYETKREISAWDKLSKGIKLSPAKKEREP 120
Query: 112 RNDRFPRDRNVDRKQHV 128
+ P++ K+
Sbjct: 121 KAPVEPKEPEEAAKEGE 137
>gi|311070631|ref|YP_003975554.1| 30S ribosomal protein S6 [Bacillus atrophaeus 1942]
gi|310871148|gb|ADP34623.1| 30S ribosomal protein S6 [Bacillus atrophaeus 1942]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYEVMYIIRPNVDDESKKAVVERFNNVLTSNGAEITGTKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S AA+ E R +I ++++R + + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHVVVKEEE 95
>gi|317164471|gb|ADV08012.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 105
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 19 IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRK 78
+ + +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++
Sbjct: 1 MPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVGELETA 60
Query: 79 MRIDENVLRSLTLLVDSHEQSPTLTI 104
R ++ VLR LT+ + +
Sbjct: 61 FRFNDAVLRHLTIKTKHAVTEASPML 86
>gi|16081143|ref|NP_391971.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312073|ref|ZP_03593920.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
168]
gi|221316398|ref|ZP_03598203.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221321311|ref|ZP_03602605.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221325594|ref|ZP_03606888.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313651|ref|YP_004205938.1| 30S ribosomal protein S6 [Bacillus subtilis BSn5]
gi|585949|sp|P21468|RS6_BACSU RecName: Full=30S ribosomal protein S6; AltName: Full=BS9
gi|467375|dbj|BAA05221.1| ribosomal protein S6 [Bacillus subtilis]
gi|2636638|emb|CAB16128.1| ribosomal protein S6 (BS9) [Bacillus subtilis subsp. subtilis
str. 168]
gi|291486728|dbj|BAI87803.1| 30S ribosomal protein S6 [Bacillus subtilis subsp. natto BEST195]
gi|320019925|gb|ADV94911.1| 30S ribosomal protein S6 [Bacillus subtilis BSn5]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S AA+ E R +I ++++R + + +
Sbjct: 61 QIVNVQSDAAAVQEFDRLAKISDDIIRHIVVKEEE 95
>gi|320353928|ref|YP_004195267.1| ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
gi|320122430|gb|ADW17976.1| ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
Length = 141
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+LR ++ Q + I + ++I + G + ++ G++ +AY I K + YY
Sbjct: 1 MRHYETTFILRPNLGEDQFTEIIDRTTAIINGDEGSIICLDRWGIKRLAYEINKEVQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH--DRDDRNDRFPR 118
V++N A+P + E++R RID+ VLR LT+ + + + ++
Sbjct: 61 VYLNYAAPGKTVDEIERIFRIDDRVLRYLTVKLGDSMNAAAIEAEKQRIAEKAAAREKAL 120
Query: 119 DRNVDRKQHVSEE 131
+ + + SEE
Sbjct: 121 SEDAENDEFDSEE 133
>gi|282898577|ref|ZP_06306565.1| Ribosomal protein S6 [Cylindrospermopsis raciborskii CS-505]
gi|281196445|gb|EFA71354.1| Ribosomal protein S6 [Cylindrospermopsis raciborskii CS-505]
Length = 108
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++LR D+ Q+ I +YQ+L+ E G E + G R +AY I ++R YV
Sbjct: 5 YETTYILRPDLGDDQVDQAIVKYQNLLNEQGAENLEIQNRGKRRLAYEINRHRDGVYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
N +P AI +R MR++E+V+R LT+ + +P
Sbjct: 65 NYTAPAGAIAVFERSMRLNEDVIRYLTVKQEVKTTAP 101
>gi|302535599|ref|ZP_07287941.1| ribosomal protein S6 [Streptomyces sp. C]
gi|302444494|gb|EFL16310.1| ribosomal protein S6 [Streptomyces sp. C]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVLDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|228473934|ref|ZP_04058675.1| ribosomal protein S6 [Capnocytophaga gingivalis ATCC 33624]
gi|228274448|gb|EEK13289.1| ribosomal protein S6 [Capnocytophaga gingivalis ATCC 33624]
Length = 113
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+ + ++++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEAQIKEAVEKFENFLTSKGAEMVAKEDWGLKKLAYSIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+P I + + R DE V+R LT+ ++ ++ +R +
Sbjct: 61 HLFEFKAPGDIIESFEVEFRRDERVMRYLTVRLEK--EAIAWAEKRRAK 107
>gi|52082636|ref|YP_081427.1| 30S ribosomal protein S6 [Bacillus licheniformis ATCC 14580]
gi|52788035|ref|YP_093864.1| 30S ribosomal protein S6 [Bacillus licheniformis ATCC 14580]
gi|319648502|ref|ZP_08002718.1| 30S ribosomal protein S6 [Bacillus sp. BT1B_CT2]
gi|81690793|sp|Q65CP3|RS6_BACLD RecName: Full=30S ribosomal protein S6
gi|52005847|gb|AAU25789.1| ribosomal protein S6 (BS9) [Bacillus licheniformis ATCC 14580]
gi|52350537|gb|AAU43171.1| RpsF [Bacillus licheniformis ATCC 14580]
gi|317389581|gb|EFV70392.1| 30S ribosomal protein S6 [Bacillus sp. BT1B_CT2]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + K + ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MRKYEIMYIIRPDVDEESKKAVVERFNNILTTNGAEITETKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I ++++R + + +
Sbjct: 61 QILNVQAGAEAVQEFDRLAKISDDIIRHIVVKEEE 95
>gi|73667309|ref|YP_303325.1| 30S ribosomal protein S6 [Ehrlichia canis str. Jake]
gi|91207915|sp|Q3YRC8|RS6_EHRCJ RecName: Full=30S ribosomal protein S6
gi|72394450|gb|AAZ68727.1| SSU ribosomal protein S6P [Ehrlichia canis str. Jake]
Length = 109
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 60/108 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYTIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ I + P+++ E KRK+R++E+VLR L L D + +L IQ +
Sbjct: 61 CMIYIKATPSSMDEFKRKVRLNEDVLRFLCLKKDKLPKGDSLMIQANQ 108
>gi|30265492|ref|NP_847869.1| 30S ribosomal protein S6 [Bacillus anthracis str. Ames]
gi|47531060|ref|YP_022409.1| 30S ribosomal protein S6 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188311|ref|YP_031564.1| 30S ribosomal protein S6 [Bacillus anthracis str. Sterne]
gi|49481194|ref|YP_039464.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145282|ref|YP_086739.1| 30S ribosomal protein S6 [Bacillus cereus E33L]
gi|165873021|ref|ZP_02217642.1| ribosomal protein S6 [Bacillus anthracis str. A0488]
gi|167635107|ref|ZP_02393424.1| ribosomal protein S6 [Bacillus anthracis str. A0442]
gi|167641752|ref|ZP_02399995.1| ribosomal protein S6 [Bacillus anthracis str. A0193]
gi|170689457|ref|ZP_02880647.1| ribosomal protein S6 [Bacillus anthracis str. A0465]
gi|170707585|ref|ZP_02898038.1| ribosomal protein S6 [Bacillus anthracis str. A0389]
gi|177655277|ref|ZP_02936831.1| ribosomal protein S6 [Bacillus anthracis str. A0174]
gi|190569298|ref|ZP_03022192.1| ribosomal protein S6 [Bacillus anthracis Tsiankovskii-I]
gi|196036113|ref|ZP_03103513.1| ribosomal protein S6 [Bacillus cereus W]
gi|196041953|ref|ZP_03109240.1| ribosomal protein S6 [Bacillus cereus NVH0597-99]
gi|196045561|ref|ZP_03112792.1| ribosomal protein S6 [Bacillus cereus 03BB108]
gi|206975820|ref|ZP_03236731.1| 30S ribosomal protein S6 [Bacillus cereus H3081.97]
gi|217962967|ref|YP_002341545.1| 30S ribosomal protein S6 [Bacillus cereus AH187]
gi|218906666|ref|YP_002454500.1| ribosomal protein S6 [Bacillus cereus AH820]
gi|222098951|ref|YP_002533009.1| 30S ribosomal protein s6 [Bacillus cereus Q1]
gi|225867455|ref|YP_002752833.1| 30S ribosomal protein S6 [Bacillus cereus 03BB102]
gi|227818243|ref|YP_002818252.1| 30S ribosomal protein S6 [Bacillus anthracis str. CDC 684]
gi|228918086|ref|ZP_04081614.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228949196|ref|ZP_04111464.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094585|ref|ZP_04225652.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-42]
gi|229124977|ref|ZP_04254151.1| 30S ribosomal protein S6 [Bacillus cereus 95/8201]
gi|229142223|ref|ZP_04270747.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST26]
gi|229187703|ref|ZP_04314839.1| 30S ribosomal protein S6 [Bacillus cereus BGSC 6E1]
gi|229602976|ref|YP_002869683.1| 30S ribosomal protein S6 [Bacillus anthracis str. A0248]
gi|254687085|ref|ZP_05150943.1| 30S ribosomal protein S6 [Bacillus anthracis str. CNEVA-9066]
gi|254724132|ref|ZP_05185917.1| 30S ribosomal protein S6 [Bacillus anthracis str. A1055]
gi|254735149|ref|ZP_05192859.1| 30S ribosomal protein S6 [Bacillus anthracis str. Western North
America USA6153]
gi|254742142|ref|ZP_05199829.1| 30S ribosomal protein S6 [Bacillus anthracis str. Kruger B]
gi|254755948|ref|ZP_05207980.1| 30S ribosomal protein S6 [Bacillus anthracis str. Vollum]
gi|254761372|ref|ZP_05213394.1| 30S ribosomal protein S6 [Bacillus anthracis str. Australia 94]
gi|300118824|ref|ZP_07056544.1| 30S ribosomal protein S6 [Bacillus cereus SJ1]
gi|301056948|ref|YP_003795159.1| 30S ribosomal protein S6 [Bacillus anthracis CI]
gi|61215455|sp|Q630C8|RS6_BACCZ RecName: Full=30S ribosomal protein S6
gi|61215550|sp|Q6HAG2|RS6_BACHK RecName: Full=30S ribosomal protein S6
gi|61215741|sp|Q81JI2|RS6_BACAN RecName: Full=30S ribosomal protein S6
gi|226703417|sp|B7JIK1|RS6_BACC0 RecName: Full=30S ribosomal protein S6
gi|226703420|sp|B7HZG1|RS6_BACC7 RecName: Full=30S ribosomal protein S6
gi|254765218|sp|C3P3E5|RS6_BACAA RecName: Full=30S ribosomal protein S6
gi|254765219|sp|C3LGT1|RS6_BACAC RecName: Full=30S ribosomal protein S6
gi|254765220|sp|C1ER67|RS6_BACC3 RecName: Full=30S ribosomal protein S6
gi|254765221|sp|B9IT32|RS6_BACCQ RecName: Full=30S ribosomal protein S6
gi|30260170|gb|AAP29355.1| 30S ribosomal protein S6 [Bacillus anthracis str. Ames]
gi|47506208|gb|AAT34884.1| ribosomal protein S6 [Bacillus anthracis str. 'Ames Ancestor']
gi|49182238|gb|AAT57614.1| ribosomal protein S6 [Bacillus anthracis str. Sterne]
gi|49332750|gb|AAT63396.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978751|gb|AAU20301.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus cereus
E33L]
gi|164711233|gb|EDR16789.1| ribosomal protein S6 [Bacillus anthracis str. A0488]
gi|167510306|gb|EDR85709.1| ribosomal protein S6 [Bacillus anthracis str. A0193]
gi|167529581|gb|EDR92331.1| ribosomal protein S6 [Bacillus anthracis str. A0442]
gi|170127581|gb|EDS96455.1| ribosomal protein S6 [Bacillus anthracis str. A0389]
gi|170666559|gb|EDT17332.1| ribosomal protein S6 [Bacillus anthracis str. A0465]
gi|172080204|gb|EDT65296.1| ribosomal protein S6 [Bacillus anthracis str. A0174]
gi|190559605|gb|EDV13596.1| ribosomal protein S6 [Bacillus anthracis Tsiankovskii-I]
gi|195991280|gb|EDX55248.1| ribosomal protein S6 [Bacillus cereus W]
gi|196023768|gb|EDX62444.1| ribosomal protein S6 [Bacillus cereus 03BB108]
gi|196027208|gb|EDX65828.1| ribosomal protein S6 [Bacillus cereus NVH0597-99]
gi|206745914|gb|EDZ57310.1| 30S ribosomal protein S6 [Bacillus cereus H3081.97]
gi|217064055|gb|ACJ78305.1| ribosomal protein S6 [Bacillus cereus AH187]
gi|218538036|gb|ACK90434.1| ribosomal protein S6 [Bacillus cereus AH820]
gi|221243010|gb|ACM15720.1| ribosomal protein S6 (30S ribosomal protein S6) [Bacillus cereus
Q1]
gi|225786761|gb|ACO26978.1| 30S ribosomal protein S6 [Bacillus cereus 03BB102]
gi|227005886|gb|ACP15629.1| 30S ribosomal protein S6 [Bacillus anthracis str. CDC 684]
gi|228595771|gb|EEK53455.1| 30S ribosomal protein S6 [Bacillus cereus BGSC 6E1]
gi|228641241|gb|EEK97548.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST26]
gi|228658478|gb|EEL14144.1| 30S ribosomal protein S6 [Bacillus cereus 95/8201]
gi|228688832|gb|EEL42663.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-42]
gi|228810479|gb|EEM56832.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228841566|gb|EEM86682.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229267384|gb|ACQ49021.1| 30S ribosomal protein S6 [Bacillus anthracis str. A0248]
gi|298723792|gb|EFI64514.1| 30S ribosomal protein S6 [Bacillus cereus SJ1]
gi|300379117|gb|ADK08021.1| 30S ribosomal protein S6 [Bacillus cereus biovar anthracis str.
CI]
Length = 96
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ + AI+E R +I+E++LR + + +
Sbjct: 61 MILNVNANAEAINEFDRLAKINEDILRHIVVKEEE 95
>gi|327403001|ref|YP_004343839.1| 30S ribosomal protein S6P [Fluviicola taffensis DSM 16823]
gi|327318509|gb|AEA43001.1| SSU ribosomal protein S6P [Fluviicola taffensis DSM 16823]
Length = 115
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q K+ + +Y+S + GG++ G++ +AY I+K +Y
Sbjct: 1 MNSYETVFILTPVLSEDQAKEAVQKYESELAAMGGKLTHSESWGLKKLAYPIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I +++ M+ DE ++R LT+ +D
Sbjct: 61 FLFQFDGEGSVIADLELIMKRDERIMRFLTVKMDK 95
>gi|87301535|ref|ZP_01084375.1| 30S ribosomal protein S6 [Synechococcus sp. WH 5701]
gi|87283752|gb|EAQ75706.1| 30S ribosomal protein S6 [Synechococcus sp. WH 5701]
Length = 117
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ L+ E G EV G R +AY I K+R+ YV
Sbjct: 5 PYYETMYILRPDIPEEEVETHVAKYRDLLTEAGAEVLDCQMRGKRRLAYTIAKHREGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+N + ++R MR+ E+V+R LT+ D +P
Sbjct: 65 QLNHDGDGQQVALLERAMRLSEDVIRYLTVKQDGPLPTP 103
>gi|308175797|ref|YP_003922502.1| 30S ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens DSM 7]
gi|307608661|emb|CBI45032.1| ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens DSM 7]
gi|328555773|gb|AEB26265.1| 30S ribosomal protein S6 [Bacillus amyloliquefaciens TA208]
gi|328914162|gb|AEB65758.1| ribosomal protein S6 (BS9) [Bacillus amyloliquefaciens LL3]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MKKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S AA+ E R +I ++++R + + +
Sbjct: 61 QILNVQSDAAAVSEFDRLAKISDDIIRHIVVKEEE 95
>gi|312889161|ref|ZP_07748718.1| SSU ribosomal protein S6P [Mucilaginibacter paludis DSM 18603]
gi|311298323|gb|EFQ75435.1| SSU ribosomal protein S6P [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 58/118 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S + K+ + ++ ++ +NG E+ + G+R +AY I K YY
Sbjct: 1 MQQYETVIILTPLLSVETAKEAVAKFTKILTDNGAEIIQEDNWGLRKLAYPIEKKTTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
+P I++++ + R DE ++R LT+ +D H + + + + +
Sbjct: 61 HLTEFKAPGELINKLEIEYRRDERIMRFLTIALDKHATAYNDKKRSGAFNQKKPKTEE 118
>gi|134301137|ref|YP_001114633.1| 30S ribosomal protein S6 [Desulfotomaculum reducens MI-1]
gi|189045464|sp|A4J9Q5|RS6_DESRM RecName: Full=30S ribosomal protein S6
gi|134053837|gb|ABO51808.1| SSU ribosomal protein S6P [Desulfotomaculum reducens MI-1]
Length = 95
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 59/92 (64%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ ++ +++ + +++S+++E G EV +++ G R +AY I K ++ Y
Sbjct: 1 MRNYEVMYIIKPEVEEEKVTALMEKFKSVVEEKGAEVTKLDKWGKRRLAYEINKIKEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V M + PAA E+ R M+I+++++R + +
Sbjct: 61 VLMQFKAEPAASAELDRVMKINDDIVRHMIIR 92
>gi|328883729|emb|CCA56968.1| SSU ribosomal protein S6p [Streptomyces venezuelae ATCC 10712]
Length = 96
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|313205959|ref|YP_004045136.1| SSU ribosomal protein s6p [Riemerella anatipestifer DSM 15868]
gi|312445275|gb|ADQ81630.1| SSU ribosomal protein S6P [Riemerella anatipestifer DSM 15868]
gi|315022272|gb|EFT35300.1| SSU ribosomal protein S6p [Riemerella anatipestifer RA-YM]
gi|325336602|gb|ADZ12876.1| Ribosomal protein S6 [Riemerella anatipestifer RA-GD]
Length = 113
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 53/113 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + +++ L+++ E+ G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILTPVLSDAQVEEAVKKFEDLLKDQNCEIVAKENWGLKKLAYPIQLKKNGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
+ + +++ + DE V+R LT +D H + + +
Sbjct: 61 TLIEFKGEGTIVADLELAFKRDERVIRYLTTKLDKHAVEYAEKRRAKLKSKKA 113
>gi|260881439|ref|ZP_05404415.2| ribosomal protein S6 [Mitsuokella multacida DSM 20544]
gi|260848789|gb|EEX68796.1| ribosomal protein S6 [Mitsuokella multacida DSM 20544]
Length = 95
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + I ++ +LIQ NGG + + G + +AY I+ + YY
Sbjct: 1 MRKYEVIFIVKP-MEEDATNAVIEKFSNLIQNNGGTIDKEDRWGKKRLAYEIKDCTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
N+ PA + E R M+I + +L+ + + D
Sbjct: 60 CLFNVTCEPACVAECDRVMKITDELLKHMIVKSDEE 95
>gi|311112590|ref|YP_003983812.1| 30S ribosomal protein S6 [Rothia dentocariosa ATCC 17931]
gi|310944084|gb|ADP40378.1| 30S ribosomal protein S6 [Rothia dentocariosa ATCC 17931]
Length = 119
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG + ++ G R +AY I+K + Y
Sbjct: 20 MRAYELMVILNPEVEDRAVEPSLSKFLEIVTNAGGTIDNLDIWGRRRLAYEIQKKSEGIY 79
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + P E+ R + ++E+V+R+ + +
Sbjct: 80 AVVNFTASPETAAELDRVLNLNESVMRTKIIRPE 113
>gi|229816200|ref|ZP_04446510.1| hypothetical protein COLINT_03247 [Collinsella intestinalis DSM
13280]
gi|229808208|gb|EEP44000.1| hypothetical protein COLINT_03247 [Collinsella intestinalis DSM
13280]
Length = 97
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + + I E G+V V+E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPSLDPETRLAVMKRIDNTIAEGNGKVDNVDEWGKRKLAYEIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + PA+I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPASIAELDRVLRITDAVIRHMIVRRDDQE 97
>gi|210634871|ref|ZP_03298346.1| hypothetical protein COLSTE_02275 [Collinsella stercoris DSM
13279]
gi|210158586|gb|EEA89557.1| hypothetical protein COLSTE_02275 [Collinsella stercoris DSM
13279]
Length = 97
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + ++ + + + + I E G+V V+E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPNLDPETRLAVMKRIDTTIAEGNGKVDNVDEWGKRKLAYAIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + PA+I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPASIAELDRVLRITDAVIRHMIVRRDDQE 97
>gi|254391456|ref|ZP_05006658.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|326442135|ref|ZP_08216869.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
gi|197705145|gb|EDY50957.1| 30S ribosomal protein S6 [Streptomyces clavuligerus ATCC 27064]
Length = 96
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|154688195|ref|YP_001423356.1| 30S ribosomal protein S6 [Bacillus amyloliquefaciens FZB42]
gi|166226800|sp|A7ZAU9|RS6_BACA2 RecName: Full=30S ribosomal protein S6
gi|154354046|gb|ABS76125.1| RpsF [Bacillus amyloliquefaciens FZB42]
Length = 95
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I + K I ++ +++ NG E+ + G R +AY I R +Y
Sbjct: 1 MKKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEINDFRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S AA+ E R +I ++++R + + +
Sbjct: 61 QILNVQSEAAAVAEFDRLAKISDDIIRHIVVKEEE 95
>gi|315453473|ref|YP_004073743.1| putative 30S ribosomal protein S6 [Helicobacter felis ATCC 49179]
gi|315132525|emb|CBY83153.1| putative 30S ribosomal protein S6 [Helicobacter felis ATCC 49179]
Length = 140
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ + ++IK+ + YQ I + GG + ++G+R +AY I+K ++ YY
Sbjct: 1 MKHYETMFILKSTMVEEEIKEKLAFYQEAINKQGGVIEATLDMGIRQLAYEIKKQKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + A+ E++R RI+E+VLR + L +S ++ DR +
Sbjct: 61 FVIYFKAQAHAVLELERLYRINEDVLRFIILKYESKKEQKAWQT-------LVDRALKKP 113
Query: 121 NVDRKQHVSEEKPLS 135
+ KQ + E+ P S
Sbjct: 114 GTETKQRLKEQAPES 128
>gi|332654783|ref|ZP_08420525.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
gi|332516126|gb|EGJ45734.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
Length = 98
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++L +S + I + +++++++ N G V ++E G R +AY I + YYV
Sbjct: 6 ANYEAMYILDPALSEEAIAALVAKFKAVVEAN-GTVSEIDEWGKRRLAYPINDLMEGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
M + A E+ R RI + V+RSL + D
Sbjct: 65 LMTFNAAAAIPAELDRIFRITDGVMRSLIVCKD 97
>gi|169631972|ref|YP_001705621.1| 30S ribosomal protein S6 [Mycobacterium abscessus ATCC 19977]
gi|226695103|sp|B1MMI2|RS6_MYCA9 RecName: Full=30S ribosomal protein S6
gi|169243939|emb|CAM64967.1| 30S ribosomal protein S6 [Mycobacterium abscessus]
Length = 96
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++ +GG V V G R +AY I K+ + Y
Sbjct: 1 MRQYEIMVILDPTLDERTVAPSLDTFLNVVRGDGGTVSKVEVWGKRRLAYEIAKHTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + PA + E+ R++ ++E+VLR+ L +
Sbjct: 61 AVIDVVAAPATVSELDRQLGLNESVLRTKVLRTGA 95
>gi|22298822|ref|NP_682069.1| 30S ribosomal protein S6 [Thermosynechococcus elongatus BP-1]
gi|32171538|sp|Q8DJE6|RS6_THEEB RecName: Full=30S ribosomal protein S6
gi|22295003|dbj|BAC08831.1| 30S ribosomal protein S6 [Thermosynechococcus elongatus BP-1]
Length = 114
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 57/90 (63%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R D+ +Q++ TI Q+++ ++E G V G R AY I+K R+ YY+
Sbjct: 4 RNYETLYIIRPDVGEEQLEQTISQFRTFLEEQGATKLKVQNRGKRRFAYPIKKLREGYYI 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
M +P AI ++R MR++EN+LR +T+
Sbjct: 64 LMTYTAPGTAIAPLERAMRLNENILRFMTI 93
>gi|254673113|emb|CBA07856.1| 30S ribosomal protein S6 [Neisseria meningitidis alpha275]
Length = 110
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 19 IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRK 78
+ + +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++
Sbjct: 1 MPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETA 60
Query: 79 MRIDENVLRSLTLLVDSHEQSPTLTI 104
R ++ VLR LT+ + +
Sbjct: 61 FRFNDAVLRHLTIKTKHAVTEASPML 86
>gi|254384803|ref|ZP_05000140.1| 30S ribosomal protein S6 [Streptomyces sp. Mg1]
gi|297193322|ref|ZP_06910720.1| 30S ribosomal protein S6 [Streptomyces pristinaespiralis ATCC
25486]
gi|194343685|gb|EDX24651.1| 30S ribosomal protein S6 [Streptomyces sp. Mg1]
gi|197718360|gb|EDY62268.1| 30S ribosomal protein S6 [Streptomyces pristinaespiralis ATCC
25486]
Length = 96
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|67921027|ref|ZP_00514546.1| Ribosomal protein S6 [Crocosphaera watsonii WH 8501]
gi|67857144|gb|EAM52384.1| Ribosomal protein S6 [Crocosphaera watsonii WH 8501]
Length = 111
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+LR D+S Q+ + Y+ + N V G R +AY I+K YV
Sbjct: 5 YEMIFILRPDLSEDQVNQALNSYKEFLTTNNATNLEVKIWGKRRLAYPIQKKVDGIYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
N + I ++R MR+ E V+R LT+ +D+ S
Sbjct: 65 NYEADGTQIAPLERMMRLGEEVMRYLTIRLDTVAPS 100
>gi|238061879|ref|ZP_04606588.1| 30S ribosomal protein S6 [Micromonospora sp. ATCC 39149]
gi|237883690|gb|EEP72518.1| 30S ribosomal protein S6 [Micromonospora sp. ATCC 39149]
Length = 96
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + PAA+ E+ R++R++E+VLR+ + +
Sbjct: 61 AVVDLQATPAAVAELDRQLRLNESVLRTKVIRPE 94
>gi|311032236|ref|ZP_07710326.1| 30S ribosomal protein S6 [Bacillus sp. m3-13]
Length = 96
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I K ++ +++ +NG ++ E G R +AY I R YY
Sbjct: 1 MNKYEIMYIIRPNIEEDAKKALTERFNTILTDNGADLTESKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +N+A+ PAA+ E R +I E+++R + + +
Sbjct: 61 MLVNVAAEPAAVQEFDRLAKISEDIIRHIVVKKE 94
>gi|81298823|ref|YP_399031.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 7942]
gi|123557696|sp|Q31SC5|RS6_SYNE7 RecName: Full=30S ribosomal protein S6
gi|81167704|gb|ABB56044.1| SSU ribosomal protein S6P [Synechococcus elongatus PCC 7942]
Length = 107
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ I +YQ+L+ E G EV+ G R +AY I K R+ YV +
Sbjct: 6 YETMYILRADLTEEQVEQAIAKYQTLLTEAGAEVQDTQHRGKRRLAYLINKQREGIYVQI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
N + I ++R +R+ E VLR LT+ + +P
Sbjct: 66 NYTGDGSQIAPLERALRLSEEVLRFLTVKQEVRPPAPVA 104
>gi|304405907|ref|ZP_07387565.1| ribosomal protein S6 [Paenibacillus curdlanolyticus YK9]
gi|304345150|gb|EFM10986.1| ribosomal protein S6 [Paenibacillus curdlanolyticus YK9]
Length = 95
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ + ++ + ++ +I GGEV + +G R +AY I K R Y
Sbjct: 1 MRKYEVMYILRSDVEQEAVQAIVEKFNGIITNGGGEVSKTDIIGKRRLAYEINKQRDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V ++ ++P I E+ R M+I + V R+L +
Sbjct: 61 VLVHFSAPAEVIVELDRVMKIADEVFRTLIVK 92
>gi|289422468|ref|ZP_06424311.1| ribosomal protein S6 [Peptostreptococcus anaerobius 653-L]
gi|289157040|gb|EFD05662.1| ribosomal protein S6 [Peptostreptococcus anaerobius 653-L]
Length = 96
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++++ + + + + +++I E GEV V+ G R +AY I+K R Y
Sbjct: 1 MKAYELLYIVKPTLDDEAREAVLESIKNIITEANGEVGEVDVWGSRKLAYPIQKFRDGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + E+ R+++I E+V+R + + D
Sbjct: 61 TLVNFKATVDFPKELDRRLKISEDVIRHIIVAQDE 95
>gi|186685611|ref|YP_001868807.1| 30S ribosomal protein S6 [Nostoc punctiforme PCC 73102]
gi|226695106|sp|B2J6T8|RS6_NOSP7 RecName: Full=30S ribosomal protein S6
gi|186468063|gb|ACC83864.1| ribosomal protein S6 [Nostoc punctiforme PCC 73102]
Length = 116
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++LR D+ +Q + I +YQ+L+++ G E + G R +AY I+K+R Y+
Sbjct: 4 NYETMYILRPDLGDEQAEQAITKYQNLLRDQGAEDIQIQNRGKRRLAYEIKKHRDGIYIQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N +P AI +R MR+ E V+R LT+ D
Sbjct: 64 LNYTAPATAIAPFERAMRLSEEVIRYLTIKQD 95
>gi|297627499|ref|YP_003689262.1| 30S ribosomal protein S6 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296923264|emb|CBL57861.1| 30S ribosomal protein S6 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 104
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ D+ +Q++ + +Y ++I + GG V V+ G R +AY I+K + Y
Sbjct: 10 MRKYEVMAIISPDVDERQLQPIVDKYTAIITKEGGTVDNVDIWGRRHLAYPIQKKTEGLY 69
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ PA++ EM R M IDE V+R+ + +DS
Sbjct: 70 AVIDLTCEPASVSEMNRLMGIDEQVMRTKVMRIDS 104
>gi|78042831|ref|YP_358907.1| 30S ribosomal protein S6 [Carboxydothermus hydrogenoformans
Z-2901]
gi|91207906|sp|Q3AG27|RS6_CARHZ RecName: Full=30S ribosomal protein S6
gi|77994946|gb|ABB13845.1| ribosomal protein S6 [Carboxydothermus hydrogenoformans Z-2901]
Length = 96
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 56/94 (59%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++L ++ +++ + I +++ +I++ GGEV ++ G R AY I+K R+ YYV
Sbjct: 3 RQYEVMYILHPELDAEKTESIIERFKGMIEQEGGEVTKIDRWGKRRFAYEIKKLREGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
MN + E+ R +RI ++V+R + + D
Sbjct: 63 VMNFKAKAETAQELDRLLRISDDVVRHIVIREDK 96
>gi|68171813|ref|ZP_00545151.1| Ribosomal protein S6 [Ehrlichia chaffeensis str. Sapulpa]
gi|88658444|ref|YP_507129.1| 30S ribosomal protein S6 [Ehrlichia chaffeensis str. Arkansas]
gi|123493682|sp|Q2GHF4|RS6_EHRCR RecName: Full=30S ribosomal protein S6
gi|67998762|gb|EAM85476.1| Ribosomal protein S6 [Ehrlichia chaffeensis str. Sapulpa]
gi|88599901|gb|ABD45370.1| ribosomal protein S6 [Ehrlichia chaffeensis str. Arkansas]
Length = 109
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYTIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ I + P+++ E KRK+R++E++LR L L D + +L IQ
Sbjct: 61 CMIYIKATPSSMDEFKRKVRLNEDILRFLCLKKDKLPKGDSLMIQASQ 108
>gi|282898434|ref|ZP_06306424.1| Ribosomal protein S6 [Raphidiopsis brookii D9]
gi|281196600|gb|EFA71506.1| Ribosomal protein S6 [Raphidiopsis brookii D9]
Length = 108
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++LR D+ Q+ I +YQ+L+ E G E V G R +AY I ++R YV
Sbjct: 5 YETTYILRSDLGDDQVDQAIVKYQNLLNEQGAENLEVQNRGKRRLAYEINRHRDGVYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
N +P +AI +R MR++E+V+R LT+ +P+
Sbjct: 65 NYTAPASAIAVFERSMRLNEDVIRYLTVKQGVKAIAPS 102
>gi|229496130|ref|ZP_04389851.1| ribosomal protein S6 [Porphyromonas endodontalis ATCC 35406]
gi|229316961|gb|EEN82873.1| ribosomal protein S6 [Porphyromonas endodontalis ATCC 35406]
Length = 115
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QQ+K+T+ ++ L++E G E+ G++ +AY I K +Y
Sbjct: 1 MNSYETVFILTPVLSDQQMKETVQKFVDLLKEQGSEIVNEENWGLKMLAYPIDKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + P+ I +++ R DE VLR LT+ D
Sbjct: 61 QFVEFNAEPSVIKKLEVNFRRDERVLRFLTIRQDK 95
>gi|196249875|ref|ZP_03148571.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
gi|196210751|gb|EDY05514.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
Length = 95
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + + + ++ ++++E G E+ V + G R +AY I K R YY
Sbjct: 1 MRKYEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEKYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ + P A+ E R RI E+++R + + +
Sbjct: 61 MILNVMAEPQAVQEFDRLARISEDIIRHIVVKEEK 95
>gi|239942697|ref|ZP_04694634.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
gi|239989156|ref|ZP_04709820.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 11379]
gi|291446161|ref|ZP_06585551.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
gi|291349108|gb|EFE76012.1| 30S ribosomal protein S6 [Streptomyces roseosporus NRRL 15998]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|218900615|ref|YP_002449026.1| ribosomal protein S6 [Bacillus cereus G9842]
gi|228905418|ref|ZP_04069373.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 4222]
gi|228911313|ref|ZP_04075117.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 200]
gi|228942623|ref|ZP_04105155.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228968626|ref|ZP_04129609.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228975553|ref|ZP_04136105.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982189|ref|ZP_04142478.1| 30S ribosomal protein S6 [Bacillus thuringiensis Bt407]
gi|229035132|ref|ZP_04189078.1| 30S ribosomal protein S6 [Bacillus cereus AH1271]
gi|229099901|ref|ZP_04230824.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-29]
gi|229106066|ref|ZP_04236681.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-28]
gi|226703418|sp|B7IS18|RS6_BACC2 RecName: Full=30S ribosomal protein S6
gi|218541892|gb|ACK94286.1| ribosomal protein S6 [Bacillus cereus G9842]
gi|228677352|gb|EEL31614.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-28]
gi|228683516|gb|EEL37471.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-29]
gi|228728198|gb|EEL79228.1| 30S ribosomal protein S6 [Bacillus cereus AH1271]
gi|228777541|gb|EEM25819.1| 30S ribosomal protein S6 [Bacillus thuringiensis Bt407]
gi|228784163|gb|EEM32190.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791055|gb|EEM38673.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228817049|gb|EEM63142.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228848331|gb|EEM93181.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 200]
gi|228854238|gb|EEM98941.1| 30S ribosomal protein S6 [Bacillus thuringiensis IBL 4222]
gi|326943272|gb|AEA19168.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIVVKEEE 95
>gi|47568673|ref|ZP_00239370.1| ribosomal protein S6 [Bacillus cereus G9241]
gi|228988702|ref|ZP_04148787.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|47554661|gb|EAL13015.1| ribosomal protein S6 [Bacillus cereus G9241]
gi|228771014|gb|EEM19495.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIIVKEEE 95
>gi|118615983|ref|YP_904315.1| 30S ribosomal protein S6 [Mycobacterium ulcerans Agy99]
gi|183980107|ref|YP_001848398.1| 30S ribosomal protein S6 RpsF [Mycobacterium marinum M]
gi|118568093|gb|ABL02844.1| 30S ribosomal protein S6 RpsF [Mycobacterium ulcerans Agy99]
gi|183173433|gb|ACC38543.1| 30S ribosomal protein S6 RpsF [Mycobacterium marinum M]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 56/95 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y
Sbjct: 1 MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + PA + E+ R++ ++E+VLR+ + D
Sbjct: 61 AVIDVKAAPATVSELDRQLSLNESVLRTKVMRADK 95
>gi|251800231|ref|YP_003014962.1| ribosomal protein S6 [Paenibacillus sp. JDR-2]
gi|247547857|gb|ACT04876.1| ribosomal protein S6 [Paenibacillus sp. JDR-2]
Length = 94
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ + ++ + ++ +I NGGEV + +G R +AY I K R YY
Sbjct: 1 MRKYEVMYIIRPDVEQENVQAIVDKFSGII-NNGGEVTKQDVIGKRRLAYEINKIRDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V ++ + ++E+ R M+I + V+RSL +
Sbjct: 60 VLVHFNATTEVVNELDRIMKITDEVIRSLIVR 91
>gi|163943154|ref|YP_001648038.1| 30S ribosomal protein S6 [Bacillus weihenstephanensis KBAB4]
gi|229026915|ref|ZP_04183238.1| 30S ribosomal protein S6 [Bacillus cereus AH1272]
gi|229164425|ref|ZP_04292353.1| 30S ribosomal protein S6 [Bacillus cereus R309803]
gi|226703421|sp|A9VTL0|RS6_BACWK RecName: Full=30S ribosomal protein S6
gi|163865351|gb|ABY46410.1| ribosomal protein S6 [Bacillus weihenstephanensis KBAB4]
gi|228619030|gb|EEK75928.1| 30S ribosomal protein S6 [Bacillus cereus R309803]
gi|228734373|gb|EEL85044.1| 30S ribosomal protein S6 [Bacillus cereus AH1272]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 61 MILNVNSNSEAINEFDRLAKINEDILRHIVVKEEE 95
>gi|262204544|ref|YP_003275752.1| 30S ribosomal protein S6 [Gordonia bronchialis DSM 43247]
gi|262087891|gb|ACY23859.1| ribosomal protein S6 [Gordonia bronchialis DSM 43247]
Length = 93
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 56/92 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ + ++++ +GG+V V+ G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPNLDERTVAPSLDTFLNVVRNDGGKVDGVDIWGKRRLAYEIAKHSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+++ + P + E+ R+++++E+VLR+ L
Sbjct: 61 AVIDLNAEPKTVTELDRQLKLNESVLRTKVLR 92
>gi|302872493|ref|YP_003841129.1| ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|312126894|ref|YP_003991768.1| 30S ribosomal protein S6 [Caldicellulosiruptor hydrothermalis
108]
gi|302575352|gb|ADL43143.1| ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|311776913|gb|ADQ06399.1| ribosomal protein S6 [Caldicellulosiruptor hydrothermalis 108]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + + ++++LI N G++ V E G R +AY+I K+ + YYV
Sbjct: 4 RKYETVFIISPALDDEARAALVEKFKNLISSN-GQLLTVEEWGKRRLAYKIDKHAEGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R L + ++
Sbjct: 63 LMQFISKPEFPRELERVYRITDGVIRFLIVKLEK 96
>gi|326383851|ref|ZP_08205535.1| 30S ribosomal protein S6 [Gordonia neofelifaecis NRRL B-59395]
gi|326197310|gb|EGD54500.1| 30S ribosomal protein S6 [Gordonia neofelifaecis NRRL B-59395]
Length = 93
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 53/92 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++ GG+V V G R +AY I K+ + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRNEGGKVDDVEIWGKRRLAYEIAKHNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + + PA + E+ R+++++E+VLR+ L
Sbjct: 61 AVVQLNATPATVSELDRQLKLNESVLRTKVLR 92
>gi|21222313|ref|NP_628092.1| 30S ribosomal protein S6 [Streptomyces coelicolor A3(2)]
gi|256786586|ref|ZP_05525017.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
gi|289770478|ref|ZP_06529856.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
gi|7388220|sp|Q9X8U2|RS6_STRCO RecName: Full=30S ribosomal protein S6
gi|4808402|emb|CAB42734.1| putative 30S ribosomal protein S6 [Streptomyces coelicolor A3(2)]
gi|289700677|gb|EFD68106.1| 30S ribosomal protein S6 [Streptomyces lividans TK24]
Length = 96
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEMH 96
>gi|302543991|ref|ZP_07296333.1| ribosomal protein S6 [Streptomyces hygroscopicus ATCC 53653]
gi|302461609|gb|EFL24702.1| ribosomal protein S6 [Streptomyces himastatinicus ATCC 53653]
Length = 96
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+I+E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVIREGNGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|147679227|ref|YP_001213442.1| 30S ribosomal protein S6 [Pelotomaculum thermopropionicum SI]
gi|189045485|sp|A5CY52|RS6_PELTS RecName: Full=30S ribosomal protein S6
gi|146275324|dbj|BAF61073.1| ribosomal protein S6 [Pelotomaculum thermopropionicum SI]
Length = 95
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 57/92 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+LR D+ ++ + I ++++LI+ +GGE+ +++ G R +AY ++ R+ +Y
Sbjct: 1 MRKYEVIFILRPDLEEEKNAEVIEKFKNLIESHGGEIIKIDKWGKRRLAYEVKDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + I + P E+ R +I + VLR + +
Sbjct: 61 IVIQINAEPKLAAELDRVFKITDEVLRHMIVR 92
>gi|87123366|ref|ZP_01079217.1| ribosomal protein S6 [Synechococcus sp. RS9917]
gi|86169086|gb|EAQ70342.1| ribosomal protein S6 [Synechococcus sp. RS9917]
Length = 122
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 56/102 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDILAEAGAEVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ + +++ MR+ E+V+R LT+ D +P +
Sbjct: 65 QLSHNGDGQQVAVLEKAMRLSEDVIRYLTVKQDGPLPAPRVM 106
>gi|320161642|ref|YP_004174867.1| 30S ribosomal protein S6 [Anaerolinea thermophila UNI-1]
gi|319995496|dbj|BAJ64267.1| 30S ribosomal protein S6 [Anaerolinea thermophila UNI-1]
Length = 94
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ I + Q I GG V + G RT+AY IRK R+ Y
Sbjct: 1 MRNYEVIFIIHPELDETASTALIEKVQGWITGAGGTVEKTDVWGKRTMAYSIRKQREGNY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V+M +A PPA ++E+ +R+ E VLR L
Sbjct: 61 VYMQVAMPPAFVNELSTNLRLTEPVLRYLI 90
>gi|312135779|ref|YP_004003117.1| 30S ribosomal protein S6 [Caldicellulosiruptor owensensis OL]
gi|311775830|gb|ADQ05317.1| ribosomal protein S6 [Caldicellulosiruptor owensensis OL]
Length = 96
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF++ + + + I ++++LI N G++ V E G + +AY+I K+ + YYV
Sbjct: 4 RKYETVFIISPTLDDEARANLIEKFKNLISSN-GQLLTVEEWGKKRLAYKIDKHAEGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P E++R RI + V+R LT+ ++
Sbjct: 63 LMQFISKPEFPRELERVYRITDGVIRFLTVKLEK 96
>gi|152977673|ref|YP_001377190.1| 30S ribosomal protein S6 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189045454|sp|A7GVN7|RS6_BACCN RecName: Full=30S ribosomal protein S6
gi|152026425|gb|ABS24195.1| ribosomal protein S6 [Bacillus cytotoxicus NVH 391-98]
Length = 95
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R ++ + K + ++ +++ NG E+ E G R +AY I R +Y
Sbjct: 1 MKKYEIMYIIRPNMEEEAQKALVERFANVLTNNGAEIINTKEWGKRRLAYEINDLRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S P A+ E R +I+E+++R + + +
Sbjct: 61 MILNVNSNPEAVKEFDRLAKINEDIIRHIVVKEEE 95
>gi|229822655|ref|YP_002884181.1| ribosomal protein S6 [Beutenbergia cavernae DSM 12333]
gi|259495326|sp|C5C661|RS6_BEUC1 RecName: Full=30S ribosomal protein S6
gi|229568568|gb|ACQ82419.1| ribosomal protein S6 [Beutenbergia cavernae DSM 12333]
Length = 96
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ ++ S+I+ GG V V+ G R +AY I K + Y
Sbjct: 1 MRNYELMIILDPEVDERTVAPSLDKFLSVIKTGGGSVDNVDIWGKRRLAYEINKRAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N+ + P E+ R++ ++E VLR+ + D+H
Sbjct: 61 AVVNLTATPDLAKELDRQLGLNEAVLRTKLIRPDAH 96
>gi|317130991|ref|YP_004097273.1| ribosomal protein S6 [Bacillus cellulosilyticus DSM 2522]
gi|315475939|gb|ADU32542.1| ribosomal protein S6 [Bacillus cellulosilyticus DSM 2522]
Length = 96
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ K+ + ++ ++ +NG EV V E G R +AY I ++ +Y
Sbjct: 1 MRKYEIMYIVRPNLEEAATKEVVERFNKVLTDNGAEVENVEEKGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N+ +P AI E R ++I++NVLR L + +
Sbjct: 61 VLLNVNAPTVAIDEFNRLIKINDNVLRHLVVREEE 95
>gi|166363872|ref|YP_001656145.1| 30S ribosomal protein S6 [Microcystis aeruginosa NIES-843]
gi|226703489|sp|B0JSQ9|RS6_MICAN RecName: Full=30S ribosomal protein S6
gi|166086245|dbj|BAG00953.1| 30S ribosomal protein S6 [Microcystis aeruginosa NIES-843]
Length = 129
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR D+ + ++ + +Y++LI E+ V G + +AY I+K YV
Sbjct: 3 NNYETLYILRPDLGEEVVQQQVERYRTLITEHSATDIQVKVWGKKRLAYPIKKLNDGVYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
MN + + M+R MR+ + V+R LTL +D P
Sbjct: 63 QMNYQASGKQVAPMERAMRLSDEVIRYLTLKLDRVVAPPA 102
>gi|309811413|ref|ZP_07705200.1| ribosomal protein S6 [Dermacoccus sp. Ellin185]
gi|308434720|gb|EFP58565.1| ribosomal protein S6 [Dermacoccus sp. Ellin185]
Length = 99
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 58/95 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ S++ ++GG V V+ G R +AY I+K + Y
Sbjct: 5 MRHYEMMIILDGELDERTVQPSLEKFLSVVTKDGGTVDNVDVWGRRRMAYDIKKKSEGIY 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ + PA E+ R++ ++E++LR+ L D+
Sbjct: 65 VVVDFNATPATAAELDRQLGLNESILRTKILRKDA 99
>gi|260885357|ref|ZP_05734878.2| ribosomal protein S6 [Prevotella tannerae ATCC 51259]
gi|260852777|gb|EEX72646.1| ribosomal protein S6 [Prevotella tannerae ATCC 51259]
Length = 114
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QQ+K+T+ +++ ++ G E+ E G++ +AY I+K +Y
Sbjct: 2 MNQYETVFILTPVLSDQQMKETVEKFKDVLTAEGAEIINEEEWGLKHLAYPIQKKSTGFY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
V + + P I +++ R DE V+R LT +D + + +R +R ++ +
Sbjct: 62 VLIEFKAEPTVIKKLEVAYRRDERVIRDLTTKLDKY--AIQYAEKRRNRKNQKE 113
>gi|254492099|ref|ZP_05105274.1| ribosomal protein S6 [Methylophaga thiooxidans DMS010]
gi|224462651|gb|EEF78925.1| ribosomal protein S6 [Methylophaga thiooxydans DMS010]
Length = 92
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y + GG + + G R +AY I K KA+YV MN+ ++E+ R
Sbjct: 1 MIERYTQTLTSQGGTIHRQEDWGRRQLAYPINKVHKAHYVLMNVECDVEQLNEVTTAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
++ V+R L + +D P+ +Q+ +
Sbjct: 61 NDAVIRHLVVNMDEAATEPSPMMQKDEEKK 90
>gi|304436797|ref|ZP_07396765.1| 30S ribosomal protein S6 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370277|gb|EFM23934.1| 30S ribosomal protein S6 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 97
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE +F+++ + I ++ LIQ NGG++ + G + +AY I+ + YY
Sbjct: 1 MRLYEVIFIVKP-MEEDVTNAVIEKFTKLIQANGGKIEKEDRWGKKRLAYEIKDMTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
V + + + PA + E R M+I +++L+ + + D E+
Sbjct: 60 VLLYVNAEPACVAECDRVMKITDDLLKHMIVRADGIEE 97
>gi|194476869|ref|YP_002049048.1| 30S ribosomal protein S6 [Paulinella chromatophora]
gi|171191876|gb|ACB42838.1| 30S ribosomal protein S6 [Paulinella chromatophora]
Length = 121
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 55/99 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ + G EV G R +AY + K+R+ YV
Sbjct: 4 PYYETMYILRPDIPEEEVESHLTKYRGIVVDAGAEVLDSQMRGKRRLAYPVDKHREGIYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
++ + ++R MR+ E+V+R LT+ + +P
Sbjct: 64 QLSHNGDGQQVAPLERAMRLSEDVIRYLTVKQEGPLPTP 102
>gi|313672480|ref|YP_004050591.1| ribosomal protein s6 [Calditerrivibrio nitroreducens DSM 19672]
gi|312939236|gb|ADR18428.1| ribosomal protein S6 [Calditerrivibrio nitroreducens DSM 19672]
Length = 144
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++ + +++ LI NGGE+ G +AY I K+++ Y
Sbjct: 1 MNTYETVFIVSPALPLDDANAIFEKFKDLISTNGGEILNSEYWGKLKMAYPINKHKEGCY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + E++ + + DENVLR + + +D +++ D + +
Sbjct: 61 YLIQYKADGKFNSELETRFKYDENVLRFVVVKLD----GKNYKLRKRDEMTKPRSRRYEE 116
Query: 121 NVDRKQHVSE 130
+ +V E
Sbjct: 117 KPQTEVNVDE 126
>gi|30023498|ref|NP_835129.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 14579]
gi|42784670|ref|NP_981917.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10987]
gi|206970119|ref|ZP_03231072.1| 30S ribosomal protein S6 [Bacillus cereus AH1134]
gi|218233563|ref|YP_002370249.1| 30S ribosomal protein S6 [Bacillus cereus B4264]
gi|228955725|ref|ZP_04117720.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229072939|ref|ZP_04206135.1| 30S ribosomal protein S6 [Bacillus cereus F65185]
gi|229082683|ref|ZP_04215137.1| 30S ribosomal protein S6 [Bacillus cereus Rock4-2]
gi|229112887|ref|ZP_04242418.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-15]
gi|229130720|ref|ZP_04259673.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-Cer4]
gi|229148024|ref|ZP_04276363.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST24]
gi|229153633|ref|ZP_04281809.1| 30S ribosomal protein S6 [Bacillus cereus m1550]
gi|229181720|ref|ZP_04309043.1| 30S ribosomal protein S6 [Bacillus cereus 172560W]
gi|229193725|ref|ZP_04320666.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10876]
gi|296505902|ref|YP_003667602.1| 30S ribosomal protein S6 [Bacillus thuringiensis BMB171]
gi|61215625|sp|Q72WV3|RS6_BACC1 RecName: Full=30S ribosomal protein S6
gi|61215739|sp|Q814G5|RS6_BACCR RecName: Full=30S ribosomal protein S6
gi|226703419|sp|B7HGD4|RS6_BACC4 RecName: Full=30S ribosomal protein S6
gi|29899059|gb|AAP12330.1| SSU ribosomal protein S6P [Bacillus cereus ATCC 14579]
gi|42740602|gb|AAS44525.1| ribosomal protein S6 [Bacillus cereus ATCC 10987]
gi|206734696|gb|EDZ51865.1| 30S ribosomal protein S6 [Bacillus cereus AH1134]
gi|218161520|gb|ACK61512.1| ribosomal protein S6 [Bacillus cereus B4264]
gi|228589750|gb|EEK47628.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 10876]
gi|228601753|gb|EEK59251.1| 30S ribosomal protein S6 [Bacillus cereus 172560W]
gi|228629819|gb|EEK86472.1| 30S ribosomal protein S6 [Bacillus cereus m1550]
gi|228635449|gb|EEK91940.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-ST24]
gi|228652737|gb|EEL08622.1| 30S ribosomal protein S6 [Bacillus cereus BDRD-Cer4]
gi|228670566|gb|EEL25879.1| 30S ribosomal protein S6 [Bacillus cereus Rock1-15]
gi|228700628|gb|EEL53160.1| 30S ribosomal protein S6 [Bacillus cereus Rock4-2]
gi|228710185|gb|EEL62163.1| 30S ribosomal protein S6 [Bacillus cereus F65185]
gi|228803953|gb|EEM50577.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|296326954|gb|ADH09882.1| 30S ribosomal protein S6 [Bacillus thuringiensis BMB171]
gi|324329425|gb|ADY24685.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 96
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 61 MILNVKSNAEAINEFDRLAKINEDILRHIVVKEEE 95
>gi|330470802|ref|YP_004408545.1| ribosomal protein s6 [Verrucosispora maris AB-18-032]
gi|328813773|gb|AEB47945.1| ribosomal protein s6 [Verrucosispora maris AB-18-032]
Length = 96
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + P A+ E+ R++R++E+VLR+ + +
Sbjct: 61 AVVDLQATPEAVAELDRQLRLNESVLRTKVIRPE 94
>gi|317123156|ref|YP_004103159.1| 30S ribosomal protein S6P [Thermaerobacter marianensis DSM 12885]
gi|315593136|gb|ADU52432.1| SSU ribosomal protein S6P [Thermaerobacter marianensis DSM 12885]
Length = 97
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ R D+ + K + + Q ++ + GG V V+ G R +AY I R+ +Y
Sbjct: 1 MRAYELMYITRPDLDEEAEKALLDRLQKIVVDGGGSVEQVDVWGRRRLAYEIAGYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P HE++R +R+ ++++R + +L +
Sbjct: 61 TVVQFQGPAGVTHELERVIRLSDDIIRHIIVLREK 95
>gi|302559693|ref|ZP_07312035.1| 30S ribosomal protein S6 [Streptomyces griseoflavus Tu4000]
gi|302477311|gb|EFL40404.1| 30S ribosomal protein S6 [Streptomyces griseoflavus Tu4000]
Length = 96
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D + + I + S++++ GG+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDTEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|300866122|ref|ZP_07110847.1| 30S ribosomal protein S6 [Oscillatoria sp. PCC 6506]
gi|300335883|emb|CBN56005.1| 30S ribosomal protein S6 [Oscillatoria sp. PCC 6506]
Length = 114
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 55/92 (59%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ + + I +YQ+++++ G + G R +AY I+K R Y+ M
Sbjct: 6 YETMYILRPDLGEELTEAAIAKYQTILRDQGAQNLETQHRGKRRLAYEIQKQRDGIYIQM 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N +P AI ++R MR+ E+V+R LT+ D+
Sbjct: 66 NYTAPGTAIAILERAMRLSEDVIRYLTIKQDA 97
>gi|291297663|ref|YP_003508941.1| 30S ribosomal protein S6 [Stackebrandtia nassauensis DSM 44728]
gi|290566883|gb|ADD39848.1| ribosomal protein S6 [Stackebrandtia nassauensis DSM 44728]
Length = 96
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ +Q+ ++ + +I E GG V ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERQVTPSLENFLKVISEAGGAVENLDIWGRRRLAYEINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N+ S PAA+ EM+R+MR++E+++R+ L +
Sbjct: 61 AVANLQSEPAAVAEMERQMRLNESIMRTKVLRPE 94
>gi|297158764|gb|ADI08476.1| 30S ribosomal protein S6 [Streptomyces bingchenggensis BCW-1]
Length = 96
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|331700357|ref|YP_004336596.1| 30S ribosomal protein S6 [Pseudonocardia dioxanivorans CB1190]
gi|326955046|gb|AEA28743.1| 30S ribosomal protein S6 [Pseudonocardia dioxanivorans CB1190]
Length = 109
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 57/98 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ + ++++ +GG V V G R +AY I KN +A Y
Sbjct: 4 MRHYEVMVILDPSLDERTVQPSLETFLNVVRTDGGSVEKVEVWGKRRLAYEIAKNAEAIY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + PA + E+ R++ ++E+VLR+ L + +Q
Sbjct: 64 AILEVTAEPATVAELDRQLGLNESVLRTKVLRREPRKQ 101
>gi|303228730|ref|ZP_07315550.1| ribosomal protein S6 [Veillonella atypica ACS-134-V-Col7a]
gi|303231522|ref|ZP_07318251.1| ribosomal protein S6 [Veillonella atypica ACS-049-V-Sch6]
gi|302513768|gb|EFL55781.1| ribosomal protein S6 [Veillonella atypica ACS-049-V-Sch6]
gi|302516604|gb|EFL58526.1| ribosomal protein S6 [Veillonella atypica ACS-134-V-Col7a]
Length = 94
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +++ + I + ++LI GG V V+ G R +AY ++K +Y
Sbjct: 1 MNKYEVMVIVKP-AEEEATNAVIEKVEALIARVGGTVEKVDRWGKRRLAYAVKKFTDGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + PA I E+ R ++I+++VLR L + D+
Sbjct: 60 VLVNFEADPAEIKEIDRVLKINDDVLRHLIVKHDA 94
>gi|283458979|ref|YP_003363628.1| 30S ribosomal protein S6 [Rothia mucilaginosa DY-18]
gi|283135043|dbj|BAI65808.1| ribosomal protein S6 [Rothia mucilaginosa DY-18]
Length = 120
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 53/99 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG V V+ G R +AY I+K + Y
Sbjct: 20 MRAYELMVILSPEVEDRAVEPSLSKFLEIVTNEGGSVDNVDIWGRRRLAYEIQKKSEGIY 79
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+N S P E+ R + ++E+V+R+ + + + S
Sbjct: 80 AVVNFTSTPETAAELDRVLNLNESVMRTKIIRPEDQKIS 118
>gi|307721626|ref|YP_003892766.1| 30S ribosomal protein S6P [Sulfurimonas autotrophica DSM 16294]
gi|306979719|gb|ADN09754.1| SSU ribosomal protein S6P [Sulfurimonas autotrophica DSM 16294]
Length = 153
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 65/102 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++++I+ +I + +I NGGE+ N +GMR +AY I KN + YY
Sbjct: 1 MRHYENLVIVKPTFTAEEIQASIKAVEEVITSNGGEIAATNAMGMRKLAYPIDKNERGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ + PAAI E++R+ RI+E++LR +T+ DS+ +
Sbjct: 61 YVIYYSVAPAAIAEIERRFRINEDLLRFVTIKYDSNREIKAW 102
>gi|154148390|ref|YP_001405847.1| 30S ribosomal protein S6 [Campylobacter hominis ATCC BAA-381]
gi|166226816|sp|A7I006|RS6_CAMHC RecName: Full=30S ribosomal protein S6
gi|153804399|gb|ABS51406.1| ribosomal protein S6 [Campylobacter hominis ATCC BAA-381]
Length = 145
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+++ + ++K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYEVLFIVKPTLQDDEVKTKVDFVKEVITKNGGEIAAVVEMGTRKLAYKIDKYERGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +P I E+ R +RI+E+++R LT+ ++ ++ H + +R
Sbjct: 61 FVIYFTAPTKLIAELVRNLRINEDIIRFLTIKYENKKEISAWEKLSHGVKLSENMKKNER 120
Query: 121 NVDRK 125
++
Sbjct: 121 KAPKE 125
>gi|229087961|ref|ZP_04220069.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-44]
gi|228695346|gb|EEL48223.1| 30S ribosomal protein S6 [Bacillus cereus Rock3-44]
Length = 96
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MKKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S AI+E R +I+E++LR + + +
Sbjct: 61 MILNVNSNAEAINEFDRLAKINEDILRHIVVKEEE 95
>gi|110638977|ref|YP_679186.1| 30S ribosomal protein S6 [Cytophaga hutchinsonii ATCC 33406]
gi|110281658|gb|ABG59844.1| SSU ribosomal protein S6P [Cytophaga hutchinsonii ATCC 33406]
Length = 121
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE VF+L +S Q+KD +++ ++ +NG ++ G+R +AY I+K +Y
Sbjct: 4 KQYETVFILTPVLSDSQMKDAAQKFKQVLVDNGAKIVNEESWGLRKLAYPIQKKNTGFYH 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ + + I+ ++ + R DE ++R LT +D H + + ++ +
Sbjct: 64 LVEFEAATSVINTLETEYRRDERIMRFLTTALDKHAVAYNIKRKKGE 110
>gi|116626135|ref|YP_828291.1| 30S ribosomal protein S6 [Candidatus Solibacter usitatus
Ellin6076]
gi|122251817|sp|Q01QR4|RS6_SOLUE RecName: Full=30S ribosomal protein S6
gi|116229297|gb|ABJ88006.1| SSU ribosomal protein S6P [Candidatus Solibacter usitatus
Ellin6076]
Length = 153
Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 55/94 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +F+++ D S +++ + ++ + G V +++ G R +AYR+ K R+ YV
Sbjct: 3 RIYEELFIVKPDASDEEVDAFVETLRTQLTAAGATVDKIDKWGKRRLAYRVDKYREGTYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
S P + E++R++R+ + VL+ LT+ +D
Sbjct: 63 LFQFTSEPTGVKELERRLRVSDIVLKFLTVRIDE 96
>gi|120435463|ref|YP_861149.1| 30S ribosomal protein S6 [Gramella forsetii KT0803]
gi|166226968|sp|A0M0D7|RS6_GRAFK RecName: Full=30S ribosomal protein S6
gi|117577613|emb|CAL66082.1| 30S ribosomal protein S6 [Gramella forsetii KT0803]
Length = 112
Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 60/111 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +Y+ + G E+ + G+R +AY I+ + +Y
Sbjct: 1 MNNYETVFILNPVLSDEQIKETVKKYEDFLVSKGAEMVAKEDWGLRKLAYAIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
+P AI ++ + R +E ++R LT+ +D H + ++ +++
Sbjct: 61 HLFEYKAPGDAIEPLELEFRREERMMRYLTVKLDKHAIAWAEKRRKRNKEK 111
>gi|323141487|ref|ZP_08076376.1| ribosomal protein S6 [Phascolarctobacterium sp. YIT 12067]
gi|322414067|gb|EFY04897.1| ribosomal protein S6 [Phascolarctobacterium sp. YIT 12067]
Length = 94
Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + + + +++ LI NGG V + G R +AY I+ + Y
Sbjct: 1 MNAYEVMYIVKP-VEDEACEAVVAKFEKLITANGGNVEKTDRWGKRRLAYEIQDLNEGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + + AA+ E+ R M+I + VLR + +
Sbjct: 60 VLVTFQADAAAVKELDRVMKITDEVLRHMIIRKGE 94
>gi|319950615|ref|ZP_08024522.1| 30S ribosomal protein S6 [Dietzia cinnamea P4]
gi|319435723|gb|EFV90936.1| 30S ribosomal protein S6 [Dietzia cinnamea P4]
Length = 95
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I++ GG V V+ G R AY I K + Y
Sbjct: 1 MRQYEVMVILDPSLDERTVAPSLDTFLNVIRQEGGSVDKVDVWGKRRFAYEINKLNEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + S P A+ E+ R++ ++ENVLR+ L D
Sbjct: 61 AVVQLKSEPDAVKELDRQLGLNENVLRTKVLRADK 95
>gi|312141934|ref|YP_004009270.1| 30S ribosomal protein s6 rpsf [Rhodococcus equi 103S]
gi|325672812|ref|ZP_08152506.1| 30S ribosomal protein S6 [Rhodococcus equi ATCC 33707]
gi|311891273|emb|CBH50594.1| 30S ribosomal protein S6 RpsF [Rhodococcus equi 103S]
gi|325556065|gb|EGD25733.1| 30S ribosomal protein S6 [Rhodococcus equi ATCC 33707]
Length = 95
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 55/92 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++++++GG V V+ G R +A+ I KN + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLDTFLNVVRKDGGNVDKVDVWGKRRLAFEIAKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++I + PA + E+ R++ ++E+VLR+ L
Sbjct: 61 AVVDITAEPATVKELDRQLGLNESVLRTKVLR 92
>gi|194098900|ref|YP_002001965.1| 30S ribosomal protein S6 [Neisseria gonorrhoeae NCCP11945]
gi|193934190|gb|ACF30014.1| ribosomal protein S6 [Neisseria gonorrhoeae NCCP11945]
Length = 102
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R
Sbjct: 1 MVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVGELETAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTI 104
++ VLR LT+ + +
Sbjct: 61 NDAVLRHLTIKTKHAVTEASPML 83
>gi|126697235|ref|YP_001092121.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9301]
gi|126544278|gb|ABO18520.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9301]
Length = 153
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 8 YETMYILRPDIAEDEVTTYIDKYNKLLEEFGGTILDSQMRGKRRLAYQIAKHREGIYVQL 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R +T+ + +P + + + D N +
Sbjct: 68 SHQGDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSSKSSTKADDK------ENPE 121
Query: 124 RKQHVSEEKPL 134
K EE+P+
Sbjct: 122 TKVEPKEEQPV 132
>gi|182437467|ref|YP_001825186.1| 30S ribosomal protein S6 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778122|ref|ZP_08237387.1| 30S ribosomal protein S6 [Streptomyces cf. griseus XylebKG-1]
gi|226695288|sp|B1VPC4|RS6_STRGG RecName: Full=30S ribosomal protein S6
gi|178465983|dbj|BAG20503.1| putative 30S ribosomal protein S6 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658455|gb|EGE43301.1| 30S ribosomal protein S6 [Streptomyces cf. griseus XylebKG-1]
Length = 96
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGDGKVEKVDTWGRRRLAYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|169832353|ref|YP_001718335.1| 30S ribosomal protein S6 [Candidatus Desulforudis audaxviator
MP104C]
gi|226703452|sp|B1I6T1|RS6_DESAP RecName: Full=30S ribosomal protein S6
gi|169639197|gb|ACA60703.1| ribosomal protein S6 [Candidatus Desulforudis audaxviator MP104C]
Length = 94
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ D+ ++ I ++ +I + GE+ +N G R +AY I+ R+ +Y
Sbjct: 1 MRQYEVMYILKPDLEDEESTQLIEKFSKIITDRDGEITELNRWGKRRLAYEIKDYREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V M + AA E+ R RI + +LR + + D
Sbjct: 61 VVMKCRAEHAAAQELDRVFRITDGLLRHMIIRED 94
>gi|297200912|ref|ZP_06918309.1| ribosomal protein S6 [Streptomyces sviceus ATCC 29083]
gi|197716410|gb|EDY60444.1| ribosomal protein S6 [Streptomyces sviceus ATCC 29083]
Length = 96
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|325204322|gb|ADY99775.1| ribosomal protein S6 [Neisseria meningitidis M01-240355]
Length = 102
Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R
Sbjct: 1 MVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTI 104
++ VLR LT+ + +
Sbjct: 61 NDAVLRHLTIKTKHAVTEASPML 83
>gi|284929659|ref|YP_003422181.1| 30S ribosomal protein S6P [cyanobacterium UCYN-A]
gi|284810103|gb|ADB95800.1| SSU ribosomal protein S6P [cyanobacterium UCYN-A]
Length = 141
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++LR D+S +Q + +YQ + +N VN G R +AY I+K YV
Sbjct: 4 HYEMIYILRPDLSEEQANQAVTKYQDFLIKNNAIDIKVNVWGKRRLAYPIQKKLDGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV-----------DSHEQSPTLTIQRHDRDD 111
N + I ++R MR++E+VLR LT+ V D++E +P + + + D+
Sbjct: 64 FNYQADGTQIEPLERIMRLEEDVLRYLTIKVEEDLIEQTSELDNNEINPEIVKKSEELDN 123
Query: 112 RNDRFPRDRNVD 123
N + + V+
Sbjct: 124 NNPKTSEAKTVE 135
>gi|300771166|ref|ZP_07081042.1| 30S ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33861]
gi|300761836|gb|EFK58656.1| 30S ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33861]
Length = 122
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 61/119 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S K+ I ++++++ E G E+ + G++ +AY I+K +Y
Sbjct: 1 MQQYESVIILTPLLSDDVAKEVIAKFKNILTEGGAEIVAEDNWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+P I +++ ++R DE V+R LT+ +D H + + + + + + +
Sbjct: 61 HLTEFKAPGELIKKIEIELRRDERVMRFLTIALDKHAIAYSEKKRSGAFNKKAETKTEE 119
>gi|159040549|ref|YP_001539802.1| 30S ribosomal protein S6 [Salinispora arenicola CNS-205]
gi|189045490|sp|A8LXG3|RS6_SALAI RecName: Full=30S ribosomal protein S6
gi|157919384|gb|ABW00812.1| ribosomal protein S6 [Salinispora arenicola CNS-205]
Length = 96
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 55/94 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDSSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + PAA+ E++R++R++E+VLR+ + +
Sbjct: 61 AVIDLQATPAAVAELERQLRLNESVLRTKVIRPE 94
>gi|146301224|ref|YP_001195815.1| 30S ribosomal protein S6 [Flavobacterium johnsoniae UW101]
gi|189045468|sp|A5FE77|RS6_FLAJO RecName: Full=30S ribosomal protein S6
gi|146155642|gb|ABQ06496.1| 30S ribosomal protein S6 [Flavobacterium johnsoniae UW101]
Length = 113
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ +++ + G E+ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEVQVKETVTKFEEFLTSRGAEMVSKEDWGLKKMAYEIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ + + R DE V+R LT+ +D H + + +R +
Sbjct: 61 HLFEFKVAGEVLIAFETEFRRDERVMRFLTVSLDKH--AISWAERRRAK 107
>gi|290959030|ref|YP_003490212.1| 30S ribosomal protein S6 [Streptomyces scabiei 87.22]
gi|260648556|emb|CBG71667.1| putative 30S ribosomal protein S6 [Streptomyces scabiei 87.22]
Length = 96
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|228994193|ref|ZP_04154093.1| 30S ribosomal protein S6 [Bacillus pseudomycoides DSM 12442]
gi|229000263|ref|ZP_04159832.1| 30S ribosomal protein S6 [Bacillus mycoides Rock3-17]
gi|228759595|gb|EEM08572.1| 30S ribosomal protein S6 [Bacillus mycoides Rock3-17]
gi|228765645|gb|EEM14299.1| 30S ribosomal protein S6 [Bacillus pseudomycoides DSM 12442]
Length = 96
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R ++ + K + ++ ++ NG E+ E G R +AY I R +Y
Sbjct: 1 MKKYEIMYIIRPNMEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N+ S A+ E R +I+E++LR + + +
Sbjct: 61 MILNVNSDAEAVKEFDRLAKINEDILRHIVVKEEE 95
>gi|291007702|ref|ZP_06565675.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
Length = 121
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 54/93 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+ +GG V V+ G R +AY I K + Y
Sbjct: 4 MRHYELMVILDPSLDERTVAPSLENFLNVIRNDGGSVEKVDVWGRRRLAYEIDKQAEGIY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V +++ S PA++ E+ R++ ++E VLR+ L
Sbjct: 64 VVLDLNSEPASVKELDRQLNLNETVLRTKVLRR 96
>gi|294673369|ref|YP_003573985.1| 30S ribosomal protein S6 [Prevotella ruminicola 23]
gi|294472198|gb|ADE81587.1| ribosomal protein S6 [Prevotella ruminicola 23]
Length = 114
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T +++ ++ + G E+ G++ +AY I+K +Y
Sbjct: 1 MNQYETVFILTPVLSDEQMKETAAKFKKVLTDKGAEIINEEAWGLKKMAYAIQKKSTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + P I ++ R DE V+R T+ +D +
Sbjct: 61 CLVEFKAEPEVIKTLETAFRRDEKVIRFQTVKLDKYAVE 99
>gi|302870699|ref|YP_003839336.1| 30S ribosomal protein S6 [Micromonospora aurantiaca ATCC 27029]
gi|315506936|ref|YP_004085823.1| ribosomal protein s6 [Micromonospora sp. L5]
gi|302573558|gb|ADL49760.1| ribosomal protein S6 [Micromonospora aurantiaca ATCC 27029]
gi|315413555|gb|ADU11672.1| ribosomal protein S6 [Micromonospora sp. L5]
Length = 96
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEVMVILDPSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEINKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + P A+ E+ R++R++E+VLR+ + +
Sbjct: 61 AVIDLQATPEAVGELDRQLRLNESVLRTKVIRPE 94
>gi|298372705|ref|ZP_06982695.1| ribosomal protein S6 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275609|gb|EFI17160.1| ribosomal protein S6 [Bacteroidetes oral taxon 274 str. F0058]
Length = 135
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE F+L +S Q+K+ + +++ ++ + G + G+R +AY I K +YV
Sbjct: 3 NHYEAAFILTPVLSDVQMKEAVEKFKVVLTDAGATIENEELWGLRKLAYTIDKKSTGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDRDDRNDRFPRD 119
+ + P + ++ + R DE V+R L +D +E + + ++ D + ++
Sbjct: 63 ILQFSGEPTLVETLETQFRRDERVIRFLVFRLDKYAYEYASKRIKKNAEQADIKAKANKE 122
Query: 120 RNVDRKQHVSEEK 132
VD + EE+
Sbjct: 123 AFVDVETENLEEE 135
>gi|145597065|ref|YP_001161362.1| 30S ribosomal protein S6 [Salinispora tropica CNB-440]
gi|189045493|sp|A4XDG8|RS6_SALTO RecName: Full=30S ribosomal protein S6
gi|145306402|gb|ABP56984.1| SSU ribosomal protein S6P [Salinispora tropica CNB-440]
Length = 96
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Y ++I+ GG V + G R +AY I K + Y
Sbjct: 1 MRHYEIMVILDSSLEERTVAPSLDTYLNVIRTAGGSVEKTDVWGRRRLAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + PAA+ E+ R++R++E+VLR+ + +
Sbjct: 61 AVIDLQATPAAVAELDRQLRLNESVLRTKVIRPE 94
>gi|88803225|ref|ZP_01118751.1| 30S ribosomal protein S6 [Polaribacter irgensii 23-P]
gi|88780791|gb|EAR11970.1| 30S ribosomal protein S6 [Polaribacter irgensii 23-P]
Length = 113
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ ++ + G E+ + G++ +AY I+K + +Y
Sbjct: 1 MNHYETVFILNPVLSDTQIKETVQKFNDYLVSRGAEMISKEDWGLKKLAYPIQKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ I + + R D++V+R L++ +D H +
Sbjct: 61 HLLEYKVAGEEISAFELEFRRDDSVMRYLSIRLDKHAAA 99
>gi|29830832|ref|NP_825466.1| 30S ribosomal protein S6 [Streptomyces avermitilis MA-4680]
gi|61216299|sp|Q82FG4|RS6_STRAW RecName: Full=30S ribosomal protein S6
gi|29607945|dbj|BAC72001.1| putative ribosomal protein S6 [Streptomyces avermitilis MA-4680]
gi|320009724|gb|ADW04574.1| ribosomal protein S6 [Streptomyces flavogriseus ATCC 33331]
Length = 96
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|313894832|ref|ZP_07828392.1| ribosomal protein S6 [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976513|gb|EFR41968.1| ribosomal protein S6 [Selenomonas sp. oral taxon 137 str. F0430]
Length = 102
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ + + I ++ LIQ NGG + + G + +AY I + + YY
Sbjct: 1 MRMYEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEINDHSEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + + + PA + E R M+I +++L+ + + +
Sbjct: 60 VLLYVNAEPACVAECDRVMKITDDLLKHMIVRAE 93
>gi|326799757|ref|YP_004317576.1| 30S ribosomal protein S6 [Sphingobacterium sp. 21]
gi|326550521|gb|ADZ78906.1| 30S ribosomal protein S6 [Sphingobacterium sp. 21]
Length = 122
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 60/119 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S + K+ I ++++++ ENG E+ + G++ +AY I K +Y
Sbjct: 1 MQQYETVVILTPLLSEEVAKEVIAKFKNILTENGAEIIHEDNWGLKKLAYPIEKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+P I +++ + + DE V+R LT+ +D H + + + + + +
Sbjct: 61 HLTEFKAPGELISKLELEYKRDERVMRFLTISLDKHAIAYNEKKRSGAFNKKPETKTEE 119
>gi|197119137|ref|YP_002139564.1| 30S ribosomal protein S6 [Geobacter bemidjiensis Bem]
gi|226703471|sp|B5EHW9|RS6_GEOBB RecName: Full=30S ribosomal protein S6
gi|197088497|gb|ACH39768.1| ribosomal protein S6 [Geobacter bemidjiensis Bem]
Length = 134
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q +I G+ + V + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVIASMNGDFKRVEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ I E++R++R+D+ V+R ++ +++ +P
Sbjct: 63 YLRFDGDSGLIAELERRLRLDDKVIRYQSVKLETEVVAPAAA 104
>gi|300742673|ref|ZP_07072694.1| ribosomal protein S6 [Rothia dentocariosa M567]
gi|300381858|gb|EFJ78420.1| ribosomal protein S6 [Rothia dentocariosa M567]
Length = 100
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG + ++ G R +AY I+K + Y
Sbjct: 1 MRAYELMVILNPEVEDRAVEPSLSKFLEIVTNAGGTIDNLDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + P E+ R + ++E+V+R+ + +
Sbjct: 61 AVVNFTASPETAAELDRVLNLNESVMRTKIIRPE 94
>gi|91214892|ref|ZP_01251865.1| 30S ribosomal protein S6 [Psychroflexus torquis ATCC 700755]
gi|91187319|gb|EAS73689.1| 30S ribosomal protein S6 [Psychroflexus torquis ATCC 700755]
Length = 112
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEDQIKETVKKYEDFLVSEGAKMVNKEDWGLKKLAYPIQHKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
I ++ R DE ++R LT+ +D H
Sbjct: 61 HMFEYEVVGPTIEPLEVMFRRDERMMRYLTVKLDKH 96
>gi|134103771|ref|YP_001109432.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
gi|166227379|sp|A4FR32|RS6_SACEN RecName: Full=30S ribosomal protein S6
gi|133916394|emb|CAM06507.1| 30S ribosomal protein S6 [Saccharopolyspora erythraea NRRL 2338]
Length = 118
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 54/93 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRHYELMVILDPSLDERTVAPSLENFLNVIRNDGGSVEKVDVWGRRRLAYEIDKQAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V +++ S PA++ E+ R++ ++E VLR+ L
Sbjct: 61 VVLDLNSEPASVKELDRQLNLNETVLRTKVLRR 93
>gi|301062690|ref|ZP_07203308.1| ribosomal protein S6 [delta proteobacterium NaphS2]
gi|300443213|gb|EFK07360.1| ribosomal protein S6 [delta proteobacterium NaphS2]
Length = 137
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 56/93 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ +++ + + + ++ ++++NGG V V+E G +T+AY I+K K +Y
Sbjct: 1 MRYYETLYIINPNLADEDYRAVVAKFTDVVEKNGGVVTKVDEWGKKTLAYDIKKFDKGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + E+KR++ +D+ VL+ T+ +
Sbjct: 61 VLLQFCGEAGLTAELKRELGLDDRVLKYQTIKL 93
>gi|237757032|ref|ZP_04585484.1| ribosomal protein S6 [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690812|gb|EEP59968.1| ribosomal protein S6 [Sulfurihydrogenibium yellowstonense SS-5]
Length = 104
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S ++IK + + LIQ+N GE+ G R +AY I K YY
Sbjct: 1 MRHYELVFVLKPTLSEEEIKTRVQAIRDLIQQNQGEIYNEENWGRRNLAYPINKFNSGYY 60
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N ++ +RI+E+V+R L + +
Sbjct: 61 FLINYKTGNSNLPAILEYNLRINEDVIRFLNMKLK 95
>gi|15617155|ref|NP_240368.1| 30S ribosomal protein S6 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681906|ref|YP_002468292.1| 30S ribosomal protein S6 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682461|ref|YP_002468845.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471612|ref|ZP_05635611.1| 30S ribosomal protein S6 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387064|sp|P57627|RS6_BUCAI RecName: Full=30S ribosomal protein S6
gi|254765225|sp|B8D8C8|RS6_BUCA5 RecName: Full=30S ribosomal protein S6
gi|254765226|sp|B8D885|RS6_BUCAT RecName: Full=30S ribosomal protein S6
gi|25294551|pir||F84995 30S ribosomal protein S6 [imported] - Buchnera sp. (strain APS)
gi|10039220|dbj|BAB13254.1| 30S ribosomal protein S6 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622194|gb|ACL30350.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624749|gb|ACL30904.1| 30S ribosomal protein S6 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086284|gb|ADP66366.1| 30S ribosomal protein S6 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086860|gb|ADP66941.1| 30S ribosomal protein S6 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087448|gb|ADP67528.1| 30S ribosomal protein S6 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087936|gb|ADP68015.1| 30S ribosomal protein S6 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 113
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D S +I I +Y+ +I +N G + + + G R ++Y I K +KA+Y
Sbjct: 1 MRHYEIIFMVHPD-QSDKIPLLIEKYKKIINDNNGIIHRLEDWGRRQLSYSINKLQKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ MNI P I ++ R + +LR++ + V +
Sbjct: 60 ILMNIEVFPKTITLLETDFRFNNIILRNMIMSVKKAIVELSPI 102
>gi|298208562|ref|YP_003716741.1| 30S ribosomal protein S6 [Croceibacter atlanticus HTCC2559]
gi|83848485|gb|EAP86354.1| 30S ribosomal protein S6 [Croceibacter atlanticus HTCC2559]
Length = 112
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 54/111 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +QIK+T+ +++ + ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSDEQIKETVKKFEDFLISKDAKMVNKEDWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
I ++ R DE ++R LT+ +D H T + +++
Sbjct: 61 HLFEYQVAGEHIEPLEVLFRRDERIMRFLTVKLDKHAVEWAKTRVKRNKEK 111
>gi|296274357|ref|YP_003656988.1| 30S ribosomal protein S6 [Arcobacter nitrofigilis DSM 7299]
gi|296098531|gb|ADG94481.1| ribosomal protein S6 [Arcobacter nitrofigilis DSM 7299]
Length = 120
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 63/107 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F+++ ++ ++ I ++ I++NGGE+ +++G R +AY I K+++ +Y
Sbjct: 5 KHYETMFIVKPTMTEEETVAQIELVKANIEKNGGEIVSFDDMGTRQLAYEIEKHKRGHYY 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
M +P +I E++R RI+EN++R + + +S ++ T +
Sbjct: 65 VMYFRAPTTSILELERNYRINENIIRFIFIKYESKKEVTAWTKLSDE 111
>gi|33862262|ref|NP_893823.1| 30S ribosomal protein S6 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|61216282|sp|Q7UZG1|RS6_PROMP RecName: Full=30S ribosomal protein S6
gi|33634480|emb|CAE20165.1| 30S ribosomal protein S6 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 154
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E+GG++ G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEDEVTNHIDKYNKLLEESGGKILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND--------- 114
+ I ++++ MR+ E+V+R LT+ + +P + + +++ ++ D
Sbjct: 67 SHQGDGQHIFKIEKAMRLSEDVIRYLTVKQEGPLPTPRSSNKGYNQSEKKDIESIDSTNK 126
Query: 115 RFPRDRNVDRKQHVSE 130
++ D+K SE
Sbjct: 127 SEFKEEANDKKTATSE 142
>gi|138897056|ref|YP_001127509.1| 30S ribosomal protein S6 [Geobacillus thermodenitrificans NG80-2]
gi|134268569|gb|ABO68764.1| Ribosomal protein S6 (BS9) [Geobacillus thermodenitrificans
NG80-2]
Length = 98
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 55/94 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R ++ + + + ++ ++++E G E+ V + G R +AY I K R YY+
Sbjct: 5 RKYEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEKYRDGYYM 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + P A+ E R RI E+++R + + +
Sbjct: 65 ILNVMAEPQAVQEFDRLARISEDIIRHIVVKEEK 98
>gi|305667288|ref|YP_003863575.1| 30S ribosomal protein S6 [Maribacter sp. HTCC2170]
gi|88709335|gb|EAR01568.1| 30S ribosomal protein S6 [Maribacter sp. HTCC2170]
Length = 112
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QI++T+ +++ + +NG ++ G++ +AY I+ + +Y
Sbjct: 1 MNNYETVFILNPVLSDVQIEETVKKFEDFLIKNGAKMVAKENWGLKKLAYAIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
P I +++ R DE V+R LT+ +D H
Sbjct: 61 HLFEFTGPGEIITPYEQEFRRDERVMRFLTVKLDKHAIE 99
>gi|310644857|ref|YP_003949616.1| 30S ribosomal protein s6 [Paenibacillus polymyxa SC2]
gi|309249808|gb|ADO59375.1| 30S ribosomal protein S6 [Paenibacillus polymyxa SC2]
Length = 94
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ T+ ++Q +I GGE+ + R +AY I+K R +
Sbjct: 1 MRKYEVMYIIRPDIEQEAVQATVDKFQGIISNGGGEITNHDV-TKRRLAYEIKKFRDGSF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +N + PA + E++R M+I + V+R L
Sbjct: 60 VLVNFTAEPAVVTELERIMKISDEVIRYLI 89
>gi|159026117|emb|CAO88785.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 129
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR D+ + ++ + +Y++LI E+ V G + +AY I+K YV
Sbjct: 3 NNYETLYILRPDLGEEVVQQQVERYRTLITEHSATDIEVKVWGKKRLAYPIKKLNDGVYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
MN + + M+R MR+ + V+R LTL +D P
Sbjct: 63 QMNYQASGKQVAPMERAMRLSDEVIRYLTLKLDRVMPPPA 102
>gi|312200939|ref|YP_004021000.1| ribosomal protein S6 [Frankia sp. EuI1c]
gi|311232275|gb|ADP85130.1| ribosomal protein S6 [Frankia sp. EuI1c]
Length = 113
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 57/97 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L D+ + + ++ Q+ S+++ GG V V+ G R +AY IRK+ + Y
Sbjct: 7 RHYELMVILDPDLEERTVSPSLDQFLSVVRNGGGAVEKVDVWGRRRLAYEIRKSHEGIYA 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+++ + P + E+ R++ ++E+V+R+ + + ++
Sbjct: 67 VIDLHAEPDVVAELDRQLTLNESVIRTKVIRLPEAKK 103
>gi|84497233|ref|ZP_00996055.1| 30S ribosomal protein S6 [Janibacter sp. HTCC2649]
gi|84382121|gb|EAP98003.1| 30S ribosomal protein S6 [Janibacter sp. HTCC2649]
Length = 95
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 55/92 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++I ++GG V V+ G R +AY I+K + Y
Sbjct: 1 MRQYELMVILDPELDDRTVQPSLDKFLTVITKDGGTVDNVDIWGRRRLAYEIKKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ S PA E+ R++ ++E+++R+ L
Sbjct: 61 AIVDFTSEPATAKELDRQLGLNESIMRTKLLR 92
>gi|195536239|ref|ZP_03079246.1| ribosomal protein S6 [Francisella tularensis subsp. novicida FTE]
gi|208779342|ref|ZP_03246688.1| ribosomal protein S6 [Francisella novicida FTG]
gi|194372716|gb|EDX27427.1| ribosomal protein S6 [Francisella tularensis subsp. novicida FTE]
gi|208745142|gb|EDZ91440.1| ribosomal protein S6 [Francisella novicida FTG]
Length = 103
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
++ D S Q+ +G+Y+ +I+E GG++ + G R +AY I K KA+YV NI P
Sbjct: 1 MIHPD-QSDQLDAMLGKYRGIIEEKGGKIHRFEDWGRRQLAYPIEKLHKAHYVLFNIECP 59
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
++ +++ +R ++ +LR L + P++ ++ ++++
Sbjct: 60 TESLEKLQESLRYNDAILRRLVIATKEAITEPSVMMESNEKE 101
>gi|15616612|ref|NP_244918.1| 30S ribosomal protein S6 [Bacillus halodurans C-125]
gi|11134348|sp|Q9K5N8|RS6_BACHD RecName: Full=30S ribosomal protein S6
gi|10176675|dbj|BAB07769.1| 30S ribosomal protein S6 [Bacillus halodurans C-125]
Length = 95
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I ++ ++ G E+ V E+G R +AY I K R+ YY
Sbjct: 1 MRKYEIMYIIAPNLEEAANKEIIERFNGVLTNQGAEIEKVEEMGKRRLAYEINKFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N+ + AI E R ++I++NV+R L +
Sbjct: 61 VLLNVKADADAIAEFNRLIKINDNVIRVLITKDEE 95
>gi|282863345|ref|ZP_06272404.1| ribosomal protein S6 [Streptomyces sp. ACTE]
gi|282561680|gb|EFB67223.1| ribosomal protein S6 [Streptomyces sp. ACTE]
Length = 96
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGNGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L + H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPEVH 96
>gi|154498401|ref|ZP_02036779.1| hypothetical protein BACCAP_02390 [Bacteroides capillosus ATCC
29799]
gi|150272469|gb|EDM99654.1| hypothetical protein BACCAP_02390 [Bacteroides capillosus ATCC
29799]
Length = 98
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V++L D+ + + ++++L++ N G + V+E G R +AY I YYV
Sbjct: 6 ANYEAVYILDADLGEEATAALVAKFKTLVESN-GTLTEVDEWGKRRLAYPINDKNDGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
M S P+ E+ R RI + V+RSL + D
Sbjct: 65 LMTFTSAPSFPLELDRIFRITDGVVRSLIVCKDE 98
>gi|33519563|ref|NP_878395.1| 30S ribosomal protein S6 [Candidatus Blochmannia floridanus]
gi|61215720|sp|Q7VQN9|RS6_BLOFL RecName: Full=30S ribosomal protein S6
gi|33517226|emb|CAD83608.1| 30S ribosomal subunit protein S6 [Candidatus Blochmannia
floridanus]
Length = 120
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S QI + + Y +I + G++ + G R +AY I+ KAYY
Sbjct: 1 MRYYEIVLIIHPD-SDNQIDNLVNYYSEIIINSTGKIHRLENWGRRQLAYAIKNLNKAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
+ +NI + + R +E +LR L + + P+ +++ D +++
Sbjct: 60 LLLNIEISKNILDILDNDFRFNEIILRYLIMRTKNIIVDPSAMVKKKDDNNQE 112
>gi|23100934|ref|NP_694401.1| 30S ribosomal protein S6 [Oceanobacillus iheyensis HTE831]
gi|32171554|sp|Q8EKV4|RS6_OCEIH RecName: Full=30S ribosomal protein S6
gi|22779169|dbj|BAC15435.1| 30S ribosomal protein S6 [Oceanobacillus iheyensis HTE831]
Length = 95
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 52/92 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + I ++ +++ +NG E+ V+E G R +AY I R YY
Sbjct: 1 MRKYEIMYIIRPDIEEEAQTALIERFNTILTDNGAEIDKVDEKGKRRLAYEINDYRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +N AI+E R + +++++R + +
Sbjct: 61 VIINFRGSEEAINEFDRLAKFNDDIIRHMAIK 92
>gi|254448153|ref|ZP_05061616.1| ribosomal protein S6 [gamma proteobacterium HTCC5015]
gi|198262279|gb|EDY86561.1| ribosomal protein S6 [gamma proteobacterium HTCC5015]
Length = 94
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y+++I E GG + + G R +AY I K KA+YV MN+ + + E+ R
Sbjct: 1 MIERYRAII-EQGGNIHRQEDWGRRQLAYPINKIHKAHYVLMNVECEQSVLDELTSTFRF 59
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
++ ++R++ + +D P+ + D+DD D
Sbjct: 60 NDAIIRNMVVQLDEAVTEPSPLAKSSDKDDSAD 92
>gi|54027546|ref|YP_121788.1| 30S ribosomal protein S6 [Nocardia farcinica IFM 10152]
gi|61215419|sp|Q5YN17|RS6_NOCFA RecName: Full=30S ribosomal protein S6
gi|54019054|dbj|BAD60424.1| putative ribosomal protein S6 [Nocardia farcinica IFM 10152]
Length = 95
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ +++ GG++ V+ G R +AY IRK + Y
Sbjct: 1 MRHYEVMVILDPSLDERTVGPSLENMLGVVKTEGGKIDKVDIWGRRRLAYEIRKQAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + PA ++E+ R++ ++E+VLR+ L D
Sbjct: 61 AVIDLTASPATVNELDRQLGLNESVLRTKVLRHDK 95
>gi|269129132|ref|YP_003302502.1| 30S ribosomal protein S6 [Thermomonospora curvata DSM 43183]
gi|268314090|gb|ACZ00465.1| ribosomal protein S6 [Thermomonospora curvata DSM 43183]
Length = 96
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + ++ Q+ S+++ GG V V+ G R +AY I+K + Y
Sbjct: 1 MRRYEVMVILDPSIEERAVAPSLDQFLSVVKNGGGTVEKVDIWGRRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ + E+VLR+ + + H
Sbjct: 61 AVVDLTAEPAVVKELDRQLNLSESVLRTKVIRPEVH 96
>gi|227540352|ref|ZP_03970401.1| ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33300]
gi|227239676|gb|EEI89691.1| ribosomal protein S6 [Sphingobacterium spiritivorum ATCC 33300]
Length = 122
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 61/119 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L +S K+ I ++++++ E G E+ + G++ +AY I+K +Y
Sbjct: 1 MQQYESVIILTPLLSDDVAKEVIAKFKNILTEGGAEIVAEDNWGLKKLAYPIQKKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+P I +++ ++R DE V+R LT+ +D H + + + + + + +
Sbjct: 61 HLTEFKAPGELIRKIEIELRRDERVMRFLTIALDKHAIAYSEKKRSGAFNKKAETKTEE 119
>gi|325130388|gb|EGC53153.1| ribosomal protein S6 [Neisseria meningitidis OX99.30304]
Length = 102
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R
Sbjct: 1 MVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTI 104
++ VLR LT+ + +
Sbjct: 61 NDAVLRHLTIKTKHAVTEASPML 83
>gi|163788026|ref|ZP_02182472.1| 30S ribosomal protein S6 [Flavobacteriales bacterium ALC-1]
gi|159876346|gb|EDP70404.1| 30S ribosomal protein S6 [Flavobacteriales bacterium ALC-1]
Length = 116
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSEDQIKETVKKYEDFLVSKGAKMIAKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
AI ++ + R DE +R LT+ +D H
Sbjct: 61 HLFEYTVAGEAIEPLEVEFRRDERFMRYLTVKLDKH 96
>gi|148243619|ref|YP_001228776.1| 30S ribosomal protein S6 [Synechococcus sp. RCC307]
gi|166227398|sp|A5GX14|RS6_SYNR3 RecName: Full=30S ribosomal protein S6
gi|147851929|emb|CAK29423.1| 30S ribosomal protein S6 [Synechococcus sp. RCC307]
Length = 135
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI+ ++++ +Y+ L+ E GGEV G R +AY I K+R+ Y+
Sbjct: 5 PNYETMYILRPDIAEEEVESHANKYRDLVVEAGGEVIDSQMRGKRRLAYNIGKHREGIYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+N + + +++ MR+ E+V+R LT+ + +L + PR
Sbjct: 65 QLNYSGDGKQVGPLEKAMRLSEDVIRYLTVKYEGQHS--SLGRSTAPANPMASNTPRTEG 122
Query: 122 VDRKQHVSEEKPL 134
++ + + P
Sbjct: 123 QEQAKTEPQTAPA 135
>gi|326329085|ref|ZP_08195414.1| ribosomal protein S6 [Nocardioidaceae bacterium Broad-1]
gi|325953167|gb|EGD45178.1| ribosomal protein S6 [Nocardioidaceae bacterium Broad-1]
Length = 95
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + T+ ++ ++ +GG V V+ G R +AY + KN + Y
Sbjct: 1 MRAYEVMVILEPSLDERTVAPTLDKFLKVVTNDGGTVENVDVWGRRRLAYEVNKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N+ + P + E+ R++ ++E +LR+ +
Sbjct: 61 AVVNLTAEPKTVLELDRQLGLNEQILRTKVIR 92
>gi|117929340|ref|YP_873891.1| SSU ribosomal protein S6P [Acidothermus cellulolyticus 11B]
gi|166226791|sp|A0LWU5|RS6_ACIC1 RecName: Full=30S ribosomal protein S6
gi|117649803|gb|ABK53905.1| SSU ribosomal protein S6P [Acidothermus cellulolyticus 11B]
Length = 96
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 60/95 (63%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL D+ + ++ ++ Q+ ++++++GG V+ ++ G R +AY IRK + Y
Sbjct: 1 MRHYELMVLLDPDVEERSVEPSLDQFLNVVRQDGGTVQKIDVWGRRRLAYEIRKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + P + E+ R++ ++ENVLR+ + D+
Sbjct: 61 AVIDLIANPQTVKELDRQLNLNENVLRTKLVRPDA 95
>gi|325198474|gb|ADY93930.1| ribosomal protein S6 [Neisseria meningitidis G2136]
gi|325200052|gb|ADY95507.1| ribosomal protein S6 [Neisseria meningitidis H44/76]
Length = 102
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ +Y+++I E G++ + + G R +AY I K KA+YV MNI + P + E++ R
Sbjct: 1 MVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTI 104
++ VLR LT+ + +
Sbjct: 61 NDAVLRHLTIKTKHAVTEASPML 83
>gi|222823952|ref|YP_002575526.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
gi|254765227|sp|B9KCI6|RS6_CAMLR RecName: Full=30S ribosomal protein S6
gi|222539174|gb|ACM64275.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
Length = 124
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MRHYEVLFILKPTLTEEEVSAKLEFVKEVLTKNGAEIESVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL-TIQRHDRDDRNDRFPRD 119
+ +P I E++R +RI E V+R L + ++ ++ + + + ++ + +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAWEKLSKGIKQNKKEIKASE 120
>gi|315222301|ref|ZP_07864207.1| ribosomal protein S6 [Streptococcus anginosus F0211]
gi|315188634|gb|EFU22343.1| ribosomal protein S6 [Streptococcus anginosus F0211]
Length = 141
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 46 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 105
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 106 HIVNVEAEDAVALNEFDRLSKINADILRHMIVKLDA 141
>gi|57239414|ref|YP_180550.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58579386|ref|YP_197598.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58617441|ref|YP_196640.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Gardel]
gi|75356738|sp|Q5FG27|RS6_EHRRG RecName: Full=30S ribosomal protein S6
gi|81352829|sp|Q5HAJ4|RS6_EHRRW RecName: Full=30S ribosomal protein S6
gi|57161493|emb|CAH58419.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
gi|58417053|emb|CAI28166.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Gardel]
gi|58418012|emb|CAI27216.1| 30S ribosomal protein S6 [Ehrlichia ruminantium str. Welgevonden]
Length = 109
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYE F+ +Q ++ +++ + SL+ +NG E+ G+ AY I K K +Y
Sbjct: 1 MPLYEFTFIAQQGLTQYELEGLVKGLSSLLTKNGAELLKYEYWGLLDFAYAIDKMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
M I S ++ E KRK+R++E+VLR L L D + +L +Q
Sbjct: 61 CMMYIRSSSTSMDEFKRKVRLNEDVLRFLCLKRDKLPEGDSLMVQASQ 108
>gi|119492201|ref|ZP_01623611.1| Ribosomal protein S6 [Lyngbya sp. PCC 8106]
gi|119453258|gb|EAW34424.1| Ribosomal protein S6 [Lyngbya sp. PCC 8106]
Length = 119
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ +Q+ I +YQ L+QE GG+ + LG R +AY I +R+ YV M
Sbjct: 6 YETMYILRPDLIDEQVDVAIAKYQDLLQEQGGQNIQIQNLGKRRLAYEIDNHREGVYVLM 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
N P I M+R MRI ++V+R LT
Sbjct: 66 NYDGPGHQIAVMERAMRISDDVIRYLTTKQ 95
>gi|229542335|ref|ZP_04431395.1| ribosomal protein S6 [Bacillus coagulans 36D1]
gi|229326755|gb|EEN92430.1| ribosomal protein S6 [Bacillus coagulans 36D1]
Length = 95
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ +++ G E+ E G R +AY I+ R YY
Sbjct: 1 MRKYEIMYIIRPNIEDEAKKALVERFDNVLNNQGAEIIESKEWGKRRLAYEIQDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + P A+ E R +I+ +++R + + +
Sbjct: 61 HIINVNAEPVAVQEFDRLAKINGDIIRHIVVREEE 95
>gi|332520812|ref|ZP_08397272.1| ribosomal protein S6 [Lacinutrix algicola 5H-3-7-4]
gi|332043342|gb|EGI79538.1| ribosomal protein S6 [Lacinutrix algicola 5H-3-7-4]
Length = 112
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S QIK+T+ +Y+ + E G ++ + G++ +AY I+ + +Y
Sbjct: 1 MNHYETVFILNPVLSETQIKETVKKYEDFLTERGAKMVAKEDWGLKKLAYPIQNKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I ++ + R DE +R LT+ +D H S
Sbjct: 61 HLFEYTIDGEHITPLEVEFRRDERFMRYLTVALDKHAIS 99
>gi|220907101|ref|YP_002482412.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 7425]
gi|254765234|sp|B8HR63|RS6_CYAP4 RecName: Full=30S ribosomal protein S6
gi|219863712|gb|ACL44051.1| ribosomal protein S6 [Cyanothece sp. PCC 7425]
Length = 106
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++++R D+ + + I QYQSL+++ G E G R +AY IRK R+ YV
Sbjct: 4 LYETMYIIRPDLGEETVDQVINQYQSLLRDQGAEDVQTQHRGKRRLAYEIRKFREGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
MN + + ++R MR+ + V+R LT+ D +
Sbjct: 64 MNYKAAGPLVANLQRAMRLSDEVIRYLTICQDEPDT 99
>gi|56751494|ref|YP_172195.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 6301]
gi|61216125|sp|Q5N1Z5|RS6_SYNP6 RecName: Full=30S ribosomal protein S6
gi|56686453|dbj|BAD79675.1| 30S ribosomal protein S6 [Synechococcus elongatus PCC 6301]
Length = 107
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++LR D++ +Q++ I +YQ+ + E G EV+ G R +AY I K R+ YV +
Sbjct: 6 YETTYILRADLTEEQVEQAIAKYQTPLTEAGAEVQDTQHRGKRRLAYLINKQREGIYVQI 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
N + I ++R +R+ E VLR LT+ + +P
Sbjct: 66 NYTGDGSQIAPLERALRLSEEVLRFLTVKQEVRPPAPVA 104
>gi|149182310|ref|ZP_01860789.1| ribosomal protein S6 (BS9) [Bacillus sp. SG-1]
gi|148850002|gb|EDL64173.1| ribosomal protein S6 (BS9) [Bacillus sp. SG-1]
Length = 95
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ +++ NG E+ E G R +AY I R YY
Sbjct: 1 MRKYEVMYIIRPNVDDETKKAVVDRFDNVLTSNGAEIVESKEWGKRRLAYEINDFRDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I S A+ E R +I ++++R + + +
Sbjct: 61 QLVKIQSNNEAVSEFDRLAKISDDIIRHIVIKEEE 95
>gi|50955942|ref|YP_063230.1| 30S ribosomal protein S6 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|61215510|sp|Q6ABW7|RS6_LEIXX RecName: Full=30S ribosomal protein S6
gi|50952424|gb|AAT90125.1| 30S ribosomal protein S6 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 128
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 52/106 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L +I + + ++ ++ ++++ +GG + V+ G R +AY I K + Y
Sbjct: 1 MHQYELMVILDPEIDERTVAPSLDKFLNVVRNDGGTIDNVDIWGRRRLAYEINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + + E+ R++++ E V+R+ L D +R
Sbjct: 61 AVVQLTATGDTTKELDRQLKLSEAVMRTKVLRADEAIAQVAAAQKR 106
>gi|319957605|ref|YP_004168868.1| SSU ribosomal protein s6p [Nitratifractor salsuginis DSM 16511]
gi|319420009|gb|ADV47119.1| SSU ribosomal protein S6P [Nitratifractor salsuginis DSM 16511]
Length = 154
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ +++++I+ I + + +I ENGGE++ +E+GMR +AY I K + YY
Sbjct: 1 MNCYETLFVVKPTLTAEEIEGQIARVKEIIAENGGELKATDEMGMRRLAYPIEKQERGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ +P + E++R++R +E +LR +T+ + ++ + + + ++ +
Sbjct: 61 TVVYYTAPSEMVIELERQLRYNEEILRFMTVKYTNKKEL-AVFEKMVEAANKKPAPEKSE 119
Query: 121 NVDRKQHVSEEKPL 134
++ + E P
Sbjct: 120 APVAEEAPAVEAPA 133
>gi|325955200|ref|YP_004238860.1| 30S ribosomal protein S6 [Weeksella virosa DSM 16922]
gi|323437818|gb|ADX68282.1| 30S ribosomal protein S6 [Weeksella virosa DSM 16922]
Length = 114
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+++ + ++ I N E+ G++ +AY I+ R +Y
Sbjct: 1 MTHYETVFILTPVLSDSQVEEAVKKFHDYITANEAEIVATENWGLKKLAYPIQNKRNGFY 60
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + +++ + DE V+R L++ +D H
Sbjct: 61 HLIEFKTDNTDLVSQLELVFKRDERVIRYLSVKLDKH 97
>gi|124026894|ref|YP_001016009.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL1A]
gi|166227363|sp|A2C5I5|RS6_PROM1 RecName: Full=30S ribosomal protein S6
gi|123961962|gb|ABM76745.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL1A]
Length = 138
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI +++ + +Y ++++++ EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVDSHLKKYSAILEKSETEVLDSQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
++ + ++R MR+ E+V+R +T+ D +P T + D ++ + P +
Sbjct: 65 QLSHKGNGQQVATLERAMRLSEDVIRYITVKQDGPLPTPKPT-SKEDETEKEEVKPTEDK 123
Query: 122 VDRKQHVSEEK 132
+ +++
Sbjct: 124 TESPAQEEKKE 134
>gi|295837783|ref|ZP_06824716.1| ribosomal protein S6 [Streptomyces sp. SPB74]
gi|302520487|ref|ZP_07272829.1| ribosomal protein S6 [Streptomyces sp. SPB78]
gi|318058996|ref|ZP_07977719.1| 30S ribosomal protein S6 [Streptomyces sp. SA3_actG]
gi|318075522|ref|ZP_07982854.1| 30S ribosomal protein S6 [Streptomyces sp. SA3_actF]
gi|333025746|ref|ZP_08453810.1| putative 30S ribosomal protein S6 [Streptomyces sp. Tu6071]
gi|197698941|gb|EDY45874.1| ribosomal protein S6 [Streptomyces sp. SPB74]
gi|302429382|gb|EFL01198.1| ribosomal protein S6 [Streptomyces sp. SPB78]
gi|332745598|gb|EGJ76039.1| putative 30S ribosomal protein S6 [Streptomyces sp. Tu6071]
Length = 96
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVAPLIESFLSVVREADGKVEKVDTWGRRRLSYEINKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA I E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVIKELDRQMNLNESVLRTKVLRPETH 96
>gi|322420135|ref|YP_004199358.1| 30S ribosomal protein S6 [Geobacter sp. M18]
gi|320126522|gb|ADW14082.1| ribosomal protein S6 [Geobacter sp. M18]
Length = 133
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 59/109 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q +I G+ + + + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVIASMNGDFKRLEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
++ + I E++R++R+D+ V+R ++ ++ +P + +
Sbjct: 63 YLRFDADAPLIAELERRLRLDDKVIRYQSVKLEQEVVAPAAAPVKSAEE 111
>gi|86151148|ref|ZP_01069364.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152790|ref|ZP_01070995.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612432|ref|YP_001000748.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
81-176]
gi|153951510|ref|YP_001397814.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415331|ref|YP_001482587.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81116]
gi|167005668|ref|ZP_02271426.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|283956467|ref|ZP_06373947.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315124555|ref|YP_004066559.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|166226817|sp|A7H2T4|RS6_CAMJD RecName: Full=30S ribosomal protein S6
gi|166226818|sp|A1W057|RS6_CAMJJ RecName: Full=30S ribosomal protein S6
gi|189045458|sp|A8FMC3|RS6_CAMJ8 RecName: Full=30S ribosomal protein S6
gi|85842318|gb|EAQ59564.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843675|gb|EAQ60885.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249295|gb|EAQ72256.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|152938956|gb|ABS43697.1| ribosomal protein S6 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386295|gb|ABV52610.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81116]
gi|283792187|gb|EFC30976.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315018277|gb|ADT66370.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315932205|gb|EFV11148.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 327]
Length = 125
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ +P I E++R +RI E V+R L + ++ ++
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW 102
>gi|157414312|ref|YP_001485178.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9215]
gi|157388887|gb|ABV51592.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9215]
Length = 157
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV +
Sbjct: 12 YETMYILRPDIAEDEVTNHIDKYNKLLEEFGGSILDSQMRGKRRLAYQIAKHREGIYVQL 71
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R +T+ + +P + + + D +N +
Sbjct: 72 SHQGDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSTKSSTQADDK------KNQE 125
Query: 124 RKQHVSEEKPL 134
K E+P+
Sbjct: 126 TKVESKGEQPV 136
>gi|119718881|ref|YP_925846.1| SSU ribosomal protein S6P [Nocardioides sp. JS614]
gi|166227356|sp|A1SQS4|RS6_NOCSJ RecName: Full=30S ribosomal protein S6
gi|119539542|gb|ABL84159.1| SSU ribosomal protein S6P [Nocardioides sp. JS614]
Length = 96
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +Y ++I+++GG V V+ G R +AY ++KN + Y
Sbjct: 1 MRAYEVMVILDPSLEERTVEPSLDKYLNVIRKDGGTVESVDVWGRRRLAYEVKKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + PA + E R++ ++E+++R+ + D+H
Sbjct: 61 AVIKLNAEPATVKEFDRQLTLNESIIRTKVMRPDAH 96
>gi|229917470|ref|YP_002886116.1| 30S ribosomal protein S6 [Exiguobacterium sp. AT1b]
gi|259495334|sp|C4L008|RS6_EXISA RecName: Full=30S ribosomal protein S6
gi|229468899|gb|ACQ70671.1| ribosomal protein S6 [Exiguobacterium sp. AT1b]
Length = 95
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + + K I ++ ++I ENGG V ++G R AY I K R+ +Y
Sbjct: 1 MRKYELLYIIRPSVDEEAKKALIERFNNVITENGGTVEKTTDMGKRRFAYEINKMREGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +NI + P AI E +R M+I ++V+R +T
Sbjct: 61 VLLNIVAEPKAILETERLMKISDDVVRQMTTK 92
>gi|238020008|ref|ZP_04600434.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269797400|ref|YP_003311300.1| ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282849202|ref|ZP_06258587.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294793014|ref|ZP_06758160.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|294794946|ref|ZP_06760081.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|313893842|ref|ZP_07827408.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
gi|237863532|gb|EEP64822.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269094029|gb|ACZ24020.1| ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282580906|gb|EFB86304.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294454308|gb|EFG22682.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|294455959|gb|EFG24323.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|313441406|gb|EFR59832.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
Length = 94
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ + I + ++LI GG V V+ G R +AY ++K +Y
Sbjct: 1 MNKYEVMFIVKP-AEEEATNAVIEKVEALIARVGGTVEKVDRWGKRRLAYAVKKFTDGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + PA I E+ R ++I++ VLR L + ++
Sbjct: 60 VLINFEAAPAEIKEIDRVLKINDEVLRHLIVKHEA 94
>gi|320528727|ref|ZP_08029879.1| ribosomal protein S6 [Solobacterium moorei F0204]
gi|320130937|gb|EFW23515.1| ribosomal protein S6 [Solobacterium moorei F0204]
Length = 137
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + +++ + I +I +NGG++ +E GMR AY I +K YY
Sbjct: 37 MKKYEVMYIINESVETEKRAELIETLSKIITDNGGKIAKTDEWGMREFAYHIDDMKKGYY 96
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + A + E R M I+ NV+R + ++ +
Sbjct: 97 VVTAFEADNACVKEFDRLMGINANVVRFMITRDEAPAKG 135
>gi|223982849|ref|ZP_03633070.1| hypothetical protein HOLDEFILI_00344 [Holdemania filiformis DSM
12042]
gi|223965171|gb|EEF69462.1| hypothetical protein HOLDEFILI_00344 [Holdemania filiformis DSM
12042]
Length = 96
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + I ++I +NGG++ V++ G++ AYRI K YY
Sbjct: 1 MKKYEVMYIVNASLDDAARQQVIDGLHAIITDNGGKILKVDDWGVKEFAYRIEDMTKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + A + E R RI+ N++R + + D
Sbjct: 61 MVVTFEADNATVKEFDRLSRINANIVRYMIIKQDE 95
>gi|158520027|ref|YP_001527897.1| ribosomal protein S6 [Desulfococcus oleovorans Hxd3]
gi|226703453|sp|A8ZRQ3|RS6_DESOH RecName: Full=30S ribosomal protein S6
gi|158508853|gb|ABW65820.1| ribosomal protein S6 [Desulfococcus oleovorans Hxd3]
Length = 168
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ D+S + + +LI N G + +E G R +AY IRK + +Y
Sbjct: 1 MRRYETIFIADPDLSPENQAQLFEKATTLIDANSGVLVEFDEWGTRRLAYEIRKKPRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPTLTIQRHDRDDRND 114
V ++ A + ++ RIDE VL+ +T+ + ++ + +++ + +
Sbjct: 61 VRLDFCGDGATVQGLENAFRIDERVLKFMTVFLSENADPEALRQAIAEEKEKKAE 115
>gi|307329991|ref|ZP_07609143.1| ribosomal protein S6 [Streptomyces violaceusniger Tu 4113]
gi|306884367|gb|EFN15401.1| ribosomal protein S6 [Streptomyces violaceusniger Tu 4113]
Length = 96
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERAVSPLIENFLSVVREGEGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQLNLNESVLRTKVLRPETH 96
>gi|255326496|ref|ZP_05367578.1| ribosomal protein S6 [Rothia mucilaginosa ATCC 25296]
gi|255296536|gb|EET75871.1| ribosomal protein S6 [Rothia mucilaginosa ATCC 25296]
Length = 101
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 53/99 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ ++ ++ GG V V+ G R +AY I+K + Y
Sbjct: 1 MRAYELMVILSPEVEDRAVEPSLSKFLEIVTNEGGSVDNVDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+N S P E+ R + ++E+V+R+ + + + S
Sbjct: 61 AVVNFTSTPETAAELDRVLNLNESVMRTKIIRPEDQKIS 99
>gi|308071627|ref|YP_003873232.1| 30S ribosomal protein S6 [Paenibacillus polymyxa E681]
gi|305860906|gb|ADM72694.1| 30S ribosomal protein S6 [Paenibacillus polymyxa E681]
Length = 94
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R DI + ++ T+ ++Q +I GGE+ + R +AY I+K R +
Sbjct: 1 MRKYEAMYIIRPDIEQEAVQATVDKFQGIISNGGGEITSHDV-TKRRLAYEIKKFRDGSF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V +N + PA + E++R M+I + V+R L
Sbjct: 60 VLVNFTAEPAVVTELERIMKISDEVIRYLI 89
>gi|239980814|ref|ZP_04703338.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
gi|291452673|ref|ZP_06592063.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
gi|291355622|gb|EFE82524.1| 30S ribosomal protein S6 [Streptomyces albus J1074]
Length = 96
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + I + S+++E G+V V+ G R ++Y I+K + Y
Sbjct: 1 MRHYEVMVILDPDLEERSVAPLIENFLSVVREADGKVEKVDTWGRRRLSYEIKKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E+VLR+ L ++H
Sbjct: 61 SVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH 96
>gi|157736502|ref|YP_001489185.1| 30S ribosomal protein S6 [Arcobacter butzleri RM4018]
gi|157698356|gb|ABV66516.1| 30S ribosomal protein S6 [Arcobacter butzleri RM4018]
Length = 118
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 64/114 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F+L+ ++ ++ I ++LI++NGGE+ + +G+R +AY I K ++ YY
Sbjct: 5 KHYETMFILKPTLTEEETVAQIDGIKALIEKNGGEISSTDNVGIRELAYEIEKCKRGYYY 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
+ P+ I E++R R +EN++R + + D+ ++ + T + + +
Sbjct: 65 VIYFKGNPSGIAEIERNYRNNENLIRFIFIKYDTKKEIASWTKMSDEAAKKATK 118
>gi|139439451|ref|ZP_01772892.1| Hypothetical protein COLAER_01912 [Collinsella aerofaciens ATCC
25986]
gi|133775230|gb|EBA39050.1| Hypothetical protein COLAER_01912 [Collinsella aerofaciens ATCC
25986]
Length = 97
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + + I E G+V V+E G R +AY I Y
Sbjct: 1 MKAYELLFFVDPSLDPETRLAVMKRIDTTIAEGAGKVDSVDEWGKRKLAYEINDLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P I E+ R +RI + V+R + + D E
Sbjct: 61 TLINFHADPTQIAELDRVLRITDAVVRHMIVRRDDQE 97
>gi|296271510|ref|YP_003654142.1| 30S ribosomal protein S6 [Thermobispora bispora DSM 43833]
gi|296094297|gb|ADG90249.1| ribosomal protein S6 [Thermobispora bispora DSM 43833]
Length = 96
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ Q+ S+++ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRRYEMMVILDPSLDERTVEPSLDQFLSIVRNDGGTVEKVDVWGRRKLAYDIAKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ P + E+ R++ ++ENVLR+ + D H
Sbjct: 61 AVIDLTCKPETVRELDRQLNLNENVLRTKVIRPDLH 96
>gi|255324072|ref|ZP_05365197.1| ribosomal protein S6 [Corynebacterium tuberculostearicum SK141]
gi|255298929|gb|EET78221.1| ribosomal protein S6 [Corynebacterium tuberculostearicum SK141]
Length = 96
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ ++ ++++ GG+V ++ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPNQDERTVTPSLDKFLEIVRQEGGKVENLDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 61 AVVNLECEHTSVAELDRRLNLNDTILRTKVLRTDS 95
>gi|297569120|ref|YP_003690464.1| ribosomal protein S6 [Desulfurivibrio alkaliphilus AHT2]
gi|296925035|gb|ADH85845.1| ribosomal protein S6 [Desulfurivibrio alkaliphilus AHT2]
Length = 134
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 1 MKLYEHVFLLRQDI-SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M+ YE V ++R S ++ I +Y +I + GE+ V+ G++ +AY I K +
Sbjct: 1 MRNYESVIIVRPSAGSEAELTGVIDKYSGVITAHEGEIGGVDRWGLKKLAYPISKETQGV 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
Y+ + P I E++R +RID+ +L+ LT+ + E T + D
Sbjct: 61 YLLFRYTTSPDGIKELERLLRIDDRILKFLTVKLTGEEAPFTPSEDEGGNGDEEAAGDEA 120
Query: 120 RNVDRKQHVSEE 131
D + E+
Sbjct: 121 EGNDNNEDNGED 132
>gi|327200752|pdb|3R3T|A Chain A, Crystal Structure Of 30s Ribosomal Protein S From
Bacillus Anthracis
gi|327200753|pdb|3R3T|B Chain B, Crystal Structure Of 30s Ribosomal Protein S From
Bacillus Anthracis
Length = 99
Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 50/94 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 5 RKYEIXYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYX 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AI+E R +I+E++LR + + +
Sbjct: 65 ILNVNANAEAINEFDRLAKINEDILRHIVVKEEE 98
>gi|297563759|ref|YP_003682733.1| ribosomal protein S6 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848207|gb|ADH70227.1| ribosomal protein S6 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 96
Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ + +++ +GG V V+ G R +AY I KN + Y
Sbjct: 1 MRRYELMIILDPNLDERTVAPSLENFLGVVRNDGGSVEKVDIWGKRRLAYDIDKNAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ I E VLR+ L + H
Sbjct: 61 AVIDLTAEPATVKELDRQLGIAEAVLRTKVLRPEVH 96
>gi|220933168|ref|YP_002510076.1| ribosomal protein S6 [Halothermothrix orenii H 168]
gi|219994478|gb|ACL71081.1| ribosomal protein S6 [Halothermothrix orenii H 168]
Length = 95
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F+++ D+ + + + + + +I NGG+V V+E G R +AY I+ YY
Sbjct: 1 MRAYETTFIIKPDLEEEARNNILDRVKEIIDTNGGKVNEVDEWGDRNLAYEIKNYNTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I EM+R + ++VLR L + D
Sbjct: 61 TLIKFEGEAETIDEMERYFNLTDSVLRYLVIREDK 95
>gi|116628446|ref|YP_821065.1| 30S ribosomal protein S6 [Streptococcus thermophilus LMD-9]
gi|122266959|sp|Q03IV3|RS6_STRTD RecName: Full=30S ribosomal protein S6
gi|116101723|gb|ABJ66869.1| SSU ribosomal protein S6P [Streptococcus thermophilus LMD-9]
gi|312279066|gb|ADQ63723.1| 30S ribosomal protein S6 [Streptococcus thermophilus ND03]
Length = 96
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGIY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|303232315|ref|ZP_07319010.1| ribosomal protein S6 [Atopobium vaginae PB189-T1-4]
gi|302481572|gb|EFL44637.1| ribosomal protein S6 [Atopobium vaginae PB189-T1-4]
Length = 97
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + + + + I E G V V + G R +AY I K + Y
Sbjct: 1 MKAYELLYFVSPSATDEVRAAVAKRIDDTITEQSGVVDSVEDWGKRKLAYEINKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+N + PA I E+ R +RI++ V+R + +
Sbjct: 61 TLINFHADPAHIAELDRVLRINDTVVRHMIVRR 93
>gi|116074259|ref|ZP_01471521.1| ribosomal protein S6 [Synechococcus sp. RS9916]
gi|116069564|gb|EAU75316.1| ribosomal protein S6 [Synechococcus sp. RS9916]
Length = 123
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I KN++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDILVEAGAEVLDNQMRGKRRLAYAINKNKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ + +++ MR+ E+V+ LT+ D P +
Sbjct: 65 QLSHNGDGQQVAVLEKAMRLSEDVIHYLTVKQDGPLPEPRVM 106
>gi|104773264|ref|YP_618244.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|300812006|ref|ZP_07092462.1| ribosomal protein S6 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313122782|ref|YP_004033041.1| 30S ribosomal protein s6 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|103422345|emb|CAI96853.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|300497032|gb|EFK32098.1| ribosomal protein S6 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279345|gb|ADQ60064.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325124862|gb|ADY84192.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325685100|gb|EGD27231.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 97
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ + K I +Y +I +NGGE+ + G R AY I K R+ Y
Sbjct: 4 KYEITYIIKPDVDDEAKKAIIDKYTKVIADNGGEMVEAKDWGKRRFAYEIEKYREGSYYI 63
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + AA++E R +ID++VLRS+T+ +D
Sbjct: 64 MTFTAEDAAAVNEFARLSKIDDSVLRSMTVKLDK 97
>gi|113953188|ref|YP_732113.1| 30S ribosomal protein S6 [Synechococcus sp. CC9311]
gi|123327505|sp|Q0I609|RS6_SYNS3 RecName: Full=30S ribosomal protein S6
gi|113880539|gb|ABI45497.1| ribosomal protein S6 [Synechococcus sp. CC9311]
Length = 121
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 56/102 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHVTKYRDILTEAGAEVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVGVIEKAMRLSEDVIRYLTVKQEGPLPAPRVA 106
>gi|284047423|ref|YP_003397762.1| ribosomal protein S6 [Acidaminococcus fermentans DSM 20731]
gi|283951644|gb|ADB46447.1| ribosomal protein S6 [Acidaminococcus fermentans DSM 20731]
Length = 94
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + ++ L+ NG + ++ G + +AY I+ Y
Sbjct: 1 MNNYEVMYIVKP-VEEDAFNAVVKKFDDLLVANGATIEKTDKWGKKRLAYAIQDFNDGLY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V A+ PAA+ E+ R M+I +++LR + +
Sbjct: 60 VLTTFAAEPAAVKELDRVMKITDDILRHMIIRKGE 94
>gi|284993411|ref|YP_003411966.1| 30S ribosomal protein S6 [Geodermatophilus obscurus DSM 43160]
gi|284066657|gb|ADB77595.1| ribosomal protein S6 [Geodermatophilus obscurus DSM 43160]
Length = 95
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + I ++ ++ +++ +GG V G R +AY I K + Y
Sbjct: 1 MRRYELMVILDPDLEERTIAPSLDRFLTVVTNSGGTV-KTEIWGRRRLAYEINKQVEGIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++I + PAA+ E+ R++ ++E+VLR+ + + H
Sbjct: 60 AIVDIQATPAAVAELDRQLNLNESVLRTKLMRPEVH 95
>gi|253700101|ref|YP_003021290.1| 30S ribosomal protein S6 [Geobacter sp. M21]
gi|259495335|sp|C6E503|RS6_GEOSM RecName: Full=30S ribosomal protein S6
gi|251774951|gb|ACT17532.1| ribosomal protein S6 [Geobacter sp. M21]
Length = 134
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 57/102 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE +++++ D+ ++IK + Q ++ G+ + + + G R +AY I KN + Y
Sbjct: 3 RMYETIYIVQPDLGDEEIKALSTKVQDVVAGMNGDFKRLEDWGTRKLAYPINKNPRGRYF 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ I E++R++R+D+ V+R ++ +++ +P
Sbjct: 63 YLRFDGDSGLIAELERRLRLDDKVIRYQSVKLETEVVAPAAA 104
>gi|72383153|ref|YP_292508.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. NATL2A]
gi|91207930|sp|Q46I73|RS6_PROMT RecName: Full=30S ribosomal protein S6
gi|72003003|gb|AAZ58805.1| SSU ribosomal protein S6P [Prochlorococcus marinus str. NATL2A]
Length = 138
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI +++ + +Y +++++ EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVDSHLKKYSEILEKSETEVLDSQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
++ + ++R MR+ E+V+R +T+ D +P T + + ++ + P +
Sbjct: 65 QLSHKGNGQQVATLERAMRLSEDVIRYITVKQDGPLPTPKPT-SKENEPEKEEVKPTEEK 123
Query: 122 VDRKQHVSEEK 132
+ +++
Sbjct: 124 TESPSKDEKKE 134
>gi|85859720|ref|YP_461922.1| 30S ribosomal protein S6P [Syntrophus aciditrophicus SB]
gi|85722811|gb|ABC77754.1| SSU ribosomal protein S6P [Syntrophus aciditrophicus SB]
Length = 173
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V + + ++ + I +Y S+I + G V ++ G+R +AY IRK + YV
Sbjct: 22 RRYETVVIAQANLPEDDMTGLIERYNSIIADRKGTVVKIDRWGVRKLAYDIRKQTRGAYV 81
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT-----IQRHDRDDR 112
+ A + E++R ++ID+NVL+ +T+L D + + + + + +++
Sbjct: 82 IYDFAGTSDVVAELERNLKIDDNVLKYMTVLTDPETTAENIMKEITALAKKETEEK 137
>gi|291285955|ref|YP_003502771.1| 30S ribosomal protein S6 [Denitrovibrio acetiphilus DSM 12809]
gi|290883115|gb|ADD66815.1| ribosomal protein S6 [Denitrovibrio acetiphilus DSM 12809]
Length = 180
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF++R D+ +++ + Y+ I+++GG++ V G +T+AY I R+ Y
Sbjct: 1 MNTYETVFIVRPDLPQEELDKELEFYKGNIEQHGGKILKVEPWGKQTMAYDIENFREGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH--EQSPTLTIQRHDRDDRNDRFPR 118
+ + E+ + R +EN+LR + + +D + +P R + PR
Sbjct: 61 FLIQFEASTEYHDELNLRFRYNENILRFVVVAIDEKKFKLNPKRDTSGPKRYGKKPSGPR 120
Query: 119 DRNVDRKQ-HVSEEK 132
D +Q +EEK
Sbjct: 121 KPREDAEQSETTEEK 135
>gi|72163494|ref|YP_291151.1| 30S ribosomal protein S6 [Thermobifida fusca YX]
gi|91207797|sp|Q47K94|RS6_THEFY RecName: Full=30S ribosomal protein S6
gi|71917226|gb|AAZ57128.1| SSU ribosomal protein S6P [Thermobifida fusca YX]
Length = 96
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Q+ S+++ GG V V+ G R +AY I KN + Y
Sbjct: 1 MRRYEVMIILDPTLDERTVAPSLEQFLSVVRNEGGSVEKVDVWGKRRLAYDIGKNSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + P+ +HE+ R++ + E VLR+ L + H
Sbjct: 61 AVIDLTAKPSTVHELDRQLNLTEAVLRTKVLRPEIH 96
>gi|299135704|ref|ZP_07028888.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX8]
gi|298601828|gb|EFI57982.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX8]
Length = 157
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D+ ++ + + + GG V+ ++G R +AY ++K +YV
Sbjct: 3 RTYEIMFIVRPDVEEAELDKLVETFSGYVTTGGGVVKTTEKMGRRRLAYTVQKFNDGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + +P + I E++R++R+ E V++ +T+ +D E+ + + RD R +
Sbjct: 63 LLIVDAPASLISEIERRLRVSEPVIKFITVRMD--EEDKRVAKIKAHRDSHVKRSALPTS 120
Query: 122 VDRKQHVSE 130
V+E
Sbjct: 121 SPEAAQVAE 129
>gi|315638123|ref|ZP_07893306.1| 30S ribosomal protein S6 [Campylobacter upsaliensis JV21]
gi|315481803|gb|EFU72424.1| 30S ribosomal protein S6 [Campylobacter upsaliensis JV21]
Length = 125
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E++ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVSAKLEFVKEILSKNGAEIQTVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-SHEQSPTLTIQRHDRDDRNDRFPRD 119
+ +P + I E++R +RI E V+R L + + E S + + + + + P +
Sbjct: 61 FVIYFKAPTSLIAELERVLRITEEVIRFLIVKYENKKEISAWEKLSQGIKQSKKEIKPIE 120
>gi|172059040|ref|YP_001815500.1| 30S ribosomal protein S6 [Exiguobacterium sibiricum 255-15]
gi|226703468|sp|B1YG99|RS6_EXIS2 RecName: Full=30S ribosomal protein S6
gi|171991561|gb|ACB62483.1| ribosomal protein S6 [Exiguobacterium sibiricum 255-15]
Length = 95
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K + ++ ++ +NGG V E+G R AY I R+ +Y
Sbjct: 1 MRKYEVLYIIRPEVDEEARKALVERFNKVLTDNGGTVEKTTEMGKRRFAYEINDMREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N+ + PAA E+ R M+I ++++R + +
Sbjct: 61 VLLNVTAEPAATKELDRLMKISDDIVRLMITKDEK 95
>gi|50843665|ref|YP_056892.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202]
gi|282854510|ref|ZP_06263846.1| ribosomal protein S6 [Propionibacterium acnes J139]
gi|289425921|ref|ZP_06427673.1| ribosomal protein S6 [Propionibacterium acnes SK187]
gi|289428181|ref|ZP_06429880.1| ribosomal protein S6 [Propionibacterium acnes J165]
gi|295131753|ref|YP_003582416.1| ribosomal protein S6 [Propionibacterium acnes SK137]
gi|61216184|sp|Q6A5M9|RS6_PROAC RecName: Full=30S ribosomal protein S6
gi|50841267|gb|AAT83934.1| 30S ribosomal protein S6 [Propionibacterium acnes KPA171202]
gi|282582371|gb|EFB87752.1| ribosomal protein S6 [Propionibacterium acnes J139]
gi|289153697|gb|EFD02406.1| ribosomal protein S6 [Propionibacterium acnes SK187]
gi|289158661|gb|EFD06865.1| ribosomal protein S6 [Propionibacterium acnes J165]
gi|291375975|gb|ADD99829.1| ribosomal protein S6 [Propionibacterium acnes SK137]
gi|313765163|gb|EFS36527.1| ribosomal protein S6 [Propionibacterium acnes HL013PA1]
gi|313771569|gb|EFS37535.1| ribosomal protein S6 [Propionibacterium acnes HL074PA1]
gi|313794141|gb|EFS42161.1| ribosomal protein S6 [Propionibacterium acnes HL110PA1]
gi|313803264|gb|EFS44460.1| ribosomal protein S6 [Propionibacterium acnes HL110PA2]
gi|313808597|gb|EFS47057.1| ribosomal protein S6 [Propionibacterium acnes HL087PA2]
gi|313811967|gb|EFS49681.1| ribosomal protein S6 [Propionibacterium acnes HL083PA1]
gi|313813949|gb|EFS51663.1| ribosomal protein S6 [Propionibacterium acnes HL025PA1]
gi|313817113|gb|EFS54827.1| ribosomal protein S6 [Propionibacterium acnes HL059PA1]
gi|313819058|gb|EFS56772.1| ribosomal protein S6 [Propionibacterium acnes HL046PA2]
gi|313821663|gb|EFS59377.1| ribosomal protein S6 [Propionibacterium acnes HL036PA1]
gi|313823799|gb|EFS61513.1| ribosomal protein S6 [Propionibacterium acnes HL036PA2]
gi|313826903|gb|EFS64617.1| ribosomal protein S6 [Propionibacterium acnes HL063PA1]
gi|313829274|gb|EFS66988.1| ribosomal protein S6 [Propionibacterium acnes HL063PA2]
gi|313832400|gb|EFS70114.1| ribosomal protein S6 [Propionibacterium acnes HL007PA1]
gi|313834167|gb|EFS71881.1| ribosomal protein S6 [Propionibacterium acnes HL056PA1]
gi|313839205|gb|EFS76919.1| ribosomal protein S6 [Propionibacterium acnes HL086PA1]
gi|314916832|gb|EFS80663.1| ribosomal protein S6 [Propionibacterium acnes HL005PA4]
gi|314919009|gb|EFS82840.1| ribosomal protein S6 [Propionibacterium acnes HL050PA1]
gi|314921160|gb|EFS84991.1| ribosomal protein S6 [Propionibacterium acnes HL050PA3]
gi|314921992|gb|EFS85823.1| ribosomal protein S6 [Propionibacterium acnes HL001PA1]
gi|314926139|gb|EFS89970.1| ribosomal protein S6 [Propionibacterium acnes HL036PA3]
gi|314932493|gb|EFS96324.1| ribosomal protein S6 [Propionibacterium acnes HL067PA1]
gi|314956278|gb|EFT00650.1| ribosomal protein S6 [Propionibacterium acnes HL027PA1]
gi|314958672|gb|EFT02774.1| ribosomal protein S6 [Propionibacterium acnes HL002PA1]
gi|314960978|gb|EFT05079.1| ribosomal protein S6 [Propionibacterium acnes HL002PA2]
gi|314964038|gb|EFT08138.1| ribosomal protein S6 [Propionibacterium acnes HL082PA1]
gi|314965949|gb|EFT10048.1| ribosomal protein S6 [Propionibacterium acnes HL082PA2]
gi|314968802|gb|EFT12900.1| ribosomal protein S6 [Propionibacterium acnes HL037PA1]
gi|314975066|gb|EFT19161.1| ribosomal protein S6 [Propionibacterium acnes HL053PA1]
gi|314977477|gb|EFT21572.1| ribosomal protein S6 [Propionibacterium acnes HL045PA1]
gi|314979065|gb|EFT23159.1| ribosomal protein S6 [Propionibacterium acnes HL072PA2]
gi|314980728|gb|EFT24822.1| ribosomal protein S6 [Propionibacterium acnes HL110PA3]
gi|314985855|gb|EFT29947.1| ribosomal protein S6 [Propionibacterium acnes HL005PA1]
gi|314989264|gb|EFT33355.1| ribosomal protein S6 [Propionibacterium acnes HL005PA3]
gi|315078284|gb|EFT50323.1| ribosomal protein S6 [Propionibacterium acnes HL053PA2]
gi|315081410|gb|EFT53386.1| ribosomal protein S6 [Propionibacterium acnes HL078PA1]
gi|315084950|gb|EFT56926.1| ribosomal protein S6 [Propionibacterium acnes HL027PA2]
gi|315087480|gb|EFT59456.1| ribosomal protein S6 [Propionibacterium acnes HL002PA3]
gi|315089612|gb|EFT61588.1| ribosomal protein S6 [Propionibacterium acnes HL072PA1]
gi|315090953|gb|EFT62929.1| ribosomal protein S6 [Propionibacterium acnes HL110PA4]
gi|315095176|gb|EFT67152.1| ribosomal protein S6 [Propionibacterium acnes HL060PA1]
gi|315096893|gb|EFT68869.1| ribosomal protein S6 [Propionibacterium acnes HL038PA1]
gi|315100047|gb|EFT72023.1| ribosomal protein S6 [Propionibacterium acnes HL059PA2]
gi|315102793|gb|EFT74769.1| ribosomal protein S6 [Propionibacterium acnes HL046PA1]
gi|315105295|gb|EFT77271.1| ribosomal protein S6 [Propionibacterium acnes HL050PA2]
gi|315107347|gb|EFT79323.1| ribosomal protein S6 [Propionibacterium acnes HL030PA1]
gi|315110505|gb|EFT82481.1| ribosomal protein S6 [Propionibacterium acnes HL030PA2]
gi|327328805|gb|EGE70565.1| ribosomal protein S6 [Propionibacterium acnes HL103PA1]
gi|327332996|gb|EGE74728.1| ribosomal protein S6 [Propionibacterium acnes HL096PA2]
gi|327333988|gb|EGE75703.1| ribosomal protein S6 [Propionibacterium acnes HL096PA3]
gi|327334407|gb|EGE76118.1| ribosomal protein S6 [Propionibacterium acnes HL097PA1]
gi|327448704|gb|EGE95358.1| ribosomal protein S6 [Propionibacterium acnes HL043PA1]
gi|327449104|gb|EGE95758.1| ribosomal protein S6 [Propionibacterium acnes HL043PA2]
gi|327450361|gb|EGE97015.1| ribosomal protein S6 [Propionibacterium acnes HL013PA2]
gi|327455520|gb|EGF02175.1| ribosomal protein S6 [Propionibacterium acnes HL087PA3]
gi|327456175|gb|EGF02830.1| ribosomal protein S6 [Propionibacterium acnes HL083PA2]
gi|327457574|gb|EGF04229.1| ribosomal protein S6 [Propionibacterium acnes HL092PA1]
gi|328756816|gb|EGF70432.1| ribosomal protein S6 [Propionibacterium acnes HL087PA1]
gi|328757704|gb|EGF71320.1| ribosomal protein S6 [Propionibacterium acnes HL020PA1]
gi|328759099|gb|EGF72715.1| ribosomal protein S6 [Propionibacterium acnes HL025PA2]
gi|328762208|gb|EGF75704.1| ribosomal protein S6 [Propionibacterium acnes HL099PA1]
gi|332676617|gb|AEE73433.1| 30S ribosomal protein S6 [Propionibacterium acnes 266]
Length = 96
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +N PA I E+ R + IDE ++R+ + + H
Sbjct: 61 VVVNATCEPATIQELDRLLAIDEKIMRTKVMRPEIH 96
>gi|256833733|ref|YP_003162460.1| 30S ribosomal protein S6 [Jonesia denitrificans DSM 20603]
gi|256687264|gb|ACV10157.1| ribosomal protein S6 [Jonesia denitrificans DSM 20603]
Length = 95
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L D+ + + TI + +++ GG V ++ G R +AY I K + Y
Sbjct: 1 MRQYELMMILSPDVEERNLNATIEKLLAVVPAEGGSVENIDIWGRRRMAYEIAKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + PA E++R++ ++E++LR L VD+
Sbjct: 61 AVINFTATPATTKELERQLGLNESILRIKVLRVDA 95
>gi|237786618|ref|YP_002907323.1| 30S ribosomal protein S6 [Corynebacterium kroppenstedtii DSM
44385]
gi|259495328|sp|C4LGG1|RS6_CORK4 RecName: Full=30S ribosomal protein S6
gi|237759530|gb|ACR18780.1| 30S ribosomal protein S6 [Corynebacterium kroppenstedtii DSM
44385]
Length = 95
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ +Y ++++ G V V+ G R +AY I+K + Y
Sbjct: 1 MRHYEIMIILDPAQDERTVAPSLDKYLDVVRKEKGNVDKVDIWGKRRLAYPIQKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ A + E+ R + ++++VLR+ L D+
Sbjct: 61 VVVDFTCESATVLEVDRLLNLNDSVLRTKVLRTDA 95
>gi|310659870|ref|YP_003937591.1| 30S ribosomal protein s6 [Clostridium sticklandii DSM 519]
gi|308826648|emb|CBH22686.1| 30S ribosomal protein S6 [Clostridium sticklandii]
Length = 95
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR ++ + + + + +I+ + GEV V+ G R +AY I K + YY
Sbjct: 1 MRNYELIYVLRPNLEEEAKTAVLDKVKGIIESS-GEVVKVDTWGTRKLAYEIEKLTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N S E+ R ++I +N +R + + +D
Sbjct: 60 VLINFKSTTEVPKEIDRNLKIMDNAIRHMIVKLDE 94
>gi|32491011|ref|NP_871265.1| 30S ribosomal protein S6 [Wigglesworthia glossinidia endosymbiont
of Glossina brevipalpis]
gi|31340385|sp|Q8D2U2|RS6_WIGBR RecName: Full=30S ribosomal protein S6
gi|25166217|dbj|BAC24408.1| rpsF [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 113
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ D S QI + I Y +I+ N G + + + G R +AY I+K KA+Y
Sbjct: 1 MRHYEIVLMIHTD-QSDQISNIIEHYTKMIKINKGSIHRLEDWGRRQLAYPIKKLNKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ MNI + ++ + + + ++ ++R++ + V + P+ + + + N+
Sbjct: 60 ILMNIETSTKVLNNIIQDLNLNNFIIRNMIMRVKNAINEPSPMKKTKENKELNN 113
>gi|328906634|gb|EGG26409.1| 30S ribosomal protein S6 [Propionibacterium sp. P08]
Length = 96
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIVDPTVEERQVDSLMEKYLKVITDEKGTVGNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +N PA I EM R + IDE ++R+ + + H
Sbjct: 61 VVVNATCEPATIQEMDRLLAIDEKIMRTKVMRPEIH 96
>gi|302393058|ref|YP_003828878.1| ribosomal protein S6 [Acetohalobium arabaticum DSM 5501]
gi|302205135|gb|ADL13813.1| ribosomal protein S6 [Acetohalobium arabaticum DSM 5501]
Length = 95
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ D+ ++ + + I EN GE+ +++ G + +AY + ++ YY
Sbjct: 1 MRKYETMFIVNPDLEDDATEEIVEKITDTIDENKGEISNIDKWGTKNLAYELDDHKAGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N I E++R R+D+N+LR + L
Sbjct: 61 TVVNFEGESETIDELERAYRLDDNILRFIILR 92
>gi|89897782|ref|YP_521269.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense Y51]
gi|219670931|ref|YP_002461366.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense DCB-2]
gi|122480435|sp|Q24MB7|RS6_DESHY RecName: Full=30S ribosomal protein S6
gi|254765432|sp|B8G0J4|RS6_DESHD RecName: Full=30S ribosomal protein S6
gi|89337230|dbj|BAE86825.1| 30S ribosomal protein S6 [Desulfitobacterium hafniense Y51]
gi|219541191|gb|ACL22930.1| ribosomal protein S6 [Desulfitobacterium hafniense DCB-2]
Length = 95
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R D+ + + T+ + ++ NGG +++ G R +AY + R+ +Y
Sbjct: 1 MKAYEVLYVIRPDLDDEAVAATVDKLSEVVTNNGGADVAIDKWGKRRLAYEVNDYREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ MN E++R M+I + V+R LT +
Sbjct: 61 ILMNFNGEARTAQEVERIMKISDAVVRFLTTKKE 94
>gi|300859451|ref|YP_003784434.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686905|gb|ADK29827.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
FRC41]
gi|302207131|gb|ADL11473.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
C231]
gi|302331692|gb|ADL21886.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis
1002]
gi|308277385|gb|ADO27284.1| 30S ribosomal protein S6 [Corynebacterium pseudotuberculosis I19]
Length = 95
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E+ R + +++ VLR+ L D
Sbjct: 61 AVLNLNCESATVLELDRVLNLNDGVLRTKVLRGDK 95
>gi|17232294|ref|NP_488842.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120]
gi|24212311|sp|Q8YMX2|RS6_ANASP RecName: Full=30S ribosomal protein S6
gi|17133939|dbj|BAB76501.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120]
Length = 108
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ I +YQ+L+QE G V G R +AY I+K R +YV
Sbjct: 5 YETLYILRPDLTDEQVELAIAKYQNLLQEQGATDLEVQNRGKRRLAYEIKKQRDGFYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N +P AI ++R MR+ E V+R LT+ +
Sbjct: 65 NYNAPGKAIAILERAMRLSEEVIRYLTVKQE 95
>gi|57242165|ref|ZP_00370105.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis RM3195]
gi|57017357|gb|EAL54138.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis RM3195]
Length = 125
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E++ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVSAKLEFVKEILSKNGAEIQTVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-SHEQSPTLTIQRHDRDDRNDRFPRD 119
+ +P I E++R +RI E V+R L + + E S + + + + + P +
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEISAWEKLSQGIKQSKKEIKPIE 120
>gi|161611280|ref|YP_140168.2| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311]
gi|161936363|ref|YP_142087.2| 30S ribosomal protein S6 [Streptococcus thermophilus CNRZ1066]
gi|91207795|sp|Q5LY48|RS6_STRT1 RecName: Full=30S ribosomal protein S6
gi|91207796|sp|Q5M2Q3|RS6_STRT2 RecName: Full=30S ribosomal protein S6
Length = 96
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|271970522|ref|YP_003344718.1| 30S ribosomal protein S6 [Streptosporangium roseum DSM 43021]
gi|270513697|gb|ACZ91975.1| 30S ribosomal protein S6 [Streptosporangium roseum DSM 43021]
Length = 96
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ Q+ ++++ +GG V V+ G R ++Y I K + Y
Sbjct: 1 MRRYEMMVILDPSLDERTVAPSLDQFLTVVRNDGGSVEKVDVWGRRRLSYDIDKKPEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R+M ++E +LR+ L D H
Sbjct: 61 AVIDLTAEPATVKELDRQMNLNEGILRTKVLRPDVH 96
>gi|322516031|ref|ZP_08068968.1| 30S ribosomal protein S6 [Streptococcus vestibularis ATCC 49124]
gi|322125446|gb|EFX96792.1| 30S ribosomal protein S6 [Streptococcus vestibularis ATCC 49124]
Length = 125
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 30 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 89
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA++E R +I+ ++LR + + +D+
Sbjct: 90 HVVNVEANDDAALNEFDRLSKINGDILRHMIVKLDA 125
>gi|15675658|ref|NP_269832.1| 30S ribosomal protein S6 [Streptococcus pyogenes M1 GAS]
gi|19746764|ref|NP_607900.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS8232]
gi|21911118|ref|NP_665386.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS315]
gi|28895197|ref|NP_801547.1| 30S ribosomal protein S6 [Streptococcus pyogenes SSI-1]
gi|50914913|ref|YP_060885.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS10394]
gi|71904204|ref|YP_281007.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS6180]
gi|71911368|ref|YP_282918.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS5005]
gi|94989190|ref|YP_597291.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS9429]
gi|94991131|ref|YP_599231.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS10270]
gi|94993077|ref|YP_601176.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS2096]
gi|139473171|ref|YP_001127886.1| 30S ribosomal protein S6 [Streptococcus pyogenes str. Manfredo]
gi|209559925|ref|YP_002286397.1| 30S ribosomal protein S6 [Streptococcus pyogenes NZ131]
gi|251783275|ref|YP_002997580.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306826728|ref|ZP_07460030.1| 30S ribosomal protein S6 [Streptococcus pyogenes ATCC 10782]
gi|54039535|sp|P66600|RS6_STRP3 RecName: Full=30S ribosomal protein S6
gi|54039536|sp|P66601|RS6_STRP8 RecName: Full=30S ribosomal protein S6
gi|54041978|sp|P66599|RS6_STRP1 RecName: Full=30S ribosomal protein S6
gi|61216147|sp|Q5XA61|RS6_STRP6 RecName: Full=30S ribosomal protein S6
gi|91207794|sp|Q48RK8|RS6_STRPM RecName: Full=30S ribosomal protein S6
gi|166227389|sp|Q1JA29|RS6_STRPB RecName: Full=30S ribosomal protein S6
gi|166227390|sp|Q1JK76|RS6_STRPC RecName: Full=30S ribosomal protein S6
gi|166227391|sp|Q1JF72|RS6_STRPD RecName: Full=30S ribosomal protein S6
gi|166227392|sp|A2RCR4|RS6_STRPG RecName: Full=30S ribosomal protein S6
gi|226695292|sp|B5XI40|RS6_STRPZ RecName: Full=30S ribosomal protein S6
gi|13622870|gb|AAK34553.1| 30S ribosomal protein S6 [Streptococcus pyogenes M1 GAS]
gi|19748995|gb|AAL98399.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS8232]
gi|21905328|gb|AAM80189.1| 30S ribosomal protein S6 [Streptococcus pyogenes MGAS315]
gi|28810443|dbj|BAC63380.1| 30S ribosomal protein S6 [Streptococcus pyogenes SSI-1]
gi|50903987|gb|AAT87702.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10394]
gi|71803299|gb|AAX72652.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS6180]
gi|71854150|gb|AAZ52173.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS5005]
gi|94542698|gb|ABF32747.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS9429]
gi|94544639|gb|ABF34687.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10270]
gi|94546585|gb|ABF36632.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS2096]
gi|134271417|emb|CAM29637.1| 30S ribosomal protein S6 [Streptococcus pyogenes str. Manfredo]
gi|209541126|gb|ACI61702.1| SSU ribosomal protein S6p [Streptococcus pyogenes NZ131]
gi|242391907|dbj|BAH82366.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304431017|gb|EFM34024.1| 30S ribosomal protein S6 [Streptococcus pyogenes ATCC 10782]
gi|322412658|gb|EFY03566.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323127999|gb|ADX25296.1| 30S ribosomal protein S6 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 96
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAAALNEFDRLSKINGDILRHMIVKLDA 96
>gi|148240853|ref|YP_001226240.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7803]
gi|166227397|sp|A5GPS8|RS6_SYNPW RecName: Full=30S ribosomal protein S6
gi|147849392|emb|CAK24943.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7803]
Length = 123
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 56/101 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G +V G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDILVEAGADVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVAVLEKVMRLSEDVIRYLTVKQEGPLPAPRV 105
>gi|268316169|ref|YP_003289888.1| 30S ribosomal protein S6 [Rhodothermus marinus DSM 4252]
gi|262333703|gb|ACY47500.1| ribosomal protein S6 [Rhodothermus marinus DSM 4252]
Length = 144
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++ +S QIK+ I + I+E+GGE+ ++E G R +AY I+K R YYV
Sbjct: 6 NFYELTYIINAALSDDQIKEVIRRVNQYIEEHGGEIVEIDEWGTRRLAYPIQKRRNGYYV 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
M +P + I ++R + IDE VLR LTL +D+ ++ ++R +
Sbjct: 66 NMYFRAPASLIAALERFLEIDEQVLRYLTLRMDAK------MLRHYERRKQQAAEAARPR 119
Query: 122 V 122
Sbjct: 120 P 120
>gi|78214178|ref|YP_382957.1| 30S ribosomal protein S6 [Synechococcus sp. CC9605]
gi|123577268|sp|Q3AG80|RS6_SYNSC RecName: Full=30S ribosomal protein S6
gi|78198637|gb|ABB36402.1| ribosomal protein S6 [Synechococcus sp. CC9605]
Length = 124
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 56/102 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDMLVEAGAEVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQHVAVLEKAMRLSEDVIRYLTVKQEGPLPAPRVM 106
>gi|116513235|ref|YP_812141.1| 30S ribosomal protein S6 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116092550|gb|ABJ57703.1| SSU ribosomal protein S6P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 97
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ + K I +Y +I +NGGE+ + G R AY I K R+ Y
Sbjct: 4 KYEITYIIKPDVDDEAKKAIIDKYTKVIADNGGEMVEAKDWGKRRFAYEIEKYREGSYYI 63
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + AA++E R +ID++VLRS+ + +D
Sbjct: 64 MTFTAEDAAAVNEFARLSKIDDSVLRSMIVKLDK 97
>gi|75908293|ref|YP_322589.1| 30S ribosomal protein S6 [Anabaena variabilis ATCC 29413]
gi|91207901|sp|Q3MBE2|RS6_ANAVT RecName: Full=30S ribosomal protein S6
gi|75702018|gb|ABA21694.1| SSU ribosomal protein S6P [Anabaena variabilis ATCC 29413]
Length = 108
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ I +YQ+L+QE G V G R +AY I+K R +YV
Sbjct: 5 YETLYILRPDLTDEQVELAIAKYQNLLQEQGATDIEVQNRGKRRLAYEIKKQRDGFYVQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N +P AI ++R MR+ E V+R LT+ +
Sbjct: 65 NYNAPGKAIAILERAMRLSEEVIRYLTVKQE 95
>gi|291165939|gb|EFE27986.1| 30S ribosomal protein S6 [Filifactor alocis ATCC 35896]
Length = 95
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ ++ + + + Q++++E E+ V+ G R +AY I+ YY
Sbjct: 1 MRNYELIYILKPNLEEDVKEAVLAKVQAIVEEGKAEIEKVDVWGNRKLAYEIQDFTDGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N + E+ R ++I + V+R + + ++
Sbjct: 61 VLINFKAGVDVPKEIDRNLKISDAVIRHMIVNIE 94
>gi|313674401|ref|YP_004052397.1| SSU ribosomal protein s6p [Marivirga tractuosa DSM 4126]
gi|312941099|gb|ADR20289.1| SSU ribosomal protein S6P [Marivirga tractuosa DSM 4126]
Length = 123
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE VF+L +S Q+KD + +++ ++++ E+ V + G++ +AY I+ +Y
Sbjct: 4 KNYETVFILTPVLSDAQMKDAVDKFRKVLEDKKAEIINVEQWGLKKLAYPIQHKSTGFYN 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + P + ++ + R DE ++R LT+ +D H R P+++
Sbjct: 64 LIEFKATPEVVAALELEYRRDEKIMRFLTVALDKHAIE-----YGERRRKGAFNKPKEQK 118
Query: 122 VD 123
+
Sbjct: 119 EE 120
>gi|213422406|ref|ZP_03355472.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 98
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y + I G++ + + G R +AY I K KA+YV MN+ +P I E++ R
Sbjct: 1 MIERYSAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQ-RHDRDDRNDRF 116
++ V+RS+ + + ++ + +R +R D F
Sbjct: 61 NDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDF 96
>gi|313836464|gb|EFS74178.1| ribosomal protein S6 [Propionibacterium acnes HL037PA2]
gi|314928919|gb|EFS92750.1| ribosomal protein S6 [Propionibacterium acnes HL044PA1]
gi|314971090|gb|EFT15188.1| ribosomal protein S6 [Propionibacterium acnes HL037PA3]
Length = 96
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R +AY I+K + Y
Sbjct: 1 MRKYEVMIIVDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRLAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +N PA I EM R + IDE ++R+ + + H
Sbjct: 61 VVVNATCEPATIQEMDRLLAIDEKIMRTKVMRPEIH 96
>gi|288554589|ref|YP_003426524.1| 30S ribosomal protein S6 [Bacillus pseudofirmus OF4]
gi|288545749|gb|ADC49632.1| 30S ribosomal protein S6 [Bacillus pseudofirmus OF4]
Length = 95
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I ++ ++ NG EV V E+G R +AY I R+ +Y
Sbjct: 1 MRKYEIMYIIAPNLEESANKEIIERFNGVLTSNGAEVEKVEEMGKRRLAYEINDYREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + AI E R ++I++NV+R L +
Sbjct: 61 VLLSVQANSEAIAEFNRLIKINDNVIRVLITKDEE 95
>gi|57167954|ref|ZP_00367093.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|305431896|ref|ZP_07401063.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
gi|57020328|gb|EAL56997.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|304444980|gb|EFM37626.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
Length = 125
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLVKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ +P I E++R +RI E V+R L + ++ ++
Sbjct: 61 FVIYFKAPTNLIAELERILRITEEVIRFLIVKYENKKEIAAW 102
>gi|224368966|ref|YP_002603130.1| 30S ribosomal protein S6 [Desulfobacterium autotrophicum HRM2]
gi|259495330|sp|C0QBV4|RS6_DESAH RecName: Full=30S ribosomal protein S6
gi|223691683|gb|ACN14966.1| RpsF [Desulfobacterium autotrophicum HRM2]
Length = 155
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+ D+ + +++ ++++ GG + ++ G + +AY I K + +Y
Sbjct: 1 MRMYETIFITDPDLQDEVRNTLFDRFKGILEQEGGILANFDDWGNKKLAYEIAKKPRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR-------------- 106
V M + E++R R+D+ +L+ +T+L++ L +Q
Sbjct: 61 VCMTYGGTGTLVTELERNFRLDDKILKYMTILLEKDIDPEALKLQIDAEAAAKSEADAAK 120
Query: 107 --------HDRDDRNDRFPRDRNVDRKQHVSEEK 132
+ + D VD + +EE+
Sbjct: 121 AEADAARVEAEAKKAETDETDETVDAETPENEEE 154
>gi|291520309|emb|CBK75530.1| SSU ribosomal protein S6P [Butyrivibrio fibrisolvens 16/4]
Length = 96
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG++ V++ G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKIEDDARTATVEKAKEYITRFGGQITDVDDWGKKRLAYEIQKMNEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F++ + P +++ +RI +NVLR L + D
Sbjct: 61 YFIHFDAEPGVPAQIEENIRIMDNVLRFLCVRADEA 96
>gi|284036034|ref|YP_003385964.1| ribosomal protein S6 [Spirosoma linguale DSM 74]
gi|283815327|gb|ADB37165.1| ribosomal protein S6 [Spirosoma linguale DSM 74]
Length = 124
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE VF+L +S Q+KD + +++ ++ +NG E+ + +G+R +AY I+ YY
Sbjct: 4 NNYETVFILTPVLSEAQMKDAVDKFRKVLTDNGAELVHEDHMGLRKLAYPIQHKNTGYYQ 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+P I ++ + DE ++R LT+ +D H
Sbjct: 64 LFEFKAPGTIIEKLNTEYLRDERIIRHLTVSLDKH 98
>gi|218282112|ref|ZP_03488411.1| hypothetical protein EUBIFOR_00986 [Eubacterium biforme DSM 3989]
gi|218216905|gb|EEC90443.1| hypothetical protein EUBIFOR_00986 [Eubacterium biforme DSM 3989]
Length = 115
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + K + + I ENGG + V++ G++ AY I +K +Y
Sbjct: 19 MKKYEIMYIVNASLDDAAFKTVSDRLHATITENGGSIDKVDDWGVKEFAYEIDHMKKGHY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V +N+ + A + E +R RI NV+R + + +S +
Sbjct: 79 VVINVTANNAGVFEFQRLSRISNNVIRIMVVKTESEK 115
>gi|88596295|ref|ZP_01099532.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283954633|ref|ZP_06372151.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|88191136|gb|EAQ95108.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283793825|gb|EFC32576.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|315927922|gb|EFV07244.1| Ribosomal protein S6 [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 125
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLIKNGAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ +P I E++R +RI E V+R L + ++ ++
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW 102
>gi|260587269|ref|ZP_05853182.1| ribosomal protein S6 [Blautia hansenii DSM 20583]
gi|260542464|gb|EEX23033.1| ribosomal protein S6 [Blautia hansenii DSM 20583]
Length = 156
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + I G V V E G + +AY I+K R+ YY
Sbjct: 62 MNKYELALVVNAKIDDEARAAVVEKAKDYIARYNGTVTEVEEWGKKRLAYEIQKMREGYY 121
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S A E++ ++RI +NVLR L + ++
Sbjct: 122 YFIQFESDAACPAEVEGRIRIMDNVLRYLVVKKEA 156
>gi|269797043|ref|YP_003316498.1| 30S ribosomal protein S6P [Sanguibacter keddieii DSM 10542]
gi|269099228|gb|ACZ23664.1| SSU ribosomal protein S6P [Sanguibacter keddieii DSM 10542]
Length = 95
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + ++ +Y ++I GG V V+ G R +A+ I+K + Y
Sbjct: 1 MRQYELMIILDPEIEERTVAPSLDKYLTVISTEGGSVDKVDIWGRRRLAFEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + PA E+ R++ ++E VLR+ L D
Sbjct: 61 AVVDFTATPATAKELDRQLGLNEVVLRTKILRAD 94
>gi|33867041|ref|NP_898600.1| 30S ribosomal protein S6 [Synechococcus sp. WH 8102]
gi|61216277|sp|Q7U3C1|RS6_SYNPX RecName: Full=30S ribosomal protein S6
gi|33639642|emb|CAE09026.1| 30S ribosomal protein S6 [Synechococcus sp. WH 8102]
Length = 127
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 56/101 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G +V G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDMLVEAGADVLDNQMRGKRRLAYPIDKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVAVLEKAMRLSEDVIRYLTVKQEGPLPAPRV 105
>gi|227893832|ref|ZP_04011637.1| 30S ribosomal protein S6 [Lactobacillus ultunensis DSM 16047]
gi|227864321|gb|EEJ71742.1| 30S ribosomal protein S6 [Lactobacillus ultunensis DSM 16047]
Length = 98
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEDSKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFSRLSKIDNAILRSMTVKLDK 98
>gi|269958123|ref|YP_003327912.1| 30S ribosomal protein S6 [Xylanimonas cellulosilytica DSM 15894]
gi|269306804|gb|ACZ32354.1| ribosomal protein S6 [Xylanimonas cellulosilytica DSM 15894]
Length = 98
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + + ++ +Y S+I GG V V+ G R +A+ I K + Y
Sbjct: 3 MRQYELMVILDPEVEERTVAPSLEKYLSVISTQGGSVDKVDIWGRRRMAFDINKKSEGIY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + E+ R++ ++E VLR+ L D+
Sbjct: 63 AVVDFTATSDTAKELDRQLGLNEAVLRTKILRTDA 97
>gi|118470162|ref|YP_891097.1| 30S ribosomal protein S6 [Mycobacterium smegmatis str. MC2 155]
gi|302595892|sp|A0R7F9|RS6_MYCS2 RecName: Full=30S ribosomal protein S6
gi|118171449|gb|ABK72345.1| ribosomal protein S6 [Mycobacterium smegmatis str. MC2 155]
Length = 90
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 53/90 (58%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + ++ + ++I+++GG V V+ G R +AY I K+ + Y +++
Sbjct: 1 MVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIYAVIDVK 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ PA + E+ R++ ++E+VLR+ L D H
Sbjct: 61 AEPATVSELDRQLNLNESVLRTKVLRTDKH 90
>gi|58336361|ref|YP_192946.1| 30S ribosomal protein S6 [Lactobacillus acidophilus NCFM]
gi|227902588|ref|ZP_04020393.1| 30S ribosomal protein S6 [Lactobacillus acidophilus ATCC 4796]
gi|75358243|sp|Q5FN09|RS6_LACAC RecName: Full=30S ribosomal protein S6
gi|58253678|gb|AAV41915.1| 30S ribosomal protein S6 [Lactobacillus acidophilus NCFM]
gi|227869677|gb|EEJ77098.1| 30S ribosomal protein S6 [Lactobacillus acidophilus ATCC 4796]
Length = 98
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDIDEDNKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFSRLSKIDNAILRSMTVKLDK 98
>gi|260436555|ref|ZP_05790525.1| ribosomal protein S6 [Synechococcus sp. WH 8109]
gi|260414429|gb|EEX07725.1| ribosomal protein S6 [Synechococcus sp. WH 8109]
Length = 127
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 56/102 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G +V G R +AY I K+++ YV
Sbjct: 8 PYYETMYILRPDIPEEEVESHLNKYRDMLVEAGADVLDNQMRGKRRLAYPIAKHKEGIYV 67
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 68 QLSHNGDGQHVAVLEKAMRLSEDVIRYLTVKQEGPLPAPRVM 109
>gi|158319094|ref|YP_001511601.1| ribosomal protein S6 [Alkaliphilus oremlandii OhILAs]
gi|167011242|sp|A8MED4|RS6_ALKOO RecName: Full=30S ribosomal protein S6
gi|158139293|gb|ABW17605.1| ribosomal protein S6 [Alkaliphilus oremlandii OhILAs]
Length = 94
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V++L+ ++ ++ + +++ +I+ + G + V+E G R +AY I K + YY
Sbjct: 1 MNKYELVYILKSNVEEEKRNQLLDKFRGIIEAD-GTIENVDEWGNRRLAYEINKINEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N ++ E+ R ++I + V+R + + ++
Sbjct: 60 TLVNFSAAADVPKELDRNLKIADEVIRHMIIRLEK 94
>gi|225026120|ref|ZP_03715312.1| hypothetical protein EUBHAL_00361 [Eubacterium hallii DSM 3353]
gi|224956557|gb|EEG37766.1| hypothetical protein EUBHAL_00361 [Eubacterium hallii DSM 3353]
Length = 95
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I D I + ++LI++ GGE+ V+E G + +AY I+K R+ YY
Sbjct: 1 MNKYELALVINAKIEDDARTDAIEKIKALIEKFGGEITNVDEWGKKKLAYEIQKMREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R++RI E V+R L + D+
Sbjct: 61 YFIQFDASAECPAEIERRVRIMEPVMRYLCVKQDA 95
>gi|123967130|ref|YP_001012211.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9515]
gi|166227365|sp|A2BZ93|RS6_PROM5 RecName: Full=30S ribosomal protein S6
gi|123201496|gb|ABM73104.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9515]
Length = 155
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 68/127 (53%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI+ +++K+ I +Y L++E G + G R +AY+I K+R+ YV +
Sbjct: 7 YETMYILRPDIAEEEVKNHIDKYNKLLEEFGATILDSQMRGKRRLAYQIAKHREGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ I ++++ MR+ E+V+R LT+ + +P + + ++ ++ + D
Sbjct: 67 SHQGDGQHIFKIEKAMRLSEDVIRYLTVKQEGPLPTPRSSNKSSNQAEKKENENIDSANK 126
Query: 124 RKQHVSE 130
+ E
Sbjct: 127 SEPKADE 133
>gi|323698323|ref|ZP_08110235.1| ribosomal protein S6 [Desulfovibrio sp. ND132]
gi|323458255|gb|EGB14120.1| ribosomal protein S6 [Desulfovibrio desulfuricans ND132]
Length = 96
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 51/92 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + LL +++++ + ++ GG++ ++ GMR +AY ++K + YYV
Sbjct: 3 NNYETLVLLSPELAAEDRTTILDTLTGIVDREGGKMVETDDWGMRQLAYPVQKQTRGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ +P A + E++R +RI + + + +T+ +
Sbjct: 63 RLVYDAPGALVAELERNIRITDGIFKFMTVKL 94
>gi|317126705|ref|YP_004100817.1| 30S ribosomal protein S6P [Intrasporangium calvum DSM 43043]
gi|315590793|gb|ADU50090.1| SSU ribosomal protein S6P [Intrasporangium calvum DSM 43043]
Length = 95
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 52/92 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + T+ ++ +++++GG V V+ G R +AY I+K + Y
Sbjct: 1 MRQYELMVILDPETEERTVSTTMDKFLGVVKKDGGTVENVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N + PA E+ R++ + E+++R+ L
Sbjct: 61 AVVNFTAEPATAQELDRQLNLSESIMRTKLLR 92
>gi|256843825|ref|ZP_05549312.1| 30S ribosomal protein S6 [Lactobacillus crispatus 125-2-CHN]
gi|293380897|ref|ZP_06626933.1| 30S ribosomal protein S6 [Lactobacillus crispatus 214-1]
gi|312977112|ref|ZP_07788861.1| ribosomal protein S6 [Lactobacillus crispatus CTV-05]
gi|315037237|ref|YP_004030805.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1112]
gi|325955728|ref|YP_004286338.1| 30S ribosomal protein S6 [Lactobacillus acidophilus 30SC]
gi|256613730|gb|EEU18932.1| 30S ribosomal protein S6 [Lactobacillus crispatus 125-2-CHN]
gi|290922570|gb|EFD99536.1| 30S ribosomal protein S6 [Lactobacillus crispatus 214-1]
gi|310896440|gb|EFQ45505.1| ribosomal protein S6 [Lactobacillus crispatus CTV-05]
gi|312275370|gb|ADQ58010.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1112]
gi|325332293|gb|ADZ06201.1| 30S ribosomal protein S6 [Lactobacillus acidophilus 30SC]
gi|327182556|gb|AEA31003.1| 30S ribosomal protein S6 [Lactobacillus amylovorus GRL 1118]
Length = 98
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEDNKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFSRLSKIDNAILRSMTVKLDK 98
>gi|288906101|ref|YP_003431323.1| ribosomal protein S6 [Streptococcus gallolyticus UCN34]
gi|306832140|ref|ZP_07465294.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732827|emb|CBI14403.1| ribosomal protein S6 [Streptococcus gallolyticus UCN34]
gi|304425579|gb|EFM28697.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 96
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVEAEDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|330752553|emb|CBL87500.1| Ribosomal protein S6 [uncultured Flavobacteria bacterium]
Length = 111
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S Q+K+T+ ++ SLI+ ++ G++ + Y I+ R +Y
Sbjct: 1 MNKYETVFILNPVLSESQVKETVEKFSSLIKGLKSKITHEENWGLKKLKYPIQNKRTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
S P E++ + + DE VLR L++ +D H ++
Sbjct: 61 HMFEHESDPQTTKELEVEFKRDERVLRWLSVKLDKHAVEYAEKRKKKQ 108
>gi|308273057|emb|CBX29661.1| 30S ribosomal protein S6 [uncultured Desulfobacterium sp.]
Length = 149
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++ DI + + + +I + G + +NE G + +AY I K + +Y
Sbjct: 1 MRRYETTVIIDPDIPPENRAPLLEKINEIISQKDGFLVKLNEWGTQKLAYEISKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V ++ + EM+R RID+ VL+ +T+L++ + + + + + +
Sbjct: 61 VHLDFCGTGLLVSEMERFFRIDDRVLKFMTILLEKNVDIEKIKAKIAELEAEAASSAQMN 120
Query: 121 NVDRKQHVSEE 131
++ +SEE
Sbjct: 121 KSEKTDPISEE 131
>gi|88809379|ref|ZP_01124887.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805]
gi|88786598|gb|EAR17757.1| 30S ribosomal protein S6 [Synechococcus sp. WH 7805]
Length = 123
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 56/101 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G +V G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHLTKYRDILVETGADVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
++ + +++ MR+ E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVAVLEKAMRLSEDVIRYLTVKQEGPLPAPRV 105
>gi|227824503|ref|ZP_03989335.1| 30S ribosomal protein S6P [Acidaminococcus sp. D21]
gi|226905002|gb|EEH90920.1| 30S ribosomal protein S6P [Acidaminococcus sp. D21]
Length = 94
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++++ + + + ++ L+ NG + ++ G + +AY I+ + Y
Sbjct: 1 MNNYEVMYIVKP-VEEEAYSAVVKKFDDLLTANGATIEKTDKWGKKHLAYPIQDIQDGLY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ PAA+ E+ R M+I + +LR + +
Sbjct: 60 VLTTFSAEPAAVKELDRVMKITDEILRHMIIRKGE 94
>gi|23008095|ref|ZP_00049682.1| COG0360: Ribosomal protein S6 [Magnetospirillum magnetotacticum
MS-1]
Length = 96
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + ++ +Y S+I+ +GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPEIEERTVAPSLDKYLSVIKTDGGSVDKVDIWGRRRLAYDINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ S E+ R++ ++E VLR+ L D+
Sbjct: 61 AVVDFTSTSDTAKELDRQLGLNEVVLRTKILRTDA 95
>gi|239624858|ref|ZP_04667889.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521244|gb|EEQ61110.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 95
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + Q + + + I GG V V+E G + +AY I+K +A+Y
Sbjct: 1 MNKYELTVVLNVKLEDDQRAAALEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + VD+
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVRVDA 95
>gi|297618491|ref|YP_003703650.1| ribosomal protein S6 [Syntrophothermus lipocalidus DSM 12680]
gi|297146328|gb|ADI03085.1| ribosomal protein S6 [Syntrophothermus lipocalidus DSM 12680]
Length = 97
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLV-NELGMRTIAYRIRKNRKAY 59
M+ YE +++LR D++ + I+ + +++I GGE G R +AY I + Y
Sbjct: 1 MRPYELMYILRPDLTPEAIEAAKERVRTIIASTGGEFEREAEGWGKRRLAYEIEDFTEGY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
YV P + E+ R ++I E+ LR + L +D
Sbjct: 61 YVVCYFKGQPETVRELDRVLKISEDFLRHIILRLDE 96
>gi|320530235|ref|ZP_08031305.1| ribosomal protein S6 [Selenomonas artemidis F0399]
gi|320137668|gb|EFW29580.1| ribosomal protein S6 [Selenomonas artemidis F0399]
Length = 100
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +F+++ + + I ++ LIQ NGG + + G + +AY I + + YYV +
Sbjct: 2 YEVIFIVKP-MEEEATNAVIEKFTKLIQANGGTIEKEDRWGKKRLAYEINDHSEGYYVLL 60
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + PA + E R M+I +++L+ + + +
Sbjct: 61 YVNAEPACVAECDRVMKITDDLLKHMIVRAE 91
>gi|297585578|ref|YP_003701358.1| 30S ribosomal protein S6 [Bacillus selenitireducens MLS10]
gi|297144035|gb|ADI00793.1| ribosomal protein S6 [Bacillus selenitireducens MLS10]
Length = 95
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 55/94 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R D+ Q +K+T+ ++ +++ NG E+ E+G R +AY I +Y
Sbjct: 1 MRKYEIMYIVRPDLEEQAVKETVERFNTILTNNGAELTETKEMGKRRLAYEIEDFTDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + + + A+ E R I++N+LRS+ + D
Sbjct: 61 VLIQLNANKDALDEFNRLSSINDNILRSIIVRED 94
>gi|307244717|ref|ZP_07526819.1| ribosomal protein S6 [Peptostreptococcus stomatis DSM 17678]
gi|306491894|gb|EFM63945.1| ribosomal protein S6 [Peptostreptococcus stomatis DSM 17678]
Length = 96
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++++ + + + + +++I E GEV ++ G R +AY I K R Y
Sbjct: 1 MKAYEVLYIVKPTLDDEAREAVLDSIKNIITEAKGEVGEIDVWGSRKLAYPIEKFRDGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N + E+ R+++I E+V+R + + + +
Sbjct: 61 TLVNFKADVEFPKELDRRLKISEDVIRHVIVAQEEN 96
>gi|88854482|ref|ZP_01129149.1| 30S ribosomal protein S6 [marine actinobacterium PHSC20C1]
gi|88816290|gb|EAR26145.1| 30S ribosomal protein S6 [marine actinobacterium PHSC20C1]
Length = 162
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKL-YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE + +L +I + + ++ ++ ++I+ +GG + ++ G R +AY I K +
Sbjct: 1 MTHQYELMVILDPEIDERTVAPSLDKFLNVIRNDGGSIDNIDIWGRRRLAYEINKKTEGI 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y +N + A+ E+ R++++ E V+R+ L ++
Sbjct: 61 YAVVNFTAESASTDELDRQLKLSEAVMRTKVLRAEA 96
>gi|218778774|ref|YP_002430092.1| 30S ribosomal protein S6 [Desulfatibacillum alkenivorans AK-01]
gi|226703451|sp|B8FI57|RS6_DESAA RecName: Full=30S ribosomal protein S6
gi|218760158|gb|ACL02624.1| ribosomal protein S6 [Desulfatibacillum alkenivorans AK-01]
Length = 185
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ D+ + Q LI E+ G + +E G R +AY ++K ++ YY
Sbjct: 1 MRRYETIFISDPDLPEDNRATLFEKMQGLIAEHDGYIAFFDEWGARKLAYEVKKKKRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
V M+ + + I EM+R MRID+ +L+ LT+ + + Q
Sbjct: 61 VLMDFCAEGSLIAEMERIMRIDDRILKFLTIQTEEEVDLDAVKEQ 105
>gi|290968077|ref|ZP_06559626.1| ribosomal protein S6 [Megasphaera genomosp. type_1 str. 28L]
gi|290781983|gb|EFD94562.1| ribosomal protein S6 [Megasphaera genomosp. type_1 str. 28L]
Length = 94
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+ R + + +K I +L+++NG +V + G R +AY ++K YY
Sbjct: 1 MNKYEVMFIARP-LEDEAVKPIIEFVDALLKKNGAKVEKIEPWGKRHLAYPVKKQNDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + P I E+ R M+I + +L+ L + +D
Sbjct: 60 VLVNFEAEPDIIKEIDRVMKIRDEILKQLIVKIDE 94
>gi|295697818|ref|YP_003591056.1| ribosomal protein S6 [Bacillus tusciae DSM 2912]
gi|295413420|gb|ADG07912.1| ribosomal protein S6 [Bacillus tusciae DSM 2912]
Length = 95
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++LR D+ + D + + ++ GGE++ VN G R +AY I +R+ YY
Sbjct: 1 MRNYETLYILRPDLEEEATADQVKRLAEVVTTAGGELQEVNTWGKRRMAYEIEGHREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V M AS E++R +RI E VLR + + D
Sbjct: 61 VLMKFASDTEVPKELERVLRISEPVLRYIVVREDE 95
>gi|161485955|ref|NP_739430.2| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
gi|32171562|sp|Q8FLP8|RS6_COREF RecName: Full=30S ribosomal protein S6
Length = 95
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 61 AVIDLKCESATVLELDRVLNLNDGVLRTKVLRLDK 95
>gi|312863010|ref|ZP_07723248.1| ribosomal protein S6 [Streptococcus vestibularis F0396]
gi|311100546|gb|EFQ58751.1| ribosomal protein S6 [Streptococcus vestibularis F0396]
Length = 96
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEANDDAALNEFDRLSKINGDILRHMIVKLDA 96
>gi|57237952|ref|YP_179201.1| 30S ribosomal protein S6 [Campylobacter jejuni RM1221]
gi|86150512|ref|ZP_01068737.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|148926027|ref|ZP_01809713.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205355822|ref|ZP_03222591.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|73621847|sp|Q5HU34|RS6_CAMJR RecName: Full=30S ribosomal protein S6
gi|4376254|emb|CAA76675.1| ribosomal protein S6 [Campylobacter jejuni]
gi|57166756|gb|AAW35535.1| ribosomal protein S6 [Campylobacter jejuni RM1221]
gi|85839107|gb|EAQ56371.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|145845506|gb|EDK22598.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346256|gb|EDZ32890.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|307747972|gb|ADN91242.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni M1]
gi|315058511|gb|ADT72840.1| SSU ribosomal protein S6p [Campylobacter jejuni subsp. jejuni S3]
Length = 125
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 56/102 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +N E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNSAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ +P I E++R +RI E V+R L + ++ ++
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW 102
>gi|228476958|ref|ZP_04061596.1| ribosomal protein S6 [Streptococcus salivarius SK126]
gi|322373708|ref|ZP_08048244.1| ribosomal protein S6 [Streptococcus sp. C150]
gi|228250977|gb|EEK10148.1| ribosomal protein S6 [Streptococcus salivarius SK126]
gi|321278750|gb|EFX55819.1| ribosomal protein S6 [Streptococcus sp. C150]
Length = 96
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVESDNDFALNEFDRLSKINGDILRHMIVKLDA 96
>gi|95930452|ref|ZP_01313188.1| ribosomal protein S6 [Desulfuromonas acetoxidans DSM 684]
gi|95133492|gb|EAT15155.1| ribosomal protein S6 [Desulfuromonas acetoxidans DSM 684]
Length = 121
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V ++ I + I +++ ++ + E+ V+E G + +AY ++K + Y
Sbjct: 1 MRTYETVLIVNPQIVGDEYTAVIEKFKGVLTDQNAEILKVDEWGTKRLAYPVKKCEQGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N + I E +R+MR+D+ V++ TL+++
Sbjct: 61 VLINFNAENVVIKEFERRMRLDDAVIKFQTLILE 94
>gi|126651977|ref|ZP_01724169.1| 30S ribosomal protein S6 [Bacillus sp. B14905]
gi|126591246|gb|EAZ85355.1| 30S ribosomal protein S6 [Bacillus sp. B14905]
Length = 95
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ + NG EV E G R +AY I+ R+ YY
Sbjct: 1 MRKYELMYIVRPNIEDEAKKALVERFNEALTSNGAEVIESKEWGKRRLAYEIQDFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + AI+E R I E+++R + + ++
Sbjct: 61 QIVKVNATSDAINEYTRLANISEDIIRHIAVRQEA 95
>gi|322433962|ref|YP_004216174.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX9]
gi|321161689|gb|ADW67394.1| ribosomal protein S6 [Acidobacterium sp. MP5ACTX9]
Length = 162
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D+ + + +Q I + GEV+ + ++G R +AY +RK +YV
Sbjct: 3 RTYEIMFIVRPDVEEADLDKLVEGFQKNITDGNGEVKSIEKMGRRRLAYTVRKFNDGFYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
MNIA+ I E++R++R+ E V++ +T+ +D E+ D + P
Sbjct: 63 LMNIAAEGQLITEIERRLRVSEPVIKFITVRMDEEEKRLAKIKAHRDTHVKRSAIP 118
>gi|225873663|ref|YP_002755122.1| ribosomal protein S6 [Acidobacterium capsulatum ATCC 51196]
gi|254765214|sp|C1F904|RS6_ACIC5 RecName: Full=30S ribosomal protein S6
gi|225792352|gb|ACO32442.1| ribosomal protein S6 [Acidobacterium capsulatum ATCC 51196]
Length = 141
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 57/97 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D++ +++ I + + GG +R ++G R +AY +RK + Y+
Sbjct: 3 RFYEVMFIVRPDLAEEEVDKIIASLEQTVTNGGGTIRSTEKMGRRKLAYLVRKFSEGNYI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + + E++R++R+ E V++ +T+ +D E+
Sbjct: 63 LLTVDADGPLVAELERRLRVTEQVIKFITVRMDEEEK 99
>gi|295691869|ref|YP_003600479.1| 30S ribosomal protein s6 [Lactobacillus crispatus ST1]
gi|295029975|emb|CBL49454.1| 30S ribosomal protein S6 [Lactobacillus crispatus ST1]
Length = 98
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEDNKKAVVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFSRLSKIDNAILRSMTVKLDK 98
>gi|255321380|ref|ZP_05362540.1| ribosomal protein S6 [Campylobacter showae RM3277]
gi|255301533|gb|EET80790.1| ribosomal protein S6 [Campylobacter showae RM3277]
Length = 128
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG + V +G R +AY ++K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVSAKVDFVKEILTKNGANIASVQSMGTRKLAYTVKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL-TIQRHDRDDRNDRFPRD 119
+ +P AI E++R +RI E++++ LT+ ++ ++ + + + ++ + +
Sbjct: 61 FVVYFEAPTQAIAEVERIIRITEDIIKFLTVKFENKKEIAAWEKMSKGIKLNKKEPKVKA 120
Query: 120 RNVDRKQH 127
Q
Sbjct: 121 EEAPTAQE 128
>gi|332672268|ref|YP_004455276.1| 30S ribosomal protein S6 [Cellulomonas fimi ATCC 484]
gi|332341306|gb|AEE47889.1| ribosomal protein S6 [Cellulomonas fimi ATCC 484]
Length = 97
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L +I + + ++ +Y S+++ +GG V V+ G R +AY I+K + Y
Sbjct: 4 RQYEIMIILDPEIEERTVAPSLDKYLSVVKTDGGTVDKVDIWGRRRLAYDIKKKSEGIYA 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + PA E+ R++ ++E VLR+ L D+
Sbjct: 64 VVDFTAEPATAKELDRQLGLNEVVLRTKVLRADA 97
>gi|51894455|ref|YP_077146.1| 30S ribosomal protein S6 [Symbiobacterium thermophilum IAM 14863]
gi|61216175|sp|Q67J48|RS6_SYMTH RecName: Full=30S ribosomal protein S6
gi|51858144|dbj|BAD42302.1| 30S ribosomal protein S6 [Symbiobacterium thermophilum IAM 14863]
Length = 95
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + R D+ ++ + LI NGG V + + +AY I+ R+ +Y
Sbjct: 1 MRKYEMMVIARPDLDEAGLQALSDKIAELITSNGGTVESQDAWKKQRLAYEIKHLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
N P +E+ R ++I + V+R L +
Sbjct: 61 SVFNFTGEPRTANELNRVLKITDEVVRFLIVR 92
>gi|319946351|ref|ZP_08020589.1| 30S ribosomal protein S6 [Streptococcus australis ATCC 700641]
gi|319747504|gb|EFV99759.1| 30S ribosomal protein S6 [Streptococcus australis ATCC 700641]
Length = 96
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA++E R +I+ ++LR + + VD+
Sbjct: 61 HIVNVEANDDAALNEFDRLSKINGDILRHMIVKVDA 96
>gi|296875863|ref|ZP_06899924.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 15912]
gi|312868241|ref|ZP_07728441.1| ribosomal protein S6 [Streptococcus parasanguinis F0405]
gi|322390177|ref|ZP_08063709.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 903]
gi|296433104|gb|EFH18890.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 15912]
gi|311095986|gb|EFQ54230.1| ribosomal protein S6 [Streptococcus parasanguinis F0405]
gi|321143137|gb|EFX38583.1| 30S ribosomal protein S6 [Streptococcus parasanguinis ATCC 903]
Length = 96
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + VD+
Sbjct: 61 HIVNVEANDAVALNEFDRLSKINGDILRHMIVKVDA 96
>gi|224373385|ref|YP_002607757.1| ribosomal protein S6 [Nautilia profundicola AmH]
gi|223588759|gb|ACM92495.1| ribosomal protein S6 [Nautilia profundicola AmH]
Length = 111
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 64/97 (65%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F+L+ ++ ++ + Q++I+ENGGEV ++++G+R +AY I K + Y
Sbjct: 4 RHYETMFILKPTLTDEERAKNVENIQNVIKENGGEVAALDKIGVRELAYPIAKFERGDYY 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ +P +A+ E++R+MR +E++LR +T+ ++ ++
Sbjct: 64 IVYYKAPASAVLELERQMRYNEDLLRFMTVKYENKKE 100
>gi|295394866|ref|ZP_06805079.1| 30S ribosomal protein S6 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972199|gb|EFG48061.1| 30S ribosomal protein S6 [Brevibacterium mcbrellneri ATCC 49030]
Length = 107
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L ++ + ++ T+ + +I GG V V+ G R AY I+K + YYV
Sbjct: 13 RKYELMLILDSELDERSVETTVEKLLHVIPAEGGTVDNVDIWGRRRFAYEIQKKSEGYYV 72
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + P E+ R++ I+E V+R+ + D+
Sbjct: 73 VVDFTANPDTTKELDRQLGINEIVVRTKIVRPDA 106
>gi|161598671|ref|NP_940593.2| 30S ribosomal protein S6 [Corynebacterium diphtheriae NCTC 13129]
gi|61215593|sp|Q6NEI3|RS6_CORDI RecName: Full=30S ribosomal protein S6
Length = 95
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E+ R + ++++V+R+ L D
Sbjct: 61 AVVNLTCESATVLELDRVLNLNDSVMRTKVLRGDK 95
>gi|78185873|ref|YP_378307.1| 30S ribosomal protein S6 [Synechococcus sp. CC9902]
gi|123580903|sp|Q3AVM1|RS6_SYNS9 RecName: Full=30S ribosomal protein S6
gi|78170167|gb|ABB27264.1| SSU ribosomal protein S6P [Synechococcus sp. CC9902]
Length = 126
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 56/101 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ +I E G EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHVTKYRDMIVEAGAEVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
++ + +++ MRI E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVEVLEKAMRISEDVIRYLTVKQEGPLPAPRV 105
>gi|308234047|ref|ZP_07664784.1| ribosomal protein S6 [Atopobium vaginae DSM 15829]
Length = 97
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + + + + + ++ENGG + V + G +AY I K + Y
Sbjct: 1 MKAYELLYFVSPSSTEEARDAVAKRIDTTVKENGGVIDNVEDWGKHKLAYEIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + P I E+ R +RI++ V+R + +
Sbjct: 61 TLIDFHADPTQIAELNRVLRINDTVVRHMIVRR 93
>gi|302669610|ref|YP_003829570.1| ribosomal protein S6 RpsF [Butyrivibrio proteoclasticus B316]
gi|302394083|gb|ADL32988.1| ribosomal protein S6 RpsF [Butyrivibrio proteoclasticus B316]
Length = 95
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I I + + I+++GG++ V++ G + +AY I K + +Y
Sbjct: 1 MNKYELAVVVSAKIEDDARTAVIEKVKKTIEKHGGQITNVDDWGKKKLAYEIEKMTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++ +MRI + V+R L + ++
Sbjct: 61 YFIQFDAEATTPAEIESRMRIMDGVIRYLCVKNEA 95
>gi|311746135|ref|ZP_07719920.1| ribosomal protein S6 [Algoriphagus sp. PR1]
gi|126576356|gb|EAZ80634.1| ribosomal protein S6 [Algoriphagus sp. PR1]
Length = 123
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 63/120 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF+L +S Q+KDT+ ++ +L++E G +V V G++ +AY I K +YV
Sbjct: 4 RNYETVFILTPVLSDVQMKDTVDKFVNLLKEEGADVINVENWGLKKMAYTIDKKTTGFYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + P I + + + R DE V+R LT +++ H + ++ + + + +
Sbjct: 64 LVEFKADPTVISKFELEFRRDEKVMRFLTTVLEKHGIAYAERRRKGEFNKKTEAKEEQAK 123
>gi|326790178|ref|YP_004307999.1| ribosomal protein S6 [Clostridium lentocellum DSM 5427]
gi|326540942|gb|ADZ82801.1| ribosomal protein S6 [Clostridium lentocellum DSM 5427]
Length = 96
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L +S ++ T+ + + LI GGE+ V++ G R +AY I K ++ +Y
Sbjct: 1 MRNYELSVVLFSTLSEEEKVATLEKVKDLIVRFGGEITNVDDWGKRKLAYEINKQKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + + E++ ++RI E VLR L + +D
Sbjct: 61 YFIQFQAETSVPAEIESRVRIMETVLRYLIVSLDE 95
>gi|160881892|ref|YP_001560860.1| ribosomal protein S6 [Clostridium phytofermentans ISDg]
gi|160430558|gb|ABX44121.1| ribosomal protein S6 [Clostridium phytofermentans ISDg]
Length = 95
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + T+ + LI GG + V++ G + +AY I+K ++ YY
Sbjct: 1 MNKYELALVVNAKIEDEAKNATVEAVKELITRFGGNITNVDDWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ E+++++RI ENV+R L + D+
Sbjct: 61 YFIKFDGDSTTPSEVEQRIRIMENVIRFLCIRQDA 95
>gi|55737711|gb|AAV61353.1| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311]
gi|55739631|gb|AAV63272.1| 30S ribosomal protein S6 [Streptococcus thermophilus CNRZ1066]
Length = 112
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 17 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 76
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 77 HVVNVEANDATALNEFDRLSKINGDILRHMIVKLDA 112
>gi|225869197|ref|YP_002745145.1| 30S ribosomal protein S6 [Streptococcus equi subsp.
zooepidemicus]
gi|225869849|ref|YP_002745796.1| 30S ribosomal protein S6 [Streptococcus equi subsp. equi 4047]
gi|254765454|sp|C0MB79|RS6_STRE4 RecName: Full=30S ribosomal protein S6
gi|259495344|sp|C0MEM1|RS6_STRS7 RecName: Full=30S ribosomal protein S6
gi|225699253|emb|CAW92564.1| 30S ribosomal protein S6 [Streptococcus equi subsp. equi 4047]
gi|225702473|emb|CAX00379.1| 30S ribosomal protein S6 [Streptococcus equi subsp.
zooepidemicus]
Length = 96
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|227548534|ref|ZP_03978583.1| ribosomal protein S6 [Corynebacterium lipophiloflavum DSM 44291]
gi|227079363|gb|EEI17326.1| ribosomal protein S6 [Corynebacterium lipophiloflavum DSM 44291]
Length = 98
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 46/94 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 5 RHYEVMIILDPQQDERTVAPSLDKFLETVRKDNGTVEKVDVWGKRRLAYPINKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + E+ R + ++E VLR+ L D
Sbjct: 65 VINLDCAAETVAELDRVLNLNEGVLRTKVLRTDK 98
>gi|295425408|ref|ZP_06818106.1| 30S ribosomal protein S6 [Lactobacillus amylolyticus DSM 11664]
gi|295064910|gb|EFG55820.1| 30S ribosomal protein S6 [Lactobacillus amylolyticus DSM 11664]
Length = 98
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+S + K + +Y I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVSEEDKKAVVDKYDKAIADNGGTMVESKDWGKRHFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFGRLSKIDNAILRSMTVKLDK 98
>gi|116071824|ref|ZP_01469092.1| Ribosomal protein S6 [Synechococcus sp. BL107]
gi|116065447|gb|EAU71205.1| Ribosomal protein S6 [Synechococcus sp. BL107]
Length = 126
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 56/101 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ +I E G EV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVESHVTKYRDMIVEAGAEVLDNQMRGKRRLAYPIAKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
++ + +++ MRI E+V+R LT+ + +P +
Sbjct: 65 QLSHNGDGQQVEVLEKAMRISEDVIRYLTVKQEGPLPAPRV 105
>gi|255284242|ref|ZP_05348797.1| ribosomal protein S6 [Bryantella formatexigens DSM 14469]
gi|255265195|gb|EET58400.1| ribosomal protein S6 [Bryantella formatexigens DSM 14469]
Length = 95
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I G + V+E G + +AY I+K + YY
Sbjct: 1 MNKYELAVVVNAKIEDDARTATVEKVKEYITRYNGTITNVDEWGKKKLAYEIQKMSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI ENVLR L + D+
Sbjct: 61 YFIQFEADAECPIELERHVRIMENVLRYLCVRQDA 95
>gi|169335536|ref|ZP_02862729.1| hypothetical protein ANASTE_01950 [Anaerofustis stercorihominis
DSM 17244]
gi|169258274|gb|EDS72240.1| hypothetical protein ANASTE_01950 [Anaerofustis stercorihominis
DSM 17244]
Length = 98
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M+ YE +F +R D++ +++K + + Q++I NGG+V V+E GM+ +AY+I K R AY
Sbjct: 4 MQKYETLFAVRPDMTEEEVKAMVEKIQNVITSNGGKVEEVDEWGMKKLAYKINNKYRDAY 63
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y +N + + + RI E+++R + +
Sbjct: 64 YTLINFEAEKPCLDALNHTFRITEDIIRDIIVKR 97
>gi|148265698|ref|YP_001232404.1| 30S ribosomal protein S6 [Geobacter uraniireducens Rf4]
gi|189045470|sp|A5G7R3|RS6_GEOUR RecName: Full=30S ribosomal protein S6
gi|146399198|gb|ABQ27831.1| SSU ribosomal protein S6P [Geobacter uraniireducens Rf4]
Length = 128
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 55/96 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+ +++K + Q +I G+ + + + G R +AY I K + Y
Sbjct: 1 MRMYETIFIVQPDLGEEEMKGISTKVQDVIASMKGDFKRLEDWGPRKLAYPINKFARGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++ A I E++R++R+D+ V+R ++ ++
Sbjct: 61 YYLRFDGDSALIAELERRLRLDDKVIRYQSVKLEKE 96
>gi|33864523|ref|NP_896083.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9313]
gi|61216285|sp|Q7V3T1|RS6_PROMM RecName: Full=30S ribosomal protein S6
gi|33641303|emb|CAE22433.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9313]
Length = 124
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 54/99 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I +++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVETHVTKYREMVTEAGAEVLDNQMRGKRRLAYPISNHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
++ + +++ MR+ E+V+R LT+ + +P
Sbjct: 65 QLSHNGNGQQVAVLEKAMRLSEDVIRYLTVKQEGPLPAP 103
>gi|227877547|ref|ZP_03995607.1| 30S ribosomal protein S6 [Lactobacillus crispatus JV-V01]
gi|256849620|ref|ZP_05555052.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-1A-US]
gi|262046288|ref|ZP_06019251.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-3A-US]
gi|227862846|gb|EEJ70305.1| 30S ribosomal protein S6 [Lactobacillus crispatus JV-V01]
gi|256713736|gb|EEU28725.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-1A-US]
gi|260573618|gb|EEX30175.1| 30S ribosomal protein S6 [Lactobacillus crispatus MV-3A-US]
Length = 98
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEDNKKALVENYDKVIADNGGTMVESKDWGQRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFSRLSKIDNAILRSMTVKLDK 98
>gi|266620040|ref|ZP_06112975.1| ribosomal protein S6 [Clostridium hathewayi DSM 13479]
gi|288868401|gb|EFD00700.1| ribosomal protein S6 [Clostridium hathewayi DSM 13479]
Length = 95
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLNVKLEDEERAAAIEKITNYITRFGGTVTNIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ +E++ ++RI E V+R L + ++
Sbjct: 61 YFIQFDGDSTTPNELESRVRIMEPVIRYLCVRQEA 95
>gi|317152941|ref|YP_004120989.1| 30S ribosomal protein S6 [Desulfovibrio aespoeensis Aspo-2]
gi|316943192|gb|ADU62243.1| ribosomal protein S6 [Desulfovibrio aespoeensis Aspo-2]
Length = 103
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 51/92 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + LL +++ + K + S+++ GG + ++ G+R +AY ++K + YYV
Sbjct: 10 NNYETLVLLSPELAEENRKGILDLLTSIVEREGGNMVETDDWGLRQLAYPVQKQTRGYYV 69
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ +P + E++R +RI + + + +T+ +
Sbjct: 70 RLVYDAPGNLVAELERNIRITDGIFKFMTVKL 101
>gi|119962193|ref|YP_949832.1| 30S ribosomal protein S6 [Arthrobacter aurescens TC1]
gi|166226797|sp|A1RC70|RS6_ARTAT RecName: Full=30S ribosomal protein S6
gi|119949052|gb|ABM07963.1| ribosomal protein S6 [Arthrobacter aurescens TC1]
Length = 101
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 54/94 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVESSLQKFLNVITTDGGTIEKVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + PA E+ R++ ++E ++R+ + +
Sbjct: 61 AVVNFTAAPATAKELDRQLSLNETIMRTKIIRPE 94
>gi|238855512|ref|ZP_04645817.1| ribosomal protein S6 [Lactobacillus jensenii 269-3]
gi|260665216|ref|ZP_05866065.1| ribosomal protein S6 [Lactobacillus jensenii SJ-7A-US]
gi|282931538|ref|ZP_06337037.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|313472769|ref|ZP_07813257.1| ribosomal protein S6 [Lactobacillus jensenii 1153]
gi|238831878|gb|EEQ24210.1| ribosomal protein S6 [Lactobacillus jensenii 269-3]
gi|260560953|gb|EEX26928.1| ribosomal protein S6 [Lactobacillus jensenii SJ-7A-US]
gi|281304345|gb|EFA96448.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|313448868|gb|EEQ68061.2| ribosomal protein S6 [Lactobacillus jensenii 1153]
Length = 97
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI + K + +Y +I +NG + + G R AY I K R+ Y
Sbjct: 4 KYEVTYIIKPDIDDEAKKAVVDKYDKIIADNGATMVESKDWGKRRFAYEINKYREGTYHI 63
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A+ E R RID VLRS+T+ +D
Sbjct: 64 MTFTAEDAKAVDEFGRLSRIDNQVLRSMTVKLDK 97
>gi|195977487|ref|YP_002122731.1| 30S ribosomal protein S6 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|226695287|sp|B4U151|RS6_STREM RecName: Full=30S ribosomal protein S6
gi|195974192|gb|ACG61718.1| 30S ribosomal protein S6 RpsF [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 96
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTNNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNLEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|149279560|ref|ZP_01885689.1| 30S ribosomal protein S6 [Pedobacter sp. BAL39]
gi|149229596|gb|EDM34986.1| 30S ribosomal protein S6 [Pedobacter sp. BAL39]
Length = 120
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V +L +S + K+ I ++ +I ++G E+ + G+R +AY I K ++
Sbjct: 1 MNQYETVIVLTPLLSEEVAKEAIAKFSKIITDSGAEIVQEDNWGLRKLAYPIEKKASGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
S I +++ ++ DE VLR LT+ +D H + + + + +
Sbjct: 61 HLTEYKSSGELITKLELALKRDERVLRFLTIRLDRHAVAYNEKKRSGAFNKKPKKEE 117
>gi|227834262|ref|YP_002835969.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
gi|262182995|ref|ZP_06042416.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
gi|254765232|sp|C3PKD0|RS6_CORA7 RecName: Full=30S ribosomal protein S6
gi|227455278|gb|ACP34031.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC
700975]
Length = 96
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ ++ I+++GG+V V+ G R +AY I K + Y
Sbjct: 1 MRHYEVMIILDPNQDERTVTPSLDKFLEAIRKDGGKVEKVDVWGKRRLAYPINKKEEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + ++ E+ R++ +++++LR+ L DS
Sbjct: 61 AVVELECESHSVLELDRRLNLNDSILRTKVLRTDS 95
>gi|329576167|gb|EGG57685.1| ribosomal protein S6 [Enterococcus faecalis TX1467]
Length = 105
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + + ++ +++++NG EV + R +AY + R+ Y
Sbjct: 6 KYEIMYIIRPNIDEEAKTALVERFDTILKDNGAEVIESKDWEKRRLAYEMNGFREGIYHI 65
Query: 63 MNIASPPA--AIHEMKRKMRIDENVLRSLTLL 92
+N+ SP AI+E R +I+++++R + +
Sbjct: 66 VNVTSPSTAGAINEFDRLAKINDDIIRHMIVK 97
>gi|312864936|ref|ZP_07725166.1| ribosomal protein S6 [Streptococcus downei F0415]
gi|311099556|gb|EFQ57770.1| ribosomal protein S6 [Streptococcus downei F0415]
Length = 96
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ +++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVERFDAILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESQDAHALNEFDRLSKINNDILRHMIVKLDA 96
>gi|302384672|ref|YP_003820494.1| ribosomal protein S6 [Clostridium saccharolyticum WM1]
gi|302195300|gb|ADL02871.1| ribosomal protein S6 [Clostridium saccharolyticum WM1]
Length = 95
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLNVKLEDEERAAAIEKVTGYITRFGGTVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ +E++ +RI E V+R L + ++
Sbjct: 61 YFIKFDGDSTTPNELEAHVRIMEPVIRYLCVRQEA 95
>gi|256851680|ref|ZP_05557068.1| ribosomal protein S6 [Lactobacillus jensenii 27-2-CHN]
gi|260661603|ref|ZP_05862515.1| ribosomal protein S6 [Lactobacillus jensenii 115-3-CHN]
gi|282934236|ref|ZP_06339513.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|297205289|ref|ZP_06922685.1| 30S ribosomal protein S6 [Lactobacillus jensenii JV-V16]
gi|256615638|gb|EEU20827.1| ribosomal protein S6 [Lactobacillus jensenii 27-2-CHN]
gi|260547660|gb|EEX23638.1| ribosomal protein S6 [Lactobacillus jensenii 115-3-CHN]
gi|281301710|gb|EFA93977.1| ribosomal protein S6 [Lactobacillus jensenii 208-1]
gi|297149867|gb|EFH30164.1| 30S ribosomal protein S6 [Lactobacillus jensenii JV-V16]
Length = 97
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI + K + +Y +I +NG + + G R AY I K R+ Y
Sbjct: 4 KYEVTYIIKPDIDDEAKKAVVDKYDKVIADNGATMVESKDWGKRRFAYEINKYREGTYHI 63
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A+ E R RID VLRS+T+ +D
Sbjct: 64 MTFTAEDAKAVDEFGRLSRIDNQVLRSMTVKLDK 97
>gi|56965864|ref|YP_177598.1| 30S ribosomal protein S6 [Bacillus clausii KSM-K16]
gi|61215393|sp|Q5WAH3|RS6_BACSK RecName: Full=30S ribosomal protein S6
gi|56912110|dbj|BAD66638.1| 30S ribosomal protein S6 [Bacillus clausii KSM-K16]
Length = 95
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 55/92 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ ++ K+ I +Y ++ +NG E+ V+E+G + +AY I + +Y
Sbjct: 1 MRKYEIMYIIAPNLEESANKEIIERYNKVLTDNGAEILKVDEIGKKRLAYEINDFKDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V +++ + AI+E R ++I++NV+R L
Sbjct: 61 VLLSVQANTEAINEFNRLIKINDNVIRVLVTK 92
>gi|217967745|ref|YP_002353251.1| ribosomal protein S6 [Dictyoglomus turgidum DSM 6724]
gi|226703456|sp|B8E0J2|RS6_DICTD RecName: Full=30S ribosomal protein S6
gi|217336844|gb|ACK42637.1| ribosomal protein S6 [Dictyoglomus turgidum DSM 6724]
Length = 97
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++S + K Q IQ GGEV+ V+ G RT+AY ++K + YY
Sbjct: 1 MRKYEIMCLISPELSEEDFKTLYEGIQQDIQNLGGEVQNVDVWGKRTLAYPVKKFTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V MN P + E +R++++ E +LR + L++ E
Sbjct: 61 VVMNFLFPQTQLPEFERRLKLREKLLRYMITLLEKEE 97
>gi|149194316|ref|ZP_01871413.1| 30S ribosomal protein S6 [Caminibacter mediatlanticus TB-2]
gi|149135491|gb|EDM23970.1| 30S ribosomal protein S6 [Caminibacter mediatlanticus TB-2]
Length = 111
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 55/93 (59%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +++ ++ ++ + I + +I + GEV V+ +G+R +AY I K + +Y
Sbjct: 4 RHYETMVIVKPTLTDEEKEAIIDNIKKVISDFKGEVVAVDNIGVRELAYPIEKFERGHYY 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +P A+ E++R++R +E VLR +T+ +
Sbjct: 64 IIYYKAPAEAVIELERQLRYNEEVLRFMTVKYE 96
>gi|218562684|ref|YP_002344463.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|9297123|sp|Q9ZAH3|RS6_CAMJE RecName: Full=30S ribosomal protein S6
gi|112360390|emb|CAL35187.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926299|gb|ADC28651.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928750|gb|EFV08025.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 305]
Length = 125
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 56/102 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +N E+ V +G R +AY+I+K + Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNTKLEFVKEVLTKNSAEIETVVPMGTRKLAYKIKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+ +P I E++R +RI E V+R L + ++ ++
Sbjct: 61 FVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW 102
>gi|317507599|ref|ZP_07965313.1| ribosomal protein S6 [Segniliparus rugosus ATCC BAA-974]
gi|316254119|gb|EFV13475.1| ribosomal protein S6 [Segniliparus rugosus ATCC BAA-974]
Length = 95
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + + + +++E GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMLILDPNIDERTVAPAVDKLLGVVREEGGAVEKVDVWGRRRLAYEIAKKGEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + + + E+ R++RI+E VLR+ L D
Sbjct: 61 AVVDLKAQSSTVSELDRQLRINETVLRAKVLRKDK 95
>gi|94263202|ref|ZP_01287019.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|94270366|ref|ZP_01291724.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|93450832|gb|EAT01865.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
gi|93456420|gb|EAT06540.1| Ribosomal protein S6 [delta proteobacterium MLMS-1]
Length = 126
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 1 MKLYEHVFLLRQDIS-SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M+ YE V ++R + +I +Y ++I E GEV VN G++ +AY ++K + +
Sbjct: 1 MRKYESVIIVRPGAAAEAEITAVSDKYAAVISEYQGEVASVNHWGLKRLAYPVKKENQGF 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPTLTIQRHDRDDRNDRFPR 118
Y+ + P I EM+R +RID+ +L+ LT+ + D + S +T D+ D+
Sbjct: 61 YLLLRYLCNPDGIKEMERLLRIDDRILKFLTVRLDDDLDISGAVTAADGDQADQAREDVA 120
Query: 119 DRNV 122
+ +
Sbjct: 121 EESA 124
>gi|329944678|ref|ZP_08292788.1| ribosomal protein S6 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530092|gb|EGF56978.1| ribosomal protein S6 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 95
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E VLR+ L ++
Sbjct: 61 VVVDMTTTPETAQELDRQLGLNETVLRTKLLRPEA 95
>gi|306834254|ref|ZP_07467373.1| 30S ribosomal protein S6 [Streptococcus bovis ATCC 700338]
gi|325979064|ref|YP_004288780.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304423603|gb|EFM26750.1| 30S ribosomal protein S6 [Streptococcus bovis ATCC 700338]
gi|325178992|emb|CBZ49036.1| 30S ribosomal protein S6 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 96
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVETEDATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|171779260|ref|ZP_02920231.1| hypothetical protein STRINF_01108 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282316|gb|EDT47743.1| hypothetical protein STRINF_01108 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 96
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEAEDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|225386695|ref|ZP_03756459.1| hypothetical protein CLOSTASPAR_00443 [Clostridium asparagiforme
DSM 15981]
gi|225047222|gb|EEG57468.1| hypothetical protein CLOSTASPAR_00443 [Clostridium asparagiforme
DSM 15981]
Length = 95
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ + + + I GG V V+E G + +AY I+K +AYY
Sbjct: 1 MNKYELTVVLNVKLEDEERAAALEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + VD+
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVRVDA 95
>gi|160916103|ref|ZP_02078310.1| hypothetical protein EUBDOL_02130 [Eubacterium dolichum DSM 3991]
gi|158431827|gb|EDP10116.1| hypothetical protein EUBDOL_02130 [Eubacterium dolichum DSM 3991]
Length = 97
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 52/97 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + + +I ++ G + V++ G++ AY I+ K +Y
Sbjct: 1 MKKYEIMYIVNASLDEAASQKVMDSLHKIITDHEGTIDNVDDWGVKEFAYEIKHMNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V +N+ + IHE +R RI+ NV+R + + ++ +
Sbjct: 61 VVINVTANNEGIHEFERLARINPNVVRYMVVKTEAEK 97
>gi|329116870|ref|ZP_08245587.1| ribosomal protein S6 [Streptococcus parauberis NCFD 2020]
gi|326907275|gb|EGE54189.1| ribosomal protein S6 [Streptococcus parauberis NCFD 2020]
Length = 96
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILSDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEATDAVALNEFDRLSKINGDILRHMIVKLDA 96
>gi|289607152|emb|CBI60876.1| unnamed protein product [Sordaria macrospora]
Length = 121
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 17/108 (15%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEHVFL RQD++ Q+ ++Q+ G+V NRKA+Y
Sbjct: 1 MALYEHVFLARQDLAQAQVDALAETATKIVQDMNGKV-----------------NRKAHY 43
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
V + I +P + E++R+ +I+E+V+R +T+ VD+HE+ PT+ +++ +
Sbjct: 44 VMLEIDAPGDVVAELERQTQINEDVIRFMTVKVDAHEEGPTVMMRKSE 91
>gi|296392715|ref|YP_003657599.1| 30S ribosomal protein S6 [Segniliparus rotundus DSM 44985]
gi|296179862|gb|ADG96768.1| ribosomal protein S6 [Segniliparus rotundus DSM 44985]
Length = 95
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L +I + + + + +++E GG V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMLILDPNIDERTVAPAVDKLLGVVREEGGSVEKVDVWGRRRLAYEIAKRGEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + + + E+ R++RI+E VLR+ L D
Sbjct: 61 AVVDLKAQSSTVSELDRQLRINETVLRAKVLRKDK 95
>gi|255530651|ref|YP_003091023.1| 30S ribosomal protein S6 [Pedobacter heparinus DSM 2366]
gi|255343635|gb|ACU02961.1| ribosomal protein S6 [Pedobacter heparinus DSM 2366]
Length = 119
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V +L +S + K+ I ++ +I ++G E+ + G+R +AY I K ++
Sbjct: 1 MNQYETVIVLTPLLSEEVAKEAIAKFSKIIADSGAEIVQEDNWGLRKLAYPIEKKASGFF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
S I++++ +++ DE VLR LT+ +D H + R ++ P+
Sbjct: 61 HLTEYKSSGELINKLELELKRDERVLRFLTIRLDRH----AVAYNEKKRSGAFNKKPKQE 116
Query: 121 NV 122
Sbjct: 117 AA 118
>gi|164686460|ref|ZP_02210488.1| hypothetical protein CLOBAR_00025 [Clostridium bartlettii DSM
16795]
gi|164604471|gb|EDQ97936.1| hypothetical protein CLOBAR_00025 [Clostridium bartlettii DSM
16795]
Length = 92
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE V++++ + + + + + + +I N GEV V+ G + +AY+I K + +Y
Sbjct: 1 MKNYELVYVVKPNSDDETKESVLNKIKDVISSN-GEVEKVDTWGNKKLAYQIAKFTEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N S E+ R ++I+ENV+R + +
Sbjct: 60 VLVNFKSGVEVPKELDRNLKINENVIRHMIV 90
>gi|269216496|ref|ZP_06160350.1| ribosomal protein S6 [Slackia exigua ATCC 700122]
gi|269130025|gb|EEZ61107.1| ribosomal protein S6 [Slackia exigua ATCC 700122]
Length = 110
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + ++ I +N G + V + G R +AY I + Y
Sbjct: 14 MKAYELLFFVSPTIEDEVRLAAMKRVETAINDNNGTIDNVEDWGRRKLAYEIAGLTEGDY 73
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + P +I E+ R +RI + V+R + D
Sbjct: 74 TLIDFHADPESIAELDRILRITDAVVRHKIVRRD 107
>gi|300780220|ref|ZP_07090076.1| 30S ribosomal protein S6 [Corynebacterium genitalium ATCC 33030]
gi|300534330|gb|EFK55389.1| 30S ribosomal protein S6 [Corynebacterium genitalium ATCC 33030]
Length = 99
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + YV
Sbjct: 5 RHYEVMIILDPSQDERTVAPSLDKFLDIVRQDNGKVENVDVWGKRRLAYPIDKKEEGVYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + E+ R++ +++ ++R+ L DS
Sbjct: 65 VVNLDCAAETVQELDRRLNLNDTIMRTKVLRTDS 98
>gi|315635661|ref|ZP_07890924.1| 30S ribosomal protein S6 [Arcobacter butzleri JV22]
gi|315479958|gb|EFU70628.1| 30S ribosomal protein S6 [Arcobacter butzleri JV22]
Length = 107
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 60/98 (61%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F+L+ ++ ++ I ++LI++NGGE+ + +G+R +AY I K ++ YY
Sbjct: 5 KHYETMFILKPTLTEEETVAQIDGIKALIEKNGGEISSTDNVGIRELAYEIEKCKRGYYY 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ P+ I E++R R +EN++R + + D+ ++S
Sbjct: 65 VIYFKGNPSGIAEIERNYRNNENLIRFIFIKYDTKKRS 102
>gi|257070271|ref|YP_003156526.1| 30S ribosomal protein S6P [Brachybacterium faecium DSM 4810]
gi|256561089|gb|ACU86936.1| SSU ribosomal protein S6P [Brachybacterium faecium DSM 4810]
Length = 96
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L + + + T + +I GG + V+ G R AY I K + Y
Sbjct: 1 MRKYEMVVILDPSVDERTVTGTFEKLVQVIPTEGGTIDNVDVWGKRKFAYEIDKKTEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ ++ + + E+ R++ ++E+V+R+ + +D
Sbjct: 61 IVLSFTAKASTAQELDRQLGLNESVMRTKVMRLD 94
>gi|311740294|ref|ZP_07714125.1| 30S ribosomal protein S6 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304677|gb|EFQ80749.1| 30S ribosomal protein S6 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 99
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 52/94 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + + ++ ++ ++++ GG+V ++ G R +AY I K + Y
Sbjct: 5 RHYEVMIILDPNQDERTVTPSLDKFLEIVRQEGGKVENLDVWGKRRLAYPINKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 65 VVNLECEHTSVAELDRRLNLNDTILRTKVLRTDS 98
>gi|261885713|ref|ZP_06009752.1| 30S ribosomal protein S6 [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 131
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ + K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYELLFILKPTLTEDEAKVKVDFIKEVITKNGGEIASVIEMGTRKLAYKIDKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
V + +P I E+ R +RI E ++R LT+ ++ +
Sbjct: 61 VVIYFMAPTQLIAELVRNVRITEEIIRFLTVKYENKREISAW 102
>gi|158335092|ref|YP_001516264.1| 30S ribosomal protein S6 [Acaryochloris marina MBIC11017]
gi|158305333|gb|ABW26950.1| 30S ribosomal protein S6 [Acaryochloris marina MBIC11017]
Length = 108
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR D+ +Q+ I +YQ L++E G E G R +AY I+ R+ Y
Sbjct: 1 MTAYETMYILRPDLGEEQLDQAINKYQDLLKEQGVEDIDTQHRGKRRLAYEIQNFREGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ MN AI +++R+MRI E V+R LTL + P + D
Sbjct: 61 IQMNYNGQGHAIAKLEREMRISEQVIRYLTLK----HEGPAANADEDESDSE 108
>gi|324992068|gb|EGC23990.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK405]
gi|324994161|gb|EGC26075.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK678]
gi|325688010|gb|EGD30029.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK72]
Length = 96
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+NI + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNIEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|320547487|ref|ZP_08041773.1| 30S ribosomal protein S6 [Streptococcus equinus ATCC 9812]
gi|320447832|gb|EFW88589.1| 30S ribosomal protein S6 [Streptococcus equinus ATCC 9812]
Length = 96
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVVNVEAEDAVALNEFDRLSKINGDILRHMIVKIDA 96
>gi|225181167|ref|ZP_03734613.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
gi|225168136|gb|EEG76941.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
Length = 96
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M YE +F+L+ ++ + + +++ +++ G EV VN +G R +AY + +K + Y
Sbjct: 1 MNKYETMFILKPELEEEAYDTLVERFKGILEGEGAEVTNVNRMGRRKLAYEVKKKFNEGY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
YV N A E++R RI ++V+R L + +
Sbjct: 61 YVLFNYTGESRATDELERNFRISDDVIRYLFVKEEE 96
>gi|37520003|ref|NP_923380.1| 30S ribosomal protein S6 [Gloeobacter violaceus PCC 7421]
gi|61215683|sp|Q7NNH7|RS6_GLOVI RecName: Full=30S ribosomal protein S6
gi|35210995|dbj|BAC88375.1| 30S ribosomal protein S6 [Gloeobacter violaceus PCC 7421]
Length = 96
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 53/90 (58%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++LR D++ + I TI +YQ+L+ E G G R +AY ++K ++ YV
Sbjct: 4 KYETMYILRPDLTDEIIDQTITRYQTLLAEQGAAPVETQHRGKRRLAYELKKFKEGIYVQ 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
MN +P A+ E+++ R+ E V+R LT+
Sbjct: 64 MNYDAPTTAVAELEKAFRLSEEVIRFLTVR 93
>gi|161506641|ref|YP_001576589.1| 30S ribosomal protein S6 [Lactobacillus helveticus DPC 4571]
gi|189045473|sp|A8YW47|RS6_LACH4 RecName: Full=30S ribosomal protein S6
gi|160347630|gb|ABX26304.1| 30S ribosomal protein S6 [Lactobacillus helveticus DPC 4571]
gi|323465564|gb|ADX69251.1| 30S ribosomal protein S6 [Lactobacillus helveticus H10]
gi|328468766|gb|EGF39737.1| 30S ribosomal protein S6 [Lactobacillus helveticus MTCC 5463]
Length = 98
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ + K + Y +I +NGG + + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEESKKALVENYDKVIADNGGTMVESKDWGKRRFAYEIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFGRLSKIDNMILRSMTVKLDK 98
>gi|124024695|ref|YP_001019002.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9303]
gi|166227364|sp|A2CE27|RS6_PROM3 RecName: Full=30S ribosomal protein S6
gi|123964981|gb|ABM79737.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9303]
Length = 124
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 54/99 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR DI ++++ + +Y+ ++ E G EV G R +AY I +++ YV
Sbjct: 5 PYYETMYILRPDIPEEEVETHVTKYREMVTEAGAEVLDNQMRGKRRLAYPISNHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
++ + +++ MR+ E+V+R LT+ + +P
Sbjct: 65 QLSHNGNGQQVAVLEKAMRLSEDVIRYLTVKQEGPLPAP 103
>gi|311115043|ref|YP_003986264.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14019]
gi|310946537|gb|ADP39241.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14019]
Length = 131
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV
Sbjct: 38 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSVDGTDYWGRRKLAYEIDGKTEGNYVV 97
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + PA E+ R + ++E+V+R+ L D+
Sbjct: 98 VNYTAEPALSDELDRVLNLNESVVRTKILRKDA 130
>gi|311742124|ref|ZP_07715934.1| 30S ribosomal protein S6 [Aeromicrobium marinum DSM 15272]
gi|311314617|gb|EFQ84524.1| 30S ribosomal protein S6 [Aeromicrobium marinum DSM 15272]
Length = 98
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 53/93 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ Y ++I+ +GG V V+ G R AY I K + Y
Sbjct: 4 RHYEVMVILDASLDERTVEPSLDTYLNVIRADGGSVDKVDVWGKRRFAYEINKQTEGIYA 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + PAA+ E+ R++ ++E+V+R+ D
Sbjct: 64 VLDLQATPAAVKELDRQLGLNESVVRTKVQRPD 96
>gi|154503454|ref|ZP_02040514.1| hypothetical protein RUMGNA_01278 [Ruminococcus gnavus ATCC 29149]
gi|153795554|gb|EDN77974.1| hypothetical protein RUMGNA_01278 [Ruminococcus gnavus ATCC 29149]
Length = 136
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I I + + +I GG V V+E G R AY I+K ++ +Y
Sbjct: 42 MNKYELAVVVSAKIEDDARAAVIEKVKEMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 101
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S + E+++++RI +NVLR L + ++
Sbjct: 102 YFVHFESDASVPGEIEQRIRIMDNVLRYLCVRQEA 136
>gi|317050836|ref|YP_004111952.1| 30S ribosomal protein S6 [Desulfurispirillum indicum S5]
gi|316945920|gb|ADU65396.1| ribosomal protein S6 [Desulfurispirillum indicum S5]
Length = 145
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ QQ+ D I + +I G + G + +AY I +Y
Sbjct: 1 MKKYELMFILKPELDEQQLADYIARVDGIIARYEGTIDKFENWGKKKLAYEIDNKSFGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A I E++R +I + ++R ++L +D
Sbjct: 61 YLYHLSCASALIDELERNFKISDEMMRFISLRLDK 95
>gi|258405218|ref|YP_003197960.1| 30S ribosomal protein S6 [Desulfohalobium retbaense DSM 5692]
gi|257797445|gb|ACV68382.1| ribosomal protein S6 [Desulfohalobium retbaense DSM 5692]
Length = 106
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 54/92 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + L ++ + ++T+ ++ +I GG++ ++ G RT+AY I+K + +YV
Sbjct: 3 NKYEALLLFHPEVGTDGRRETLDKFAGVINSQGGQIVEEDDWGKRTLAYPIQKVTRGHYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ A A+ E++R++RI + +++ LT+ +
Sbjct: 63 RLEFALEGTAVTELERRIRITDGIMKFLTVKL 94
>gi|254526151|ref|ZP_05138203.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9202]
gi|221537575|gb|EEE40028.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9202]
Length = 143
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR DI+ ++ + I +Y L++E GG + G R +AY+I K+R+ YV ++
Sbjct: 1 MYILRPDIAEDEVTNHIDKYNKLLEEFGGSILDSQMRGKRRLAYQIAKHREGIYVQLSHQ 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQ 126
I ++++ MR+ E+V+R +T+ + +P + + + D +N + K
Sbjct: 61 GDGQHIFKIEKAMRLSEDVIRYMTVKQEGPLPTPRPSTKSSTQAD------DQKNPETKV 114
Query: 127 HVSEEKPL 134
E+P+
Sbjct: 115 ESKGEQPV 122
>gi|160940067|ref|ZP_02087412.1| hypothetical protein CLOBOL_04956 [Clostridium bolteae ATCC
BAA-613]
gi|158436647|gb|EDP14414.1| hypothetical protein CLOBOL_04956 [Clostridium bolteae ATCC
BAA-613]
Length = 95
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + +Q I + + I GG V V+E G + +AY I+K +AYY
Sbjct: 1 MNKYELTVVLNVKLEDEQRAAAIEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMHEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + ++
Sbjct: 61 YFIQFESDSVCPNEVEAHIRIMEPVIRYLCVKAEA 95
>gi|324990244|gb|EGC22182.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK353]
gi|332357974|gb|EGJ35807.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1056]
Length = 96
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|312898033|ref|ZP_07757439.1| ribosomal protein S6 [Megasphaera micronuciformis F0359]
gi|310620858|gb|EFQ04412.1| ribosomal protein S6 [Megasphaera micronuciformis F0359]
Length = 102
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F+ + + ++ + +L+ +NG ++ V+ G R +AY ++K YYV
Sbjct: 10 KKYEVMFIAKP-LEEAEVTPIVEFISNLLTKNGAKIEKVDLWGKRHLAYPVKKQNDGYYV 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N P AI E+ R ++I E +LR L + +
Sbjct: 69 LINFEIEPDAIFEIDRVIKIREEILRHLIVKIGE 102
>gi|313889708|ref|ZP_07823351.1| ribosomal protein S6 [Streptococcus pseudoporcinus SPIN 20026]
gi|332523368|ref|ZP_08399620.1| ribosomal protein S6 [Streptococcus porcinus str. Jelinkova 176]
gi|313122005|gb|EFR45101.1| ribosomal protein S6 [Streptococcus pseudoporcinus SPIN 20026]
gi|332314632|gb|EGJ27617.1| ribosomal protein S6 [Streptococcus porcinus str. Jelinkova 176]
Length = 96
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESEEATALNEFDRLSKINGDILRHMIVKLDA 96
>gi|125717304|ref|YP_001034437.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK36]
gi|322387420|ref|ZP_08061030.1| 30S ribosomal protein S6 [Streptococcus infantis ATCC 700779]
gi|322391657|ref|ZP_08065125.1| 30S ribosomal protein S6 [Streptococcus peroris ATCC 700780]
gi|323353391|ref|ZP_08087924.1| 30S ribosomal protein S6 [Streptococcus sanguinis VMC66]
gi|166227394|sp|A3CL32|RS6_STRSV RecName: Full=30S ribosomal protein S6
gi|125497221|gb|ABN43887.1| 30S ribosomal protein S6, putative [Streptococcus sanguinis SK36]
gi|321141949|gb|EFX37444.1| 30S ribosomal protein S6 [Streptococcus infantis ATCC 700779]
gi|321145468|gb|EFX40861.1| 30S ribosomal protein S6 [Streptococcus peroris ATCC 700780]
gi|322121337|gb|EFX93100.1| 30S ribosomal protein S6 [Streptococcus sanguinis VMC66]
gi|325690405|gb|EGD32409.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK115]
gi|325693671|gb|EGD35590.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK150]
gi|325697623|gb|EGD39508.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK160]
gi|327459370|gb|EGF05716.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1]
gi|327469242|gb|EGF14714.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK330]
gi|327472791|gb|EGF18218.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK408]
gi|327490586|gb|EGF22367.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1058]
gi|328945791|gb|EGG39942.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1087]
gi|332363246|gb|EGJ41031.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK49]
gi|332363796|gb|EGJ41575.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK355]
gi|332364670|gb|EGJ42439.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1059]
Length = 96
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|331091913|ref|ZP_08340745.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330402812|gb|EGG82379.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 95
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I +TI + + +I GG V V+E G R +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKIEDDARTETIEKVKEIIARFGGNVTDVDEWGKRRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E++ ++RI ENV+R L + D+
Sbjct: 61 YFIHFESDSTVPAEVESRLRIMENVIRFLCIRQDA 95
>gi|78224040|ref|YP_385787.1| 30S ribosomal protein S6 [Geobacter metallireducens GS-15]
gi|91207916|sp|Q39RR2|RS6_GEOMG RecName: Full=30S ribosomal protein S6
gi|78195295|gb|ABB33062.1| SSU ribosomal protein S6P [Geobacter metallireducens GS-15]
Length = 118
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V +++ D+ ++K + +I G++ + + G+R +AY I K+ + Y
Sbjct: 3 RKYETVVIVQPDLGDDELKGLNAKVTDIIATMKGDLHRLEDWGVRKLAYPINKSARGRYY 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ A I E++R++R+D+ VLR ++ ++
Sbjct: 63 YVRFDGDAALIAELERRLRLDDKVLRYQSVKIEKET 98
>gi|319939921|ref|ZP_08014276.1| 30S ribosomal protein S6 [Streptococcus anginosus 1_2_62CV]
gi|319810932|gb|EFW07251.1| 30S ribosomal protein S6 [Streptococcus anginosus 1_2_62CV]
Length = 96
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEAEDAVALNEFDRLSKINADILRHMIVKLDA 96
>gi|29374668|ref|NP_813820.1| 30S ribosomal protein S6 [Enterococcus faecalis V583]
gi|227518102|ref|ZP_03948151.1| 30S ribosomal protein S6 [Enterococcus faecalis TX0104]
gi|227555691|ref|ZP_03985738.1| 30S ribosomal protein S6 [Enterococcus faecalis HH22]
gi|229547123|ref|ZP_04435848.1| 30S ribosomal protein S6 [Enterococcus faecalis TX1322]
gi|229550693|ref|ZP_04439418.1| 30S ribosomal protein S6 [Enterococcus faecalis ATCC 29200]
gi|255971555|ref|ZP_05422141.1| ribosomal protein S6 [Enterococcus faecalis T1]
gi|255974528|ref|ZP_05425114.1| ribosomal protein S6 [Enterococcus faecalis T2]
gi|256618521|ref|ZP_05475367.1| ribosomal protein S6 [Enterococcus faecalis ATCC 4200]
gi|256761860|ref|ZP_05502440.1| ribosomal protein S6 [Enterococcus faecalis T3]
gi|256854987|ref|ZP_05560348.1| ribosomal protein S6 [Enterococcus faecalis T8]
gi|256957009|ref|ZP_05561180.1| ribosomal protein S6 [Enterococcus faecalis DS5]
gi|256960818|ref|ZP_05564989.1| 30S ribosomal protein S6 [Enterococcus faecalis Merz96]
gi|256963989|ref|ZP_05568160.1| 30S ribosomal protein S6 [Enterococcus faecalis HIP11704]
gi|257078686|ref|ZP_05573047.1| 30S ribosomal protein S6 [Enterococcus faecalis JH1]
gi|257081353|ref|ZP_05575714.1| ribosomal protein S6 [Enterococcus faecalis E1Sol]
gi|257084010|ref|ZP_05578371.1| 30S ribosomal protein S6 [Enterococcus faecalis Fly1]
gi|257087840|ref|ZP_05582201.1| ribosomal protein S6 [Enterococcus faecalis D6]
gi|257088492|ref|ZP_05582853.1| 30S ribosomal protein S6 [Enterococcus faecalis CH188]
gi|257417432|ref|ZP_05594426.1| ribosomal protein S6 [Enterococcus faecalis AR01/DG]
gi|257418836|ref|ZP_05595830.1| 30S ribosomal protein S6 [Enterococcus faecalis T11]
gi|257421349|ref|ZP_05598339.1| 30S ribosomal protein S6 [Enterococcus faecalis X98]
gi|293382656|ref|ZP_06628584.1| ribosomal protein S6 [Enterococcus faecalis R712]
gi|293387932|ref|ZP_06632468.1| ribosomal protein S6 [Enterococcus faecalis S613]
gi|294780770|ref|ZP_06746128.1| ribosomal protein S6 [Enterococcus faecalis PC1.1]
gi|300861937|ref|ZP_07108017.1| ribosomal protein S6 [Enterococcus faecalis TUSoD Ef11]
gi|307268923|ref|ZP_07550287.1| ribosomal protein S6 [Enterococcus faecalis TX4248]
gi|307274018|ref|ZP_07555228.1| ribosomal protein S6 [Enterococcus faecalis TX0855]
gi|307276493|ref|ZP_07557613.1| ribosomal protein S6 [Enterococcus faecalis TX2134]
gi|307284065|ref|ZP_07564235.1| ribosomal protein S6 [Enterococcus faecalis TX0860]
gi|307287175|ref|ZP_07567246.1| ribosomal protein S6 [Enterococcus faecalis TX0109]
gi|307296596|ref|ZP_07576416.1| ribosomal protein S6 [Enterococcus faecalis TX0411]
gi|312901290|ref|ZP_07760573.1| ribosomal protein S6 [Enterococcus faecalis TX0470]
gi|312903113|ref|ZP_07762294.1| ribosomal protein S6 [Enterococcus faecalis TX0635]
gi|312908808|ref|ZP_07767747.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 512]
gi|312951714|ref|ZP_07770608.1| ribosomal protein S6 [Enterococcus faecalis TX0102]
gi|312979550|ref|ZP_07791232.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 516]
gi|61215751|sp|Q839Z0|RS6_ENTFA RecName: Full=30S ribosomal protein S6
gi|29342126|gb|AAO79892.1| ribosomal protein S6 [Enterococcus faecalis V583]
gi|227074450|gb|EEI12413.1| 30S ribosomal protein S6 [Enterococcus faecalis TX0104]
gi|227175149|gb|EEI56121.1| 30S ribosomal protein S6 [Enterococcus faecalis HH22]
gi|229304194|gb|EEN70190.1| 30S ribosomal protein S6 [Enterococcus faecalis ATCC 29200]
gi|229307779|gb|EEN73766.1| 30S ribosomal protein S6 [Enterococcus faecalis TX1322]
gi|255962573|gb|EET95049.1| ribosomal protein S6 [Enterococcus faecalis T1]
gi|255967400|gb|EET98022.1| ribosomal protein S6 [Enterococcus faecalis T2]
gi|256598048|gb|EEU17224.1| ribosomal protein S6 [Enterococcus faecalis ATCC 4200]
gi|256683111|gb|EEU22806.1| ribosomal protein S6 [Enterococcus faecalis T3]
gi|256709500|gb|EEU24547.1| ribosomal protein S6 [Enterococcus faecalis T8]
gi|256947505|gb|EEU64137.1| ribosomal protein S6 [Enterococcus faecalis DS5]
gi|256951314|gb|EEU67946.1| 30S ribosomal protein S6 [Enterococcus faecalis Merz96]
gi|256954485|gb|EEU71117.1| 30S ribosomal protein S6 [Enterococcus faecalis HIP11704]
gi|256986716|gb|EEU74018.1| 30S ribosomal protein S6 [Enterococcus faecalis JH1]
gi|256989383|gb|EEU76685.1| ribosomal protein S6 [Enterococcus faecalis E1Sol]
gi|256992040|gb|EEU79342.1| 30S ribosomal protein S6 [Enterococcus faecalis Fly1]
gi|256995870|gb|EEU83172.1| ribosomal protein S6 [Enterococcus faecalis D6]
gi|256997304|gb|EEU83824.1| 30S ribosomal protein S6 [Enterococcus faecalis CH188]
gi|257159260|gb|EEU89220.1| ribosomal protein S6 [Enterococcus faecalis ARO1/DG]
gi|257160664|gb|EEU90624.1| 30S ribosomal protein S6 [Enterococcus faecalis T11]
gi|257163173|gb|EEU93133.1| 30S ribosomal protein S6 [Enterococcus faecalis X98]
gi|291079962|gb|EFE17326.1| ribosomal protein S6 [Enterococcus faecalis R712]
gi|291082669|gb|EFE19632.1| ribosomal protein S6 [Enterococcus faecalis S613]
gi|294452132|gb|EFG20576.1| ribosomal protein S6 [Enterococcus faecalis PC1.1]
gi|295112346|emb|CBL30983.1| SSU ribosomal protein S6P [Enterococcus sp. 7L76]
gi|300848462|gb|EFK76219.1| ribosomal protein S6 [Enterococcus faecalis TUSoD Ef11]
gi|306495932|gb|EFM65520.1| ribosomal protein S6 [Enterococcus faecalis TX0411]
gi|306501773|gb|EFM71064.1| ribosomal protein S6 [Enterococcus faecalis TX0109]
gi|306503436|gb|EFM72685.1| ribosomal protein S6 [Enterococcus faecalis TX0860]
gi|306506820|gb|EFM75970.1| ribosomal protein S6 [Enterococcus faecalis TX2134]
gi|306509326|gb|EFM78386.1| ribosomal protein S6 [Enterococcus faecalis TX0855]
gi|306514731|gb|EFM83282.1| ribosomal protein S6 [Enterococcus faecalis TX4248]
gi|310625246|gb|EFQ08529.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 512]
gi|310630287|gb|EFQ13570.1| ribosomal protein S6 [Enterococcus faecalis TX0102]
gi|310633504|gb|EFQ16787.1| ribosomal protein S6 [Enterococcus faecalis TX0635]
gi|311287732|gb|EFQ66288.1| ribosomal protein S6 [Enterococcus faecalis DAPTO 516]
gi|311291667|gb|EFQ70223.1| ribosomal protein S6 [Enterococcus faecalis TX0470]
gi|315026671|gb|EFT38603.1| ribosomal protein S6 [Enterococcus faecalis TX2137]
gi|315030116|gb|EFT42048.1| ribosomal protein S6 [Enterococcus faecalis TX4000]
gi|315033550|gb|EFT45482.1| ribosomal protein S6 [Enterococcus faecalis TX0017]
gi|315036373|gb|EFT48305.1| ribosomal protein S6 [Enterococcus faecalis TX0027]
gi|315143589|gb|EFT87605.1| ribosomal protein S6 [Enterococcus faecalis TX2141]
gi|315148273|gb|EFT92289.1| ribosomal protein S6 [Enterococcus faecalis TX4244]
gi|315151297|gb|EFT95313.1| ribosomal protein S6 [Enterococcus faecalis TX0012]
gi|315153723|gb|EFT97739.1| ribosomal protein S6 [Enterococcus faecalis TX0031]
gi|315155117|gb|EFT99133.1| ribosomal protein S6 [Enterococcus faecalis TX0043]
gi|315158753|gb|EFU02770.1| ribosomal protein S6 [Enterococcus faecalis TX0312]
gi|315163337|gb|EFU07354.1| ribosomal protein S6 [Enterococcus faecalis TX0645]
gi|315165721|gb|EFU09738.1| ribosomal protein S6 [Enterococcus faecalis TX1302]
gi|315168226|gb|EFU12243.1| ribosomal protein S6 [Enterococcus faecalis TX1341]
gi|315170506|gb|EFU14523.1| ribosomal protein S6 [Enterococcus faecalis TX1342]
gi|315174176|gb|EFU18193.1| ribosomal protein S6 [Enterococcus faecalis TX1346]
gi|315573985|gb|EFU86176.1| ribosomal protein S6 [Enterococcus faecalis TX0309B]
gi|315578845|gb|EFU91036.1| ribosomal protein S6 [Enterococcus faecalis TX0630]
gi|315581936|gb|EFU94127.1| ribosomal protein S6 [Enterococcus faecalis TX0309A]
gi|323479246|gb|ADX78685.1| ribosomal protein S6 [Enterococcus faecalis 62]
gi|327533860|gb|AEA92694.1| 30S ribosomal protein S6 [Enterococcus faecalis OG1RF]
Length = 100
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + + ++ +++++NG EV + R +AY + R+ Y
Sbjct: 6 KYEIMYIIRPNIDEEAKTALVERFDTILKDNGAEVIESKDWEKRRLAYEMNGFREGIYHI 65
Query: 63 MNIASPPA--AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ SP AI+E R +I+++++R + + V++
Sbjct: 66 VNVTSPSTAGAINEFDRLAKINDDIIRHMIVKVEA 100
>gi|222153666|ref|YP_002562843.1| 30S ribosomal protein S6 [Streptococcus uberis 0140J]
gi|254765457|sp|B9DVK4|RS6_STRU0 RecName: Full=30S ribosomal protein S6
gi|222114479|emb|CAR43337.1| 30S ribosomal protein S6 [Streptococcus uberis 0140J]
Length = 96
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVSRFDSILTDNGATIVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ S A A++E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVESEDAVALNEFDRLAKINGDILRHMIVKLDA 96
>gi|325105011|ref|YP_004274665.1| SSU ribosomal protein S6P [Pedobacter saltans DSM 12145]
gi|324973859|gb|ADY52843.1| SSU ribosomal protein S6P [Pedobacter saltans DSM 12145]
Length = 121
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L +S + K+ I + ++ +NG E+ + G++ +AY I K YY
Sbjct: 1 MGQYETTIILTPLLSEEAAKEVIANFSKILTDNGAEIVQEDNWGLKKLAYPIEKKSTGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
I + + +++ DE V+R LT+ +D H + + + +
Sbjct: 61 HITEYKVSGEVIGKYELELKRDERVMRFLTVKLDKHAVAYNEKKRSGAFNKKKSEKAEAA 120
Query: 121 N 121
N
Sbjct: 121 N 121
>gi|189425663|ref|YP_001952840.1| 30S ribosomal protein S6 [Geobacter lovleyi SZ]
gi|226703472|sp|B3E6H3|RS6_GEOLS RecName: Full=30S ribosomal protein S6
gi|189421922|gb|ACD96320.1| ribosomal protein S6 [Geobacter lovleyi SZ]
Length = 122
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L+ D++ +K + Q ++ G+ +++ G R +AY IRK + Y
Sbjct: 1 MRKYETIFILQPDLAEDDVKSVTDKVQDVVASLKGDFHRLDDWGTRKLAYAIRKFPRGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQS 99
++ + E++R++R+DE VLR L++ + D E+
Sbjct: 61 YYLRFDGGAQLVAELERRLRLDEKVLRFLSVNITDEPEKK 100
>gi|24380220|ref|NP_722175.1| 30S ribosomal protein S6 [Streptococcus mutans UA159]
gi|290579805|ref|YP_003484197.1| 30S ribosomal protein S6 [Streptococcus mutans NN2025]
gi|32171545|sp|Q8DSD7|RS6_STRMU RecName: Full=30S ribosomal protein S6
gi|24378227|gb|AAN59481.1|AE015012_10 30S ribosomal protein S6 [Streptococcus mutans UA159]
gi|254996704|dbj|BAH87305.1| 30S ribosomal protein S6 [Streptococcus mutans NN2025]
Length = 96
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ +++ +NG + + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDAVLTDNGATIVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A A++E R +I+ ++LR + + +D+
Sbjct: 61 HVINVETEDAHALNEFDRLSKINNDILRHMIVKLDA 96
>gi|260101872|ref|ZP_05752109.1| 30S ribosomal protein S6 [Lactobacillus helveticus DSM 20075]
gi|260084300|gb|EEW68420.1| 30S ribosomal protein S6 [Lactobacillus helveticus DSM 20075]
Length = 98
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ D+ + K + Y +I +NGG + + G R AY+I K R+ Y
Sbjct: 5 KYEVTYIIKPDVDEESKKALVENYDKVIADNGGTMVESKDWGKRRFAYKIDKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + A++E R +ID +LRS+T+ +D
Sbjct: 65 MTFTADNADAVNEFGRLSKIDNMILRSMTVKLDK 98
>gi|116750609|ref|YP_847296.1| 30S ribosomal protein S6 [Syntrophobacter fumaroxidans MPOB]
gi|166227396|sp|A0LN59|RS6_SYNFM RecName: Full=30S ribosomal protein S6
gi|116699673|gb|ABK18861.1| SSU ribosomal protein S6P [Syntrophobacter fumaroxidans MPOB]
Length = 147
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ D+ + + +S++ NGG+V G + +AY ++K + Y
Sbjct: 1 MRKYETFFIIDPDLPDEVTAAVDEKIKSVVGANGGDVVSYVPWGKKKLAYPVKKRSRGLY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD---SHEQSPTLTIQ---RHDRDDRND 114
V M A + E++R MR+DE VL+ +T+ +D E+ D+ +
Sbjct: 61 VLMEYAGDSRLVAELERNMRLDERVLKFITVKLDDRYDPEKEAARMAANLPSFPEDEDTE 120
Query: 115 RFPRDRNVDRKQHVSEEK 132
++ + EE
Sbjct: 121 EKGSAPLAREEEGIGEEA 138
>gi|253581021|ref|ZP_04858282.1| 30S ribosomal protein S6 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847684|gb|EES75653.1| 30S ribosomal protein S6 [Ruminococcus sp. 5_1_39BFAA]
Length = 110
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + + I G + V E G + +AY I+K + +Y
Sbjct: 16 MNKYELALVVSAKVEDEVRDAVVEKAKGYITRYNGTITEVEEWGKKKLAYEIQKMHEGFY 75
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 76 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 110
>gi|239918785|ref|YP_002958343.1| SSU ribosomal protein S6P [Micrococcus luteus NCTC 2665]
gi|281414989|ref|ZP_06246731.1| 30S ribosomal protein S6 [Micrococcus luteus NCTC 2665]
gi|289706695|ref|ZP_06503043.1| ribosomal protein S6 [Micrococcus luteus SK58]
gi|259495339|sp|C5C7V1|RS6_MICLC RecName: Full=30S ribosomal protein S6
gi|239839992|gb|ACS31789.1| SSU ribosomal protein S6P [Micrococcus luteus NCTC 2665]
gi|289556615|gb|EFD49958.1| ribosomal protein S6 [Micrococcus luteus SK58]
Length = 101
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++ + ++ T+ +Y ++ GG V ++ G R AY I+K +A Y
Sbjct: 1 MRAYELMVLIDPEVDERTVEPTLKKYLEVVTNAGGTVDNIDVWGRRKTAYEIQKKSEAIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V +N S PAA E+ R + ++E +LR+ + + +
Sbjct: 61 VVVNFQSEPAATQELDRLLNLNETILRTKIIRPEEQK 97
>gi|116672662|ref|YP_833595.1| 30S ribosomal protein S6 [Arthrobacter sp. FB24]
gi|166226798|sp|A0K2H5|RS6_ARTS2 RecName: Full=30S ribosomal protein S6
gi|116612771|gb|ABK05495.1| SSU ribosomal protein S6P [Arthrobacter sp. FB24]
Length = 101
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 53/97 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYEIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P E+ R++ ++E ++R+ + +
Sbjct: 61 AVVNFTAKPDTAKELDRQLSLNETIMRTKITRPEEQK 97
>gi|284034857|ref|YP_003384788.1| 30S ribosomal protein S6 [Kribbella flavida DSM 17836]
gi|283814150|gb|ADB35989.1| ribosomal protein S6 [Kribbella flavida DSM 17836]
Length = 96
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 59/96 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ ++ QY +++++ GG V ++ G R +AY ++K + Y
Sbjct: 1 MRRYEVMVILDPELEERTVEPSLDQYLNIVRKEGGTVEKLDIWGRRKLAYDVKKKAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+++ + PA + E+ R++ ++E++LR+ + D H
Sbjct: 61 AVIDLTAEPAVVKELDRQLTLNESILRTKVIRPDQH 96
>gi|317968334|ref|ZP_07969724.1| 30S ribosomal protein S6 [Synechococcus sp. CB0205]
Length = 114
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR DI ++++ I +Y+ L+ E G EV G R +AY I K+++ YV +
Sbjct: 1 MYILRPDIPEEEVETHITKYRDLVTEAGAEVLDCQMRGKRRLAYTIAKHKEGIYVQLAHN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ +++ MR+ E+V+R LT+ D +P
Sbjct: 61 GDGQQVAALEKAMRLSEDVIRYLTVKQDGPLPAP 94
>gi|325662896|ref|ZP_08151465.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086620|ref|ZP_08335698.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470948|gb|EGC74177.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330410453|gb|EGG89885.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 95
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + I + + LI GG V V+E G + +AY I+K ++ YY
Sbjct: 1 MNKYELAVVVSAKVEDDVRAGVIEKVKELIARFGGNVTDVDEWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E++ +MRI ENV+R L + ++
Sbjct: 61 YFIHFESDSTVPAELESRMRIMENVIRFLCVKQEA 95
>gi|299541783|ref|ZP_07052106.1| 30S ribosomal protein S6 [Lysinibacillus fusiformis ZC1]
gi|298725521|gb|EFI66162.1| 30S ribosomal protein S6 [Lysinibacillus fusiformis ZC1]
Length = 95
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ ++ NG EV E G R +AY I+ R+ YY
Sbjct: 1 MRKYELMYIVRPNIEDEAKKALVERFNEMLTSNGAEVIESKEWGKRRLAYEIKDFREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + AI+E R I E+++R + + ++
Sbjct: 61 QIVKVNATSDAINEYTRLANISEDIIRHIAVREEA 95
>gi|314985955|gb|EFT30047.1| ribosomal protein S6 [Propionibacterium acnes HL005PA2]
Length = 96
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +Q+ + +Y +I + G V V+ G R AY I+K + Y
Sbjct: 1 MRKYEVMIIIDPTVEERQVDSLMEKYLKVITDEKGTVDNVDVWGKRRPAYDIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +N PA I E+ R + IDE ++R+ + + H
Sbjct: 61 VVVNATCEPATIQELDRLLAIDEKIMRTKVMRPEIH 96
>gi|126701291|ref|YP_001090188.1| 30S ribosomal protein S6 [Clostridium difficile 630]
gi|254977324|ref|ZP_05273796.1| 30S ribosomal protein S6 [Clostridium difficile QCD-66c26]
gi|255094655|ref|ZP_05324133.1| 30S ribosomal protein S6 [Clostridium difficile CIP 107932]
gi|255102881|ref|ZP_05331858.1| 30S ribosomal protein S6 [Clostridium difficile QCD-63q42]
gi|255308701|ref|ZP_05352872.1| 30S ribosomal protein S6 [Clostridium difficile ATCC 43255]
gi|255316408|ref|ZP_05357991.1| 30S ribosomal protein S6 [Clostridium difficile QCD-76w55]
gi|255519067|ref|ZP_05386743.1| 30S ribosomal protein S6 [Clostridium difficile QCD-97b34]
gi|255652251|ref|ZP_05399153.1| 30S ribosomal protein S6 [Clostridium difficile QCD-37x79]
gi|255657620|ref|ZP_05403029.1| 30S ribosomal protein S6 [Clostridium difficile QCD-23m63]
gi|260685205|ref|YP_003216490.1| 30S ribosomal protein S6 [Clostridium difficile CD196]
gi|260688864|ref|YP_003219998.1| 30S ribosomal protein S6 [Clostridium difficile R20291]
gi|296452699|ref|ZP_06894390.1| 30S ribosomal protein S6 [Clostridium difficile NAP08]
gi|296880047|ref|ZP_06904017.1| 30S ribosomal protein S6 [Clostridium difficile NAP07]
gi|306521966|ref|ZP_07408313.1| 30S ribosomal protein S6 [Clostridium difficile QCD-32g58]
gi|123066511|sp|Q181R5|RS6_CLOD6 RecName: Full=30S ribosomal protein S6
gi|115252728|emb|CAJ70572.1| 30S ribosomal protein S6 [Clostridium difficile]
gi|260211368|emb|CBA67011.1| 30S ribosomal protein S6 [Clostridium difficile CD196]
gi|260214881|emb|CBE07677.1| 30S ribosomal protein S6 [Clostridium difficile R20291]
gi|296258481|gb|EFH05385.1| 30S ribosomal protein S6 [Clostridium difficile NAP08]
gi|296429024|gb|EFH14901.1| 30S ribosomal protein S6 [Clostridium difficile NAP07]
Length = 92
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++++ + + + + + + ++ + GE+ V+ G + +AY I K + +Y
Sbjct: 1 MRNYELVYVVKPNSDEEVREAILNKVKEVVATD-GEIVKVDTWGTKKLAYPIAKFTEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V +N S E+ R ++I+ENV+R + +
Sbjct: 60 VLVNFKSAVDVPKEIDRNLKINENVIRHMIV 90
>gi|118579196|ref|YP_900446.1| 30S ribosomal protein S6 [Pelobacter propionicus DSM 2379]
gi|166227361|sp|A1AM18|RS6_PELPD RecName: Full=30S ribosomal protein S6
gi|118501906|gb|ABK98388.1| SSU ribosomal protein S6P [Pelobacter propionicus DSM 2379]
Length = 129
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 58/105 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L+ D+S IK + Q +I G+ + + + G+R +AY I K + Y
Sbjct: 1 MRKYETIYILQPDLSEDDIKVVADKVQDVITSYKGDFQRLEDWGIRKLAYPINKCARGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ 105
+++ I E++R++R+DE VLR ++ + + + P + +
Sbjct: 61 LYLRYDGGREMIAELERRLRLDEKVLRFQSVNITNQPEKPVVEKK 105
>gi|210613751|ref|ZP_03289865.1| hypothetical protein CLONEX_02072 [Clostridium nexile DSM 1787]
gi|210150960|gb|EEA81968.1| hypothetical protein CLONEX_02072 [Clostridium nexile DSM 1787]
Length = 95
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I TI + + LI GG V V+E G + +AY I+K ++ YY
Sbjct: 1 MNKYELAVVVNAKIEDDARTATIEKVKELIARFGGNVTDVDEWGKKRLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S EM+ ++RI +NVLR L + ++
Sbjct: 61 YFIHFESDATVPAEMEARLRIMDNVLRYLCVRQEA 95
>gi|50085515|ref|YP_047025.1| 30S ribosomal protein S6 [Acinetobacter sp. ADP1]
gi|61215532|sp|Q6F9R0|RS6_ACIAD RecName: Full=30S ribosomal protein S6
gi|49531491|emb|CAG69203.1| 30S ribosomal protein S6 [Acinetobacter sp. ADP1]
Length = 128
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R++ + + +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 N 121
Sbjct: 119 A 119
>gi|254994705|ref|ZP_05276895.1| 30S ribosomal protein S6 [Anaplasma marginale str. Mississippi]
gi|255002818|ref|ZP_05277782.1| 30S ribosomal protein S6 [Anaplasma marginale str. Puerto Rico]
gi|255003951|ref|ZP_05278752.1| 30S ribosomal protein S6 [Anaplasma marginale str. Virginia]
gi|91207900|sp|Q5PBN1|RS6_ANAMM RecName: Full=30S ribosomal protein S6
Length = 109
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 1 MPIYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
M I + PAA+ E +R++R++E+VLR L L VD + + +
Sbjct: 61 CMMYIRAEPAAMDEFRRRVRLNEDVLRFLCLKVDKVCEGKSAMM 104
>gi|170077069|ref|YP_001733707.1| ribosomal protein S6 [Synechococcus sp. PCC 7002]
gi|226695134|sp|B1XP08|RS6_SYNP2 RecName: Full=30S ribosomal protein S6
gi|169884738|gb|ACA98451.1| ribosomal protein S6 [Synechococcus sp. PCC 7002]
Length = 115
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 56/95 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR D+S +Q+++ +Y++++Q++G V G R +AY I+ Y+
Sbjct: 3 NNYEMMYILRPDLSEEQVQEVSSKYKTMLQDSGASDLQVQVRGKRHLAYPIQNFNDGIYI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N + + I ++R MR+ E V+R LT+ +D+
Sbjct: 63 QVNYKADGSQIKAVERDMRLGEMVIRYLTMKLDAE 97
>gi|323358003|ref|YP_004224399.1| ribosomal protein S6 [Microbacterium testaceum StLB037]
gi|323274374|dbj|BAJ74519.1| ribosomal protein S6 [Microbacterium testaceum StLB037]
Length = 130
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + + ++ +Q+ + + +I +GG + V+ G R +AY IRK + Y
Sbjct: 4 QYELMVIFDPEVDERQVAPKLDGFLKVITADGGTIDKVDIWGRRRLAYEIRKKNEGIYAV 63
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+N + A +E+ R+++++E ++R+ L + +R +
Sbjct: 64 VNFVATSEATNELDRQLKLNEQIMRTKVLRAEEAIAQVAAEAKRSEE 110
>gi|291548257|emb|CBL21365.1| SSU ribosomal protein S6P [Ruminococcus sp. SR1/5]
Length = 95
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + + I G + V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVSAKLEDEARDAVVEKAKGYITRYNGVITEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + ++
Sbjct: 61 YFIQFEADSQCPAEIERHVRIMDNVLRYLVVKKEA 95
>gi|257065995|ref|YP_003152251.1| 30S ribosomal protein S6 [Anaerococcus prevotii DSM 20548]
gi|256797875|gb|ACV28530.1| ribosomal protein S6 [Anaerococcus prevotii DSM 20548]
Length = 94
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ + + + +++ +I ++ GEV V++ G R +AY I ++ YY
Sbjct: 1 MNKYEAVLIFKADMADSERESLLDRFKDIIGQD-GEVTNVDDWGKRKLAYEINDLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ S P I E +R++R+ + V+R + + +
Sbjct: 60 YIVDFDSNPDHIKEFERRLRLSDFVIRYMVIRKE 93
>gi|227494165|ref|ZP_03924481.1| ribosomal protein S6 [Actinomyces coleocanis DSM 15436]
gi|226831899|gb|EEH64282.1| ribosomal protein S6 [Actinomyces coleocanis DSM 15436]
Length = 95
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + + + ++ + +L+ +NGG V V+ G R +AY I+K + Y
Sbjct: 1 MRAYELMVIFNPTVDERTVAPSMEKLLTLVTQNGGTVENVDVWGKRRLAYEIQKQSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E+V+R+ L ++
Sbjct: 61 VLVHMNTTPDVALEINRQLTLNESVMRTKLLRNEA 95
>gi|157149860|ref|YP_001451147.1| 30S ribosomal protein S6 [Streptococcus gordonii str. Challis
substr. CH1]
gi|189045592|sp|A8AZD7|RS6_STRGC RecName: Full=30S ribosomal protein S6
gi|157074654|gb|ABV09337.1| ribosomal protein S6 [Streptococcus gordonii str. Challis substr.
CH1]
gi|327458973|gb|EGF05321.1| 30S ribosomal protein S6 [Streptococcus sanguinis SK1057]
Length = 96
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKLDA 96
>gi|88607094|ref|YP_504775.1| 30S ribosomal protein S6 [Anaplasma phagocytophilum HZ]
gi|123495753|sp|Q2GLH6|RS6_ANAPZ RecName: Full=30S ribosomal protein S6
gi|88598157|gb|ABD43627.1| ribosomal protein S6 [Anaplasma phagocytophilum HZ]
Length = 109
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE F+ +Q ++ +++ +L+ + G E+ G+ Y I KN K +Y
Sbjct: 1 MPFYEFAFIAQQGLTQYELEGLSKGLTALLVKMGAELVKYEYWGLLDFVYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
M I + PAA+ E KRK++++E+VLR L L VD + + +
Sbjct: 61 CMMYIRAEPAAMDEFKRKVKLNEDVLRFLCLKVDKVPEGRSAMM 104
>gi|320531752|ref|ZP_08032681.1| ribosomal protein S6 [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136015|gb|EFW28034.1| ribosomal protein S6 [Actinomyces sp. oral taxon 171 str. F0337]
Length = 95
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E VLR+ L ++
Sbjct: 61 VVVDMTTTPEIAQELDRQLGLNETVLRTKLLRPEA 95
>gi|307151356|ref|YP_003886740.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 7822]
gi|306981584|gb|ADN13465.1| ribosomal protein S6 [Cyanothece sp. PCC 7822]
Length = 143
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D+ +Q++ I +Y+ + E+ E + LG R +AY I+K +YV M
Sbjct: 5 YEMMYIMRPDLLDEQVQQQINKYRDFLSEHKAEEIQIKNLGKRRLAYPIKKYTDGFYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV-----------DSHEQSPTLTIQRHDRDDR 112
N + ++R MR+ + V+R LT+ + D+ E + + +
Sbjct: 65 NYKGDGKQVAPIERAMRLSDEVIRYLTIKLRDEQVAAIAPTDAIEPAESPKLVETKPMAP 124
Query: 113 NDRFPRDRNVDRKQHVSEE 131
+ + P + + + +EE
Sbjct: 125 SPKPPVEEIPEADEISAEE 143
>gi|254422309|ref|ZP_05036027.1| ribosomal protein S6 [Synechococcus sp. PCC 7335]
gi|196189798|gb|EDX84762.1| ribosomal protein S6 [Synechococcus sp. PCC 7335]
Length = 112
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 55/93 (59%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR D+ + + D I +YQ+L+ E G E G R +AY I ++R+ Y+ MN
Sbjct: 1 MYILRPDLGDEAVDDAISRYQTLLSEGGAEDIETQHRGKRRLAYEINRHREGIYIQMNYE 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P + I M+R MR+ E+V+R LT++ + +
Sbjct: 61 APGSVIAPMERAMRLSEDVIRYLTIVFEEPAEG 93
>gi|262283525|ref|ZP_06061291.1| 30S ribosomal protein S6 [Streptococcus sp. 2_1_36FAA]
gi|262261016|gb|EEY79716.1| 30S ribosomal protein S6 [Streptococcus sp. 2_1_36FAA]
Length = 107
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 12 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 71
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 72 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 107
>gi|19554176|ref|NP_602178.1| 30S ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|62391830|ref|YP_227232.1| 30S ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|24212283|sp|Q8NLF9|RS6_CORGL RecName: Full=30S ribosomal protein S6
gi|21325756|dbj|BAC00377.1| Ribosomal protein S6 [Corynebacterium glutamicum ATCC 13032]
gi|41222977|emb|CAF18922.1| RIBOSOMAL PROTEIN S6 [Corynebacterium glutamicum ATCC 13032]
Length = 95
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 1 MRQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPIDKKEEGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 61 AVVDLKCESATVLELDRVLNLNDGVLRTKVLRLDK 95
>gi|24212294|sp|Q8RIE3|RS6_FUSNN RecName: Full=30S ribosomal protein S6
Length = 94
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ + Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREELVNQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 61 VLTTFEIDGTKLAEVESKLNIMESVMRYIVVKQD 94
>gi|332971413|gb|EGK10371.1| 30S ribosomal protein S6 [Desmospora sp. 8437]
Length = 97
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 53/94 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR ++ ++ +++ +I +NGGE + G R +AY I +R+ Y
Sbjct: 1 MHKYELMYILRPELDEEKSNANREKFRGIIADNGGESVEMEHFGKRRLAYLIDDHREGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++E++R++++D++V+R + + +D
Sbjct: 61 TVATFNGTVDTVNELERQLKLDDDVIRHMVINID 94
>gi|269959108|ref|YP_003328897.1| 30S ribosomal protein S6 [Anaplasma centrale str. Israel]
gi|269848939|gb|ACZ49583.1| 30S ribosomal protein S6 [Anaplasma centrale str. Israel]
Length = 109
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 1 MPIYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
M I + P+A+ E +RK+R++E+VLR L L VD + + +
Sbjct: 61 CMMYIRADPSAMDEFRRKVRLNEDVLRFLCLKVDKVCEGKSAMM 104
>gi|254303427|ref|ZP_04970785.1| ribosomal protein S6 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323619|gb|EDK88869.1| ribosomal protein S6 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 94
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ I Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREELINQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 61 VLTTFEIDGTKLAEVESKLNIMESVMRYIVVKQD 94
>gi|295106371|emb|CBL03914.1| SSU ribosomal protein S6P [Gordonibacter pamelaeae 7-10-1-b]
Length = 97
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + ++ I E G V V+ G R +AY I Y
Sbjct: 1 MKAYELLFFVAPSIDEESRAAVMKRIETTIAEGEGTVDNVDNWGKRKLAYEIDGLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + PA + E+ R +RI++ V+R + +
Sbjct: 61 TLIDFHADPANVAELDRVLRINDAVVRHMIVKR 93
>gi|213966492|ref|ZP_03394663.1| ribosomal protein S6 [Corynebacterium amycolatum SK46]
gi|213950858|gb|EEB62269.1| ribosomal protein S6 [Corynebacterium amycolatum SK46]
Length = 95
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ +Y ++++ G+V V+ G R +AY I K Y
Sbjct: 1 MRHYEVMIIIDPSQDERTVGPSLEKYLDVVRKENGKVEKVDIWGKRHLAYPIEKKEDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +++ A + E+ R++ +++++LR+ L VD
Sbjct: 61 VVVDLTCESATVLELDRRLNLNDSILRTKVLRVD 94
>gi|325965249|ref|YP_004243155.1| 30S ribosomal protein S6P [Arthrobacter phenanthrenivorans Sphe3]
gi|323471336|gb|ADX75021.1| SSU ribosomal protein S6P [Arthrobacter phenanthrenivorans Sphe3]
Length = 101
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 53/97 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYEIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P E+ R++ ++E ++R+ + +
Sbjct: 61 AVVNFTAKPETAKELDRQLSLNETIMRTKITRPEEQK 97
>gi|327438178|dbj|BAK14543.1| ribosomal protein S6 [Solibacillus silvestris StLB046]
Length = 96
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 51/94 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++Q ++ NG E+ + G R +AY I R+ +Y
Sbjct: 1 MRKYELMYIIRPNIEEEAKKALVERFQEILTSNGAEITEAKDWGKRRLAYEINDFREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + + AI+E R I E+++R + + +
Sbjct: 61 QIVKVNAGTEAINEYTRLANISEDIIRHIAVREE 94
>gi|308179154|ref|YP_003918560.1| 30S ribosomal protein S6 [Arthrobacter arilaitensis Re117]
gi|307746617|emb|CBT77589.1| 30S ribosomal protein S6 [Arthrobacter arilaitensis Re117]
Length = 98
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++ + ++ T+ +Y +++ NGG + V+ G R ++Y I+K +A Y
Sbjct: 1 MRAYELMVLIDPEVDDRTVEPTLEKYLEVVRSNGGTIDKVDIWGRRKMSYEIQKKAEATY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +N + PAA E++R+++I+E +LR +
Sbjct: 61 VVVNYTAEPAASAELERQLKINELILRHKVTRPEEA 96
>gi|320109097|ref|YP_004184687.1| 30S ribosomal protein S6 [Terriglobus saanensis SP1PR4]
gi|319927618|gb|ADV84693.1| ribosomal protein S6 [Terriglobus saanensis SP1PR4]
Length = 166
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 62/129 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R DI + + + +++ GGEV ++G R +AY +RK + ++
Sbjct: 3 RTYEVMYIVRPDIDEASLDALVEGFNAVVTNGGGEVTTAEKMGRRRLAYTVRKFQDGQFI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ I + + E++R++R+ E V++ +T+ D + + D + +
Sbjct: 63 LLTITADGKVVLELERRLRVTEQVIKFITVRTDEENKRLAKVKKHRDAHKKVSDQRAEVA 122
Query: 122 VDRKQHVSE 130
+ ++E
Sbjct: 123 PTPQASITE 131
>gi|83816197|ref|YP_445489.1| 30S ribosomal protein S6 [Salinibacter ruber DSM 13855]
gi|83757591|gb|ABC45704.1| 30S ribosomal protein S6 [Salinibacter ruber DSM 13855]
Length = 202
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++ + Q+ D + + LI+ N G+V V+E G + +AY I + R YYV
Sbjct: 81 QYELTYVISGVVKQNQVDDIVRKVNHLIESNDGDVLEVDEWGNQRLAYEIDRKRSGYYVN 140
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
M +P + ++R++ I+++VLR LTL +D+ ++RH + R
Sbjct: 141 MYFQAPGELVPRLERELDINDDVLRYLTLRMDA-------KMKRHYEQRKKRR 186
>gi|328943444|ref|ZP_08240909.1| 30S ribosomal protein S6 [Atopobium vaginae DSM 15829]
gi|327491413|gb|EGF23187.1| 30S ribosomal protein S6 [Atopobium vaginae DSM 15829]
Length = 113
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++ + + + + + ++ENGG + V + G +AY I K + Y
Sbjct: 18 KAYELLYFVSPSSTEEARDAVAKRIDTTVKENGGVIDNVEDWGKHKLAYEIDKLTEGDYT 77
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + P I E+ R +RI++ V+R + +
Sbjct: 78 LIDFHADPTQIAELNRVLRINDTVVRHMIVRR 109
>gi|221195094|ref|ZP_03568150.1| ribosomal protein S6 [Atopobium rimae ATCC 49626]
gi|221184997|gb|EEE17388.1| ribosomal protein S6 [Atopobium rimae ATCC 49626]
Length = 97
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + S + + + I GG+V V + G R +A+ I K + Y
Sbjct: 1 MKAYELLFFVDPSSSEEVRAGVMKRIDVAIAAEGGKVDNVEDWGKRKLAFEIDKLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+N + P I E+ R +RI++ V R + +
Sbjct: 61 TLINFHADPTQIAELDRVLRINDAVKRHMIVRR 93
>gi|118474517|ref|YP_892289.1| 30S ribosomal protein S6 [Campylobacter fetus subsp. fetus 82-40]
gi|166226815|sp|A0RQ06|RS6_CAMFF RecName: Full=30S ribosomal protein S6
gi|118413743|gb|ABK82163.1| ribosomal protein S6 [Campylobacter fetus subsp. fetus 82-40]
Length = 128
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ + K + + +I +NGGE+ V E+G R +AY+I K + Y
Sbjct: 1 MKHYELLFILKPTLTEDEAKVKVDFIKEVITKNGGEIASVIEMGTRKLAYKIDKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
V + +P I E+ R +RI E ++R LT+ ++ +
Sbjct: 61 VVIYFMAPTQLIAELVRNVRITEEIIRFLTVKYENKREISAW 102
>gi|270292430|ref|ZP_06198641.1| ribosomal protein S6 [Streptococcus sp. M143]
gi|293365828|ref|ZP_06612533.1| 30S ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|306829851|ref|ZP_07463038.1| 30S ribosomal protein S6 [Streptococcus mitis ATCC 6249]
gi|307703303|ref|ZP_07640248.1| ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|315613511|ref|ZP_07888418.1| 30S ribosomal protein S6 [Streptococcus sanguinis ATCC 49296]
gi|322375592|ref|ZP_08050104.1| ribosomal protein S6 [Streptococcus sp. C300]
gi|331266014|ref|YP_004325644.1| 30S ribosomal protein S6 [Streptococcus oralis Uo5]
gi|270278409|gb|EFA24255.1| ribosomal protein S6 [Streptococcus sp. M143]
gi|291315652|gb|EFE56100.1| 30S ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|304427862|gb|EFM30955.1| 30S ribosomal protein S6 [Streptococcus mitis ATCC 6249]
gi|307623169|gb|EFO02161.1| ribosomal protein S6 [Streptococcus oralis ATCC 35037]
gi|315314202|gb|EFU62247.1| 30S ribosomal protein S6 [Streptococcus sanguinis ATCC 49296]
gi|321279300|gb|EFX56341.1| ribosomal protein S6 [Streptococcus sp. C300]
gi|326682686|emb|CBZ00303.1| 30S ribosomal protein S6 [Streptococcus oralis Uo5]
Length = 96
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|225848302|ref|YP_002728465.1| ribosomal protein S6 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644537|gb|ACN99587.1| ribosomal protein S6 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 104
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ +S +++ + Q+LI+EN GE+ + + G R +AY I+K YY
Sbjct: 1 MRHYELVFVLKPTLSEEELNSRVEAIQNLIKENQGEIYNLEKWGRRNLAYPIQKFNSGYY 60
Query: 61 VFMNIASPPAAIHE-MKRKMRIDENVLRSLTLLVDSHEQS 99
+N + + ++ +RI E+V+R L + + E
Sbjct: 61 YLINYKTDNNKLAGILEYNLRITEDVIRFLNMKIHVKEDK 100
>gi|262372196|ref|ZP_06065475.1| ribosomal protein S6 [Acinetobacter junii SH205]
gi|262312221|gb|EEY93306.1| ribosomal protein S6 [Acinetobacter junii SH205]
Length = 127
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R++ + + +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
Q
Sbjct: 119 AQQAIQEAE 127
>gi|206901639|ref|YP_002251077.1| ribosomal protein S6 [Dictyoglomus thermophilum H-6-12]
gi|226703455|sp|B5YEW9|RS6_DICT6 RecName: Full=30S ribosomal protein S6
gi|206740742|gb|ACI19800.1| ribosomal protein S6 [Dictyoglomus thermophilum H-6-12]
Length = 97
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ ++S ++ K IQ GGEV+ V+ G RT+AY ++K + YY
Sbjct: 1 MRKYEIMCLMSPELSEEEFKTLYESIHQDIQSLGGEVQNVDVWGKRTLAYPVKKFTEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V MN P + E +R++++ E +LR + L++ E
Sbjct: 61 VVMNFLFPQNQLPEFERRLKLREKLLRYMITLLEKEE 97
>gi|227502170|ref|ZP_03932219.1| ribosomal protein S6 [Corynebacterium accolens ATCC 49725]
gi|306834727|ref|ZP_07467794.1| 30S ribosomal protein S6 [Corynebacterium accolens ATCC 49726]
gi|227076994|gb|EEI14957.1| ribosomal protein S6 [Corynebacterium accolens ATCC 49725]
gi|304569398|gb|EFM44896.1| 30S ribosomal protein S6 [Corynebacterium accolens ATCC 49726]
Length = 99
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 53/94 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + + ++ +Y +++++GG+V ++ G R +AY I K + Y
Sbjct: 5 RHYEVMIILDPNQDERTVTPSLDKYLDIVRKDGGKVENLDVWGKRRLAYPIEKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ ++ E+ R++ +++ +LR+ L DS
Sbjct: 65 VVNLECEHPSVSELDRRLNLNDTILRTKVLRTDS 98
>gi|302334829|ref|YP_003800036.1| SSU ribosomal protein S6P [Olsenella uli DSM 7084]
gi|301318669|gb|ADK67156.1| SSU ribosomal protein S6P [Olsenella uli DSM 7084]
Length = 97
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + + + + + + ENGG + V + G R +A+ I K + Y
Sbjct: 1 MKAYELLYFVDPACTEEVRAGVMKRIDVAVTENGGTIDNVEDWGKRKLAFEIDKLNEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + PA I E+ R +RI++ V R + +
Sbjct: 61 TLIDFHADPADIAELDRVLRINDAVKRHMVVRR 93
>gi|239907340|ref|YP_002954081.1| 30S ribosomal protein S6 [Desulfovibrio magneticus RS-1]
gi|259495331|sp|C4XGN7|RS6_DESMR RecName: Full=30S ribosomal protein S6
gi|239797206|dbj|BAH76195.1| 30S ribosomal protein S6 [Desulfovibrio magneticus RS-1]
Length = 102
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL ++++ ++ + + +++ G + V+E GM+ +AY ++K + +Y
Sbjct: 1 MRKYEALLLLSPELATDNRQEIVENLKGVLERQGTTMLSVDEWGMKDLAYPVQKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQS 99
A+P AI E +R +RI + V++ +T+ + D +
Sbjct: 61 TRFEFAAPATAIAEFERIVRITDGVMKFITVKLADKYVPE 100
>gi|221633231|ref|YP_002522456.1| 30S ribosomal protein S6 [Thermomicrobium roseum DSM 5159]
gi|221156055|gb|ACM05182.1| ribosomal protein S6 [Thermomicrobium roseum DSM 5159]
Length = 105
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVR---LVNELGMRTIAYRIRKNRKA 58
+ YE + LLR D++ +++ + + ++ + E GG + G R +AY I+K ++A
Sbjct: 9 RPYELMVLLRPDLADDRLEAALERIRNTVVEQGGTITFEKRDTPWGRRRLAYPIQKFQEA 68
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+YV + PP + E++R++R++E VLR L + +D
Sbjct: 69 FYVLFQLVCPPRTVREIERELRLNEQVLRHLMVRLDE 105
>gi|322386750|ref|ZP_08060374.1| 30S ribosomal protein S6 [Streptococcus cristatus ATCC 51100]
gi|321269032|gb|EFX51968.1| 30S ribosomal protein S6 [Streptococcus cristatus ATCC 51100]
Length = 96
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEGAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKLDA 96
>gi|153816339|ref|ZP_01969007.1| hypothetical protein RUMTOR_02591 [Ruminococcus torques ATCC
27756]
gi|317502278|ref|ZP_07960449.1| ribosomal protein S6 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089021|ref|ZP_08337928.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846300|gb|EDK23218.1| hypothetical protein RUMTOR_02591 [Ruminococcus torques ATCC
27756]
gi|316896323|gb|EFV18423.1| ribosomal protein S6 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330406473|gb|EGG85986.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + I + ++LI GG V V+E G R AY I+K + +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARANVIEKVKALITRFGGNVTDVDEWGKRRFAYEIQKMTEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ + E+++++RI +NVLR L + ++
Sbjct: 61 YFVHFEAESTVPGEVEQRIRIMDNVLRYLCVKQEA 95
>gi|291548587|emb|CBL24849.1| SSU ribosomal protein S6P [Ruminococcus torques L2-14]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + I + +++I GG V V+E G R AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARAEVIEKVKAMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ + E+++++RI +NVLR L + ++
Sbjct: 61 YFIHFEAESTVPAEVEQRIRIMDNVLRYLCVKQEA 95
>gi|323485449|ref|ZP_08090797.1| hypothetical protein HMPREF9474_02548 [Clostridium symbiosum
WAL-14163]
gi|323401312|gb|EGA93662.1| hypothetical protein HMPREF9474_02548 [Clostridium symbiosum
WAL-14163]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDEERAAAIEKVTGYITRFGGTVVDIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFESDSVCPNEVEAHIRIMEPVIRYLCVRQDA 95
>gi|152992024|ref|YP_001357745.1| 30S ribosomal protein S6 [Sulfurovum sp. NBC37-1]
gi|166227395|sp|A6Q7C9|RS6_SULNB RecName: Full=30S ribosomal protein S6
gi|151423885|dbj|BAF71388.1| 30S ribosomal protein S6 [Sulfurovum sp. NBC37-1]
Length = 127
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 64/126 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ ++ ++ I + + ++ + E+ +++GMR +AY ++KN + YY
Sbjct: 1 MNCYETLFVVKPTLTEEETAAEIAKIKDVLAKVDAELLATDDMGMRKLAYPVQKNDRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + AI E++R ++I+E V++ LT+ +++ + D P +
Sbjct: 61 TVLFYKANGEAIAEIERNLKINEEVIKFLTVKYVKNKEIAQFDKLVAAANKSKDAEPAEP 120
Query: 121 NVDRKQ 126
+ +
Sbjct: 121 KAETTE 126
>gi|22537853|ref|NP_688704.1| 30S ribosomal protein S6 [Streptococcus agalactiae 2603V/R]
gi|25011798|ref|NP_736193.1| 30S ribosomal protein S6 [Streptococcus agalactiae NEM316]
gi|76788641|ref|YP_330323.1| 30S ribosomal protein S6 [Streptococcus agalactiae A909]
gi|76798958|ref|ZP_00781159.1| ribosomal protein S6 [Streptococcus agalactiae 18RS21]
gi|77406980|ref|ZP_00783996.1| ribosomal protein S6 [Streptococcus agalactiae H36B]
gi|77412640|ref|ZP_00788916.1| ribosomal protein S6 [Streptococcus agalactiae CJB111]
gi|77413667|ref|ZP_00789851.1| ribosomal protein S6 [Streptococcus agalactiae 515]
gi|54039534|sp|P66598|RS6_STRA5 RecName: Full=30S ribosomal protein S6
gi|54041977|sp|P66597|RS6_STRA3 RecName: Full=30S ribosomal protein S6
gi|91207793|sp|Q3JZI0|RS6_STRA1 RecName: Full=30S ribosomal protein S6
gi|22534748|gb|AAN00577.1|AE014269_21 ribosomal protein S6 [Streptococcus agalactiae 2603V/R]
gi|24413339|emb|CAD47418.1| 30S ribosomal protein S6 [Streptococcus agalactiae NEM316]
gi|76563698|gb|ABA46282.1| ribosomal protein S6 [Streptococcus agalactiae A909]
gi|76585679|gb|EAO62236.1| ribosomal protein S6 [Streptococcus agalactiae 18RS21]
gi|77160267|gb|EAO71394.1| ribosomal protein S6 [Streptococcus agalactiae 515]
gi|77161312|gb|EAO72347.1| ribosomal protein S6 [Streptococcus agalactiae CJB111]
gi|77174404|gb|EAO77257.1| ribosomal protein S6 [Streptococcus agalactiae H36B]
gi|319745680|gb|EFV97979.1| 30S ribosomal protein S6 [Streptococcus agalactiae ATCC 13813]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ + Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILSDNGATVVESKDWEKRRLAYEIQDFTEGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+N+ + A A++E R +I+ ++LR + + VD
Sbjct: 61 HIVNVEAEDAVALNEFDRLSKINGDILRHMIVKVD 95
>gi|323487704|ref|ZP_08092962.1| 30S ribosomal protein S6 [Planococcus donghaensis MPA1U2]
gi|323398438|gb|EGA91226.1| 30S ribosomal protein S6 [Planococcus donghaensis MPA1U2]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++++ I + K + ++ ++ NG E+ E G R +AY I R+ +Y
Sbjct: 1 MREYELMYIIQPAIEEEAKKALVERFNDILTTNGAEIIESKEWGKRRLAYEINDLREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + AI+E R I+E+++R + + D+
Sbjct: 61 QIVKVNAGSEAINEYTRLANINEDIIRHIAVRKDA 95
>gi|283798278|ref|ZP_06347431.1| ribosomal protein S6 [Clostridium sp. M62/1]
gi|291074057|gb|EFE11421.1| ribosomal protein S6 [Clostridium sp. M62/1]
gi|295090605|emb|CBK76712.1| SSU ribosomal protein S6P [Clostridium cf. saccharolyticum K10]
gi|295115693|emb|CBL36540.1| SSU ribosomal protein S6P [butyrate-producing bacterium SM4/1]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + + I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSMKLEDEERAAAIEKVKGYITRFGGTVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIQFESDSVCPNEVEAHVRIMEPVIRYLCVRQDA 95
>gi|167747440|ref|ZP_02419567.1| hypothetical protein ANACAC_02160 [Anaerostipes caccae DSM 14662]
gi|317471169|ref|ZP_07930540.1| ribosomal protein S6 [Anaerostipes sp. 3_2_56FAA]
gi|167652802|gb|EDR96931.1| hypothetical protein ANACAC_02160 [Anaerostipes caccae DSM 14662]
gi|316901384|gb|EFV23327.1| ribosomal protein S6 [Anaerostipes sp. 3_2_56FAA]
Length = 113
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + +++I E G E+ V+E G + +AY I+K ++ YY
Sbjct: 19 MSKYELALVVNAKIEDEARAEVVEKAKAMITEAGAEITNVDEWGKKRLAYEIQKMKEGYY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + ++ K+RI ENVLR L + D+
Sbjct: 79 YFIQFDAETEVPAVLEEKLRITENVLRYLVVKQDA 113
>gi|166030695|ref|ZP_02233524.1| hypothetical protein DORFOR_00369 [Dorea formicigenerans ATCC
27755]
gi|166029487|gb|EDR48244.1| hypothetical protein DORFOR_00369 [Dorea formicigenerans ATCC
27755]
Length = 139
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 45 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGKISDVDESGKKRLAYEIQKMKEAYY 104
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ + E+++++RI +NV+R L + ++
Sbjct: 105 YFIHFDAEADVPGEIEQRIRIMDNVIRYLCVRQEA 139
>gi|225850829|ref|YP_002731063.1| ribosomal protein S6 [Persephonella marina EX-H1]
gi|225646735|gb|ACO04921.1| ribosomal protein S6 [Persephonella marina EX-H1]
Length = 115
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+L+ ++ ++I + QSLI NGGE+ + G + +AY I+ YY
Sbjct: 1 MRYYELVFVLKPTLTEEEISSKVESVQSLITSNGGEIYNFEKWGRKELAYPIQNFNSGYY 60
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+N + +++ +R+DE+V+R L ++ ++ + +
Sbjct: 61 FIINFKTENYELPSKLEYNLRLDEDVIRFLAFKTKPPKKEEVKEETSAEKVEAAE 115
>gi|226952677|ref|ZP_03823141.1| 30S ribosomal protein S6 [Acinetobacter sp. ATCC 27244]
gi|294649991|ref|ZP_06727379.1| 30S ribosomal protein S6 [Acinetobacter haemolyticus ATCC 19194]
gi|226836583|gb|EEH68966.1| 30S ribosomal protein S6 [Acinetobacter sp. ATCC 27244]
gi|292824084|gb|EFF82899.1| 30S ribosomal protein S6 [Acinetobacter haemolyticus ATCC 19194]
Length = 127
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V L+ D S Q+ + +Y S I+E G++ + + G R +AY I K KA+Y
Sbjct: 1 MRHYEIVLLVHPD-QSDQVVGMVERYISQIKEAEGQIHRLEDWGRRQLAYPINKIHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ MN+ + E++ R ++ ++R++ + + +L + + + R + R+
Sbjct: 60 ILMNVECGQTTLDELEELFRYNDAIIRNIIIRREHAITEESL-LAKSAEEKRARKAQREE 118
Query: 121 NVDRKQHVS 129
Q
Sbjct: 119 AQQAVQEAE 127
>gi|332685542|ref|YP_004455316.1| 30S ribosomal protein S6p [Melissococcus plutonius ATCC 35311]
gi|332369551|dbj|BAK20507.1| SSU ribosomal protein S6p [Melissococcus plutonius ATCC 35311]
Length = 102
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 1 MKL---YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK 57
M YE ++++R +I + I ++ S++++NG + + R +AY ++ +
Sbjct: 3 MNKDTNYEVMYIIRPNIDEEAKAALIERFDSILKDNGATISESKDWEKRRLAYEMKGYHE 62
Query: 58 AYYVFMNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y +N+ASP AI+E R +I+++++R + + +++
Sbjct: 63 GIYHIVNVASPSSANAINEFDRLAKINDDIIRHMIIKLEA 102
>gi|260888677|ref|ZP_05899940.1| ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|330839914|ref|YP_004414494.1| 30S ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|260861609|gb|EEX76109.1| ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
gi|329747678|gb|AEC01035.1| 30S ribosomal protein S6 [Selenomonas sputigena ATCC 35185]
Length = 112
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+++ + + I ++ LIQ NGG + + G + + Y I+ YY
Sbjct: 1 MRKYEVIFIVKP-MEEEATNAVIEKFVKLIQTNGGMIDKEDRWGKKRLVYEIKDYTDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + PA + E R M+I +++L+ + + +
Sbjct: 60 CLLNVTAEPACMKECDRVMKITDDLLKHMIVRAEE 94
>gi|257057876|ref|YP_003135708.1| 30S ribosomal protein S6P [Saccharomonospora viridis DSM 43017]
gi|256587748|gb|ACU98881.1| SSU ribosomal protein S6P [Saccharomonospora viridis DSM 43017]
Length = 111
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 49/92 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + + T+ + +I+ +GG V V+ G R +AY I K+ + Y
Sbjct: 3 RHYEIMVILDPSLDERTVAPTLENFLQVIRSSGGTVEKVDVWGRRRLAYDIGKHSEGIYA 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + + P A+ E+ R++ + E V+R+ +
Sbjct: 63 VLELYAEPEAVSELDRQLSLQETVMRTKVIRR 94
>gi|116782633|gb|ABK22584.1| unknown [Picea sitchensis]
Length = 289
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++L+ +D + + +++ + + + ++E G++ +N+ GMR +AY+I K +KA Y+
Sbjct: 135 RHYEIMYLIHEDNADE-VQEVVSKVKDFVEEKKGKIWRLNDWGMRRLAYKIEKAKKANYI 193
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
MNI I+++K DE V+R L +
Sbjct: 194 LMNIEMGAEHINDLKTLFDKDERVIRHLVMKQKKAITE 231
>gi|220914624|ref|YP_002489933.1| 30S ribosomal protein S6 [Arthrobacter chlorophenolicus A6]
gi|254765217|sp|B8H841|RS6_ARTCA RecName: Full=30S ribosomal protein S6
gi|219861502|gb|ACL41844.1| ribosomal protein S6 [Arthrobacter chlorophenolicus A6]
Length = 101
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 53/97 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ ++ ++I +GG + V+ G R +AY I+K + Y
Sbjct: 1 MRPYELMVIIDPEVEERTVEPSLQKFLNVITNDGGTIEKVDIWGRRRLAYDIKKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P E+ R++ ++E ++R+ + +
Sbjct: 61 AVVNFTAKPETAKELDRQLSLNETIMRTKITRPEEQK 97
>gi|328956359|ref|YP_004373692.1| SSU ribosomal protein S6P [Coriobacterium glomerans PW2]
gi|328456683|gb|AEB07877.1| SSU ribosomal protein S6P [Coriobacterium glomerans PW2]
Length = 97
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + I + G+V V E G R +AY I K + Y
Sbjct: 1 MKAYELLFFVDPALDVESRAAVMKRIDVAIADGSGKVDNVEEWGKRKLAYEINKLIEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P I E+ R +R+ + V R + + D E
Sbjct: 61 TLINFHADPTQIAELDRVLRVTDAVQRHMIVRRDDQE 97
>gi|162447063|ref|YP_001620195.1| 30S ribosomal protein S6 [Acholeplasma laidlawii PG-8A]
gi|189045451|sp|A9NEN9|RS6_ACHLI RecName: Full=30S ribosomal protein S6
gi|161985170|gb|ABX80819.1| small subunit ribosomal protein S6 [Acholeplasma laidlawii PG-8A]
Length = 95
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 57/92 (61%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++ + +++K + ++I NGG V + E+G++ +AY I K+RK YY
Sbjct: 1 MRKYELMYIANPQLDPEKLKGLVANLSNVITSNGGSVLSLKEIGLKDLAYEINKHRKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V+M + + P AI E KR + I E+V+R++ +
Sbjct: 61 VWMLVEASPEAIAEYKRVVNITESVIRNIEVK 92
>gi|184201985|ref|YP_001856192.1| 30S ribosomal protein S6 [Kocuria rhizophila DC2201]
gi|226703478|sp|B2GJD8|RS6_KOCRD RecName: Full=30S ribosomal protein S6
gi|183582215|dbj|BAG30686.1| 30S ribosomal protein S6 [Kocuria rhizophila DC2201]
Length = 101
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 51/97 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L ++ + ++ T+ ++ ++ + G V ++ G R +AY I+K + Y
Sbjct: 1 MREYELMVILNPEVEERAVEPTLKKFLEVVTKENGTVDKLDIWGRRRLAYEIQKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+N + P E+ R + ++E V+R+ + + +
Sbjct: 61 AVVNFTAEPQTAKELDRVLSLNEAVMRTKIIRPEEQK 97
>gi|257470799|ref|ZP_05634889.1| SSU ribosomal protein S6P [Fusobacterium ulcerans ATCC 49185]
gi|317065003|ref|ZP_07929488.1| SSU ribosomal protein S6P [Fusobacterium ulcerans ATCC 49185]
gi|313690679|gb|EFS27514.1| SSU ribosomal protein S6P [Fusobacterium ulcerans ATCC 49185]
Length = 94
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ I + + + ++ G V + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIINPTILEEGRDAVVEKVTGILTAAGATVAKSEKWGERKLAYPIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + ++ K+ I E V+R + + D
Sbjct: 61 VLATFDIDGTQLSAVEGKLNITEEVIRYIIVKQD 94
>gi|284049976|ref|ZP_06380186.1| 30S ribosomal protein S6 [Arthrospira platensis str. Paraca]
gi|291568137|dbj|BAI90409.1| 30S ribosomal protein S6 [Arthrospira platensis NIES-39]
Length = 116
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ I +YQ ++ E+G + V LG R +AY I K+R+ Y+ M
Sbjct: 6 YETMYILRSDLNDEQVEAAIAKYQDILHEHGAQNLDVQNLGKRRLAYDIDKHREGIYIQM 65
Query: 64 NIA-SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N I M+R MRI +V+R LT+ D
Sbjct: 66 NYEGGDSNQIKVMERAMRIGGDVIRYLTIKQD 97
>gi|295100598|emb|CBK98143.1| SSU ribosomal protein S6P [Faecalibacterium prausnitzii L2-6]
Length = 94
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + IG+++SLI+ N G + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEASSALIGKFKSLIEAN-GTIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P+ E+ R +I E V+RSL + +
Sbjct: 60 TVINFTADPSFPAELDRVYKITEGVMRSLIVAHEE 94
>gi|227506313|ref|ZP_03936362.1| ribosomal protein S6 [Corynebacterium striatum ATCC 6940]
gi|227197125|gb|EEI77173.1| ribosomal protein S6 [Corynebacterium striatum ATCC 6940]
Length = 99
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 54/94 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + + ++ ++ +++++GG+V V+ G R +AY I K + Y
Sbjct: 5 RHYEVMIILDPNQDERTVSPSLDKFLEVVRKDGGKVENVDVWGKRRLAYAIDKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A++ E+ R++ +++ +LR+ L DS
Sbjct: 65 VVNLECESASVLELDRRLNLNDTILRTKVLRTDS 98
>gi|298492977|ref|YP_003723154.1| 30S ribosomal protein S6 ['Nostoc azollae' 0708]
gi|298234895|gb|ADI66031.1| ribosomal protein S6 ['Nostoc azollae' 0708]
Length = 108
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+ +Q++ + +YQ+L+ E G + + G R +AY I ++R Y+
Sbjct: 5 YETMYILRPDLGDEQVEQAVAKYQNLLTEQGAQNIEIQNRGKRRLAYEINRHRDGIYIQF 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
N + AI ++R MR+ E V+R +T
Sbjct: 65 NYTALATAITPVERAMRLSEEVIRYMTTKQ 94
>gi|307543250|gb|ADN44265.1| ribosomal protein S6 [Pseudomonas syringae]
Length = 78
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKM 79
V +N+ A+ E++
Sbjct: 60 VMLNVECTGKALAELEDNY 78
>gi|153855509|ref|ZP_01996628.1| hypothetical protein DORLON_02642 [Dorea longicatena DSM 13814]
gi|149752031|gb|EDM61962.1| hypothetical protein DORLON_02642 [Dorea longicatena DSM 13814]
Length = 95
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 1 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGQISDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E+++++RI +NV+R L + D+
Sbjct: 61 YFIHFESDAETPSEIEQRIRIMDNVIRFLCVRQDA 95
>gi|260905001|ref|ZP_05913323.1| ribosomal protein S6 [Brevibacterium linens BL2]
Length = 96
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + DT+ + ++ G V V+ G R AY I+K + +Y
Sbjct: 1 MRHYELMLILDNETDERTLADTVDKLMKVVPAENGTVDNVDIWGRRRFAYDIQKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V ++ + PA E+ R++ ++E+VLR+ L D+
Sbjct: 61 VVVDFHAEPATTKELDRQLGLNESVLRTKILRPDA 95
>gi|259508442|ref|ZP_05751342.1| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
gi|259163996|gb|EEW48550.1| 30S ribosomal protein S6 [Corynebacterium efficiens YS-314]
Length = 98
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 50/94 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 5 RQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 65 VIDLKCESATVLELDRVLNLNDGVLRTKVLRLDK 98
>gi|259047891|ref|ZP_05738292.1| 30S ribosomal protein S6 [Granulicatella adiacens ATCC 49175]
gi|259035568|gb|EEW36823.1| 30S ribosomal protein S6 [Granulicatella adiacens ATCC 49175]
Length = 99
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + + ++ +++ +NG V + R AY I+ ++ Y
Sbjct: 6 KYEILYIIRPNIDEAAKAELVARFDAVLTDNGAVVVESKDWAKRRFAYEIKDFQEGIYHL 65
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+NI + AAI E R +I+ ++LR + + +++
Sbjct: 66 VNITAEDAAAIDEFDRLAKINNDILRHMIVKLEA 99
>gi|296131517|ref|YP_003638767.1| ribosomal protein S6 [Cellulomonas flavigena DSM 20109]
gi|296023332|gb|ADG76568.1| ribosomal protein S6 [Cellulomonas flavigena DSM 20109]
Length = 97
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 53/93 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L +I + + ++ +Y S+++ +GG V V+ G R +AY I+K + Y
Sbjct: 4 RQYEIMIILDPEIEERTVAPSLDKYLSVVKTDGGTVDKVDVWGRRRLAYDIKKKAEGIYA 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + PA E+ R++ ++E VLR+ L +
Sbjct: 64 VVDFTASPATAKELDRQLGLNEVVLRTKVLRRE 96
>gi|307706200|ref|ZP_07643017.1| ribosomal protein S6 [Streptococcus mitis SK321]
gi|307618390|gb|EFN97540.1| ribosomal protein S6 [Streptococcus mitis SK321]
Length = 96
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKTDA 96
>gi|313906074|ref|ZP_07839426.1| ribosomal protein S6 [Eubacterium cellulosolvens 6]
gi|313469119|gb|EFR64469.1| ribosomal protein S6 [Eubacterium cellulosolvens 6]
Length = 96
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + + + + + I G + V++ G + +AY I R+ +Y
Sbjct: 1 MHNYELALVLSAKLDDESRAAKLEKAKGYITRYNGTIGNVDDWGKKKLAYEIEHEREGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + P A E++R +RI ++VLR L + D+
Sbjct: 61 YFIPFEADPTAPAEIERHVRIMDDVLRYLIIRTDAE 96
>gi|146321680|ref|YP_001201391.1| 30S ribosomal protein S6 [Streptococcus suis 98HAH33]
gi|253752499|ref|YP_003025640.1| 30S ribosomal protein S6 [Streptococcus suis SC84]
gi|253754325|ref|YP_003027466.1| 30S ribosomal protein S6 [Streptococcus suis P1/7]
gi|253756259|ref|YP_003029399.1| 30S ribosomal protein S6 [Streptococcus suis BM407]
gi|330833441|ref|YP_004402266.1| 30S ribosomal protein S6 [Streptococcus suis ST3]
gi|166227393|sp|A4W3Q2|RS6_STRS2 RecName: Full=30S ribosomal protein S6
gi|145692486|gb|ABP92991.1| Ribosomal protein S6 [Streptococcus suis 98HAH33]
gi|251816788|emb|CAZ52431.1| 30S ribosomal protein S6 [Streptococcus suis SC84]
gi|251818723|emb|CAZ56559.1| 30S ribosomal protein S6 [Streptococcus suis BM407]
gi|251820571|emb|CAR47327.1| 30S ribosomal protein S6 [Streptococcus suis P1/7]
gi|292559105|gb|ADE32106.1| Ribosomal protein S6 [Streptococcus suis GZ1]
gi|319758907|gb|ADV70849.1| 30S ribosomal protein S6 [Streptococcus suis JS14]
gi|329307664|gb|AEB82080.1| 30S ribosomal protein S6 [Streptococcus suis ST3]
Length = 96
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA 96
>gi|323695063|ref|ZP_08109206.1| ribosomal protein S6 [Clostridium symbiosum WAL-14673]
gi|323500865|gb|EGB16784.1| ribosomal protein S6 [Clostridium symbiosum WAL-14673]
Length = 95
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + ++ I + I GG V ++E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDEERAAAIEKVTGYITRFGGTVADIDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFESDSVCPNEVEAHIRIMEPVIRYLCVRQDA 95
>gi|19704978|ref|NP_602473.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329233|ref|ZP_06871734.1| 30S ribosomal protein S6 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19712882|gb|AAL93772.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296153589|gb|EFG94406.1| 30S ribosomal protein S6 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 105
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ + Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREELVNQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 72 VLTTFEIDGTKLAEVESKLNIMESVMRYIVVKQD 105
>gi|307705991|ref|ZP_07642814.1| ribosomal protein S6 [Streptococcus mitis SK564]
gi|307708376|ref|ZP_07644843.1| ribosomal protein S6 [Streptococcus mitis NCTC 12261]
gi|322377028|ref|ZP_08051521.1| ribosomal protein S6 [Streptococcus sp. M334]
gi|307615822|gb|EFN95028.1| ribosomal protein S6 [Streptococcus mitis NCTC 12261]
gi|307620410|gb|EFN99523.1| ribosomal protein S6 [Streptococcus mitis SK564]
gi|321282835|gb|EFX59842.1| ribosomal protein S6 [Streptococcus sp. M334]
Length = 96
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKTDA 96
>gi|228930480|ref|ZP_04093480.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936754|ref|ZP_04099545.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229199604|ref|ZP_04326264.1| 30S ribosomal protein S6 [Bacillus cereus m1293]
gi|228583878|gb|EEK42036.1| 30S ribosomal protein S6 [Bacillus cereus m1293]
gi|228822963|gb|EEM68804.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829199|gb|EEM74836.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 90
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 49/89 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ AI+E R +I+E++LR + + +
Sbjct: 61 ANAEAINEFDRLAKINEDILRHIVVKEEE 89
>gi|309798593|ref|ZP_07692868.1| ribosomal protein S6 [Streptococcus infantis SK1302]
gi|308117829|gb|EFO55230.1| ribosomal protein S6 [Streptococcus infantis SK1302]
Length = 96
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKLDA 96
>gi|227496645|ref|ZP_03926921.1| ribosomal protein S6 [Actinomyces urogenitalis DSM 15434]
gi|226833840|gb|EEH66223.1| ribosomal protein S6 [Actinomyces urogenitalis DSM 15434]
Length = 95
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILEPETDERTVAASLEKLLQVVPSNGGTVDKVDVWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +++ + P E+ R++ ++E VLR+ L ++
Sbjct: 61 IVVDMTTTPEIAQELDRQLGLNETVLRTKLLRPEA 95
>gi|34763884|ref|ZP_00144788.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237742687|ref|ZP_04573168.1| SSU ribosomal protein S6P [Fusobacterium sp. 4_1_13]
gi|256846082|ref|ZP_05551540.1| ribosomal protein S6 [Fusobacterium sp. 3_1_36A2]
gi|294784788|ref|ZP_06750076.1| ribosomal protein S6 [Fusobacterium sp. 3_1_27]
gi|27886347|gb|EAA23618.1| SSU ribosomal protein S6P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430335|gb|EEO40547.1| SSU ribosomal protein S6P [Fusobacterium sp. 4_1_13]
gi|256719641|gb|EEU33196.1| ribosomal protein S6 [Fusobacterium sp. 3_1_36A2]
gi|294486502|gb|EFG33864.1| ribosomal protein S6 [Fusobacterium sp. 3_1_27]
Length = 105
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++ I Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREELINQVNALLTSNGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 72 VLTTFEIDGTKLAEVESKLNIMESVMRYIVVKQD 105
>gi|225574301|ref|ZP_03782911.1| hypothetical protein RUMHYD_02366 [Blautia hydrogenotrophica DSM
10507]
gi|225038523|gb|EEG48769.1| hypothetical protein RUMHYD_02366 [Blautia hydrogenotrophica DSM
10507]
Length = 95
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + I G + V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKVEDDVRAAVVEKAKGYITRYNGNITEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADADCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|325066295|ref|ZP_08124968.1| ribosomal protein S6 [Actinomyces oris K20]
gi|326772817|ref|ZP_08232101.1| ribosomal protein S6 [Actinomyces viscosus C505]
gi|326637449|gb|EGE38351.1| ribosomal protein S6 [Actinomyces viscosus C505]
Length = 95
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + T+ + ++ NGG V V+ G R +AY I+K + +Y
Sbjct: 1 MRHYEIMIILDPETDERTANATLEKLLQVVPSNGGTVDKVDIWGKRRLAYDIKKKSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ + P E+ R++ ++E VLR+ L ++
Sbjct: 61 AVVDMTTTPEIAQELDRQLGLNETVLRTKLLRPEA 95
>gi|23494664|dbj|BAC19630.1| putative 30S ribosomal protein S6 [Corynebacterium efficiens
YS-314]
Length = 99
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 50/94 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 6 RQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPINKKEEGIYA 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 66 VIDLKCESATVLELDRVLNLNDGVLRTKVLRLDK 99
>gi|38201090|emb|CAE50814.1| 30S ribosomal protein S6 [Corynebacterium diphtheriae]
Length = 98
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 48/94 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + Y
Sbjct: 5 RHYEVMIILDPSQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E+ R + ++++V+R+ L D
Sbjct: 65 VVNLTCESATVLELDRVLNLNDSVMRTKVLRGDK 98
>gi|306824867|ref|ZP_07458211.1| 30S ribosomal protein S6 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304433078|gb|EFM36050.1| 30S ribosomal protein S6 [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 96
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I+ ++LR + + + +
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKLGA 96
>gi|16330273|ref|NP_441001.1| 30S ribosomal protein S6 [Synechocystis sp. PCC 6803]
gi|2500413|sp|P73636|RS6_SYNY3 RecName: Full=30S ribosomal protein S6
gi|1652762|dbj|BAA17681.1| 30S ribosomal protein S6 [Synechocystis sp. PCC 6803]
Length = 113
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + +LR D++ +++ + +YQ + N E V G R +AY+IR+ YV
Sbjct: 4 NSYELMVILRPDLNEERVSQEVTKYQEFLTNNAAEEVSVKVWGKRRLAYQIRRFNDGIYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
N I ++R MR+++NV+R L++ +
Sbjct: 64 LFNFNGEGQQIALIERDMRLNDNVMRFLSIKL 95
>gi|229825618|ref|ZP_04451687.1| hypothetical protein GCWU000182_00980 [Abiotrophia defectiva ATCC
49176]
gi|229790181|gb|EEP26295.1| hypothetical protein GCWU000182_00980 [Abiotrophia defectiva ATCC
49176]
Length = 95
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + L+ GG + V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVNAKIEDEARNKVLEDVKGLVTRFGGTITDVEEWGKKKLAYEIQKMSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ + A E++ ++RI ENVLR L + ++
Sbjct: 61 YFIHFEAESTAPGEIESRIRIMENVLRFLCVKQEA 95
>gi|257439410|ref|ZP_05615165.1| ribosomal protein S6 [Faecalibacterium prausnitzii A2-165]
gi|257198069|gb|EEU96353.1| ribosomal protein S6 [Faecalibacterium prausnitzii A2-165]
Length = 94
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G++++LI EN G + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEATAALVGKFKTLI-ENNGTIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N S P+ E+ R +I E V+RSL + +
Sbjct: 60 TVINFTSEPSFPAELDRVYKITEGVMRSLIVAHEE 94
>gi|15901385|ref|NP_345989.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TIGR4]
gi|15903439|ref|NP_358989.1| 30S ribosomal protein S6 [Streptococcus pneumoniae R6]
gi|111658384|ref|ZP_01409071.1| hypothetical protein SpneT_02000463 [Streptococcus pneumoniae
TIGR4]
gi|116516740|ref|YP_816830.1| 30S ribosomal protein S6 [Streptococcus pneumoniae D39]
gi|148984889|ref|ZP_01818142.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP3-BS71]
gi|148992569|ref|ZP_01822237.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP9-BS68]
gi|148997395|ref|ZP_01825000.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP11-BS70]
gi|149003237|ref|ZP_01828133.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS69]
gi|149007546|ref|ZP_01831181.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP18-BS74]
gi|149011779|ref|ZP_01832975.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP19-BS75]
gi|149021815|ref|ZP_01835822.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP23-BS72]
gi|168488797|ref|ZP_02712996.1| ribosomal protein S6 [Streptococcus pneumoniae SP195]
gi|168491567|ref|ZP_02715710.1| ribosomal protein S6 [Streptococcus pneumoniae CDC0288-04]
gi|168493442|ref|ZP_02717585.1| ribosomal protein S6 [Streptococcus pneumoniae CDC3059-06]
gi|168575263|ref|ZP_02721226.1| ribosomal protein S6 [Streptococcus pneumoniae MLV-016]
gi|169833108|ref|YP_001694946.1| 30S ribosomal protein S6 [Streptococcus pneumoniae Hungary19A-6]
gi|182684497|ref|YP_001836244.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CGSP14]
gi|221232252|ref|YP_002511405.1| 30S ribosomal protein S6 [Streptococcus pneumoniae ATCC 700669]
gi|225854981|ref|YP_002736493.1| 30S ribosomal protein S6 [Streptococcus pneumoniae JJA]
gi|225857167|ref|YP_002738678.1| 30S ribosomal protein S6 [Streptococcus pneumoniae P1031]
gi|225859296|ref|YP_002740806.1| 30S ribosomal protein S6 [Streptococcus pneumoniae 70585]
gi|225861372|ref|YP_002742881.1| 30S ribosomal protein S6 [Streptococcus pneumoniae Taiwan19F-14]
gi|237650223|ref|ZP_04524475.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CCRI 1974]
gi|237820894|ref|ZP_04596739.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CCRI 1974M2]
gi|298230726|ref|ZP_06964407.1| 30S ribosomal protein S6 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254953|ref|ZP_06978539.1| 30S ribosomal protein S6 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503277|ref|YP_003725217.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TCH8431/19A]
gi|303255327|ref|ZP_07341397.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS455]
gi|303260168|ref|ZP_07346140.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP-BS293]
gi|303262558|ref|ZP_07348499.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS292]
gi|303264960|ref|ZP_07350875.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS397]
gi|303266423|ref|ZP_07352311.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS457]
gi|303269401|ref|ZP_07355171.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS458]
gi|307068185|ref|YP_003877151.1| hypothetical protein SPAP_1563 [Streptococcus pneumoniae AP200]
gi|307127749|ref|YP_003879780.1| 30S ribosomal protein S6 [Streptococcus pneumoniae 670-6B]
gi|54039537|sp|P66603|RS6_STRR6 RecName: Full=30S ribosomal protein S6
gi|54041979|sp|P66602|RS6_STRPN RecName: Full=30S ribosomal protein S6
gi|122278324|sp|Q04JK8|RS6_STRP2 RecName: Full=30S ribosomal protein S6
gi|226695290|sp|B1ICW1|RS6_STRPI RecName: Full=30S ribosomal protein S6
gi|226695291|sp|B2IR60|RS6_STRPS RecName: Full=30S ribosomal protein S6
gi|254765455|sp|C1C8D0|RS6_STRP7 RecName: Full=30S ribosomal protein S6
gi|254765456|sp|B8ZLE1|RS6_STRPJ RecName: Full=30S ribosomal protein S6
gi|254765458|sp|C1CFC2|RS6_STRZJ RecName: Full=30S ribosomal protein S6
gi|254765459|sp|C1CLP0|RS6_STRZP RecName: Full=30S ribosomal protein S6
gi|254765460|sp|C1CSF9|RS6_STRZT RecName: Full=30S ribosomal protein S6
gi|14973031|gb|AAK75629.1| ribosomal protein S6 [Streptococcus pneumoniae TIGR4]
gi|15459047|gb|AAL00200.1| 30S Ribosomal protein S6 (S6) [Streptococcus pneumoniae R6]
gi|116077316|gb|ABJ55036.1| ribosomal protein S6 [Streptococcus pneumoniae D39]
gi|147756450|gb|EDK63491.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP11-BS70]
gi|147758697|gb|EDK65694.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS69]
gi|147760905|gb|EDK67875.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP18-BS74]
gi|147764210|gb|EDK71142.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP19-BS75]
gi|147922911|gb|EDK74027.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP3-BS71]
gi|147928586|gb|EDK79600.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP9-BS68]
gi|147930051|gb|EDK81038.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP23-BS72]
gi|168995610|gb|ACA36222.1| ribosomal protein S6 [Streptococcus pneumoniae Hungary19A-6]
gi|182629831|gb|ACB90779.1| 30S ribosomal protein S6 [Streptococcus pneumoniae CGSP14]
gi|183572796|gb|EDT93324.1| ribosomal protein S6 [Streptococcus pneumoniae SP195]
gi|183574214|gb|EDT94742.1| ribosomal protein S6 [Streptococcus pneumoniae CDC0288-04]
gi|183576305|gb|EDT96833.1| ribosomal protein S6 [Streptococcus pneumoniae CDC3059-06]
gi|183578693|gb|EDT99221.1| ribosomal protein S6 [Streptococcus pneumoniae MLV-016]
gi|220674713|emb|CAR69286.1| 30S ribosomal protein S6 [Streptococcus pneumoniae ATCC 700669]
gi|225720251|gb|ACO16105.1| ribosomal protein S6 [Streptococcus pneumoniae 70585]
gi|225722450|gb|ACO18303.1| ribosomal protein S6 [Streptococcus pneumoniae JJA]
gi|225725200|gb|ACO21052.1| ribosomal protein S6 [Streptococcus pneumoniae P1031]
gi|225726938|gb|ACO22789.1| ribosomal protein S6 [Streptococcus pneumoniae Taiwan19F-14]
gi|298238872|gb|ADI70003.1| 30S ribosomal protein S6 [Streptococcus pneumoniae TCH8431/19A]
gi|301794550|emb|CBW36994.1| 30S ribosomal protein S6 [Streptococcus pneumoniae INV104]
gi|301800374|emb|CBW33005.1| 30S ribosomal protein S6 [Streptococcus pneumoniae OXC141]
gi|301802259|emb|CBW35011.1| 30S ribosomal protein S6 [Streptococcus pneumoniae INV200]
gi|302597695|gb|EFL64771.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS455]
gi|302636275|gb|EFL66769.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP14-BS292]
gi|302638665|gb|EFL69128.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP-BS293]
gi|302641069|gb|EFL71446.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS458]
gi|302644001|gb|EFL74260.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS457]
gi|302645479|gb|EFL75711.1| 30S ribosomal protein S6 [Streptococcus pneumoniae BS397]
gi|306409722|gb|ADM85149.1| hypothetical protein SPAP_1563 [Streptococcus pneumoniae AP200]
gi|306484811|gb|ADM91680.1| ribosomal protein S6 [Streptococcus pneumoniae 670-6B]
gi|327389727|gb|EGE88072.1| ribosomal protein S6 [Streptococcus pneumoniae GA04375]
gi|332072334|gb|EGI82817.1| ribosomal protein S6 [Streptococcus pneumoniae GA17570]
gi|332073879|gb|EGI84357.1| ribosomal protein S6 [Streptococcus pneumoniae GA41301]
gi|332074296|gb|EGI84773.1| ribosomal protein S6 [Streptococcus pneumoniae GA17545]
gi|332199586|gb|EGJ13661.1| ribosomal protein S6 [Streptococcus pneumoniae GA41317]
gi|332200103|gb|EGJ14176.1| ribosomal protein S6 [Streptococcus pneumoniae GA47368]
gi|332200982|gb|EGJ15053.1| ribosomal protein S6 [Streptococcus pneumoniae GA47901]
Length = 96
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|289450775|ref|YP_003475643.1| 30S ribosomal protein S6 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185322|gb|ADC91747.1| ribosomal protein S6 [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 94
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V++L + + + Q+L+ G V V E G R +AY IR ++ +Y
Sbjct: 1 MNKYELVYVLSTTQGDEAVAAASEKVQALVASK-GTVTNVEEWGRRKLAYEIRDEKEGFY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N + A +E+ R ++I+E+VLR L + D
Sbjct: 60 VVVNFEAAADAPYEIDRILKINEDVLRYLLIRKD 93
>gi|254499289|ref|ZP_05111963.1| 30S ribosomal protein S6 [Legionella drancourtii LLAP12]
gi|254351486|gb|EET10347.1| 30S ribosomal protein S6 [Legionella drancourtii LLAP12]
Length = 106
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+FL+ D S+Q+ + +Y+ +I ++ G + +LG R +AY I KA+Y MNI
Sbjct: 1 MFLVHPD-QSEQVPAMVERYEGIISKHSGLIHRKEDLGRRQLAYPINDVHKAHYYLMNIE 59
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
A+ E+K + ++ +LR+L + + ++ +++
Sbjct: 60 CSLEALEEIKNAFKFNDAILRNLITVQKQAITTESVLMKKEKE 102
>gi|308235862|ref|ZP_07666599.1| 30S ribosomal protein S6 [Gardnerella vaginalis ATCC 14018]
Length = 98
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSVDGTDYWGRRKLAYEIDGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + PA E+ R + ++E+V+R+ L D+
Sbjct: 65 VNYTAEPALSDELDRVLNLNESVVRTKILRKDA 97
>gi|148988587|ref|ZP_01820020.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP6-BS73]
gi|147925788|gb|EDK76863.1| 30S ribosomal protein S6 [Streptococcus pneumoniae SP6-BS73]
Length = 96
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVKANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|148274147|ref|YP_001223708.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|170783387|ref|YP_001711721.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
sepedonicus]
gi|147832077|emb|CAN03050.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|169157957|emb|CAQ03167.1| 30S ribosomal protein S6 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 154
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1 MKL-YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE + +L +I + + ++ ++ ++I+ +GG V V+ G R +AY I K +
Sbjct: 1 MTHQYELMVILDPEIDERTVAPSLDKFLNVIRTSGGTVDNVDVWGRRRLAYEINKKNEGI 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
Y + + + A E+ R++ + E V+R+ L +
Sbjct: 61 YAVVQLTATSEATQELDRQLGLSEAVMRTKVLRAEEA 97
>gi|307704414|ref|ZP_07641326.1| ribosomal protein S6 [Streptococcus mitis SK597]
gi|307622027|gb|EFO01052.1| ribosomal protein S6 [Streptococcus mitis SK597]
Length = 96
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|283782808|ref|YP_003373562.1| ribosomal protein S6 [Gardnerella vaginalis 409-05]
gi|283441046|gb|ADB13512.1| ribosomal protein S6 [Gardnerella vaginalis 409-05]
Length = 98
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ +K QY L+ GG V + G R AY I + YV
Sbjct: 5 KYELMFIANPELDEHGLKKLTEQYLELVTNEGGSVDGTDYWGRRKFAYEIEGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P+ E+ R + ++E+V+R+ L D+
Sbjct: 65 VNYTAEPSVSDELDRVLNLNESVIRTKILRKDA 97
>gi|257058628|ref|YP_003136516.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 8802]
gi|256588794|gb|ACU99680.1| ribosomal protein S6 [Cyanothece sp. PCC 8802]
Length = 124
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR +S +Q+ + +Y+ + + + V G R +AY I++ YV M
Sbjct: 5 YEMIYILRPSLSEEQVNQEVNKYRDFLNDYNVKDLQVKIWGKRRLAYPIKRFIDGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
N + ++R MR+ E V+R +TL V++
Sbjct: 65 NYQGEGNQVAPLERAMRLSEEVIRYMTLKVETAVSE 100
>gi|313900384|ref|ZP_07833878.1| ribosomal protein S6 [Clostridium sp. HGF2]
gi|312954933|gb|EFR36607.1| ribosomal protein S6 [Clostridium sp. HGF2]
Length = 97
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + + +I ++ G + V+E G++ AY I +K YY
Sbjct: 1 MKKYEIMYIVNASLDDAARTKLMDSFHKIITDHEGTIDKVDEWGVKEFAYEINHMKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V +N + IHE +R RI+ +++R + + E
Sbjct: 61 VVVNATANNEGIHEFERLARINHSIVRYMIIKTQDEE 97
>gi|256381017|ref|YP_003104677.1| ribosomal protein S6 [Actinosynnema mirum DSM 43827]
gi|255925320|gb|ACU40831.1| ribosomal protein S6 [Actinosynnema mirum DSM 43827]
Length = 118
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 52/94 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + + ++ + ++I+ GG V V+ G R +++ I K+ + Y
Sbjct: 4 MRHYEVMVILDPSLDERTVAPSLDTFLNVIRTAGGNVEKVDVWGKRRLSFEINKSAEGIY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ S P A+ E+ R++ + E VLR+ L +
Sbjct: 64 AVLDLLSTPEAVKELDRQLGLQETVLRTKVLRRE 97
>gi|261414897|ref|YP_003248580.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371353|gb|ACX74098.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327117|gb|ADL26318.1| ribosomal protein S6 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 123
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ IS IK + + I GE+ ++ G R +AY I K + YY
Sbjct: 1 MRQYETMVIIDAMISDDAIKAEVETIAANITNGNGEILRRDDWGKRKLAYTINKRQHGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V + + + M+ ++++ENVLR +TL
Sbjct: 61 VIFYYKAEASVVANMEAALKLNENVLRWMTL 91
>gi|330978938|gb|EGH77997.1| 30S ribosomal protein S6 [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 86
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +FL+ D S+Q+ + +Y LI+E+GG++ + + G R +AY I KA+Y
Sbjct: 1 MRHYEIIFLVHPD-QSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKM 79
V +N+ ++ E + ++
Sbjct: 60 VMLNVECTGKSLAEREEQL 78
>gi|222054668|ref|YP_002537030.1| ribosomal protein S6 [Geobacter sp. FRC-32]
gi|254765439|sp|B9M5U8|RS6_GEOSF RecName: Full=30S ribosomal protein S6
gi|221563957|gb|ACM19929.1| ribosomal protein S6 [Geobacter sp. FRC-32]
Length = 128
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 56/96 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++YE +F+++ D+ +++K + Q +I GE++ + + G R +AY I K + Y
Sbjct: 1 MRMYETIFIVQPDLGEEELKGISARVQEVIVSMKGELKRLEDWGARKLAYPIEKFNRGRY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++ A I E++R++R+++ ++R ++ ++
Sbjct: 61 YYLRFDGDAALIAELERRLRLNDKIIRYQSVKLEKE 96
>gi|325479873|gb|EGC82958.1| ribosomal protein S6 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 94
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ ++ + +++ +I ++ GEV V++ G R +AY I + YY
Sbjct: 1 MNKYEAVLIFKADMNDSDRENLLDRFKEIIGQD-GEVTNVDDWGKRKLAYEINDLKDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ S P I E +R++R+ ++++R + + +
Sbjct: 60 YIVDFDSNPDHIKEFERRLRLSDSIIRYMVIRKE 93
>gi|282891670|ref|ZP_06300157.1| hypothetical protein pah_c188o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498460|gb|EFB40792.1| hypothetical protein pah_c188o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 114
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 56/93 (60%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++++ +S + K + + Q+ I E+GGE+ V++ G R +AY+I +R+ YY
Sbjct: 8 LYEGMYVISATLSDEARKKALEKIQNGITEHGGEILKVHDQGRRRLAYQIDGHREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + PAAI E+ ++E+++R +TL D
Sbjct: 68 LYFSVDPAAISELWHDYHLNEDLIRFITLRTDK 100
>gi|253581413|ref|ZP_04858639.1| SSU ribosomal protein S6P [Fusobacterium varium ATCC 27725]
gi|251836777|gb|EES65311.1| SSU ribosomal protein S6P [Fusobacterium varium ATCC 27725]
Length = 94
Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ I + + + ++ G V + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIINPTILEEGRDAVVEKVTGILTAAGATVAKSEKWGERKLAYPIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + ++ K+ I E V+R + + D
Sbjct: 61 VLATFDIDGTQLSAVEGKLNITEEVMRYIIVKQD 94
>gi|56416479|ref|YP_153553.1| 30S ribosomal protein S6 [Anaplasma marginale str. St. Maries]
gi|222474848|ref|YP_002563263.1| 30S ribosomal protein S6 (rpsF) [Anaplasma marginale str. Florida]
gi|56387711|gb|AAV86298.1| 30S ribosomal protein S6 [Anaplasma marginale str. St. Maries]
gi|222418984|gb|ACM49007.1| 30S ribosomal protein S6 (rpsF) [Anaplasma marginale str. Florida]
Length = 127
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+YE F+ +Q ++ +++ +L+ + G E+ G+ AY I KN K +Y
Sbjct: 20 PIYEFAFIAQQGLTQYELEGLSKGLSALLVKIGAELVKYEYWGLLDFAYSIAKNNKGHYC 79
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
M I + PAA+ E +R++R++E+VLR L L VD + + +
Sbjct: 80 MMYIRAEPAAMDEFRRRVRLNEDVLRFLCLKVDKVCEGKSAMM 122
>gi|291521976|emb|CBK80269.1| SSU ribosomal protein S6P [Coprococcus catus GD/7]
Length = 95
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L I ++ +I + + +I GG V V+E G + +AY I+K ++ +Y
Sbjct: 1 MNKYELAVVLTTKIEDEERAASIEKIKEVIARFGGVVTNVDEWGKKRLAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S +E+++++RI ENV+R L + D+
Sbjct: 61 YFITFESDSNCPNEVEQRVRIMENVIRYLCIRQDA 95
>gi|159904384|ref|YP_001551728.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9211]
gi|226695114|sp|A9BDR2|RS6_PROM4 RecName: Full=30S ribosomal protein S6
gi|159889560|gb|ABX09774.1| 30S ribosomal protein S6 [Prochlorococcus marinus str. MIT 9211]
Length = 172
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++LR I ++ + +Y +++ GGEV G R +AY I K+++ YV
Sbjct: 5 PYYETMYILRPTIPEDEVDSHLKKYTEILESAGGEVLDSQMRGKRRLAYPIGKHKEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
++ I +++ MR+ E+V+R LT+ D P + ++N + ++
Sbjct: 65 QLSHQGDGQHIAVLEKAMRLTEDVIRYLTVKQD----GPLPAKRVVKTSEKNVKEDKE-- 118
Query: 122 VDRKQHVSEEK 132
V+ K+ +E+K
Sbjct: 119 VENKETTTEDK 129
>gi|296111017|ref|YP_003621398.1| ribosomal protein S6 [Leuconostoc kimchii IMSNU 11154]
gi|295832548|gb|ADG40429.1| ribosomal protein S6 [Leuconostoc kimchii IMSNU 11154]
Length = 98
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ S K + ++ ++ NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLESDAKKALVERFDGILTNNGATITKSADWATRRFAYEIAGYREGVYHII 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVDSH 96
N + AI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDNAINEFDRLAKISQDILRHMIVKRDAE 98
>gi|227500386|ref|ZP_03930448.1| ribosomal protein S6 [Anaerococcus tetradius ATCC 35098]
gi|227217449|gb|EEI82768.1| ribosomal protein S6 [Anaerococcus tetradius ATCC 35098]
Length = 94
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + D++ + +++ +I +N GEV V++ G R +AY I ++ YY
Sbjct: 1 MNKYEAVLIFKADMADSDRIALLDRFKEIIGQN-GEVTSVDDWGRRKLAYEINDLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ S P I E +R++R+ + ++R + + +
Sbjct: 60 YIVDFNSNPDHIREFERRLRLSDFIIRYMVIRKE 93
>gi|289168356|ref|YP_003446625.1| 30S ribosomal protein S6 [Streptococcus mitis B6]
gi|288907923|emb|CBJ22763.1| 30S ribosomal protein S6 [Streptococcus mitis B6]
Length = 96
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKSWEKRRLAYEIKDFREGLY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVNVEANDDVALKEFDRLSKINADILRHMIVKIDA 96
>gi|168013078|ref|XP_001759228.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689541|gb|EDQ75912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +FL+ + + +++ D I + ++ + E G++ VN+ G+R +AY+I+KN +A YV
Sbjct: 114 RHYEIMFLV-PESNLEKVPDVIKKVEAFVAEQKGKIWRVNDWGVRRLAYKIKKNERANYV 172
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
MNI AI+E+ DE V+R + + T+
Sbjct: 173 LMNIEMKAEAINELNSLFEKDERVIRHMCISQKQAFTEDTV 213
>gi|330718018|ref|ZP_08312618.1| ribosomal protein S6 [Leuconostoc fallax KCTC 3537]
Length = 98
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ +G + + R AY I R+ Y +
Sbjct: 5 YELTYIVRPDLEADAKKALVERFDGILTTDGATITKSADWATRRFAYEIDGYREGTYHVI 64
Query: 64 NIASPP-AAIHEMKRKMRIDENVLRSLTLLVDSH 96
N + AI+E R +I +++LR + + D+
Sbjct: 65 NFNADNDDAINEFDRLAKISQDILRHMVVKRDAE 98
>gi|254413827|ref|ZP_05027596.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
gi|196179424|gb|EDX74419.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
Length = 109
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D+S +Q+ + +Y+ L+QE GGE + G R +AY I ++R+ Y+ M
Sbjct: 5 YEMMYILRPDMSEEQVNQAVTKYKDLLQEQGGEEIEIQHRGKRRLAYPIERHREGVYIQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLL 92
N +PP + +++R MR + V+R LTL
Sbjct: 65 NYKAPPIHVAQLQRAMRYGDEVIRYLTLK 93
>gi|71083408|ref|YP_266127.1| 30S ribosomal protein S6 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762169|ref|ZP_01264134.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1002]
gi|91207928|sp|Q4FMR5|RS6_PELUB RecName: Full=30S ribosomal protein S6
gi|71062521|gb|AAZ21524.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1062]
gi|91717971|gb|EAS84621.1| ribosomal protein S6 [Candidatus Pelagibacter ubique HTCC1002]
Length = 121
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQD S Q+K +Y ++++N GE+ + G+ +AY I+KN+K Y
Sbjct: 1 MNLYEHTIVARQDTSPAQVKQLTEKYSKIVEKNEGEIVQTEDWGLLNLAYIIKKNKKGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I P I E+++ ID+N+LR +T+ V
Sbjct: 61 MHFKIKGPGKIIDELEKNEAIDKNLLRYMTVKVKK 95
>gi|225378674|ref|ZP_03755895.1| hypothetical protein ROSEINA2194_04344 [Roseburia inulinivorans
DSM 16841]
gi|225209511|gb|EEG91865.1| hypothetical protein ROSEINA2194_04344 [Roseburia inulinivorans
DSM 16841]
Length = 96
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG V V + G + +AY I+K + YY
Sbjct: 1 MNKYELALVVSAKIEDDARTATVEKAKDYIVRAGGTVTEVEDWGKKKLAYDIQKMSEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI +NVLR L + D
Sbjct: 61 YFIQFEAEATVPAAVEQDVRIMDNVLRFLCVRKDEA 96
>gi|16802092|ref|NP_463577.1| 30S ribosomal protein S6 [Listeria monocytogenes EGD-e]
gi|46906275|ref|YP_012664.1| 30S ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47092169|ref|ZP_00229961.1| ribosomal protein S6 [Listeria monocytogenes str. 4b H7858]
gi|47095112|ref|ZP_00232724.1| ribosomal protein S6 [Listeria monocytogenes str. 1/2a F6854]
gi|217965897|ref|YP_002351575.1| ribosomal protein S6 [Listeria monocytogenes HCC23]
gi|224498258|ref|ZP_03666607.1| 30S ribosomal protein S6 [Listeria monocytogenes Finland 1988]
gi|224503031|ref|ZP_03671338.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL R2-561]
gi|226222689|ref|YP_002756796.1| ribosomal protein S6 [Listeria monocytogenes Clip81459]
gi|254824727|ref|ZP_05229728.1| ribosomal protein S6 [Listeria monocytogenes FSL J1-194]
gi|254827475|ref|ZP_05232162.1| ribosomal protein S6 [Listeria monocytogenes FSL N3-165]
gi|254830663|ref|ZP_05235318.1| 30S ribosomal protein S6 [Listeria monocytogenes 10403S]
gi|254851790|ref|ZP_05241138.1| ribosomal protein S6 [Listeria monocytogenes FSL R2-503]
gi|254899635|ref|ZP_05259559.1| 30S ribosomal protein S6 [Listeria monocytogenes J0161]
gi|254913162|ref|ZP_05263174.1| ribosomal protein S6 [Listeria monocytogenes J2818]
gi|254930817|ref|ZP_05264176.1| ribosomal protein S6 [Listeria monocytogenes HPB2262]
gi|254937543|ref|ZP_05269240.1| ribosomal protein S6 [Listeria monocytogenes F6900]
gi|254992266|ref|ZP_05274456.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J2-064]
gi|255022437|ref|ZP_05294423.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J1-208]
gi|255028629|ref|ZP_05300580.1| 30S ribosomal protein S6 [Listeria monocytogenes LO28]
gi|255519955|ref|ZP_05387192.1| 30S ribosomal protein S6 [Listeria monocytogenes FSL J1-175]
gi|284803215|ref|YP_003415080.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5578]
gi|284996356|ref|YP_003418124.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5923]
gi|290892372|ref|ZP_06555367.1| ribosomal protein S6 [Listeria monocytogenes FSL J2-071]
gi|300765694|ref|ZP_07075671.1| ribosomal protein S6 [Listeria monocytogenes FSL N1-017]
gi|24212308|sp|Q8YAR9|RS6_LISMO RecName: Full=30S ribosomal protein S6
gi|61215608|sp|Q725C0|RS6_LISMF RecName: Full=30S ribosomal protein S6
gi|254765442|sp|B8DAM2|RS6_LISMH RecName: Full=30S ribosomal protein S6
gi|259495338|sp|C1KV85|RS6_LISMC RecName: Full=30S ribosomal protein S6
gi|16409403|emb|CAC98259.1| ribosomal protein S6 [Listeria monocytogenes EGD-e]
gi|46879539|gb|AAT02841.1| ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016457|gb|EAL07378.1| ribosomal protein S6 [Listeria monocytogenes str. 1/2a F6854]
gi|47019371|gb|EAL10112.1| ribosomal protein S6 [Listeria monocytogenes str. 4b H7858]
gi|217335167|gb|ACK40961.1| ribosomal protein S6 [Listeria monocytogenes HCC23]
gi|225875151|emb|CAS03843.1| ribosomal protein S6 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599852|gb|EEW13177.1| ribosomal protein S6 [Listeria monocytogenes FSL N3-165]
gi|258605083|gb|EEW17691.1| ribosomal protein S6 [Listeria monocytogenes FSL R2-503]
gi|258610144|gb|EEW22752.1| ribosomal protein S6 [Listeria monocytogenes F6900]
gi|284058777|gb|ADB69718.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5578]
gi|284061823|gb|ADB72762.1| 30S ribosomal protein S6 [Listeria monocytogenes 08-5923]
gi|290558198|gb|EFD91717.1| ribosomal protein S6 [Listeria monocytogenes FSL J2-071]
gi|293582359|gb|EFF94391.1| ribosomal protein S6 [Listeria monocytogenes HPB2262]
gi|293591163|gb|EFF99497.1| ribosomal protein S6 [Listeria monocytogenes J2818]
gi|293593966|gb|EFG01727.1| ribosomal protein S6 [Listeria monocytogenes FSL J1-194]
gi|300513567|gb|EFK40637.1| ribosomal protein S6 [Listeria monocytogenes FSL N1-017]
gi|307569560|emb|CAR82739.1| rpsF [Listeria monocytogenes L99]
gi|313611734|gb|EFR86269.1| ribosomal protein S6 [Listeria monocytogenes FSL F2-208]
gi|328468372|gb|EGF39378.1| 30S ribosomal protein S6 [Listeria monocytogenes 1816]
gi|328476180|gb|EGF46886.1| 30S ribosomal protein S6 [Listeria monocytogenes 220]
gi|332310390|gb|EGJ23485.1| 30S ribosomal protein S6 [Listeria monocytogenes str. Scott A]
Length = 97
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R +I + K + ++ ++ ENG E+ E G R +AY I R +Y
Sbjct: 3 RKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYH 62
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + +I+E R +I ++++R + + ++
Sbjct: 63 IVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA 97
>gi|237736138|ref|ZP_04566619.1| SSU ribosomal protein S6P [Fusobacterium mortiferum ATCC 9817]
gi|229421691|gb|EEO36738.1| SSU ribosomal protein S6P [Fusobacterium mortiferum ATCC 9817]
Length = 94
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F++ I + I + ++ G ++ + G R +AY I K + +Y
Sbjct: 1 MKKYEIMFIINPTILEEGRDAVIEKVTGVLTAAGANIQKSEKWGERKLAYPIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + +++ K+ I E VLR + + D
Sbjct: 61 VLTTFEIDGTVLSDVELKLNIIEEVLRYIIVKQD 94
>gi|218245582|ref|YP_002370953.1| 30S ribosomal protein S6 [Cyanothece sp. PCC 8801]
gi|226703449|sp|B7JXP0|RS6_CYAP8 RecName: Full=30S ribosomal protein S6
gi|218166060|gb|ACK64797.1| ribosomal protein S6 [Cyanothece sp. PCC 8801]
Length = 124
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR +S +Q+ + +Y+ + E + V G R +AY I++ YV M
Sbjct: 5 YEMIYILRPSLSEEQVNQEVNKYRDFLNEYNVKDLQVKIWGKRRLAYPIKRFIDGIYVQM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
N + ++R MR+ E V+R +TL V++
Sbjct: 65 NYQGEGNQVAPLERAMRLSEEVIRYMTLKVETAVSE 100
>gi|237743346|ref|ZP_04573827.1| SSU ribosomal protein S6P [Fusobacterium sp. 7_1]
gi|256028464|ref|ZP_05442298.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
gi|229433125|gb|EEO43337.1| SSU ribosomal protein S6P [Fusobacterium sp. 7_1]
Length = 94
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 1 MRKYEIMYIINPTVLEEGREETINQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 61 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVVRQD 94
>gi|225432037|ref|XP_002273724.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296083213|emb|CBI22849.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + +++++ + Q I+E G++ +N+ G+R +AY+I+K + A+Y
Sbjct: 127 MRHYEVVYLIH-EKHDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKAKNAHY 185
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE V+R L + D
Sbjct: 186 ILMNFELEAQWINDFKTMLDQDERVIRHLVIKRDEAITE 224
>gi|291561868|emb|CBL40668.1| SSU ribosomal protein S6P [butyrate-producing bacterium SS3/4]
Length = 95
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L + + + + + I GG + V+E G + +AY I+K+++ +Y
Sbjct: 1 MNKYELAVVLSAKLEDDERAAALEKVKGYITRFGGNIVDVDEWGKKRLAYEIQKSKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ +E++ +RI E V+R L + D+
Sbjct: 61 YFIHFEGEANCPNEVEAHIRIMEPVVRYLCVRQDA 95
>gi|237739059|ref|ZP_04569540.1| SSU ribosomal protein S6P [Fusobacterium sp. 2_1_31]
gi|291460851|ref|ZP_06025541.2| ribosomal protein S6 [Fusobacterium periodonticum ATCC 33693]
gi|294783935|ref|ZP_06749257.1| ribosomal protein S6 [Fusobacterium sp. 1_1_41FAA]
gi|229423659|gb|EEO38706.1| SSU ribosomal protein S6P [Fusobacterium sp. 2_1_31]
gi|291380409|gb|EFE87927.1| ribosomal protein S6 [Fusobacterium periodonticum ATCC 33693]
gi|294479747|gb|EFG27526.1| ribosomal protein S6 [Fusobacterium sp. 1_1_41FAA]
Length = 105
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + + I Q SL+ NG + + G R +AY I K + +Y
Sbjct: 12 MKKYEIMYIINPTVLEEGRDELINQINSLLTANGATIAKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E V+R + + +D
Sbjct: 72 VLTTFEMDGTKLAEVEAKINIMEAVMRHIVVRLD 105
>gi|298243925|ref|ZP_06967732.1| ribosomal protein S6 [Ktedonobacter racemifer DSM 44963]
gi|297556979|gb|EFH90843.1| ribosomal protein S6 [Ktedonobacter racemifer DSM 44963]
Length = 180
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 55/93 (59%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE F+L ++S ++ + + + + ++ GG++ VN G R +AY I ++R YV
Sbjct: 3 RDYELAFILNPEVSEEETRTILDRVEQIVANYGGQIVKVNNWGRRRLAYPIERHRDGIYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
F+++ P + E++R +++ E+VLR +T D
Sbjct: 63 FIDMILTPETVAEIERTLKVSESVLRYMTKKRD 95
>gi|229176150|ref|ZP_04303642.1| 30S ribosomal protein S6 [Bacillus cereus MM3]
gi|228607309|gb|EEK64639.1| 30S ribosomal protein S6 [Bacillus cereus MM3]
Length = 90
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
S AI+E R +I+E++LR + + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIVVKEEE 89
>gi|300172596|ref|YP_003771761.1| 30S ribosomal protein S6 [Leuconostoc gasicomitatum LMG 18811]
gi|299886974|emb|CBL90942.1| 30S ribosomal protein S6 [Leuconostoc gasicomitatum LMG 18811]
Length = 98
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ S K + ++ S++ +NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLESDAKKALVERFDSILTDNGATITKSADWATRRFAYEIAGYREGVYHII 64
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSH 96
N + AAI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDAAINEFDRLAKISQDILRHMIIKRDAE 98
>gi|229159034|ref|ZP_04287090.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 4342]
gi|228624453|gb|EEK81224.1| 30S ribosomal protein S6 [Bacillus cereus ATCC 4342]
Length = 90
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
S AI+E R +I+E++LR + + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIIVKEEE 89
>gi|169824838|ref|YP_001692449.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 29328]
gi|297587221|ref|ZP_06945866.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 53516]
gi|302379566|ref|ZP_07268051.1| ribosomal protein S6 [Finegoldia magna ACS-171-V-Col3]
gi|303234497|ref|ZP_07321134.1| ribosomal protein S6 [Finegoldia magna BVS033A4]
gi|226703469|sp|B0S2G9|RS6_FINM2 RecName: Full=30S ribosomal protein S6
gi|167831643|dbj|BAG08559.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 29328]
gi|297575202|gb|EFH93921.1| 30S ribosomal protein S6 [Finegoldia magna ATCC 53516]
gi|302312473|gb|EFK94469.1| ribosomal protein S6 [Finegoldia magna ACS-171-V-Col3]
gi|302494331|gb|EFL54100.1| ribosomal protein S6 [Finegoldia magna BVS033A4]
Length = 95
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S + + Q +I EN G++ V++ G R +AY I ++ YY
Sbjct: 1 MNKYELVLIFKPELSEEDRNTVFSRIQQVIDEN-GKLEEVHDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+N P + E++R+ R+ + ++R + + VD
Sbjct: 60 YIVNFDLDPQFVKEIERRCRLFDQIIRYMVVRVDEQ 95
>gi|229020699|ref|ZP_04177426.1| 30S ribosomal protein S6 [Bacillus cereus AH1273]
gi|229065133|ref|ZP_04200426.1| 30S ribosomal protein S6 [Bacillus cereus AH603]
gi|228716162|gb|EEL67881.1| 30S ribosomal protein S6 [Bacillus cereus AH603]
gi|228740594|gb|EEL90865.1| 30S ribosomal protein S6 [Bacillus cereus AH1273]
Length = 90
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
S AI+E R +I+E++LR + + +
Sbjct: 61 SNSEAINEFDRLAKINEDILRHIVVKEEE 89
>gi|257783832|ref|YP_003179049.1| 30S ribosomal protein S6 [Atopobium parvulum DSM 20469]
gi|257472339|gb|ACV50458.1| ribosomal protein S6 [Atopobium parvulum DSM 20469]
Length = 97
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + I +GG V V + G R +A+ I + Y
Sbjct: 1 MKAYELLFFVDPASTEEVRAGVMKRIDVAITADGGVVDSVEDWGKRKLAFEIDDLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+N + P I E+ R +RI++ V R + +
Sbjct: 61 TLINFHADPTQIAELDRVLRINDAVKRHMIVRR 93
>gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172]
gi|227235567|gb|EEI85582.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172]
Length = 94
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + +++ + +++ I+EN GEV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIFKTELADADRNALLDRFKGHIEEN-GEVVSVDDWGKRRLAYEIADLKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ S P I E +R++R+ + VLR + + +
Sbjct: 60 YIVDFKSDPDHIKEFERRLRLSDFVLRYMVIRKE 93
>gi|296118482|ref|ZP_06837060.1| ribosomal protein S6 [Corynebacterium ammoniagenes DSM 20306]
gi|295968381|gb|EFG81628.1| ribosomal protein S6 [Corynebacterium ammoniagenes DSM 20306]
Length = 99
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ ++ GG+V V+ G R + Y I K + Y
Sbjct: 5 RHYEVMIILDPSQDERTVTPSLDKFLETVRSEGGKVENVDVWGKRRLLYPINKKEEGVYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E R++ ++++VLR+ L DS
Sbjct: 65 VVNLECESATVLEFDRRLSLNDSVLRTKVLRTDS 98
>gi|78777857|ref|YP_394172.1| 30S ribosomal protein S6 [Sulfurimonas denitrificans DSM 1251]
gi|91207800|sp|Q30PZ4|RS6_SULDN RecName: Full=30S ribosomal protein S6
gi|78498397|gb|ABB44937.1| SSU ribosomal protein S6P [Sulfurimonas denitrificans DSM 1251]
Length = 137
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ +++++I+ I + +I NGGE+ + +GMR +AY + KN + Y+
Sbjct: 1 MRNYENLVIVKPTLTAEEIQANISAIEEIITSNGGEIAARDAMGMRKLAYPLGKNERGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL-----TIQRHDRDDRNDR 115
+ + P+AI E++R+ RI+E +LR +T+ D++ + Q+ +
Sbjct: 61 HVIYYSVDPSAISEIERRFRINEELLRFVTIKYDTNREVTAWNQLVQKAQKKATQPAGEA 120
Query: 116 FPRDRNVDRKQHVSEEK 132
+ + EE+
Sbjct: 121 KVEEVVIPAALEEDEEE 137
>gi|225020028|ref|ZP_03709220.1| hypothetical protein CORMATOL_00024 [Corynebacterium matruchotii
ATCC 33806]
gi|224947163|gb|EEG28372.1| hypothetical protein CORMATOL_00024 [Corynebacterium matruchotii
ATCC 33806]
Length = 98
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + YV
Sbjct: 5 RHYEVMIILDPIQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E R + ++++VLR+ L D
Sbjct: 65 VVNLHCESATVQEFDRVLTLNDSVLRTKVLRNDK 98
>gi|257065462|ref|YP_003145134.1| ribosomal protein S6 [Slackia heliotrinireducens DSM 20476]
gi|256793115|gb|ACV23785.1| ribosomal protein S6 [Slackia heliotrinireducens DSM 20476]
Length = 97
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + + + + + ++ I N G+V V G R +AY I + Y
Sbjct: 1 MKAYEMLFFVAPTLDDETRLAAMKRVETTIAANNGQVDNVENWGRRKLAYEIAGLTEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
++ PA++ E+ R +RI + ++R + D E
Sbjct: 61 TLIDFHMDPASVAELDRVLRITDAIVRHKIVRRDDRE 97
>gi|293400275|ref|ZP_06644421.1| ribosomal protein S6 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306675|gb|EFE47918.1| ribosomal protein S6 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 100
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + +I ++ G + V+E G++ AY I+ K YY
Sbjct: 4 MKKYEIMYIVNASLEDAARTKVMDGLHKIITDHNGTIDQVDEWGVKEFAYEIKHMNKGYY 63
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
V +N+ + IHE R RI+ N++R + + E
Sbjct: 64 VVINVTANNEGIHEFDRLARINHNIVRYMIVKTQDEE 100
>gi|197302889|ref|ZP_03167941.1| hypothetical protein RUMLAC_01618 [Ruminococcus lactaris ATCC
29176]
gi|197298126|gb|EDY32674.1| hypothetical protein RUMLAC_01618 [Ruminococcus lactaris ATCC
29176]
Length = 95
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + D I + +++I GG V V+E G R AY I+K ++ +Y
Sbjct: 1 MNKYELAVVVSAKLEDEARADVIEKVKAMITRFGGNVTDVDEWGKRRFAYEIQKMKEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ + E+++++RI +NVLR L + ++
Sbjct: 61 YFVHFEAESTVPAEVEQRIRIMDNVLRYLCVKEEA 95
>gi|295108215|emb|CBL22168.1| SSU ribosomal protein S6P [Ruminococcus obeum A2-162]
Length = 95
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + + I G V V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVSAKVEDEVRDAVVEKAKGYIARYNGNVTEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|148543250|ref|YP_001270620.1| 30S ribosomal protein S6 [Lactobacillus reuteri DSM 20016]
gi|184152662|ref|YP_001841003.1| 30S ribosomal protein S6 [Lactobacillus reuteri JCM 1112]
gi|194467409|ref|ZP_03073396.1| ribosomal protein S6 [Lactobacillus reuteri 100-23]
gi|227364313|ref|ZP_03848406.1| ribosomal protein S6 [Lactobacillus reuteri MM2-3]
gi|227543725|ref|ZP_03973774.1| ribosomal protein S6 [Lactobacillus reuteri CF48-3A]
gi|300908790|ref|ZP_07126253.1| 30S ribosomal protein S6 [Lactobacillus reuteri SD2112]
gi|325683512|ref|ZP_08163028.1| 30S ribosomal protein S6 [Lactobacillus reuteri MM4-1A]
gi|189045474|sp|A5VHF9|RS6_LACRD RecName: Full=30S ribosomal protein S6
gi|226703481|sp|B2G4Z1|RS6_LACRJ RecName: Full=30S ribosomal protein S6
gi|148530284|gb|ABQ82283.1| SSU ribosomal protein S6P [Lactobacillus reuteri DSM 20016]
gi|183224006|dbj|BAG24523.1| 30S ribosomal protein S6 [Lactobacillus reuteri JCM 1112]
gi|194454445|gb|EDX43342.1| ribosomal protein S6 [Lactobacillus reuteri 100-23]
gi|227070626|gb|EEI08956.1| ribosomal protein S6 [Lactobacillus reuteri MM2-3]
gi|227186293|gb|EEI66364.1| ribosomal protein S6 [Lactobacillus reuteri CF48-3A]
gi|300894197|gb|EFK87555.1| 30S ribosomal protein S6 [Lactobacillus reuteri SD2112]
gi|324977862|gb|EGC14813.1| 30S ribosomal protein S6 [Lactobacillus reuteri MM4-1A]
Length = 98
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + + ++ ++ +NG + + R AY I K + Y
Sbjct: 4 RKYEITYIIRPDIEESAKSELVDRFDKILADNGATIADSKDWSTRRFAYPIAKYTEGTYH 63
Query: 62 FMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R + +++LR + + +D+
Sbjct: 64 VVNLTTDSDQALNEFDRLAKFSDDILRHMIVKLDA 98
>gi|242279493|ref|YP_002991622.1| ribosomal protein S6 [Desulfovibrio salexigens DSM 2638]
gi|242122387|gb|ACS80083.1| ribosomal protein S6 [Desulfovibrio salexigens DSM 2638]
Length = 103
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 53/94 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + LL +++S K+ + ++I GG++ +++ G R +AY ++ + YYV
Sbjct: 3 RKYEVLLLLSPELASDSRKEIVEGLIAIIDREGGKMDEIDDWGSRQLAYPVQNQTRGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +P + E++R +RI + + + +T+ +D
Sbjct: 63 RLIFDAPGPLVAELERNIRITDGIFKFVTVKLDE 96
>gi|125974672|ref|YP_001038582.1| SSU ribosomal protein S6P [Clostridium thermocellum ATCC 27405]
gi|256004129|ref|ZP_05429113.1| ribosomal protein S6 [Clostridium thermocellum DSM 2360]
gi|281418856|ref|ZP_06249875.1| ribosomal protein S6 [Clostridium thermocellum JW20]
gi|125714897|gb|ABN53389.1| SSU ribosomal protein S6P [Clostridium thermocellum ATCC 27405]
gi|255991877|gb|EEU01975.1| ribosomal protein S6 [Clostridium thermocellum DSM 2360]
gi|281407940|gb|EFB38199.1| ribosomal protein S6 [Clostridium thermocellum JW20]
gi|316941797|gb|ADU75831.1| ribosomal protein S6 [Clostridium thermocellum DSM 1313]
Length = 95
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++ ++S ++ K + + + I+ + ++ ++E G R +AY I + YYV
Sbjct: 3 RKYETIFIINPELSEEETKALVEKIKGTIEAS-AQLESIDEWGKRKLAYPIDHFNEGYYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N + E++R RI + +++ + + +
Sbjct: 62 LANFTADSNFPRELERIFRITDGIIKDIIVKREK 95
>gi|305681636|ref|ZP_07404442.1| ribosomal protein S6 [Corynebacterium matruchotii ATCC 14266]
gi|305658796|gb|EFM48297.1| ribosomal protein S6 [Corynebacterium matruchotii ATCC 14266]
Length = 99
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ ++++ G V V+ G R +AY I K + YV
Sbjct: 6 RHYEVMIILDPIQDERTVAPSLDKFLEIVRKENGTVEKVDIWGKRRLAYPIAKKEEGIYV 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ A + E R + ++++VLR+ L D
Sbjct: 66 VVNLHCESATVQEFDRVLTLNDSVLRTKVLRNDK 99
>gi|212697310|ref|ZP_03305438.1| hypothetical protein ANHYDRO_01878 [Anaerococcus hydrogenalis DSM
7454]
gi|325848912|ref|ZP_08170422.1| ribosomal protein S6 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675759|gb|EEB35366.1| hypothetical protein ANHYDRO_01878 [Anaerococcus hydrogenalis DSM
7454]
gi|325480556|gb|EGC83618.1| ribosomal protein S6 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 94
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S ++ ++ ++ +I +N GEV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIYKPEVSDEERNKSLEIFKGIIADN-GEVESVDDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + I E +R++RI + +LR + + +
Sbjct: 60 YIVDFKASGDHIKEFERRLRISDLILRFMVIRKE 93
>gi|320095142|ref|ZP_08026850.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977924|gb|EFW09559.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 96
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + T+ +Y + + GG V V+ G R +AY I K + Y
Sbjct: 1 MRKYELMVILDPSIDERTVAPTMEKYLAPVTAGGGSVENVDVWGKRRLAYDILKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + P E+ R+M IDE +LR+ L D+H
Sbjct: 61 VVIDMTTTPEVALEINRRMGIDETILRTKLLRPDAH 96
>gi|300934404|ref|ZP_07149660.1| 30S ribosomal protein S6 [Corynebacterium resistens DSM 45100]
Length = 95
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ +Y ++++ G V V+ G R + Y I K + Y
Sbjct: 1 MRQYEMMIIIDPSQDERTVAPSLDKYLEIVRKENGTVEKVDIWGKRRLEYPINKKDEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ A + E+ R ++I+++++R+ L D+
Sbjct: 61 VVLDLKCESATVQELDRVLKINDDIMRTKVLRKDA 95
>gi|260584269|ref|ZP_05852016.1| 30S ribosomal protein S6 [Granulicatella elegans ATCC 700633]
gi|260157787|gb|EEW92856.1| 30S ribosomal protein S6 [Granulicatella elegans ATCC 700633]
Length = 101
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + + ++ +++ +NG V + R AY I+ + Y
Sbjct: 6 KYEILYIIRPNIDEAAKAELVARFDAVLADNGAVVVESKDWAKRRFAYEIKDFHEGIYHL 65
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+NI + AI E R +I ++LR + + V++
Sbjct: 66 VNITAEDAKAIDEFDRLAKISNDILRHMVVKVEA 99
>gi|257789799|ref|YP_003180405.1| 30S ribosomal protein S6 [Eggerthella lenta DSM 2243]
gi|317489258|ref|ZP_07947775.1| ribosomal protein S6 [Eggerthella sp. 1_3_56FAA]
gi|325832225|ref|ZP_08165224.1| ribosomal protein S6 [Eggerthella sp. HGA1]
gi|257473696|gb|ACV54016.1| ribosomal protein S6 [Eggerthella lenta DSM 2243]
gi|316911659|gb|EFV33251.1| ribosomal protein S6 [Eggerthella sp. 1_3_56FAA]
gi|325486061|gb|EGC88515.1| ribosomal protein S6 [Eggerthella sp. HGA1]
Length = 97
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F + I + + + + I E G V V+ G R +AY I Y
Sbjct: 1 MKAYELLFFVAPSIDEETRAAVMKRIDTTIAEGKGTVDNVDNWGKRKLAYEINGLTDGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + PA + E+ R +RI + V R + +
Sbjct: 61 TLIDFHADPADVAELDRVLRITDAVERHMIVKR 93
>gi|160944122|ref|ZP_02091352.1| hypothetical protein FAEPRAM212_01624 [Faecalibacterium
prausnitzii M21/2]
gi|158444798|gb|EDP21802.1| hypothetical protein FAEPRAM212_01624 [Faecalibacterium
prausnitzii M21/2]
gi|295105041|emb|CBL02585.1| SSU ribosomal protein S6P [Faecalibacterium prausnitzii SL3/3]
Length = 94
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G+++SLI+ N G + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEASAALVGKFKSLIEAN-GTIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N S P+ E+ R +I E V+RSL + +
Sbjct: 60 TVINFTSEPSFPAELDRVYKITEGVMRSLIIAHEE 94
>gi|77919595|ref|YP_357410.1| 30S ribosomal protein S6 [Pelobacter carbinolicus DSM 2380]
gi|91207926|sp|Q3A317|RS6_PELCD RecName: Full=30S ribosomal protein S6
gi|77545678|gb|ABA89240.1| SSU ribosomal protein S6P [Pelobacter carbinolicus DSM 2380]
Length = 115
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ ++ D + + + +++ ++ + + V+E G+R +AY ++K + Y
Sbjct: 1 MRTYENIMIVHPDKVADEYNAVVEKFKGVLTDLNANLLKVDEWGVRKLAYPVKKQGRGSY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + P I E +R++R+DE V++ T+L++
Sbjct: 61 VLTVFEADPTIIDEYERRLRLDEAVIKFQTVLLEK 95
>gi|262197681|ref|YP_003268890.1| ribosomal protein S6 [Haliangium ochraceum DSM 14365]
gi|262081028|gb|ACY16997.1| ribosomal protein S6 [Haliangium ochraceum DSM 14365]
Length = 210
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 54/94 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++LR ++ + + + + +++ GG+V V+ G R +AY I+K RK Y+
Sbjct: 23 REYETIYILRPGTTNDGVAEVNTRVRGIVENMGGKVLQVDNWGKRRLAYEIQKERKGIYL 82
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I E++R +R+ + V+R +T+ +D+
Sbjct: 83 HWQFLATRGVIDEVERNLRMLDAVVRYMTIKLDA 116
>gi|283850176|ref|ZP_06367465.1| ribosomal protein S6 [Desulfovibrio sp. FW1012B]
gi|283574202|gb|EFC22173.1| ribosomal protein S6 [Desulfovibrio sp. FW1012B]
Length = 102
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 54/93 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL ++++ ++ I + +++ + LV+E GMR +AY ++K + ++
Sbjct: 1 MRKYEALLLLSPELATDNRQEIIENLKGVLERQSATILLVDEWGMRDLAYPVQKKSRGHF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
A+P AI E +R +RI + +++ +T+ +
Sbjct: 61 TRFEFAAPATAIAEFERIVRITDGIMKFITVKL 93
>gi|228924219|ref|ZP_04087490.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229051143|ref|ZP_04194687.1| 30S ribosomal protein S6 [Bacillus cereus AH676]
gi|228722206|gb|EEL73607.1| 30S ribosomal protein S6 [Bacillus cereus AH676]
gi|228835437|gb|EEM80807.1| 30S ribosomal protein S6 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 90
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R + + K + ++ ++ NG E+ E G R +AY I R+ +Y+ +N+
Sbjct: 1 MYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVK 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
S AI+E R +I+E++LR + + +
Sbjct: 61 SNAEAINEFDRLAKINEDILRHIVVKEEE 89
>gi|332710818|ref|ZP_08430755.1| SSU ribosomal protein S6P [Lyngbya majuscula 3L]
gi|332350371|gb|EGJ29974.1| SSU ribosomal protein S6P [Lyngbya majuscula 3L]
Length = 102
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 55/89 (61%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+++LR D+ +Q+ IG+Y+ L+QE GGE + G R +AY I + R+ Y+ MN
Sbjct: 1 MYILRPDLGEEQVDQAIGKYRDLLQELGGEQIEIQHRGKRRLAYPIDRYREGIYIQMNYN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
P + +++R MR+ ++V+R LT+ +S
Sbjct: 61 GPGTHVAKIERAMRLSQDVIRYLTIRQES 89
>gi|224282367|ref|ZP_03645689.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
gi|310286811|ref|YP_003938069.1| ribosomal protein S6 [Bifidobacterium bifidum S17]
gi|311063709|ref|YP_003970434.1| 30S ribosomal protein S6P RpsF [Bifidobacterium bifidum PRL2010]
gi|313139511|ref|ZP_07801704.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
gi|309250747|gb|ADO52495.1| ribosomal protein S6 [Bifidobacterium bifidum S17]
gi|310866028|gb|ADP35397.1| RpsF SSU ribosomal protein S6P [Bifidobacterium bifidum PRL2010]
gi|313132021|gb|EFR49638.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171]
Length = 98
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSVENTDIWGRRKLAYEIDGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + P E+ R + ++E+V+R+ L D+
Sbjct: 65 VNYTTTPEVSAELDRVLNLNESVVRTKILRKDA 97
>gi|153810613|ref|ZP_01963281.1| hypothetical protein RUMOBE_00994 [Ruminococcus obeum ATCC 29174]
gi|149833792|gb|EDM88873.1| hypothetical protein RUMOBE_00994 [Ruminococcus obeum ATCC 29174]
Length = 95
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + +S I G V V E G + +AY I+K + +Y
Sbjct: 1 MNKYELALVVSAKVEDEVRDAVVEKAKSYIARYNGNVTEVEEWGKKKLAYEIQKMHEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D+
Sbjct: 61 YFIQFEADAQCPAEVERHVRIMDNVLRYLVVRKDA 95
>gi|260662544|ref|ZP_05863439.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
gi|260553235|gb|EEX26178.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
Length = 97
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + + ++ ++ +NG V + G R AY+I K + Y
Sbjct: 4 RKYEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWGTRRFAYQIGKYTEGTYH 63
Query: 62 FMNIASPPAA-IHEMKRKMRIDENVLRSLTLLV 93
+N+ + A ++E R + +++LR + +
Sbjct: 64 IVNVTADSDASLNEFDRLAKFSDDILRHMIVKR 96
>gi|295099559|emb|CBK88648.1| ribosomal protein S6 [Eubacterium cylindroides T2-87]
Length = 97
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + Q + I N G + V++ G++ AY I +K +Y
Sbjct: 1 MKKYEIMYIINASLDEAQFTAVQDRLHQTITNNQGTIDNVDDWGIKEFAYEIDHMKKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +N+ + I E +R RI NV+R + + +
Sbjct: 61 VVINVTANNEGIAEFQRLSRISNNVVRIMVVKTE 94
>gi|254283856|ref|ZP_04958824.1| Na+/solute symporter [gamma proteobacterium NOR51-B]
gi|219680059|gb|EED36408.1| Na+/solute symporter [gamma proteobacterium NOR51-B]
Length = 127
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 55/111 (49%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
I +Y ++I ++GG V + + G R ++Y I K KA+YV MN+ + A+ E+ R
Sbjct: 1 MIERYTNVITKDGGTVHRLEDWGRRQLSYHINKVHKAHYVLMNVEASNEAMEELTTTFRF 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEEK 132
++ V+R+L + D +L ++ D ++R K+ ++
Sbjct: 61 NDAVIRNLVIRRDEPVAEESLIMKAEKEDRERKSRYQERQATEKRESRDDA 111
>gi|150387885|ref|YP_001317934.1| ribosomal protein S6 [Alkaliphilus metalliredigens QYMF]
gi|167011241|sp|A6TJA7|RS6_ALKMQ RecName: Full=30S ribosomal protein S6
gi|149947747|gb|ABR46275.1| ribosomal protein S6 [Alkaliphilus metalliredigens QYMF]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++L+ + ++ +++ +I+ +G V V+E G R +AY I K + YY
Sbjct: 1 MNKYELTYILKSETDEEKRNQLAEKFKGIIEADGA-VENVDEWGNRKLAYEIDKRNEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N AS E+ R ++I E V+R + + +
Sbjct: 60 VLVNFASSIDVPKELDRNLKIAEQVIRHMIIRIQE 94
>gi|113477336|ref|YP_723397.1| 30S ribosomal protein S6 [Trichodesmium erythraeum IMS101]
gi|123351920|sp|Q10XV0|RS6_TRIEI RecName: Full=30S ribosomal protein S6
gi|110168384|gb|ABG52924.1| SSU ribosomal protein S6P [Trichodesmium erythraeum IMS101]
Length = 117
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 1 MKL--YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
M YE +++LR D++ ++++ I +Y+S+++E G + G +AY I R+
Sbjct: 1 MNKFIYETMYILRPDMTEEKVEQAITKYKSMLEEQGAYDIKIQHRGKLRLAYEINNQREG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y+ MN PP I ++R MR+ E V+R LT+ +
Sbjct: 61 IYIQMNYQGPPTQIAILERAMRLSEEVIRYLTVKQE 96
>gi|114568045|ref|YP_755199.1| 30S ribosomal protein S6 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122317111|sp|Q0ATX6|RS6_SYNWW RecName: Full=30S ribosomal protein S6
gi|114338980|gb|ABI69828.1| SSU ribosomal protein S6P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 97
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGE-VRLVNELGMRTIAYRIRKNRKAY 59
M+ YE +F+LR D+ +Q+ +T + Q +I + GGE + + G + +AY I +
Sbjct: 1 MRTYEMMFVLRPDLEEEQVLETKERLQKIIADFGGEFINAADGWGKKRLAYAIDDYVEGI 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y P + E+ R ++I EN LR + + D
Sbjct: 61 YSLWYFKGKPETVDELDRIIKISENFLRHIIIRQDE 96
>gi|260495034|ref|ZP_05815163.1| ribosomal protein S6 [Fusobacterium sp. 3_1_33]
gi|260197477|gb|EEW94995.1| ribosomal protein S6 [Fusobacterium sp. 3_1_33]
Length = 105
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREETISQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 72 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVVRQD 105
>gi|289766385|ref|ZP_06525763.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
gi|289717940|gb|EFD81952.1| SSU ribosomal protein S6P [Fusobacterium sp. D11]
Length = 105
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + ++TI Q +L+ NG + + G R +AY I K + +Y
Sbjct: 12 MRKYEIMYIINPTVLEEGREETINQVNALLTSNGATITKTEKWGERKLAYPIDKKKSGFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E+V+R + + D
Sbjct: 72 VLTTFEIDGTKLAEVEAKVNIMESVMRYIVVRQD 105
>gi|309390334|gb|ADO78214.1| ribosomal protein S6 [Halanaerobium praevalens DSM 2228]
Length = 99
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE F+L+ D+ ++ + + + +S I E+ GEV V+ G + +AY I+ R Y
Sbjct: 6 RDYETTFVLKPDLEDEEKQTILKRVKSAISEHEGEVTEVDAWGKKQLAYEIKDYRSGDYT 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + ++E++R +I + VLR L + D+
Sbjct: 66 ILEFNAQTTVVNELERIFKIMDGVLRYLVVRNDA 99
>gi|28376981|ref|NP_783873.1| 30S ribosomal protein S6 [Lactobacillus plantarum WCFS1]
gi|254555176|ref|YP_003061593.1| 30S ribosomal protein S6 [Lactobacillus plantarum JDM1]
gi|300769112|ref|ZP_07079001.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179198|ref|YP_003923326.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|32171524|sp|Q890K2|RS6_LACPL RecName: Full=30S ribosomal protein S6
gi|28269812|emb|CAD62709.1| ribosomal protein S6 [Lactobacillus plantarum WCFS1]
gi|254044103|gb|ACT60896.1| 30S ribosomal protein S6 [Lactobacillus plantarum JDM1]
gi|300493352|gb|EFK28531.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308044689|gb|ADN97232.1| 30S ribosomal protein S6 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 99
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++R DI + ++ ++ +NG +V + R AY I + Y
Sbjct: 5 KKYEITYIVRPDIDDAAKTALVDRFDKILTDNGAQVIDSKDWSKRRFAYEIGGFNEGTYH 64
Query: 62 FMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N+ + AA++E R +I++++LR + + +
Sbjct: 65 IVNLTATDDAALNEFDRLSKINDDILRHMIVKRE 98
>gi|224542223|ref|ZP_03682762.1| hypothetical protein CATMIT_01398 [Catenibacterium mitsuokai DSM
15897]
gi|224524858|gb|EEF93963.1| hypothetical protein CATMIT_01398 [Catenibacterium mitsuokai DSM
15897]
Length = 96
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLV--NELGMRTIAYRIRKNRKA 58
M YE + +L+ D+ + +++++ E G V V +LG+R +AY I+ K
Sbjct: 1 MNKYEIMMILKPDLEDDAKTALLDGFKAILTEGEGVVDNVDTEKLGLRELAYEIKDYTKG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
YV ++ + AI E +R RI+ +VLR LTL D
Sbjct: 61 LYVVIDTHTTAEAIAEFERLSRINPSVLRHLTLRRD 96
>gi|145296972|ref|YP_001139793.1| 30S ribosomal protein S6 [Corynebacterium glutamicum R]
gi|140846892|dbj|BAF55891.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 98
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 50/94 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + + ++ ++ +++++ G+V V+ G R +AY I K + Y
Sbjct: 5 RQYELMIILDPSQDERTVAPSLDKFLEVVRKDKGDVVKVDVWGKRRLAYPIDKKEEGVYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + +++ VLR+ L +D
Sbjct: 65 VVDLKCESATVLELDRVLNLNDGVLRTKVLRLDK 98
>gi|257452937|ref|ZP_05618236.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|257466683|ref|ZP_05630994.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
gi|315917836|ref|ZP_07914076.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059478|ref|ZP_07923963.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|313685154|gb|EFS21989.1| SSU ribosomal protein S6P [Fusobacterium sp. 3_1_5R]
gi|313691711|gb|EFS28546.1| SSU ribosomal protein S6P [Fusobacterium gonidiaformans ATCC
25563]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + I + L+ NG + + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIISPTVLEEGRDAIIEKVSELLTSNGANILKTEKWGERKLAYLIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E V+R + + D
Sbjct: 61 VLTTFEIDGTKLAEVESKLNITEEVMRYIVVKQD 94
>gi|16799116|ref|NP_469384.1| 30S ribosomal protein S6 [Listeria innocua Clip11262]
gi|116871457|ref|YP_848238.1| 30S ribosomal protein S6 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|289433404|ref|YP_003463276.1| 30S ribosomal protein S6 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|315295543|ref|ZP_07872232.1| ribosomal protein S6 [Listeria ivanovii FSL F6-596]
gi|24212317|sp|Q92FR6|RS6_LISIN RecName: Full=30S ribosomal protein S6
gi|123463367|sp|A0AEM1|RS6_LISW6 RecName: Full=30S ribosomal protein S6
gi|16412458|emb|CAC95270.1| ribosomal protein S6 [Listeria innocua Clip11262]
gi|116740335|emb|CAK19453.1| 30S ribosomal protein S6 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|289169648|emb|CBH26184.1| 30S ribosomal protein S6 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313621548|gb|EFR92405.1| ribosomal protein S6 [Listeria innocua FSL S4-378]
gi|313625736|gb|EFR95378.1| ribosomal protein S6 [Listeria innocua FSL J1-023]
gi|313630796|gb|EFR98531.1| ribosomal protein S6 [Listeria ivanovii FSL F6-596]
gi|313635424|gb|EFS01681.1| ribosomal protein S6 [Listeria seeligeri FSL N1-067]
gi|313640068|gb|EFS04704.1| ribosomal protein S6 [Listeria seeligeri FSL S4-171]
Length = 97
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++++R +I + K + ++ ++ ENG E+ E G R +AY I R +Y
Sbjct: 3 RKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYH 62
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + +I+E R +I ++++R + + ++
Sbjct: 63 IVKLNADKADSINEFDRLAKISDDIVRHMVIKEEA 97
>gi|317133424|ref|YP_004092738.1| ribosomal protein S6 [Ethanoligenens harbinense YUAN-3]
gi|315471403|gb|ADU28007.1| ribosomal protein S6 [Ethanoligenens harbinense YUAN-3]
Length = 95
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V + + ++ + + ++++L+ EN G + V+E G R +AY I + YV
Sbjct: 6 KYESVIIFKPNLGEEATSALLEKFKTLVSEN-GTLETVDEWGRRRLAYPIEDENEGIYVQ 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+S E+ R++++ + VLRSL +
Sbjct: 65 FLFSSDNTFPAELDRQLKLSDGVLRSLIVR 94
>gi|225571306|ref|ZP_03780302.1| hypothetical protein CLOHYLEM_07404 [Clostridium hylemonae DSM
15053]
gi|225159782|gb|EEG72401.1| hypothetical protein CLOHYLEM_07404 [Clostridium hylemonae DSM
15053]
Length = 109
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 54/95 (56%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + ++L++ GG V V+E G + +AY I+K ++AYY
Sbjct: 15 MNKYELAVVVSAKIEDDERAQVVEKVKALVERFGGSVTDVDEWGKKRLAYEIQKMKEAYY 74
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E+++++RI +NVLR L + ++
Sbjct: 75 YFIHFESAAEVPGEIEQRIRIMDNVLRYLCVKQEA 109
>gi|261366669|ref|ZP_05979552.1| ribosomal protein S6 [Subdoligranulum variabile DSM 15176]
gi|282571490|gb|EFB77025.1| ribosomal protein S6 [Subdoligranulum variabile DSM 15176]
Length = 94
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + ++ + I ++++LI N G + V++ G + +AY I + Y
Sbjct: 1 MAKYETMMVTTANLDEEASAALINKFKNLIAAN-GTIDSVDDWGKKRLAYPINDETEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ S P E+ R +I E VLRS+ + +
Sbjct: 60 TVIKFTSEPDFPAELDRVYKITEGVLRSMIIAEEE 94
>gi|152968282|ref|YP_001364066.1| ribosomal protein S6 [Kineococcus radiotolerans SRS30216]
gi|151362799|gb|ABS05802.1| ribosomal protein S6 [Kineococcus radiotolerans SRS30216]
Length = 98
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 55/95 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L ++ + + ++ ++ +++++ GGEV V+ G R +AY I+K + Y
Sbjct: 4 RQYELMVILDAELEERTVAPSLDRFLNVVRQGGGEVGKVDIWGRRRLAYDIKKKSEGIYA 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + PA E+ R++ ++E VLR+ L ++
Sbjct: 64 VIELNTEPAVAQELDRQLNLNEGVLRTKLLRAEAA 98
>gi|194398723|ref|YP_002038173.1| 30S ribosomal protein S6 [Streptococcus pneumoniae G54]
gi|226695289|sp|B5E6A6|RS6_STRP4 RecName: Full=30S ribosomal protein S6
gi|194358390|gb|ACF56838.1| 30S ribosomal protein S6 [Streptococcus pneumoniae G54]
Length = 96
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V R +AY I+ R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + AA+ E R +I+ ++LR + + +D+
Sbjct: 61 HIVXVEANDDAALKEFDRLSKINADILRHMIVKIDA 96
>gi|283768495|ref|ZP_06341407.1| ribosomal protein S6 [Bulleidia extructa W1219]
gi|283104887|gb|EFC06259.1| ribosomal protein S6 [Bulleidia extructa W1219]
Length = 101
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++++ + +++ + + Q + NG + +E GMR AY I +K YY
Sbjct: 1 MRKYEVMYIIKESVETEKRGELMNQIAGFLTNNGAVITKTDEWGMRDFAYEIDDMKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + + AA+ E R M I+ NV+R + ++ E
Sbjct: 61 VVLKFEADNAAVKEFDRLMSINVNVVRFMITRDEAAEAE 99
>gi|116490136|ref|YP_809664.1| ribosomal protein S6 [Oenococcus oeni PSU-1]
gi|118587502|ref|ZP_01544927.1| 30S ribosomal protein S6 [Oenococcus oeni ATCC BAA-1163]
gi|290889530|ref|ZP_06552620.1| hypothetical protein AWRIB429_0010 [Oenococcus oeni AWRIB429]
gi|122277673|sp|Q04HQ7|RS6_OENOB RecName: Full=30S ribosomal protein S6
gi|116090861|gb|ABJ56015.1| SSU ribosomal protein S6P [Oenococcus oeni PSU-1]
gi|118432152|gb|EAV38893.1| 30S ribosomal protein S6 [Oenococcus oeni ATCC BAA-1163]
gi|290480728|gb|EFD89362.1| hypothetical protein AWRIB429_0010 [Oenococcus oeni AWRIB429]
Length = 146
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++R D+ + ++ S++ +NG ++ + R AY I R+ Y
Sbjct: 1 MANYELTYIVRPDLDKDAKAALVTRFDSILSDNGAKIDKSEDWDTRRFAYEINNYRQGTY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD----SHEQSPTLTIQRHDRDDRNDR 115
+ +S A++E R +I ++LR + + VD + + + + R R
Sbjct: 61 HIVTFSSEDEKAVNEFDRLAKISGDILRHMIVAVDLEKLADAHAKQAAATQRAAERRAQR 120
Query: 116 FPRDRNVDRKQHVSEEK 132
+ S +
Sbjct: 121 EAERNAAQAQSSASNQA 137
>gi|256848500|ref|ZP_05553942.1| ribosomal protein S6 [Lactobacillus coleohominis 101-4-CHN]
gi|256714767|gb|EEU29746.1| ribosomal protein S6 [Lactobacillus coleohominis 101-4-CHN]
Length = 97
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + ++ ++ +NG V + R AY I K + Y
Sbjct: 4 RKYEITYIIRPDIDESAKSALVERFDKVLSDNGATVVDSKDWSTRRFAYPIDKYTEGTYH 63
Query: 62 FMNIASPPAA-IHEMKRKMRIDENVLRSLTLLV 93
+N+ + ++E R + +++LR + +
Sbjct: 64 VINVTTDNDQPLNEFDRLSKFSDDILRHMIVKR 96
>gi|268679498|ref|YP_003303929.1| ribosomal protein S6 [Sulfurospirillum deleyianum DSM 6946]
gi|268617529|gb|ACZ11894.1| ribosomal protein S6 [Sulfurospirillum deleyianum DSM 6946]
Length = 132
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 65/132 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +++ ++ ++++ + + ++++NG + E+G R +AY+I K + Y
Sbjct: 1 MRHYELLVVVKPTLTVEELQAKLSYLKEILEKNGAVIAATLEMGTRKLAYQIDKFERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
V +P AAI E++R +RI E +R +T+ ++ ++ Q + D
Sbjct: 61 VVFYFTAPTAAIAEVERLIRITEEFIRFMTVKFENQKELGFWNKQVEKITKKVDVPAAVE 120
Query: 121 NVDRKQHVSEEK 132
+ + + E
Sbjct: 121 SKEIVEDTVTEA 132
>gi|298530248|ref|ZP_07017650.1| ribosomal protein S6 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509622|gb|EFI33526.1| ribosomal protein S6 [Desulfonatronospira thiodismutans ASO3-1]
Length = 103
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + LL ++ S + ++ ++++NGG+V ++ G++T+AY ++K + Y+ M
Sbjct: 5 YETLLLLNPELGSDGSNALLEKFSGVLEKNGGQVIKNDDWGLKTLAYPVKKQTRGRYIRM 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ P A + E +R +RI + V + LT+ +
Sbjct: 65 EYSLPAAQVSEFERNIRIADGVFKFLTVKL 94
>gi|313113166|ref|ZP_07798792.1| ribosomal protein S6 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624505|gb|EFQ07834.1| ribosomal protein S6 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 94
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + + + +G+++SLI+ N G + ++E G R +AY I + Y
Sbjct: 1 MAKYETMLITSAALDEEATAALVGKFKSLIEAN-GTIDSIDEWGKRRLAYPINDEEEGVY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ S P+ E+ R +I E V+RSL + +
Sbjct: 60 TVIDFTSEPSFPAELDRVYKITEGVMRSLIIAHEE 94
>gi|193214372|ref|YP_001995571.1| 30S ribosomal protein S6 [Chloroherpeton thalassium ATCC 35110]
gi|254765229|sp|B3QVR7|RS6_CHLT3 RecName: Full=30S ribosomal protein S6
gi|193087849|gb|ACF13124.1| ribosomal protein S6 [Chloroherpeton thalassium ATCC 35110]
Length = 133
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I T+ + LI G EV+ V ++G + +AY I K YYV
Sbjct: 3 KLYETTIVVDGGLDESVIAATVEKVTGLITSLGCEVKTVLDVGRKNLAYPIGKATIGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ S A+ E++R+ R++E+++R LT+++D L ++ + N
Sbjct: 63 HIEFESDGTALKELERQYRLNESIIRFLTIILDKRL----LEMRERVLKYGAPPQTSEDN 118
Query: 122 VDRKQHVSEEKPLS 135
+ EEK S
Sbjct: 119 SSEGEEFVEEKKSS 132
>gi|257125007|ref|YP_003163121.1| ribosomal protein S6 [Leptotrichia buccalis C-1013-b]
gi|257048946|gb|ACV38130.1| ribosomal protein S6 [Leptotrichia buccalis C-1013-b]
Length = 94
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L ++ ++ + + + ++ G G R +AY I+K YY
Sbjct: 1 MRNYEIMFILSTQLTDEEKQAGVAFVEKILTAAGATEVKTEIWGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + +E++ K+ I+E++L+ + + D
Sbjct: 61 VLTTFQADGTKFNEIETKLNINESILKYMIVKND 94
>gi|170016527|ref|YP_001727446.1| ribosomal protein S6 [Leuconostoc citreum KM20]
gi|169803384|gb|ACA82002.1| Ribosomal protein S6 [Leuconostoc citreum KM20]
Length = 98
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ NG + + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDMEADAKKALVERFDGILTNNGATITKSADWATRRFAYEIAGYREGVYHVI 64
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSH 96
N + AAI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDAAINEFDRLAKISQDILRHMIVKRDAE 98
>gi|331083587|ref|ZP_08332698.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403798|gb|EGG83350.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 95
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + + I G V V E G + +AY I+K R+ YY
Sbjct: 1 MNKYELALVVNAKIDDEARAAVVEKAKDYIARYNGTVTEVEEWGKKRLAYEIQKMREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ S A E++ ++RI +NVLR L + ++
Sbjct: 61 YFIQFESDAACPAEVEGRIRIMDNVLRYLVVKKEA 95
>gi|171742014|ref|ZP_02917821.1| hypothetical protein BIFDEN_01117 [Bifidobacterium dentium ATCC
27678]
gi|283456852|ref|YP_003361416.1| 30S ribosomal protein S6 [Bifidobacterium dentium Bd1]
gi|306824378|ref|ZP_07457747.1| 30S ribosomal protein S6 [Bifidobacterium dentium ATCC 27679]
gi|309802012|ref|ZP_07696125.1| ribosomal protein S6 [Bifidobacterium dentium JCVIHMP022]
gi|171277628|gb|EDT45289.1| hypothetical protein BIFDEN_01117 [Bifidobacterium dentium ATCC
27678]
gi|283103486|gb|ADB10592.1| 30S ribosomal protein S6 [Bifidobacterium dentium Bd1]
gi|304552409|gb|EFM40327.1| 30S ribosomal protein S6 [Bifidobacterium dentium ATCC 27679]
gi|308221347|gb|EFO77646.1| ribosomal protein S6 [Bifidobacterium dentium JCVIHMP022]
Length = 95
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG V ++ G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLELVTKEGGAVENIDIWGRRKLAYEIADKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N ++ PA E+ R + ++E+V+R+ L
Sbjct: 65 VNYSAEPATSDELDRLLNLNESVIRTKILR 94
>gi|229817073|ref|ZP_04447355.1| hypothetical protein BIFANG_02328 [Bifidobacterium angulatum DSM
20098]
gi|229784862|gb|EEP20976.1| hypothetical protein BIFANG_02328 [Bifidobacterium angulatum DSM
20098]
Length = 98
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG V + G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSVDEPDYWGRRKLAYEIAGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++ PA E+ R + ++E+V+R+ L D+
Sbjct: 65 VTYSAEPATSDELDRVLNLNESVIRTKILRKDA 97
>gi|149918390|ref|ZP_01906880.1| ribosomal protein S6 [Plesiocystis pacifica SIR-1]
gi|149820690|gb|EDM80100.1| ribosomal protein S6 [Plesiocystis pacifica SIR-1]
Length = 183
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ +E +LR D + + I+ + + Q++ NGG ++ ++ G+RT+AY I+ RK Y+
Sbjct: 17 REFEVTMILRPDTNKEGIQSLVARIQAIFDSNGGRMQKIDNWGLRTLAYPIQSQRKGIYL 76
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
++ + E++R RI V+R LT++VD + + D D+ +
Sbjct: 77 YVRFLGGSDMVKELERNFRIYPEVVRYLTVMVDENVN---PEARPSDIDEEALDAASESA 133
Query: 122 VD 123
D
Sbjct: 134 PD 135
>gi|78188077|ref|YP_378415.1| 30S ribosomal protein S6 [Chlorobium chlorochromatii CaD3]
gi|91207907|sp|Q3ANR5|RS6_CHLCH RecName: Full=30S ribosomal protein S6
gi|78170276|gb|ABB27372.1| SSU ribosomal protein S6P [Chlorobium chlorochromatii CaD3]
Length = 132
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + + T+ Q +I E GG + V +LG R AY I+K YYV
Sbjct: 5 KLYECTAIIDGGLQDEAVAATLAMVQRVITEKGGTINSVLDLGRRKTAYPIKKKSMGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + I E++R +R +E +LR L + + +P L +++
Sbjct: 65 HIEFNAAAPVIAEIERVLRYEEELLRYLIIQL----TTPLLEMRKR 106
>gi|224099095|ref|XP_002311372.1| predicted protein [Populus trichocarpa]
gi|222851192|gb|EEE88739.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 11/144 (7%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V+L+ + +++ + Q ++E G + N+ GMR +AY+I+K + A+Y+
Sbjct: 133 RHYEVVYLIH-EKHDEEVGSLNEKVQDFVREKKGRIWRFNDWGMRRLAYKIQKAKNAHYI 191
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL----------TIQRHDRDD 111
MN I++ K + DE V+R L + D + +D +D
Sbjct: 192 LMNFELEARWINDFKNMLDKDERVIRHLVIKRDEAITEDCPPPPEFHTLQGGMDNNDEED 251
Query: 112 RNDRFPRDRNVDRKQHVSEEKPLS 135
D D D V E
Sbjct: 252 GLDYDDNDEAYDEDLEVEAEAVYG 275
>gi|167760813|ref|ZP_02432940.1| hypothetical protein CLOSCI_03198 [Clostridium scindens ATCC
35704]
gi|167661700|gb|EDS05830.1| hypothetical protein CLOSCI_03198 [Clostridium scindens ATCC
35704]
Length = 95
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + I + ++L++ GG++ V+E G + +AY I+K ++AYY
Sbjct: 1 MNKYELAVVVSAKIEDDERAQVIEKVKALVERFGGKISDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E+++++RI +NVLR L + ++
Sbjct: 61 YFIHFESESDVPGEIEQRIRIMDNVLRYLCVRQEA 95
>gi|15674173|ref|NP_268348.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. lactis
Il1403]
gi|281492847|ref|YP_003354827.1| 50S ribosomal protein S6P [Lactococcus lactis subsp. lactis
KF147]
gi|13959507|sp|Q9CDM8|RS6_LACLA RecName: Full=30S ribosomal protein S6
gi|12725255|gb|AAK06289.1|AE006448_7 30S ribosomal protein S6 [Lactococcus lactis subsp. lactis
Il1403]
gi|281376499|gb|ADA65985.1| SSU ribosomal protein S6P [Lactococcus lactis subsp. lactis
KF147]
gi|326407765|gb|ADZ64836.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. lactis CV56]
Length = 97
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ ++ +NG + R +AY I R+ Y
Sbjct: 1 MTKYEILYIIRPNIDEEAKAALVERFDGILTDNGAANLESKDWEKRKLAYEINDFREGIY 60
Query: 61 VFMNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ A+ E R +I+ ++LR + + V++
Sbjct: 61 HIATFEAETTSEALSEFDRLAKINLDILRHMIVKVEA 97
>gi|124361112|gb|ABN09084.1| Ribosomal protein S6 [Medicago truncatula]
Length = 294
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V+L+ + + + + + Q ++E G V ++ GMR +AY+I+K A+Y+
Sbjct: 134 RHYEIVYLIHEKHAEE-VVAVNEKVQDFLREKKGRVWRFSDWGMRKLAYKIQKANNAHYI 192
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
MN I+E+K + DE V+R L + D
Sbjct: 193 LMNFEMDAKYINELKTLLDRDERVIRHLVIKRDEAITE 230
>gi|256389567|ref|YP_003111131.1| 30S ribosomal protein S6 [Catenulispora acidiphila DSM 44928]
gi|256355793|gb|ACU69290.1| ribosomal protein S6 [Catenulispora acidiphila DSM 44928]
Length = 101
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RKN 55
M+ YE + +L D+ + I + + +I++ GG + + G R +AY I +K
Sbjct: 1 MRQYEVMVILDPDLDERSIAPALEGFLKVIRDLGGSIEKNDIWGRRRLAYEIKTKSGKKV 60
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ Y +++ + P A+ E R+ + E V+R+ + D
Sbjct: 61 SEGIYAVVDVQATPDAVKEFDRQANLSETVVRTKVIRPD 99
>gi|108803691|ref|YP_643628.1| 30S ribosomal protein S6P [Rubrobacter xylanophilus DSM 9941]
gi|108764934|gb|ABG03816.1| SSU ribosomal protein S6P [Rubrobacter xylanophilus DSM 9941]
Length = 147
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVR-LVNELGMRTIAYRIRKNRKAYY 60
++YE + ++ ++ +Q++ T+ +++++I+ GGEV N G R +AY I AYY
Sbjct: 36 RIYEVMLIIIPELDEEQVQSTVSRFRTVIERTGGEVVGEPNHWGKRKLAYEIDHRSDAYY 95
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V M + + E+KR +R+ ++VLR + + +
Sbjct: 96 VVMEFTAGDRTLVELKRILRVSDDVLRHMIVKL 128
>gi|303249179|ref|ZP_07335417.1| ribosomal protein S6 [Desulfovibrio fructosovorans JJ]
gi|302489402|gb|EFL49351.1| ribosomal protein S6 [Desulfovibrio fructosovorans JJ]
Length = 102
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 54/93 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL +++++ ++ I Q +++ + V+E GMR +AY + K + +Y
Sbjct: 1 MRKYEALLLLSPELAAENRQEIIENLQGVLERQQATMLTVDEWGMRELAYPVEKKTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ A+P AI E +R +RI + +++ +T+ +
Sbjct: 61 TRLEFAAPAPAIAEFERIVRITDGIMKFITVKL 93
>gi|288921428|ref|ZP_06415706.1| ribosomal protein S6 [Frankia sp. EUN1f]
gi|288347162|gb|EFC81461.1| ribosomal protein S6 [Frankia sp. EUN1f]
Length = 108
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 56/92 (60%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L ++ + + ++ QY +++++ GG V V+ G R ++Y I K+ + Y
Sbjct: 3 RHYELMVILDPELEERTVAPSLDQYLNVVRQGGGVVEKVDVWGRRRLSYEIAKSYEGIYA 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+++ + PA + E+ R++ ++E+V+R+ + +
Sbjct: 63 VIDLHTEPAIVAELDRQLVLNESVIRTKVIRL 94
>gi|257462523|ref|ZP_05626935.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
gi|317060178|ref|ZP_07924663.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
gi|313685854|gb|EFS22689.1| SSU ribosomal protein S6P [Fusobacterium sp. D12]
Length = 94
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++ + + I + L+ NG + + G R +AY I K + +Y
Sbjct: 1 MKKYEIMYIINPTVLEEGRDSVIEKISELLTSNGANILKTEKWGERKLAYLIDKKKTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E V+R + + D
Sbjct: 61 VLTTFEIDGTKLAEVESKLNITEEVMRYIIVKQD 94
>gi|73663682|ref|YP_302463.1| 30S ribosomal protein S6 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82581625|sp|Q49UQ0|RS6_STAS1 RecName: Full=30S ribosomal protein S6
gi|72496197|dbj|BAE19518.1| 30S ribosomal protein S6 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 101
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ +G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIIRPNIEEDAKKAVVERFNGILASHGSEVLEAKDWGKRRLAYEINDFSEGYY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ I + A E +R +I ++V+R + + D +
Sbjct: 61 NIVRIQTADNEATDEFQRLAKISDDVIRYIVIREDEDKT 99
>gi|325261130|ref|ZP_08127868.1| ribosomal protein S6 [Clostridium sp. D5]
gi|324032584|gb|EGB93861.1| ribosomal protein S6 [Clostridium sp. D5]
Length = 95
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + ++L+ GG V V+E G R AY I+K ++ YY
Sbjct: 1 MNKYELAVVVSAKIEDDARTEVVEKVKALVLRFGGNVTDVDEWGKRRFAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E+++++RI +NVLR L + ++
Sbjct: 61 YFIHFESDSTVPGEVEQRIRIMDNVLRYLCVRQEA 95
>gi|225016119|ref|ZP_03705352.1| hypothetical protein CLOSTMETH_00063 [Clostridium methylpentosum
DSM 5476]
gi|224951116|gb|EEG32325.1| hypothetical protein CLOSTMETH_00063 [Clostridium methylpentosum
DSM 5476]
Length = 97
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L + I+ + +++ LI+++ + V+E G R +AY I YYV
Sbjct: 8 YETILILNTKLGDDGIQTLVEKFKKLIEDH-ATLESVDEWGKRRLAYEIEDETDGYYVLF 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N S P+ E+ R +I + V+RSL + D
Sbjct: 67 NFTSEPSFPAELDRIYKITDGVMRSLIIAKD 97
>gi|222617304|gb|EEE53436.1| hypothetical protein OsJ_36520 [Oryza sativa Japonica Group]
Length = 257
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + ++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHEDRVEE-VEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE ++R L + D
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAITE 226
>gi|324998550|ref|ZP_08119662.1| 30S ribosomal protein S6 [Pseudonocardia sp. P1]
Length = 98
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 53/88 (60%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + ++ ++ Q+ ++++ +GG + + G R +AY I+K +A Y + IA
Sbjct: 1 MVILDGSLDERTVQPSLEQFLTVVKSDGGSIEKIEVWGKRRLAYEIKKQGEAIYAVVEIA 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ PA + E+ R++ ++E+VLR+ L D
Sbjct: 61 AEPATVAELDRQLGLNESVLRTKVLRKD 88
>gi|313891894|ref|ZP_07825496.1| ribosomal protein S6 [Dialister microaerophilus UPII 345-E]
gi|329121956|ref|ZP_08250569.1| 30S ribosomal protein S6 [Dialister micraerophilus DSM 19965]
gi|313119669|gb|EFR42859.1| ribosomal protein S6 [Dialister microaerophilus UPII 345-E]
gi|327467402|gb|EGF12901.1| 30S ribosomal protein S6 [Dialister micraerophilus DSM 19965]
Length = 94
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+++ + IK Q I +NGG V V+E G R +AY ++K + YY
Sbjct: 1 MNKYEVMFIVK-VSDEEAIKSAGKLVQDTIVKNGGTVEKVDEWGRRQLAYEVKKQTEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ P I E+ R ++I E+++R + + D
Sbjct: 60 FVIDFTMKPENIKELDRVIKIRESIIRHIIVKQD 93
>gi|229824645|ref|ZP_04450714.1| hypothetical protein GCWU000282_01992 [Catonella morbi ATCC
51271]
gi|229786016|gb|EEP22130.1| hypothetical protein GCWU000282_01992 [Catonella morbi ATCC
51271]
Length = 99
Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R D++ K+ + ++ S++ ENG EV + + AY I ++ Y
Sbjct: 6 KYEILYIIRPDLTDDAKKELVERFDSILTENGTEVVESKDWAKKRFAYEINDYKEGIYHI 65
Query: 63 MNIASPPAA-IHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A I+E R +I+ ++LR + + V++
Sbjct: 66 VNVVAENAQGINEFDRLAKINRDILRHMIVKVEA 99
>gi|167773046|ref|ZP_02445099.1| hypothetical protein ANACOL_04435 [Anaerotruncus colihominis DSM
17241]
gi|167664979|gb|EDS09109.1| hypothetical protein ANACOL_04435 [Anaerotruncus colihominis DSM
17241]
Length = 117
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V +L + + + ++ +LI +N E+ V+ G R +AY + YYV
Sbjct: 6 ANYETVMVLSMKNGEEGVNTLVEKFNTLIADN-AEITKVDTWGQRALAYPMNDETVGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+N S P E+ R +I + VLRSL + + E+ P
Sbjct: 65 VINFTSKPDFPAELDRIYKITDGVLRSLIVAKEPEEEKPAPVAADEQ 111
>gi|218961879|ref|YP_001741654.1| 30S ribosomal protein S6 [Candidatus Cloacamonas acidaminovorans]
gi|167730536|emb|CAO81448.1| 30S ribosomal protein S6 [Candidatus Cloacamonas acidaminovorans]
Length = 95
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L +S+ + +L+ ENGGE+ ++ G R +AY I+K R+ YY
Sbjct: 5 YELMVILVPTLSADEANAINDSLMALVTENGGEIIKIDPWGKRMLAYPIKKFREGYYFVD 64
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTL 91
I ++K I+EN++R L +
Sbjct: 65 YFRVDSLVIKKLKALFNINENIIRYLFV 92
>gi|116619043|ref|YP_819414.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097890|gb|ABJ63041.1| SSU ribosomal protein S6P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 98
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ +++ +NG ++ + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLDADAKKTLVERFDAILTDNGATIQKSADWATRRFAYEIAGYREGTYHII 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVDSH 96
N + AI+E R +I +++LR + + D+
Sbjct: 65 NFTAEDDKAINEFDRLAKISQDILRHMIVKRDAE 98
>gi|68537161|ref|YP_251866.1| 30S ribosomal protein S6 [Corynebacterium jeikeium K411]
gi|91207910|sp|Q4JSF9|RS6_CORJK RecName: Full=30S ribosomal protein S6
gi|68264760|emb|CAI38248.1| 30S ribosomal protein S6 [Corynebacterium jeikeium K411]
Length = 95
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 48/94 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ +Y ++++ G V V+ G R + Y I K + Y
Sbjct: 1 MRQYEMMIIIDPSQDERTVAPSLDKYLDIVRKENGSVEKVDIWGKRRLEYPINKKDEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V +++ A + E+ R + I++ +LR+ L D
Sbjct: 61 VVLDLKCESATVLEIDRLLNINDQILRTKVLRKD 94
>gi|224475520|ref|YP_002633126.1| 30S ribosomal protein S6 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254765453|sp|B9DIB8|RS6_STACT RecName: Full=30S ribosomal protein S6
gi|222420127|emb|CAL26941.1| 30S ribosomal protein S6 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 98
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I + K + ++ ++ +G E+ + G R +AY I ++ YY
Sbjct: 1 MRTYEIMYVVRPNIEDEARKALVERFNGILTNDGAEIIEEKDWGKRRLAYEIEDFKEGYY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ I + A E +R +I+++++R + + D
Sbjct: 61 YIVRINTENSEATDEFQRLAKINDDIIRYIVIREDE 96
>gi|160892969|ref|ZP_02073757.1| hypothetical protein CLOL250_00506 [Clostridium sp. L2-50]
gi|156865052|gb|EDO58483.1| hypothetical protein CLOL250_00506 [Clostridium sp. L2-50]
Length = 96
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + ++ I++ + V + G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVNAKIDEDARTAAVEKVKAYIEKANATITNVEDCGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E VLR L + +D+
Sbjct: 61 YFIQFDAEADVPAQLEANVRIMEPVLRYLCVRLDAE 96
>gi|154488161|ref|ZP_02029278.1| hypothetical protein BIFADO_01733 [Bifidobacterium adolescentis
L2-32]
gi|212715364|ref|ZP_03323492.1| hypothetical protein BIFCAT_00258 [Bifidobacterium catenulatum
DSM 16992]
gi|225352540|ref|ZP_03743563.1| hypothetical protein BIFPSEUDO_04163 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|154083634|gb|EDN82679.1| hypothetical protein BIFADO_01733 [Bifidobacterium adolescentis
L2-32]
gi|212661670|gb|EEB22245.1| hypothetical protein BIFCAT_00258 [Bifidobacterium catenulatum
DSM 16992]
gi|225156734|gb|EEG70128.1| hypothetical protein BIFPSEUDO_04163 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 95
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY + + GG V ++ G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N ++ PA E+ R + ++E+V+R+ L
Sbjct: 65 VNYSAEPATSDELDRLLNLNESVIRTKILR 94
>gi|226323518|ref|ZP_03799036.1| hypothetical protein COPCOM_01293 [Coprococcus comes ATCC 27758]
gi|225208202|gb|EEG90556.1| hypothetical protein COPCOM_01293 [Coprococcus comes ATCC 27758]
Length = 95
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + I + ++L+ GG + V+E G + +AY I+K ++AYY
Sbjct: 1 MSKYELAVVVSAKLEDDARAEVIEKVKALVTRFGGNITDVDEWGKKRLAYEIQKMKEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F++ S E++ ++RI + V+R L + ++
Sbjct: 61 YFIHFESETTTPGEIEERIRIMDGVIRYLCVKQEA 95
>gi|332704306|ref|ZP_08424394.1| 30S ribosomal protein S6 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554455|gb|EGJ51499.1| 30S ribosomal protein S6 [Desulfovibrio africanus str. Walvis
Bay]
Length = 102
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 57/99 (57%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L +++++ K+ + +++ G+ +++E G R +AY + K + +Y
Sbjct: 1 MRKYETLLLFSPELTTENRKEILDNLGAIVAREQGQTLMLDEWGSRELAYAVNKFTRGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + A P I E++R +RI + +L+ +T+ +D + Q+
Sbjct: 61 VRLEYAGPSPLIAELERNIRITDGILKFVTVKLDENFQA 99
>gi|116491825|ref|YP_803560.1| SSU ribosomal protein S6P [Pediococcus pentosaceus ATCC 25745]
gi|116101975|gb|ABJ67118.1| SSU ribosomal protein S6P [Pediococcus pentosaceus ATCC 25745]
Length = 94
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++ ++ + ++ ++ +NG E+ + R +AY I Y
Sbjct: 1 MKNYEITYIIAPNLDDAAKTALVDRFDKILTDNGAEIVDSKDWSKRRLAYEIGGFNDGIY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTL 91
+N+ + A++E R +I + +LR + +
Sbjct: 61 HIVNVKASDDEALNEFDRLSKIADGILRHMIV 92
>gi|163815609|ref|ZP_02206982.1| hypothetical protein COPEUT_01784 [Coprococcus eutactus ATCC
27759]
gi|158449246|gb|EDP26241.1| hypothetical protein COPEUT_01784 [Coprococcus eutactus ATCC
27759]
Length = 96
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + +S I++ + VNE G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVSAKIDEEARTAVVDKVKSYIEKANATITDVNECGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E+VLR L + +D+
Sbjct: 61 YFIQFDADADVPAQLEANIRIMESVLRYLCVRLDAE 96
>gi|312144684|ref|YP_003996130.1| ribosomal protein S6 [Halanaerobium sp. 'sapolanicus']
gi|311905335|gb|ADQ15776.1| ribosomal protein S6 [Halanaerobium sp. 'sapolanicus']
Length = 99
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 52/94 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE F+L+ D+ ++ + + + ++ I ++ GE+ V+ G R +AY I+ R Y
Sbjct: 6 RTYETTFVLKPDLEDEEKEQILTRVKNTILDHDGEITEVDAWGKRQLAYEIKDYRSGDYT 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + + + E++R +I + V+R L + +S
Sbjct: 66 ILEMNAKTSVVKELERIFKIMDGVIRYLVVKKES 99
>gi|256425942|ref|YP_003126595.1| ribosomal protein S6 [Chitinophaga pinensis DSM 2588]
gi|256040850|gb|ACU64394.1| ribosomal protein S6 [Chitinophaga pinensis DSM 2588]
Length = 116
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + +S + K ++ LI+ENGGEV N G+R++AY I+K Y
Sbjct: 1 MN-YELMVIFTPVLSEEDYKAAQKKFADLIKENGGEVTHENPWGLRSLAYPIQKKTTGMY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + ++P ++K ++ DENVLR +T +D +
Sbjct: 60 LVLEYSAPSDLNEKLKIQLNRDENVLRHMTTALDKY 95
>gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC
15703]
gi|118766085|dbj|BAF40264.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC
15703]
Length = 96
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY + + GG V ++ G R +AY I + YV
Sbjct: 6 KYELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTEGNYVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N ++ PA E+ R + ++E+V+R+ L
Sbjct: 66 VNYSAEPATSDELDRLLNLNESVIRTKILR 95
>gi|256827568|ref|YP_003151527.1| 30S ribosomal protein S6P [Cryptobacterium curtum DSM 15641]
gi|256583711|gb|ACU94845.1| SSU ribosomal protein S6P [Cryptobacterium curtum DSM 15641]
Length = 97
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++ + I + + ++I ++ G V V + G R +AY I + Y
Sbjct: 1 MKAYELLYFVAPSIDEETRTAVSTRINTVITDDKGVVDNVEQWGKRKLAYEIEGLNEGDY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ + P +I E+ R +RI + V R + +
Sbjct: 61 TLVDFHADPNSIAELDRVLRITDAVKRHMIVRR 93
>gi|303326564|ref|ZP_07357007.1| ribosomal protein S6 [Desulfovibrio sp. 3_1_syn3]
gi|302864480|gb|EFL87411.1| ribosomal protein S6 [Desulfovibrio sp. 3_1_syn3]
Length = 102
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 54/93 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + ++I+ GG + V+ GMR +AY + K + YY
Sbjct: 1 MRKFETLLLLSPELSAENREGILNALVAIIEREGGVMTEVDHWGMRDLAYPVHKLMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + +P A + E++R +RI + + + +T+ +
Sbjct: 61 VRLVYDAPAALVAELERNIRITDGIFKFVTVKL 93
>gi|259500771|ref|ZP_05743673.1| 30S ribosomal protein S6 [Lactobacillus iners DSM 13335]
gi|302190778|ref|ZP_07267032.1| 30S ribosomal protein S6 [Lactobacillus iners AB-1]
gi|309804070|ref|ZP_07698151.1| ribosomal protein S6 [Lactobacillus iners LactinV 11V1-d]
gi|309804877|ref|ZP_07698939.1| ribosomal protein S6 [Lactobacillus iners LactinV 09V1-c]
gi|309805926|ref|ZP_07699958.1| ribosomal protein S6 [Lactobacillus iners LactinV 03V1-b]
gi|309807788|ref|ZP_07701720.1| ribosomal protein S6 [Lactobacillus iners LactinV 01V1-a]
gi|309809795|ref|ZP_07703649.1| ribosomal protein S6 [Lactobacillus iners SPIN 2503V10-D]
gi|312871257|ref|ZP_07731355.1| ribosomal protein S6 [Lactobacillus iners LEAF 3008A-a]
gi|312872810|ref|ZP_07732875.1| ribosomal protein S6 [Lactobacillus iners LEAF 2062A-h1]
gi|312873316|ref|ZP_07733371.1| ribosomal protein S6 [Lactobacillus iners LEAF 2052A-d]
gi|312874765|ref|ZP_07734784.1| ribosomal protein S6 [Lactobacillus iners LEAF 2053A-b]
gi|315654137|ref|ZP_07907053.1| 30S ribosomal protein S6 [Lactobacillus iners ATCC 55195]
gi|325912274|ref|ZP_08174671.1| ribosomal protein S6 [Lactobacillus iners UPII 143-D]
gi|325913656|ref|ZP_08176018.1| ribosomal protein S6 [Lactobacillus iners UPII 60-B]
gi|329919744|ref|ZP_08276695.1| ribosomal protein S6 [Lactobacillus iners SPIN 1401G]
gi|259167465|gb|EEW51960.1| 30S ribosomal protein S6 [Lactobacillus iners DSM 13335]
gi|308163838|gb|EFO66104.1| ribosomal protein S6 [Lactobacillus iners LactinV 11V1-d]
gi|308165816|gb|EFO68037.1| ribosomal protein S6 [Lactobacillus iners LactinV 09V1-c]
gi|308167702|gb|EFO69849.1| ribosomal protein S6 [Lactobacillus iners LactinV 03V1-b]
gi|308168890|gb|EFO70976.1| ribosomal protein S6 [Lactobacillus iners LactinV 01V1-a]
gi|308169974|gb|EFO72013.1| ribosomal protein S6 [Lactobacillus iners SPIN 2503V10-D]
gi|311089510|gb|EFQ47935.1| ribosomal protein S6 [Lactobacillus iners LEAF 2053A-b]
gi|311091196|gb|EFQ49585.1| ribosomal protein S6 [Lactobacillus iners LEAF 2052A-d]
gi|311091852|gb|EFQ50231.1| ribosomal protein S6 [Lactobacillus iners LEAF 2062A-h1]
gi|311093271|gb|EFQ51617.1| ribosomal protein S6 [Lactobacillus iners LEAF 3008A-a]
gi|315488833|gb|EFU78479.1| 30S ribosomal protein S6 [Lactobacillus iners ATCC 55195]
gi|325475933|gb|EGC79102.1| ribosomal protein S6 [Lactobacillus iners UPII 143-D]
gi|325477015|gb|EGC80165.1| ribosomal protein S6 [Lactobacillus iners UPII 60-B]
gi|328937091|gb|EGG33519.1| ribosomal protein S6 [Lactobacillus iners SPIN 1401G]
Length = 98
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI K I ++ ++ +NG + + G R AY I K R+ Y
Sbjct: 5 KYEITYIIKPDIDEDSKKALIERFDKVVTDNGAQELESKDWGKRHFAYEIEKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + AA+ E R RID +LRS+T+ +D
Sbjct: 65 LTFVAENAAAVDEFGRLSRIDGQILRSMTVKLDK 98
>gi|90960997|ref|YP_534913.1| 30S ribosomal protein S6 [Lactobacillus salivarius UCC118]
gi|301300466|ref|ZP_07206665.1| ribosomal protein S6 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|90820191|gb|ABD98830.1| SSU ribosomal protein S6P [Lactobacillus salivarius UCC118]
gi|300851913|gb|EFK79598.1| ribosomal protein S6 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 96
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ I + ++ ++++ +G E+ + R AY I + Y
Sbjct: 1 MTNYEITYIISPAIDEAAKTALVERFDNILKNDGAEIVDSKDWSKRRFAYEIGGFSEGIY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
+NI + AI+E R +I++ +LR + + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIVKRE 95
>gi|326693084|ref|ZP_08230089.1| ribosomal protein S6 [Leuconostoc argentinum KCTC 3773]
Length = 98
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R DI K + ++ ++ +NG + + R AY I R+ Y +
Sbjct: 5 YELTYIVRPDIEMDAKKALVERFDGILTDNGATISKSADWATRRFAYEIAGYREGVYHVI 64
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + AAI+E R +I +++LR + + D+
Sbjct: 65 DFTAEDDAAINEFDRLAKISQDILRHMIVKRDAE 98
>gi|293375550|ref|ZP_06621824.1| ribosomal protein S6 [Turicibacter sanguinis PC909]
gi|325845125|ref|ZP_08168436.1| ribosomal protein S6 [Turicibacter sp. HGF1]
gi|292645767|gb|EFF63803.1| ribosomal protein S6 [Turicibacter sanguinis PC909]
gi|325488867|gb|EGC91265.1| ribosomal protein S6 [Turicibacter sp. HGF1]
Length = 95
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R ++ + K I + ++ G E+ + E GMR +AY I K YY
Sbjct: 1 MRKYEIMYIVRPNLEEEGRKAVIEGFNTMFTNMGAEIVEMKEWGMRDLAYAIEDFTKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + + S A +E R I E+V+R + + +
Sbjct: 61 VVLTVNSSIEAKNEFDRLAGISEDVIRYIAIKEEE 95
>gi|315605478|ref|ZP_07880516.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312824|gb|EFU60903.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 96
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L I + + T+ +Y + + GG V V+ G R +AY I K + Y
Sbjct: 1 MRNYELMVILDPSIDERTVAPTMEKYLAPVGAAGGSVENVDIWGKRRLAYDILKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
V +++ + P E+ R+M IDE +LR+ L D+H
Sbjct: 61 VVIDMTTTPEVALEINRRMGIDETILRTKLLRPDAH 96
>gi|256545550|ref|ZP_05472910.1| 30S ribosomal protein S6 [Anaerococcus vaginalis ATCC 51170]
gi|256398761|gb|EEU12378.1| 30S ribosomal protein S6 [Anaerococcus vaginalis ATCC 51170]
Length = 94
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + + ++S ++ ++ ++ +I E+ GEV V++ G R +AY I ++ YY
Sbjct: 1 MNNYEAVLIYKPEVSDEERNKSLEIFKGIIAES-GEVESVDDWGKRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + I E +R++RI + +LR + + +
Sbjct: 60 YIVDFKASGDHIKEFERRLRISDLILRYMVIRKE 93
>gi|185535000|gb|ACC77846.1| 30S ribosomal protein S6 [Staphylococcus xylosus]
Length = 101
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKAVVERFNGILASQGSEVLEAKDWGKRRLAYEINDFSEGYY 60
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ I S A E +R +I ++V+R + + D +
Sbjct: 61 NIVRIQTSDNEATDEFQRLAKISDDVIRYIVIREDEDKT 99
>gi|110644557|ref|YP_672287.1| 30S ribosomal subunit protein S6 [Escherichia coli 536]
gi|110346149|gb|ABG72386.1| 30S ribosomal subunit protein S6 [Escherichia coli 536]
Length = 101
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 43 LGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
G R +AY I K KA+YV MN+ +P I E++ R ++ V+RS+ + +
Sbjct: 12 WGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASP 71
Query: 103 TIQ-RHDRDDRNDRFPRDRNVDRKQHVSEE 131
++ + +R +R D F + D + SEE
Sbjct: 72 MVKAKDERRERRDDFANETADDAEAGDSEE 101
>gi|209527733|ref|ZP_03276229.1| ribosomal protein S6 [Arthrospira maxima CS-328]
gi|209491854|gb|EDZ92213.1| ribosomal protein S6 [Arthrospira maxima CS-328]
Length = 116
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR D++ +Q++ +YQ +++E+G + V LG R +AY I K R+ Y+ M
Sbjct: 6 YETMYILRSDLNEEQLEAARAKYQDILREHGAQNLEVQNLGKRRLAYDIDKYREGIYIQM 65
Query: 64 NIA-SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N I M+R MRI +V+R LT+ D
Sbjct: 66 NYEGGDSDQIKVMERAMRIGGDVIRYLTIKQD 97
>gi|172041664|ref|YP_001801378.1| 30S ribosomal protein S6 [Corynebacterium urealyticum DSM 7109]
gi|226703444|sp|B1VIZ8|RS6_CORU7 RecName: Full=30S ribosomal protein S6
gi|171852968|emb|CAQ05944.1| 30S ribosomal protein S6 [Corynebacterium urealyticum DSM 7109]
Length = 95
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ +Y ++++E G V V+ G R Y I+K + Y
Sbjct: 1 MRQYEVMIIVDPSQDERTVAPSLDKYLNIVREEKGSVDKVDVWGKRRFEYPIQKKEEGVY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +++ + E+ R + +++NVLR+ L D
Sbjct: 61 IVLDLTCESDTVRELDRVLNLNDNVLRTKVLRKDK 95
>gi|238925609|ref|YP_002939126.1| 30S ribosomal protein S6 [Eubacterium rectale ATCC 33656]
gi|238877285|gb|ACR76992.1| 30S ribosomal protein S6 [Eubacterium rectale ATCC 33656]
Length = 107
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 12 MNKYELALVVSAKIEDDARTAVVEKAKEYITRAGGTVTEVEEAGKKRLAYEIQHMTEAFY 71
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + E+++ +RI +NVLR L + D
Sbjct: 72 YFIQFDAEGTVPAEIEQDVRIMDNVLRFLCVRKDEA 107
>gi|227891675|ref|ZP_04009480.1| 30S ribosomal protein S6 [Lactobacillus salivarius ATCC 11741]
gi|227866478|gb|EEJ73899.1| 30S ribosomal protein S6 [Lactobacillus salivarius ATCC 11741]
Length = 96
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ I + ++ ++++ +G E+ + R AY I + Y
Sbjct: 1 MTNYEITYIISPAIDEAAKTALVERFDNILKNDGAEIIDSKDWSKRRFAYEIGGFSEGIY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
+NI + AI+E R +I++ +LR + + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIVKRE 95
>gi|46579369|ref|YP_010177.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603073|ref|YP_967473.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris DP4]
gi|61215612|sp|Q72DH3|RS6_DESVH RecName: Full=30S ribosomal protein S6
gi|166226826|sp|A1VF30|RS6_DESVV RecName: Full=30S ribosomal protein S6
gi|46448783|gb|AAS95436.1| ribosomal protein S6 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563302|gb|ABM29046.1| SSU ribosomal protein S6P [Desulfovibrio vulgaris DP4]
gi|311233194|gb|ADP86048.1| ribosomal protein S6 [Desulfovibrio vulgaris RCH1]
Length = 101
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 52/99 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + + +++ G + + GMR +AY +RK + YY
Sbjct: 1 MRKFETLLLLSPELAADAREALLTTLSGVVEREQGSMITADHWGMRDLAYPVRKQMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + +P A + E++R +RI + + + +T+ + +
Sbjct: 61 VRLEYTAPGATVAELERIIRISDGIFKFVTVKLADAVEE 99
>gi|158319029|ref|YP_001511537.1| 30S ribosomal protein S6 [Frankia sp. EAN1pec]
gi|158114434|gb|ABW16631.1| ribosomal protein S6 [Frankia sp. EAN1pec]
Length = 108
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 56/92 (60%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L ++ + + ++ QY +++++ GG V V+ G R ++Y I K+ + Y
Sbjct: 3 RHYELMVILDSELEERTVAPSLDQYLNVVRQGGGVVEKVDVWGRRRLSYEIAKSFEGIYA 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+++ + PA + E+ R++ ++E+V+R+ + +
Sbjct: 63 VIDLHTEPAVVAELDRQLVLNESVIRTKVIRL 94
>gi|212550374|ref|YP_002308691.1| 30S ribosomal protein S6 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226703416|sp|B6YQ08|RS6_AZOPC RecName: Full=30S ribosomal protein S6
gi|212548612|dbj|BAG83280.1| 30S ribosomal protein S6 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 112
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 55/112 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE VF+L +S +Q+K+T+ +++ ++ E+ G+R ++Y I++ +Y
Sbjct: 1 MNNYEAVFILTPVLSDEQVKETVNKFKDILIAEEAEIINEENWGLRKLSYPIQRKTTGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+ S I +++ + R DE VLR LT + L + ++ +
Sbjct: 61 FLLEFKSDSTIISKLETQFRRDEKVLRFLTFRQNKVFMEYALKRRNKLKETK 112
>gi|206890158|ref|YP_002248634.1| ribosomal protein S6 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742096|gb|ACI21153.1| ribosomal protein S6 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 120
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 53/98 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V LL ++ +++++ + + SLI ENGGE+ V+ G + +AY++ + YYV
Sbjct: 3 NFYEKVVLLLPTLTEEEVQEAVKKISSLIVENGGEILKVDNWGKKKLAYKLNRQTMGYYV 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+P +I +M+ ++ + V + + + H+ +
Sbjct: 63 LFLFKAPALSIKKMEEFYKVYDPVFKFMVFKLTKHQIA 100
>gi|218886446|ref|YP_002435767.1| 30S ribosomal protein S6 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226703454|sp|B8DRL2|RS6_DESVM RecName: Full=30S ribosomal protein S6
gi|218757400|gb|ACL08299.1| ribosomal protein S6 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 101
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 55/99 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + +G +++ G++ + GMR +AY ++K+ + YY
Sbjct: 1 MRKFETLLLLSPELAADAREALLGTLTGVVEREQGKMVAADHWGMRDLAYPVQKHMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + +P A+ E++R +RI + + + +T+ + +
Sbjct: 61 VRLEYLAPGEAVAEVERNIRISDGIFKFVTVKLADAVEE 99
>gi|116513139|ref|YP_812046.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. cremoris
SK11]
gi|125625231|ref|YP_001033714.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. cremoris
MG1363]
gi|123025089|sp|Q02VT9|RS6_LACLS RecName: Full=30S ribosomal protein S6
gi|166226975|sp|A2RNZ4|RS6_LACLM RecName: Full=30S ribosomal protein S6
gi|116108793|gb|ABJ73933.1| SSU ribosomal protein S6P [Lactococcus lactis subsp. cremoris
SK11]
gi|124494039|emb|CAL99039.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300072041|gb|ADJ61441.1| 30S ribosomal protein S6 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 97
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ +++ ENG + R +AY I R+ Y
Sbjct: 1 MTKYEILYIIRPNIDEEAKTALVERFDAILTENGAANLESKDWEKRKLAYEINDFREGIY 60
Query: 61 VFMNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ A+ E R +I+ ++LR + + V++
Sbjct: 61 HIATFEAETTSEALSEFDRLAKINLDILRHMIVKVEA 97
>gi|256826414|ref|YP_003150374.1| 30S ribosomal protein S6P [Kytococcus sedentarius DSM 20547]
gi|256689807|gb|ACV07609.1| SSU ribosomal protein S6P [Kytococcus sedentarius DSM 20547]
Length = 95
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 46/92 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ +I + + + + ++++ +GG V + G R +AY I+K + Y
Sbjct: 1 MRQYELMMIIDPEIDERTLPTMVEKLLTVVKTDGGSVDETDIWGRRRLAYDIQKKSEGLY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + E+ R++ ++E+VLR
Sbjct: 61 AVVTLTMGTDTAKELDRQLGLNESVLRFKIQR 92
>gi|21674944|ref|NP_663009.1| 30S ribosomal protein S6 [Chlorobium tepidum TLS]
gi|25009197|sp|Q8KAM1|RS6_CHLTE RecName: Full=30S ribosomal protein S6
gi|21648174|gb|AAM73351.1| ribosomal protein S6 [Chlorobium tepidum TLS]
Length = 131
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++ + I + + + + GG + V E+G R +AY IRK YY
Sbjct: 5 KQYECTVIIDGGLQDDAIAAVMELVKKTVTDKGGVINNVLEVGRRKMAYLIRKTSIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + P+ I E++R R +E +LR L + + SP L +++
Sbjct: 65 HIEFDAVPSVIAEIERVFRYEEAILRFLIIQL----SSPLLEMRKR 106
>gi|7670041|dbj|BAA94995.1| unnamed protein product [Arabidopsis thaliana]
Length = 356
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + + + ++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 162 MRHYEVVYLIHEKHAEE-VESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 220
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN ++E K + DE V+R L + D
Sbjct: 221 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITE 259
>gi|312869228|ref|ZP_07729400.1| ribosomal protein S6 [Lactobacillus oris PB013-T2-3]
gi|311095249|gb|EFQ53521.1| ribosomal protein S6 [Lactobacillus oris PB013-T2-3]
Length = 98
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + + ++ ++ +NG ++ + R AY I K + Y
Sbjct: 4 RKYEITYIIRPDIEESAKSELVDRFDKVLTDNGADIAESKDWSTRRFAYPIDKYTEGTYH 63
Query: 62 FMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + A++E R + +++LR + + +D+
Sbjct: 64 VVTLTTDTDEALNEFDRLSKFSDDILRHMIVKLDA 98
>gi|259502124|ref|ZP_05745026.1| 30S ribosomal protein S6 [Lactobacillus antri DSM 16041]
gi|259169937|gb|EEW54432.1| 30S ribosomal protein S6 [Lactobacillus antri DSM 16041]
Length = 98
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + + ++ ++ +NG ++ + R AY I K + Y
Sbjct: 4 RKYEITYIIRPDIEESAKSELVERFDKVLTDNGADIAESKDWSTRRFAYPIDKYTEGTYH 63
Query: 62 FMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + A++E R + +++LR + + +D+
Sbjct: 64 VVTLTTDTDEALNEFDRLSKFSDDILRHMIVKLDA 98
>gi|326802628|ref|YP_004320446.1| ribosomal protein S6 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651205|gb|AEA01388.1| ribosomal protein S6 [Aerococcus urinae ACS-120-V-Col10a]
Length = 100
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I S+ + + ++ ++ NG + + AY I R+ Y
Sbjct: 7 KYEVLYIIRPNIDSEAKEALVKRFDDILTSNGTTITKSEDWQKLRFAYEINDFREGVYHL 66
Query: 63 MNIASPPAA-IHEMKRKMRIDENVLRSLTLLVDS 95
+ + AA I E R +I++++LR + V++
Sbjct: 67 IECEAEDAAGIDEFNRLAKINDDILRHMITKVEA 100
>gi|94971563|ref|YP_593611.1| 30S ribosomal protein S6 [Candidatus Koribacter versatilis
Ellin345]
gi|166226790|sp|Q1IHW3|RS6_ACIBL RecName: Full=30S ribosomal protein S6
gi|94553613|gb|ABF43537.1| SSU ribosomal protein S6P [Candidatus Koribacter versatilis
Ellin345]
Length = 147
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 57/112 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F++R D++ + + + ++ + GG ++ V+++G R +AY + Y+
Sbjct: 3 RTYEVMFIVRPDLTDEDLDKLVSTLETQVGTAGGTIKSVDKMGKRRLAYEVSTFTDGMYI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
I A I E++R++R+ E V++ +T+ VD ++ D R
Sbjct: 63 LFTIEGEGALIKEVERRLRVQEQVIKFITVRVDEEQKRLAKVKAIRDTKVRG 114
>gi|163842245|ref|YP_001626650.1| 30S ribosomal protein S6 [Renibacterium salmoninarum ATCC 33209]
gi|162955721|gb|ABY25236.1| SSU ribosomal protein S6P [Renibacterium salmoninarum ATCC 33209]
Length = 95
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 50/88 (56%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ ++ ++ + ++ T+ ++ ++I +GG V V+ G R +AY I+K + Y +N
Sbjct: 1 MVIIDPEVEERTVEPTLQKFLNVITTDGGTVDKVDIWGRRRLAYDIKKKSEGIYAVVNFT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ PA E+ R++ ++E +LR+ + +
Sbjct: 61 AEPATAKELDRQLGLNETILRTKIIRPE 88
>gi|260891625|ref|ZP_05902888.1| ribosomal protein S6 [Leptotrichia hofstadii F0254]
gi|260858635|gb|EEX73135.1| ribosomal protein S6 [Leptotrichia hofstadii F0254]
Length = 94
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+L ++ ++ + + + + G G R +AY I+K YY
Sbjct: 1 MRNYEIMFILSTQLTDEEKQAGVEFVEKTLTAGGATEVKTEIWGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I+E++L+ + + D
Sbjct: 61 VLTTFQADGTQFTEIEAKLNINESLLKYMIVKND 94
>gi|323341107|ref|ZP_08081355.1| 30S ribosomal protein S6 [Lactobacillus ruminis ATCC 25644]
gi|323091528|gb|EFZ34152.1| 30S ribosomal protein S6 [Lactobacillus ruminis ATCC 25644]
Length = 96
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++ + D + ++ ++++ +G EV + R AY I + Y
Sbjct: 1 MTNYEITYIISPALDEAAKNDLVERFDNILKNDGAEVVDSKDWSKRRFAYEIGGFTEGVY 60
Query: 61 VFMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
+NI + AI+E R +I++ +LR + + +
Sbjct: 61 HIVNIKAENADAINEFDRLAKINDGILRHMIVKRE 95
>gi|116628690|ref|YP_813862.1| 30S ribosomal protein S6 [Lactobacillus gasseri ATCC 33323]
gi|238853345|ref|ZP_04643725.1| ribosomal protein S6 [Lactobacillus gasseri 202-4]
gi|282852322|ref|ZP_06261664.1| ribosomal protein S6 [Lactobacillus gasseri 224-1]
gi|300362672|ref|ZP_07058848.1| 30S ribosomal protein S6 [Lactobacillus gasseri JV-V03]
gi|311111571|ref|ZP_07712968.1| ribosomal protein S6 [Lactobacillus gasseri MV-22]
gi|122274312|sp|Q047E8|RS6_LACGA RecName: Full=30S ribosomal protein S6
gi|116094272|gb|ABJ59424.1| SSU ribosomal protein S6P [Lactobacillus gasseri ATCC 33323]
gi|238834033|gb|EEQ26290.1| ribosomal protein S6 [Lactobacillus gasseri 202-4]
gi|282556064|gb|EFB61684.1| ribosomal protein S6 [Lactobacillus gasseri 224-1]
gi|300353663|gb|EFJ69535.1| 30S ribosomal protein S6 [Lactobacillus gasseri JV-V03]
gi|311066725|gb|EFQ47065.1| ribosomal protein S6 [Lactobacillus gasseri MV-22]
Length = 98
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI K I ++ ++ +NG E + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDIDEDSKKALIDRFDKVVTDNGAEELESKDWGKRRFAYEIEKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + + E R RID VLRS+T+ +D
Sbjct: 65 MTFVAENSEPVDEFGRLSRIDNQVLRSMTVKLDK 98
>gi|294507375|ref|YP_003571433.1| 30S ribosomal protein S6 [Salinibacter ruber M8]
gi|294343703|emb|CBH24481.1| 30S ribosomal protein S6 [Salinibacter ruber M8]
Length = 140
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++ + Q+ D + + LI+ N G+V V+E G + +AY I + R YYV
Sbjct: 19 QYELTYVISGVVKQNQVDDIVRKVNHLIESNDGDVLEVDEWGNQRLAYEIDRKRSGYYVN 78
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
M +P + ++R++ I+++VLR LTL +D+ ++RH + R
Sbjct: 79 MYFQAPGELVPRLERELDINDDVLRYLTLRMDA-------KMKRHYEQRKKRR 124
>gi|304438790|ref|ZP_07398717.1| 30S ribosomal protein S6 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372713|gb|EFM26292.1| 30S ribosomal protein S6 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 94
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V + D+ + T + +++I+ + G++ V+E GMR +AY I +AYY
Sbjct: 1 MRKYEVVLMFYPDVEEETRVKTFDRLKNIIETH-GKIESVDEWGMRKLAYEIEYYTEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +N + PA + E R +I + V+R + + ++
Sbjct: 60 VLVNFEAEPATVKEFDRVAKILDPVMRHMVVAIEK 94
>gi|220905286|ref|YP_002480598.1| 30S ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254765235|sp|B8J3B0|RS6_DESDA RecName: Full=30S ribosomal protein S6
gi|219869585|gb|ACL49920.1| ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 102
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 52/93 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + + +I+ G + V+ GMR +AY +RK + YY
Sbjct: 1 MRKFETLLLLSPELSAENREGVVSTFTGIIEREKGVMEEVDNWGMRDLAYPVRKLMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + P + E++R +R+ + V + +T+ +
Sbjct: 61 VRLVYQGPAPLVAELERNIRMTDGVFKFVTVKL 93
>gi|118138636|pdb|2J5A|A Chain A, Folding Of S6 Structures With Divergent Amino-Acid
Composition: Pathway Flexibility Within Partly
Overlapping Foldons
Length = 110
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF ++ +S +++K Q + I++ GGE+ + GMR +AY I+K A Y
Sbjct: 8 RYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF 67
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ + P +E+ +++IDE+V+R L + + E
Sbjct: 68 LVQFKTENPQLPNELDFQLKIDEDVIRWLNIQIKESE 104
>gi|39995771|ref|NP_951722.1| 30S ribosomal protein S6 [Geobacter sulfurreducens PCA]
gi|61215651|sp|Q74FE4|RS6_GEOSL RecName: Full=30S ribosomal protein S6
gi|39982535|gb|AAR33995.1| ribosomal protein S6 [Geobacter sulfurreducens PCA]
gi|298504781|gb|ADI83504.1| ribosomal protein S6 [Geobacter sulfurreducens KN400]
Length = 117
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 51/92 (55%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE + +++ ++ ++K + +I G + + + G+R +AY ++K+ + Y
Sbjct: 3 RMYETIVIVQPELGDDELKGLTAKVTDIIGSFKGVLHRLEDWGVRKLAYPVKKSVRGRYY 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ I E++R++R+D+ VLR ++ +
Sbjct: 63 YVRFDGDAPLIAELERRLRLDDKVLRYQSVKL 94
>gi|295093123|emb|CBK82214.1| SSU ribosomal protein S6P [Coprococcus sp. ART55/1]
Length = 96
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + +S I++ + VNE G++ +AY I+K +AYY
Sbjct: 1 MNKYELTLVVSAKIDEEARTAVVDKVKSYIEKANATITEVNECGLKKLAYEIQKMGEAYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + +++ +RI E+VLR L + +D+
Sbjct: 61 YFIQFDAEAGVPAQLEANIRIMESVLRYLCVRLDAE 96
>gi|319789280|ref|YP_004150913.1| ribosomal protein S6 [Thermovibrio ammonificans HB-1]
gi|317113782|gb|ADU96272.1| ribosomal protein S6 [Thermovibrio ammonificans HB-1]
Length = 126
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 1 MK--LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
M+ YE V++LR +S ++ I + S ++ GGEV V++ G R +AY I K
Sbjct: 1 MREYYYEMVYILRPTMSDEETNAAIEKVNSYVERYGGEVLKVDKWGKRQLAYPINDYDKG 60
Query: 59 YYVFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+YV I + + M+ RI+E+V+R L + E
Sbjct: 61 FYVLEYIRTDKRDFVRNMENFFRINEDVIRFLLFRLKPSE 100
>gi|212704877|ref|ZP_03313005.1| hypothetical protein DESPIG_02944 [Desulfovibrio piger ATCC 29098]
gi|212671719|gb|EEB32202.1| hypothetical protein DESPIG_02944 [Desulfovibrio piger ATCC 29098]
Length = 129
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 53/98 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++S++ + + +++ G + V+ GMR +AY +RK + YY
Sbjct: 30 MRKFETLLLLSPELSAETREGILTALTGVVERENGVMEEVDHWGMRDLAYPVRKQMRGYY 89
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
V + +P + E++R +RI + + + +T+ + +
Sbjct: 90 VRLVYQAPAELVAELERNVRITDGIFKFVTVKLAEEVE 127
>gi|294787278|ref|ZP_06752531.1| ribosomal protein S6 [Parascardovia denticolens F0305]
gi|315227164|ref|ZP_07868951.1| 30S ribosomal protein S6 [Parascardovia denticolens DSM 10105]
gi|294484634|gb|EFG32269.1| ribosomal protein S6 [Parascardovia denticolens F0305]
gi|315119614|gb|EFT82747.1| 30S ribosomal protein S6 [Parascardovia denticolens DSM 10105]
Length = 98
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + + ++ + +K + QY + G V ++ G R +AY I + Y
Sbjct: 5 KYELMLIADPELDDRALKKLVDQYLETVTNEKGTVDDIDIWGRRKLAYEIDGKNEGSYAV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N + PA E+ R + ++E+++R+ L D
Sbjct: 65 VNYTAEPATSDELDRLLNLNESIIRTKILRKD 96
>gi|282902950|ref|ZP_06310843.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus C160]
gi|282597409|gb|EFC02368.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus C160]
Length = 98
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + +Y
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ + S A E +R +I ++++R + + D
Sbjct: 61 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIRED 95
>gi|254455872|ref|ZP_05069301.1| ribosomal protein S6 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082874|gb|EDZ60300.1| ribosomal protein S6 [Candidatus Pelagibacter sp. HTCC7211]
Length = 117
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LYEH + RQD S +IK +Y ++++N GE+ G+ ++Y I+KN+K +
Sbjct: 1 MNLYEHTIIARQDTSPSEIKQLTEKYSKIVEKNEGEIVKTENWGLINLSYLIKKNKKGSF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+ I I E+++ ID+ +LR LT+ V + +R D D +
Sbjct: 61 IHFKIKGKGNVIEELEKNEAIDKKLLRYLTVKVKKFDLDTNYFTKREDDDKKES 114
>gi|46447226|ref|YP_008591.1| 30S ribosomal protein S6 [Candidatus Protochlamydia amoebophila
UWE25]
gi|61216205|sp|Q6MAT3|RS6_PARUW RecName: Full=30S ribosomal protein S6
gi|46400867|emb|CAF24316.1| putative ribosomal protein S6 (BS9) [Candidatus Protochlamydia
amoebophila UWE25]
Length = 114
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 55/94 (58%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
LYE ++++ +S + + Q+ I +GGE++ ++E G R +AY I +R+ YY
Sbjct: 7 NLYEGMYVISATLSDDARHKALDRIQTGITGHGGEIKKLHEQGRRRLAYEIDGHREGYYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +P +AI ++ ++ ++E+++R +TL D
Sbjct: 67 LVYFTAPSSAISDLWQEYHLNEDLIRFITLRTDE 100
>gi|145218997|ref|YP_001129706.1| 30S ribosomal protein S6 [Prosthecochloris vibrioformis DSM 265]
gi|189045487|sp|A4SCJ5|RS6_PROVI RecName: Full=30S ribosomal protein S6
gi|145205161|gb|ABP36204.1| SSU ribosomal protein S6P [Chlorobium phaeovibrioides DSM 265]
Length = 133
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + + Q +I E GG ++ V ++G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEPIAEAMAMVQKVITEKGGSIKSVLDIGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + I E++R +R ++ +LR L + H +P L +++
Sbjct: 65 HIEFTADTPVIAEIERVLRYEDVLLRYLII----HLTTPLLEMRKR 106
>gi|291524155|emb|CBK89742.1| SSU ribosomal protein S6P [Eubacterium rectale DSM 17629]
gi|291527802|emb|CBK93388.1| SSU ribosomal protein S6P [Eubacterium rectale M104/1]
Length = 96
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 1 MNKYELALVVSAKIEDDARTAVVEKAKEYITRAGGTVTEVEEAGKKRLAYEIQHMTEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + E+++ +RI +NVLR L + D
Sbjct: 61 YFIQFDAEGTVPAEIEQDVRIMDNVLRFLCVRKDEA 96
>gi|15923355|ref|NP_370889.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926066|ref|NP_373599.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
N315]
gi|21282070|ref|NP_645158.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482595|ref|YP_039819.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485245|ref|YP_042466.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750077|ref|YP_415818.1| 30S ribosomal protein S6 [Staphylococcus aureus RF122]
gi|87161421|ref|YP_493080.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194147|ref|YP_498937.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266852|ref|YP_001245795.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JH9]
gi|150392898|ref|YP_001315573.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JH1]
gi|151220569|ref|YP_001331391.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978693|ref|YP_001440952.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161353537|ref|YP_185328.2| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
COL]
gi|161508637|ref|YP_001574296.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142673|ref|ZP_03567166.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316534|ref|ZP_04839747.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253730729|ref|ZP_04864894.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735108|ref|ZP_04869273.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005160|ref|ZP_05143761.2| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424509|ref|ZP_05600938.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427178|ref|ZP_05603580.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429814|ref|ZP_05606201.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 68-397]
gi|257432518|ref|ZP_05608881.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus E1410]
gi|257435420|ref|ZP_05611471.1| SSU ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M876]
gi|257794200|ref|ZP_05643179.1| 30S ribosomal protein S6 [Staphylococcus aureus A9781]
gi|258413515|ref|ZP_05681790.1| 30S ribosomal protein S6 [Staphylococcus aureus A9763]
gi|258421361|ref|ZP_05684288.1| SSU ribosomal protein S6 [Staphylococcus aureus A9719]
gi|258424582|ref|ZP_05687459.1| SSU ribosomal protein S6 [Staphylococcus aureus A9635]
gi|258436938|ref|ZP_05689278.1| ribosomal protein S6 [Staphylococcus aureus A9299]
gi|258444345|ref|ZP_05692679.1| ribosomal protein S6 [Staphylococcus aureus A8115]
gi|258444882|ref|ZP_05693203.1| ribosomal protein S6 [Staphylococcus aureus A6300]
gi|258448087|ref|ZP_05696216.1| ribosomal protein S6 [Staphylococcus aureus A6224]
gi|258453042|ref|ZP_05701035.1| ribosomal protein S6 [Staphylococcus aureus A5948]
gi|258455920|ref|ZP_05703875.1| ribosomal protein S6 [Staphylococcus aureus A5937]
gi|262048927|ref|ZP_06021807.1| 30S ribosomal protein S6 [Staphylococcus aureus D30]
gi|262052851|ref|ZP_06025036.1| 30S ribosomal protein S6 [Staphylococcus aureus 930918-3]
gi|269202013|ref|YP_003281282.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893525|ref|ZP_06301758.1| 30S ribosomal protein S6 [Staphylococcus aureus A8117]
gi|282907348|ref|ZP_06315196.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907691|ref|ZP_06315533.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912598|ref|ZP_06320394.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913223|ref|ZP_06321015.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M899]
gi|282915687|ref|ZP_06323458.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
D139]
gi|282921662|ref|ZP_06329380.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C427]
gi|282922338|ref|ZP_06330029.1| 30S ribosomal protein S6 [Staphylococcus aureus A9765]
gi|282922850|ref|ZP_06330540.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C101]
gi|282927419|ref|ZP_06335037.1| 30S ribosomal protein S6 [Staphylococcus aureus A10102]
gi|283768093|ref|ZP_06341008.1| small subunit ribosomal protein S6 [Staphylococcus aureus subsp.
aureus H19]
gi|283959803|ref|ZP_06377244.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023374|ref|ZP_06377772.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
132]
gi|293498272|ref|ZP_06666126.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509213|ref|ZP_06667931.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M809]
gi|293550477|ref|ZP_06673149.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M1015]
gi|294850013|ref|ZP_06790751.1| 30S ribosomal protein S6 [Staphylococcus aureus A9754]
gi|295405637|ref|ZP_06815447.1| 30S ribosomal protein S6 [Staphylococcus aureus A8819]
gi|295426899|ref|ZP_06819538.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275192|ref|ZP_06857699.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MR1]
gi|297209121|ref|ZP_06925520.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245544|ref|ZP_06929412.1| 30S ribosomal protein S6 [Staphylococcus aureus A8796]
gi|297588888|ref|ZP_06947529.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MN8]
gi|300911122|ref|ZP_07128571.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380331|ref|ZP_07363051.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54039533|sp|P66596|RS6_STAAW RecName: Full=30S ribosomal protein S6
gi|54039565|sp|P99142|RS6_STAAN RecName: Full=30S ribosomal protein S6
gi|54041976|sp|P66595|RS6_STAAM RecName: Full=30S ribosomal protein S6
gi|56749399|sp|Q6GCA7|RS6_STAAS RecName: Full=30S ribosomal protein S6
gi|56749428|sp|Q6GJV3|RS6_STAAR RecName: Full=30S ribosomal protein S6
gi|82581623|sp|Q5HIS9|RS6_STAAC RecName: Full=30S ribosomal protein S6
gi|91207792|sp|Q2YVJ2|RS6_STAAB RecName: Full=30S ribosomal protein S6
gi|122540227|sp|Q2G113|RS6_STAA8 RecName: Full=30S ribosomal protein S6
gi|123487277|sp|Q2FJP8|RS6_STAA3 RecName: Full=30S ribosomal protein S6
gi|166227388|sp|A7WY58|RS6_STAA1 RecName: Full=30S ribosomal protein S6
gi|189045588|sp|A6TYL8|RS6_STAA2 RecName: Full=30S ribosomal protein S6
gi|189045589|sp|A5IPU6|RS6_STAA9 RecName: Full=30S ribosomal protein S6
gi|189045590|sp|A6QE47|RS6_STAAE RecName: Full=30S ribosomal protein S6
gi|189045591|sp|A8YZJ1|RS6_STAAT RecName: Full=30S ribosomal protein S6
gi|13700279|dbj|BAB41577.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
N315]
gi|14246133|dbj|BAB56527.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203506|dbj|BAB94206.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MW2]
gi|49240724|emb|CAG39385.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49243688|emb|CAG42112.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82655608|emb|CAI80004.1| 30S ribosomal protein S6 [Staphylococcus aureus RF122]
gi|87127395|gb|ABD21909.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201705|gb|ABD29515.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147739921|gb|ABQ48219.1| SSU ribosomal protein S6P [Staphylococcus aureus subsp. aureus
JH9]
gi|149945350|gb|ABR51286.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus JH1]
gi|150373369|dbj|BAF66629.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156720828|dbj|BAF77245.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367446|gb|ABX28417.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725573|gb|EES94302.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726908|gb|EES95637.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273527|gb|EEV05629.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276809|gb|EEV08260.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280295|gb|EEV10882.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 68-397]
gi|257283397|gb|EEV13529.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus E1410]
gi|257286016|gb|EEV16132.1| SSU ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M876]
gi|257788172|gb|EEV26512.1| 30S ribosomal protein S6 [Staphylococcus aureus A9781]
gi|257839762|gb|EEV64231.1| 30S ribosomal protein S6 [Staphylococcus aureus A9763]
gi|257842785|gb|EEV67207.1| SSU ribosomal protein S6 [Staphylococcus aureus A9719]
gi|257845177|gb|EEV69214.1| SSU ribosomal protein S6 [Staphylococcus aureus A9635]
gi|257848729|gb|EEV72716.1| ribosomal protein S6 [Staphylococcus aureus A9299]
gi|257850604|gb|EEV74552.1| ribosomal protein S6 [Staphylococcus aureus A8115]
gi|257856200|gb|EEV79114.1| ribosomal protein S6 [Staphylococcus aureus A6300]
gi|257858602|gb|EEV81476.1| ribosomal protein S6 [Staphylococcus aureus A6224]
gi|257859252|gb|EEV82107.1| ribosomal protein S6 [Staphylococcus aureus A5948]
gi|257862132|gb|EEV84905.1| ribosomal protein S6 [Staphylococcus aureus A5937]
gi|259159252|gb|EEW44311.1| 30S ribosomal protein S6 [Staphylococcus aureus 930918-3]
gi|259162999|gb|EEW47561.1| 30S ribosomal protein S6 [Staphylococcus aureus D30]
gi|262074303|gb|ACY10276.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ED98]
gi|269939945|emb|CBI48317.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TW20]
gi|282315071|gb|EFB45457.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C101]
gi|282316077|gb|EFB46461.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
C427]
gi|282320503|gb|EFB50842.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
D139]
gi|282323323|gb|EFB53642.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M899]
gi|282324294|gb|EFB54610.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328596|gb|EFB58867.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330247|gb|EFB59768.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590743|gb|EFB95819.1| 30S ribosomal protein S6 [Staphylococcus aureus A10102]
gi|282593464|gb|EFB98459.1| 30S ribosomal protein S6 [Staphylococcus aureus A9765]
gi|282764211|gb|EFC04338.1| 30S ribosomal protein S6 [Staphylococcus aureus A8117]
gi|283461972|gb|EFC09056.1| small subunit ribosomal protein S6 [Staphylococcus aureus subsp.
aureus H19]
gi|283469672|emb|CAQ48883.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ST398]
gi|283789395|gb|EFC28222.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816087|gb|ADC36574.1| SSU ribosomal protein S6p [Staphylococcus aureus 04-02981]
gi|290919524|gb|EFD96600.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus M1015]
gi|291097203|gb|EFE27461.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467965|gb|EFF10473.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
M809]
gi|294823147|gb|EFG39578.1| 30S ribosomal protein S6 [Staphylococcus aureus A9754]
gi|294969712|gb|EFG45731.1| 30S ribosomal protein S6 [Staphylococcus aureus A8819]
gi|295129351|gb|EFG58978.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296886054|gb|EFH24988.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177530|gb|EFH36781.1| 30S ribosomal protein S6 [Staphylococcus aureus A8796]
gi|297577399|gb|EFH96112.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MN8]
gi|300887301|gb|EFK82497.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332102|gb|ADL22295.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750237|gb|ADL64414.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341312|gb|EFM07231.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312436520|gb|ADQ75591.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828887|emb|CBX33729.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130013|gb|EFT86002.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194825|gb|EFU25214.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198047|gb|EFU28379.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139326|gb|EFW31205.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142876|gb|EFW34672.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438825|gb|EGA96563.1| 30S ribosomal protein S6 [Staphylococcus aureus O11]
gi|323442578|gb|EGB00206.1| 30S ribosomal protein S6 [Staphylococcus aureus O46]
gi|329313058|gb|AEB87471.1| 30S ribosomal protein S6 [Staphylococcus aureus subsp. aureus
T0131]
gi|329724195|gb|EGG60708.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21189]
gi|329725860|gb|EGG62339.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21172]
gi|329732326|gb|EGG68676.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus 21193]
Length = 98
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + +Y
Sbjct: 1 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
+ + S A E +R +I ++++R + + D
Sbjct: 61 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDE 96
>gi|332665255|ref|YP_004448043.1| 30S ribosomal protein S6 [Haliscomenobacter hydrossis DSM 1100]
gi|332334069|gb|AEE51170.1| 30S ribosomal protein S6 [Haliscomenobacter hydrossis DSM 1100]
Length = 160
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE F++ ++S++IK T Y L++ G E+ +NE+G+R +A+ I K Y
Sbjct: 1 MRNYEVTFIVDPVLASEEIKATAQTYVDLLKSKGCEIVHINEMGLRQLAFAIGKRHSGAY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + + I++ + R DE ++R LT+ +D +
Sbjct: 61 YCVEFKAVDGSMINDFELAFRRDERIIRFLTVALDKY 97
>gi|332639081|ref|ZP_08417944.1| ribosomal protein S6 [Weissella cibaria KACC 11862]
Length = 99
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ ++ +NG V + R AY I R+ Y +
Sbjct: 3 YELTYIIRPDMDADAKKALVERFDKILADNGATVAESKDWSSRRFAYEIAGYREGTYHIV 62
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
N + AAI+E R +I +++LR + + D
Sbjct: 63 NFTAEDDAAINEFDRLAKISQDILRHMVVKRD 94
>gi|169830185|ref|YP_001700343.1| 30S ribosomal protein S6 [Lysinibacillus sphaericus C3-41]
gi|168994673|gb|ACA42213.1| 30S ribosomal protein S6 [Lysinibacillus sphaericus C3-41]
Length = 89
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 48/89 (53%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R +I + K + ++ ++ NG EV E G R +AY I+ R+ YY + +
Sbjct: 1 MYIVRPNIEDEAKKALVERFNEVLTSNGAEVIESKEWGKRRLAYEIQDFREGYYQIVKVN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ AI+E R I E+++R + + ++
Sbjct: 61 ATSDAINEYTRLANISEDIIRHIAVRQEA 89
>gi|78186004|ref|YP_374047.1| 30S ribosomal protein S6 [Chlorobium luteolum DSM 273]
gi|91207927|sp|Q3B6M7|RS6_PELLD RecName: Full=30S ribosomal protein S6
gi|78165906|gb|ABB23004.1| SSU ribosomal protein S6P [Chlorobium luteolum DSM 273]
Length = 133
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V ++G R AY I+K Y
Sbjct: 5 KLYECTVIIDGGLQDEAIAAAMEMVQKVITEKGGSISSVLDIGRRKTAYPIKKKTIGSYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + I E++R +R +E +LR L + H SP L +++
Sbjct: 65 HIEFTAATPVIAEIERVLRYEEVLLRYLIV----HLTSPLLEMRKR 106
>gi|42518091|ref|NP_964021.1| 30S ribosomal protein S6 [Lactobacillus johnsonii NCC 533]
gi|227889151|ref|ZP_04006956.1| 30S ribosomal protein S6 [Lactobacillus johnsonii ATCC 33200]
gi|268318568|ref|YP_003292224.1| ribosomal protein S6 [Lactobacillus johnsonii FI9785]
gi|61215656|sp|Q74M28|RS6_LACJO RecName: Full=30S ribosomal protein S6
gi|41582375|gb|AAS07987.1| 30S ribosomal protein S7 [Lactobacillus johnsonii NCC 533]
gi|227850380|gb|EEJ60466.1| 30S ribosomal protein S6 [Lactobacillus johnsonii ATCC 33200]
gi|262396943|emb|CAX65957.1| ribosomal protein S6 [Lactobacillus johnsonii FI9785]
gi|329666398|gb|AEB92346.1| 30S ribosomal protein S6 [Lactobacillus johnsonii DPC 6026]
Length = 98
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++ DI K I ++ ++ +NG E + G R AY I K R+ Y
Sbjct: 5 KYEVTYIIKPDIDEDSKKALIDRFDKVVTDNGAEELESKDWGKRRFAYEIEKYREGTYHI 64
Query: 63 MNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
M + + E R RID +LRS+T+ +D
Sbjct: 65 MTFVAENSEPVDEFGRLSRIDNQILRSMTVKLDK 98
>gi|306820944|ref|ZP_07454564.1| 30S ribosomal protein S6 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551058|gb|EFM39029.1| 30S ribosomal protein S6 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 96
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR D + + + + +I+EN GEV + + G R +AY+I+K YY
Sbjct: 1 MKKYELIYILRTDSDDETKQRIQDKLRGIIEEN-GEVEVFDVWGNRKLAYQIQKLTDGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + + P E+ R ++I + +R + + V
Sbjct: 60 VLVKFTAGPQVPKELDRNLKIMDEAIRHMIINV 92
>gi|116332688|ref|YP_794215.1| 30S ribosomal protein S6 [Lactobacillus brevis ATCC 367]
gi|122270616|sp|Q03UD8|RS6_LACBA RecName: Full=30S ribosomal protein S6
gi|116098035|gb|ABJ63184.1| SSU ribosomal protein S6P [Lactobacillus brevis ATCC 367]
Length = 98
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++R D+ + ++ ++ +NG E+ + R AY I + Y
Sbjct: 5 KYEITYIIRPDLDDAAKTALVERFDKILTDNGAELINSKDWSKRRFAYEIGGFNEGIYHV 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ + + ++E R +I++++LR + + +
Sbjct: 65 ITLNATDDKGLNEFDRLAKINDSILRHMIVKRE 97
>gi|15605659|ref|NP_213034.1| ribosomal protein S06 [Aquifex aeolicus VF5]
gi|7388213|sp|O66474|RS6_AQUAE RecName: Full=30S ribosomal protein S6
gi|2982820|gb|AAC06443.1| ribosomal protein S06 [Aquifex aeolicus VF5]
Length = 110
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF ++ +S +++K Q + I++ GGE+ + GMR +AY I+K A Y
Sbjct: 8 RYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF 67
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ + P +E+ +++IDE+V+R L + E
Sbjct: 68 LVQFKTENPQLPNELDFQLKIDEDVIRWLNFQIKESE 104
>gi|227432790|ref|ZP_03914753.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351459|gb|EEJ41722.1| ribosomal protein S6 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 98
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+ + K + ++ +++ +NG ++ + R AY I R+ Y +
Sbjct: 5 YEMTYIVRPDLDADAKKTLVERFDAILTDNGATIQKSADWATRRFAYEIAGYREGTYHII 64
Query: 64 NIASPPA-AIHEMKRKMRIDENVLRSLTLLVDSH 96
+ AI+E R +I +++LR + + D+
Sbjct: 65 KFTAEDDKAINEFDRLAKISQDILRHMIVKRDAE 98
>gi|46190915|ref|ZP_00120886.2| COG0360: Ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|189440081|ref|YP_001955162.1| 30S ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|213691155|ref|YP_002321741.1| ribosomal protein S6 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227545706|ref|ZP_03975755.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622620|ref|ZP_04665651.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291455935|ref|ZP_06595325.1| ribosomal protein S6 [Bifidobacterium breve DSM 20213]
gi|296453409|ref|YP_003660552.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133419|ref|YP_004000758.1| rpsf [Bifidobacterium longum subsp. longum BBMN68]
gi|322688389|ref|YP_004208123.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
157F]
gi|322690409|ref|YP_004219979.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|189428516|gb|ACD98664.1| Ribosomal protein S6 [Bifidobacterium longum DJO10A]
gi|213522616|gb|ACJ51363.1| ribosomal protein S6 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|227213822|gb|EEI81661.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514617|gb|EEQ54484.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291382344|gb|EFE89862.1| ribosomal protein S6 [Bifidobacterium breve DSM 20213]
gi|291517550|emb|CBK71166.1| SSU ribosomal protein S6P [Bifidobacterium longum subsp. longum
F8]
gi|296182840|gb|ADG99721.1| ribosomal protein S6 [Bifidobacterium longum subsp. longum
JDM301]
gi|311772648|gb|ADQ02136.1| RpsF [Bifidobacterium longum subsp. longum BBMN68]
gi|320455265|dbj|BAJ65887.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320457213|dbj|BAJ67834.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320459725|dbj|BAJ70345.1| 30S ribosomal protein S6 [Bifidobacterium longum subsp. infantis
157F]
Length = 96
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG + G R +AY I + YV
Sbjct: 5 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSFDEPDYWGRRKLAYEIAGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + PA E+ R + ++E+V+R+ L
Sbjct: 65 VKYTAEPATSDELDRVLNLNESVIRTKILR 94
>gi|332295123|ref|YP_004437046.1| 30S ribosomal protein S6 [Thermodesulfobium narugense DSM 14796]
gi|332178226|gb|AEE13915.1| 30S ribosomal protein S6 [Thermodesulfobium narugense DSM 14796]
Length = 126
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE V L + ++I + + LI ++ GE+ + G + +AY I R+A Y+
Sbjct: 5 KLYELVILFNPNAEEEKIDALMKRIHDLISKSSGELLKSDNWGKKRLAYTIDDLREAIYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ P + + E+ R ++I E V+R + + Q L+ ++ D + +
Sbjct: 65 YDEFRLPTSVVAEVDRILKISEIVIRHMIVKKPDVLQKAALSAEKEDNQSKEGETDSNEQ 124
Query: 122 VD 123
V
Sbjct: 125 VQ 126
>gi|317486568|ref|ZP_07945389.1| ribosomal protein S6 [Bilophila wadsworthia 3_1_6]
gi|316922168|gb|EFV43433.1| ribosomal protein S6 [Bilophila wadsworthia 3_1_6]
Length = 100
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++++ + +G + +I+ GG + GMR +AY +RK + Y+
Sbjct: 1 MRKFETLLLLSPELAADAREALLGTFTGVIERAGGRFTA-DHWGMRDLAYPVRKQMRGYF 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
V + +P + E++R +RI + + LT+ + D+ E+
Sbjct: 60 VRLEYVAPGDTVAELERIIRISDGAFKFLTVKLADAAEE 98
>gi|227529856|ref|ZP_03959905.1| ribosomal protein S6 [Lactobacillus vaginalis ATCC 49540]
gi|227350225|gb|EEJ40516.1| ribosomal protein S6 [Lactobacillus vaginalis ATCC 49540]
Length = 98
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R D+ D + ++ ++++NG + + R AY I K + Y
Sbjct: 4 RKYEITYIIRPDMEESAKSDLVARFDKILEDNGATIADSKDWSTRRFAYPIDKYTEGTYH 63
Query: 62 FMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
+N+ + A++E R + ++++LR + + ++
Sbjct: 64 VVNLTTDTDEALNEFDRLAKFNDDILRHMIIKREA 98
>gi|261338589|ref|ZP_05966473.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
gi|270276623|gb|EFA22477.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
Length = 95
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ + +K QY ++ + GG V ++ G R +AY I + YV
Sbjct: 5 NYELMFIADPQLDENGLKKLTNQYMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + PA E+ R + ++E+V+R+ L
Sbjct: 65 VLYTAEPAVSDELDRLLNLNESVVRTKILR 94
>gi|328464625|gb|EGF35983.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus MTCC 5462]
Length = 95
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y
Sbjct: 5 KYEVTYIIRPDLDEAAKTELVERFDNILKENGASIIDSKDWQKRKLAYEINKYNEGLYHI 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTLL 92
+N+++ AI+E R +I+ ++LR + +
Sbjct: 65 VNLSAEDDKAINEFDRLAKINNDILRHMIVK 95
>gi|227876515|ref|ZP_03994627.1| ribosomal protein S6 [Mobiluncus mulieris ATCC 35243]
gi|269977717|ref|ZP_06184677.1| ribosomal protein S6 [Mobiluncus mulieris 28-1]
gi|306817476|ref|ZP_07451220.1| 30S ribosomal protein S6 [Mobiluncus mulieris ATCC 35239]
gi|307699801|ref|ZP_07636852.1| ribosomal protein S6 [Mobiluncus mulieris FB024-16]
gi|227843056|gb|EEJ53253.1| ribosomal protein S6 [Mobiluncus mulieris ATCC 35243]
gi|269934021|gb|EEZ90595.1| ribosomal protein S6 [Mobiluncus mulieris 28-1]
gi|304649700|gb|EFM46981.1| 30S ribosomal protein S6 [Mobiluncus mulieris ATCC 35239]
gi|307614839|gb|EFN94057.1| ribosomal protein S6 [Mobiluncus mulieris FB024-16]
Length = 95
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 52/95 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ + + GG+V ++ G R +AY I K Y
Sbjct: 1 MRKYEMMVIVDPEVDERTVEPSMSALFGQVNDLGGKVEKLDVWGKRRLAYPILKKTDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E++LR+ L D+
Sbjct: 61 VVVDMETTPEVAKELDRQLSLNESILRTKLLRRDA 95
>gi|23465014|ref|NP_695617.1| 30S ribosomal protein S6 [Bifidobacterium longum NCC2705]
gi|317482745|ref|ZP_07941757.1| ribosomal protein S6 [Bifidobacterium sp. 12_1_47BFAA]
gi|32171566|sp|Q8G756|RS6_BIFLO RecName: Full=30S ribosomal protein S6
gi|23325616|gb|AAN24253.1| 30S ribosomal protein S6 [Bifidobacterium longum NCC2705]
gi|316915780|gb|EFV37190.1| ribosomal protein S6 [Bifidobacterium sp. 12_1_47BFAA]
Length = 97
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ + +K QY L+ + GG + G R +AY I + YV
Sbjct: 6 KYELMFIADPELDERGLKKLTEQYLELVTKEGGSFDEPDYWGRRKLAYEIAGKTEGNYVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + PA E+ R + ++E+V+R+ L
Sbjct: 66 VKYTAEPATSDELDRVLNLNESVIRTKILR 95
>gi|299143650|ref|ZP_07036730.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518135|gb|EFI41874.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 97
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + + D+ ++ + + + +I+EN G + V+E GMR +AY I ++AYY
Sbjct: 4 MNKYEAIVMFYPDVEEERRVSSFERLKGIIEEN-GTISNVDEWGMRKLAYEIEYYKEAYY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P + E R +I ++V+R + + +D
Sbjct: 63 YLVEFEAVPETVKEFDRVSKILDSVMRHMVVRLDK 97
>gi|21553777|gb|AAM62870.1| unknown [Arabidopsis thaliana]
Length = 314
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + + + ++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEKHAEE-VESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN ++E K + DE V+R L + D
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITE 217
>gi|117925751|ref|YP_866368.1| 30S ribosomal protein S6P [Magnetococcus sp. MC-1]
gi|167011247|sp|A0LAG9|RS6_MAGSM RecName: Full=30S ribosomal protein S6
gi|117609507|gb|ABK44962.1| SSU ribosomal protein S6P [Magnetococcus sp. MC-1]
Length = 144
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +++LR D++++Q++ ++ + GG+V G R +AY ++KN K +Y
Sbjct: 1 MAFYESIYILRADLTTEQVELVNKRFSDNVAATGGKVVRTELWGRRQLAYLVKKNVKGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
VF + + +H+++ K+ IDE+VL+ + ++ +
Sbjct: 61 VFHILEGEGSMVHDLEAKLGIDEDVLKFQHVRIEDVSDKASP 102
>gi|319891323|ref|YP_004148198.1| SSU ribosomal protein S6p [Staphylococcus pseudintermedius
HKU10-03]
gi|317161019|gb|ADV04562.1| SSU ribosomal protein S6p [Staphylococcus pseudintermedius
HKU10-03]
gi|323465520|gb|ADX77673.1| ribosomal protein S6 [Staphylococcus pseudintermedius ED99]
Length = 98
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I + YY
Sbjct: 1 MRTYEVMYIVRPNIEEDARKAVVERFNGILASEGSEVLETKDWGKRRLAYEIEDFKDGYY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ I S A E +R +I+++++R + + D ++
Sbjct: 61 NIVRIQSENNKATDEFQRLAKINDDIIRYIVVREDENK 98
>gi|257866282|ref|ZP_05645935.1| ribosomal protein S6 [Enterococcus casseliflavus EC30]
gi|257873202|ref|ZP_05652855.1| ribosomal protein S6 [Enterococcus casseliflavus EC10]
gi|257875899|ref|ZP_05655552.1| ribosomal protein S6 [Enterococcus casseliflavus EC20]
gi|325567635|ref|ZP_08144302.1| 30S ribosomal protein S6 [Enterococcus casseliflavus ATCC 12755]
gi|257800240|gb|EEV29268.1| ribosomal protein S6 [Enterococcus casseliflavus EC30]
gi|257807366|gb|EEV36188.1| ribosomal protein S6 [Enterococcus casseliflavus EC10]
gi|257810065|gb|EEV38885.1| ribosomal protein S6 [Enterococcus casseliflavus EC20]
gi|325159068|gb|EGC71214.1| 30S ribosomal protein S6 [Enterococcus casseliflavus ATCC 12755]
Length = 99
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + I ++ S++ +NG EV + R +AY + R+ Y
Sbjct: 5 KYEILYIIRPNIDEEAKAALIARFDSILTDNGAEVIESKDWQKRRLAYEMDGFREGIYHI 64
Query: 63 MNIAS--PPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++S +AI+E R +I+++++R + + ++
Sbjct: 65 VKVSSSTTASAINEFDRLAKINDDIIRHMIVKEEA 99
>gi|257871395|ref|ZP_05651048.1| ribosomal protein S6 [Enterococcus gallinarum EG2]
gi|257805559|gb|EEV34381.1| ribosomal protein S6 [Enterococcus gallinarum EG2]
Length = 99
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + I ++ +++ +NG EV + R +AY + R+ Y
Sbjct: 5 KYEILYIIRPNIDEEAKSALIARFDTILTDNGAEVIESKDWQKRRLAYEMDGFREGIYHI 64
Query: 63 MNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++SP +AI+E R +I+++++R + + +
Sbjct: 65 VKVSSPSNASAINEFDRLAKINDDIIRHMIVKEEE 99
>gi|256370869|ref|YP_003108693.1| ribosomal protein S6 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007453|gb|ACU53020.1| ribosomal protein S6 [Acidimicrobium ferrooxidans DSM 10331]
Length = 112
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + + +S++ + GG + G R +AY I Y
Sbjct: 1 MREYELALITSPALDEEARTALFDRIRSIVNQGGGAITQEAHWGRRMLAYPIAHRTDGAY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
F+ + + PA I E+ R + I + VLR T+ +
Sbjct: 61 SFLRLHAEPATIDELDRVLSIADGVLRHKTIRL 93
>gi|297834614|ref|XP_002885189.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
lyrata]
gi|297331029|gb|EFH61448.1| hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + + + ++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEKHAEE-VESINQKVQDFLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN ++E K + DE V+R L + D
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITE 217
>gi|326202833|ref|ZP_08192700.1| ribosomal protein S6 [Clostridium papyrosolvens DSM 2782]
gi|325986910|gb|EGD47739.1| ribosomal protein S6 [Clostridium papyrosolvens DSM 2782]
Length = 94
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F++ ++ + K + ++++L++ + ++ ++E G R +AY I YYV
Sbjct: 3 KKYETIFIINSEVGEEATKALVEKFKTLLETS-AQLENIDEWGKRKLAYEIDDKIDGYYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N +S P E++R +I E +L+ + + D
Sbjct: 62 LANFSSSPDFPAELERIYKITEGILKYIIIKKD 94
>gi|242085884|ref|XP_002443367.1| hypothetical protein SORBIDRAFT_08g018320 [Sorghum bicolor]
gi|241944060|gb|EES17205.1| hypothetical protein SORBIDRAFT_08g018320 [Sorghum bicolor]
Length = 308
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + +++ + + Q I+E G + VN G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHEDRVEE-VENVVSKVQDFIREKKGRIWRVNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE V+R L + D
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERVIRHLVMKRDEAITE 220
>gi|18401405|ref|NP_566568.1| RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural
constituent of ribosome [Arabidopsis thaliana]
gi|15620810|dbj|BAB67768.1| RPS6-like protein [Arabidopsis thaliana]
gi|18377866|gb|AAL67119.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]
gi|20856347|gb|AAM26661.1| AT3g17170/K14A17_29 [Arabidopsis thaliana]
gi|332642393|gb|AEE75914.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Arabidopsis thaliana]
Length = 314
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ + + + ++ + Q ++E G+V ++ GMR +AY+I+K A+Y
Sbjct: 120 MRHYEVVYLIHEKHAEE-VESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHY 178
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN ++E K + DE V+R L + D
Sbjct: 179 ILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITE 217
>gi|218135344|ref|ZP_03464148.1| hypothetical protein BACPEC_03249 [Bacteroides pectinophilus ATCC
43243]
gi|217990729|gb|EEC56740.1| hypothetical protein BACPEC_03249 [Bacteroides pectinophilus ATCC
43243]
Length = 95
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ ++ + +T+ Q + L+ GG + V + G + +AY I+ + +Y
Sbjct: 1 MNKYELTVVVSANVEDEVRVNTVEQVKELVARFGGVISNVEDCGKKRLAYEIQHMKDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + AA E++ ++RI +NV+R L + ++
Sbjct: 61 YFIKFDADAAAPAEIESRIRIMDNVIRFLIVKEEA 95
>gi|242372654|ref|ZP_04818228.1| 30S ribosomal protein S6 [Staphylococcus epidermidis M23864:W1]
gi|242349571|gb|EES41172.1| 30S ribosomal protein S6 [Staphylococcus epidermidis M23864:W1]
Length = 98
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKALVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + A E +R +I+++++R + + D
Sbjct: 61 NIVRIKTDNNKATDEFQRLAKINDDIIRYIVIRED 95
>gi|227874247|ref|ZP_03992446.1| possible ribosomal protein S6 [Oribacterium sinus F0268]
gi|227839916|gb|EEJ50347.1| possible ribosomal protein S6 [Oribacterium sinus F0268]
Length = 113
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRL-VNELGMRTIAYRIRKNRKAY 59
M YE +L + ++ I + + I G V + E G + +AY I+ ++AY
Sbjct: 1 MNKYELCVVLSAKLDDEERAAAIEKIKGFITRYNGTVVEPIEEWGKKRLAYEIQHMKEAY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y F+ +E++ ++RI E V+R L + +
Sbjct: 61 YYFIPFTGDANTPNELEDQVRIMEPVIRYLVVKPEEETAK 100
>gi|239637257|ref|ZP_04678245.1| ribosomal protein S6 [Staphylococcus warneri L37603]
gi|239597213|gb|EEQ79722.1| ribosomal protein S6 [Staphylococcus warneri L37603]
gi|330685077|gb|EGG96744.1| ribosomal protein S6 [Staphylococcus epidermidis VCU121]
Length = 98
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I S A E +R +I+++++R + + D
Sbjct: 61 NIVRIKSDNNKATDEFQRLAKINDDIIRYIVIRED 95
>gi|163783214|ref|ZP_02178208.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881548|gb|EDP75058.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
Length = 113
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF+L+ + +++K + + I+ GGE+ + G +T+AYRI Y
Sbjct: 11 RFYETVFVLKPTFTEEEVKQKAEEIKKFIESKGGEILHFQDWGTKTLAYRIENFNHGRYF 70
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
+ + P +E+ + +I+E+++R L + E
Sbjct: 71 LVQYKTENPELPNELDFQFKINEDIIRWLNFQIKESE 107
>gi|199598221|ref|ZP_03211642.1| Ribosomal protein S6 [Lactobacillus rhamnosus HN001]
gi|229551092|ref|ZP_04439817.1| ribosomal protein S6 [Lactobacillus rhamnosus LMS2-1]
gi|258507006|ref|YP_003169757.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus GG]
gi|258538203|ref|YP_003172702.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus Lc 705]
gi|199590824|gb|EDY98909.1| Ribosomal protein S6 [Lactobacillus rhamnosus HN001]
gi|229315553|gb|EEN81526.1| ribosomal protein S6 [Lactobacillus rhamnosus LMS2-1]
gi|257146933|emb|CAR85906.1| SSU/30S ribosomal protein S6P [Lactobacillus rhamnosus GG]
gi|257149879|emb|CAR88851.1| SSU/30S ribosomal protein S6P [Lactobacillus rhamnosus Lc 705]
gi|259648375|dbj|BAI40537.1| 30S ribosomal protein S6 [Lactobacillus rhamnosus GG]
Length = 98
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y
Sbjct: 5 KYEVTYIIRPDLDEAAKTELVERFDNILKENGASIIDSKDWQKRKLAYEINKYNEGLYHI 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+N+++ AI+E R +I+ ++LR + + +
Sbjct: 65 VNLSAEDDKAINEFDRLAKINNDILRHMIVKRE 97
>gi|184154483|ref|YP_001842823.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227514125|ref|ZP_03944174.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
gi|226703480|sp|B2GEV4|RS6_LACF3 RecName: Full=30S ribosomal protein S6
gi|183225827|dbj|BAG26343.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227087496|gb|EEI22808.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
Length = 97
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++R DI + + ++ ++ +NG V + R AY+I K + Y
Sbjct: 4 RKYEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWDTRRFAYQIGKYTEGTYH 63
Query: 62 FMNIASPPAA-IHEMKRKMRIDENVLRSLTLLV 93
+N+ + A ++E R + +++LR + +
Sbjct: 64 IVNVTADSDASLNEFDRLAKFSDDILRHMIVKR 96
>gi|297572325|ref|YP_003698099.1| ribosomal protein S6 [Arcanobacterium haemolyticum DSM 20595]
gi|296932672|gb|ADH93480.1| ribosomal protein S6 [Arcanobacterium haemolyticum DSM 20595]
Length = 101
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 54/99 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + +L + + ++ T+ + +++ GG + V+ LG R +AY I K + Y
Sbjct: 1 MRQYEMMIILDPETDERTLQGTLEKLLAVVPAEGGTLDNVDILGKRRLAYSINKKSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V + + + PA E+ R++ ++E+++R+ L + +
Sbjct: 61 VVVYMTATPATAQELDRQLGLNESIMRTKLLRYEPVTTT 99
>gi|295698470|ref|YP_003603125.1| 30S ribosomal protein S6 [Candidatus Riesia pediculicola USDA]
gi|291157301|gb|ADD79746.1| 30S ribosomal protein S6 [Candidatus Riesia pediculicola USDA]
Length = 136
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V ++ D S++ I + ++ ++E G + + + G + ++Y I K KA+Y
Sbjct: 14 MNHYEIVLMIHPDKSNR-IDKILTSLKNNVKEMSGTIHRLEDWGRKQLSYPIFKLHKAHY 72
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI--QRHDRDDRNDRFPR 118
+ +N+ I E+K + R +E+++R++ L V+ P+L I + + D + + +
Sbjct: 73 ILINLEISKEFIQEIKDEFRSEESIIRNIILKVNKPISKPSLMINCKEVENDPKENVHEK 132
>gi|260579520|ref|ZP_05847393.1| 30S ribosomal protein S6 [Corynebacterium jeikeium ATCC 43734]
gi|258602369|gb|EEW15673.1| 30S ribosomal protein S6 [Corynebacterium jeikeium ATCC 43734]
Length = 98
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + ++ + + ++ +Y ++++ G V V+ G R + Y I K + YV
Sbjct: 5 RQYEMMIIIDPSQDERTVAPSLDKYLDIVRKENGSVEKVDIWGKRRLEYPINKKDEGIYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ A + E+ R + I++ +LR+ L D
Sbjct: 65 VLDLKCESATVLEIDRLLNINDQILRTKVLRKD 97
>gi|269217869|ref|ZP_06161723.1| ribosomal protein S6 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212804|gb|EEZ79144.1| ribosomal protein S6 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 95
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 50/95 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + I + + + ++ GG + V+ G R +AY I K + Y
Sbjct: 1 MRDYEMMIIIDPTVDERNITNFVDKLLQVVPNEGGTLEKVDIWGKRRLAYDINKRSEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E +LR+ L ++
Sbjct: 61 VVVDMKATPETAQELDRQLGLNEAILRTKLLRAEA 95
>gi|69246712|ref|ZP_00604080.1| Ribosomal protein S6 [Enterococcus faecium DO]
gi|227550646|ref|ZP_03980695.1| ribosomal protein S6 [Enterococcus faecium TX1330]
gi|257878652|ref|ZP_05658305.1| ribosomal protein S6 [Enterococcus faecium 1,230,933]
gi|257881318|ref|ZP_05660971.1| ribosomal protein S6 [Enterococcus faecium 1,231,502]
gi|257885593|ref|ZP_05665246.1| ribosomal protein S6 [Enterococcus faecium 1,231,501]
gi|257888089|ref|ZP_05667742.1| ribosomal protein S6 [Enterococcus faecium 1,141,733]
gi|257890535|ref|ZP_05670188.1| ribosomal protein S6 [Enterococcus faecium 1,231,410]
gi|257893110|ref|ZP_05672763.1| ribosomal protein S6 [Enterococcus faecium 1,231,408]
gi|257896293|ref|ZP_05675946.1| ribosomal protein S6 [Enterococcus faecium Com12]
gi|258615264|ref|ZP_05713034.1| 30S ribosomal protein S6 [Enterococcus faecium DO]
gi|260558233|ref|ZP_05830429.1| ribosomal protein S6 [Enterococcus faecium C68]
gi|261206923|ref|ZP_05921612.1| ribosomal protein S6 [Enterococcus faecium TC 6]
gi|289566500|ref|ZP_06446924.1| 30S ribosomal protein S6 [Enterococcus faecium D344SRF]
gi|293379374|ref|ZP_06625518.1| ribosomal protein S6 [Enterococcus faecium PC4.1]
gi|293563257|ref|ZP_06677709.1| ribosomal protein S6 [Enterococcus faecium E1162]
gi|293569153|ref|ZP_06680459.1| ribosomal protein S6 [Enterococcus faecium E1071]
gi|294616653|ref|ZP_06696424.1| ribosomal protein S6 [Enterococcus faecium E1636]
gi|294619751|ref|ZP_06699156.1| ribosomal protein S6 [Enterococcus faecium E1679]
gi|294623765|ref|ZP_06702593.1| ribosomal protein S6 [Enterococcus faecium U0317]
gi|314940125|ref|ZP_07847305.1| ribosomal protein S6 [Enterococcus faecium TX0133a04]
gi|314943044|ref|ZP_07849848.1| ribosomal protein S6 [Enterococcus faecium TX0133C]
gi|314948162|ref|ZP_07851558.1| ribosomal protein S6 [Enterococcus faecium TX0082]
gi|314953424|ref|ZP_07856342.1| ribosomal protein S6 [Enterococcus faecium TX0133A]
gi|314993837|ref|ZP_07859173.1| ribosomal protein S6 [Enterococcus faecium TX0133B]
gi|314998138|ref|ZP_07863020.1| ribosomal protein S6 [Enterococcus faecium TX0133a01]
gi|68195126|gb|EAN09585.1| Ribosomal protein S6 [Enterococcus faecium DO]
gi|227180212|gb|EEI61184.1| ribosomal protein S6 [Enterococcus faecium TX1330]
gi|257812880|gb|EEV41638.1| ribosomal protein S6 [Enterococcus faecium 1,230,933]
gi|257816976|gb|EEV44304.1| ribosomal protein S6 [Enterococcus faecium 1,231,502]
gi|257821449|gb|EEV48579.1| ribosomal protein S6 [Enterococcus faecium 1,231,501]
gi|257824143|gb|EEV51075.1| ribosomal protein S6 [Enterococcus faecium 1,141,733]
gi|257826895|gb|EEV53521.1| ribosomal protein S6 [Enterococcus faecium 1,231,410]
gi|257829489|gb|EEV56096.1| ribosomal protein S6 [Enterococcus faecium 1,231,408]
gi|257832858|gb|EEV59279.1| ribosomal protein S6 [Enterococcus faecium Com12]
gi|260075407|gb|EEW63713.1| ribosomal protein S6 [Enterococcus faecium C68]
gi|260078551|gb|EEW66253.1| ribosomal protein S6 [Enterococcus faecium TC 6]
gi|289161709|gb|EFD09585.1| 30S ribosomal protein S6 [Enterococcus faecium D344SRF]
gi|291588122|gb|EFF19964.1| ribosomal protein S6 [Enterococcus faecium E1071]
gi|291590473|gb|EFF22211.1| ribosomal protein S6 [Enterococcus faecium E1636]
gi|291594021|gb|EFF25490.1| ribosomal protein S6 [Enterococcus faecium E1679]
gi|291596719|gb|EFF27942.1| ribosomal protein S6 [Enterococcus faecium U0317]
gi|291604796|gb|EFF34278.1| ribosomal protein S6 [Enterococcus faecium E1162]
gi|292641897|gb|EFF60063.1| ribosomal protein S6 [Enterococcus faecium PC4.1]
gi|313587850|gb|EFR66695.1| ribosomal protein S6 [Enterococcus faecium TX0133a01]
gi|313591728|gb|EFR70573.1| ribosomal protein S6 [Enterococcus faecium TX0133B]
gi|313594527|gb|EFR73372.1| ribosomal protein S6 [Enterococcus faecium TX0133A]
gi|313598244|gb|EFR77089.1| ribosomal protein S6 [Enterococcus faecium TX0133C]
gi|313640630|gb|EFS05210.1| ribosomal protein S6 [Enterococcus faecium TX0133a04]
gi|313645416|gb|EFS09996.1| ribosomal protein S6 [Enterococcus faecium TX0082]
Length = 99
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + I ++ +++++NG EV + R AY + R+ Y
Sbjct: 5 KYEIMYIIRPNIDEEAKTALIERFDAILKDNGAEVIESKDWEKRRFAYEMNGYREGIYHI 64
Query: 63 MNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++SP A++E R +I+++++R + + ++
Sbjct: 65 VKVSSPSSANAVNEFDRLAKINDDIIRHMIVKEEA 99
>gi|184158694|ref|YP_001847033.1| 30S ribosomal protein S6 [Acinetobacter baumannii ACICU]
gi|183210288|gb|ACC57686.1| putative 30S ribosomal protein S6 [Acinetobacter baumannii ACICU]
Length = 107
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ +Y S I+E G++ + + G R +AY I K KA+Y+ MN+ + + E++ R
Sbjct: 1 MVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYILMNVECGQSTLDELEELFRY 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVS 129
++ ++R+L + + +L + + + R + R+ Q
Sbjct: 61 NDAIIRNLIIRREHAITEESL-LAKSAEEKRARKAQREEAQQVAQEAE 107
>gi|257899277|ref|ZP_05678930.1| ribosomal protein S6 [Enterococcus faecium Com15]
gi|293557085|ref|ZP_06675643.1| ribosomal protein S6 [Enterococcus faecium E1039]
gi|293572724|ref|ZP_06683688.1| ribosomal protein S6 [Enterococcus faecium E980]
gi|257837189|gb|EEV62263.1| ribosomal protein S6 [Enterococcus faecium Com15]
gi|291600748|gb|EFF31042.1| ribosomal protein S6 [Enterococcus faecium E1039]
gi|291607216|gb|EFF36574.1| ribosomal protein S6 [Enterococcus faecium E980]
Length = 99
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + I ++ +++++NG EV + R AY + R+ Y
Sbjct: 5 KYEIMYIIRPNIDEEAKTALIERFDAILKDNGAEVIESKDWEKRRFAYEMNGYREGIYHI 64
Query: 63 MNIASP--PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ ++SP A+ E R +I+++++R + + ++
Sbjct: 65 VKVSSPSSANAVSEFDRLAKINDDIIRHMIVKEEA 99
>gi|223043351|ref|ZP_03613397.1| ribosomal protein S6 [Staphylococcus capitis SK14]
gi|314935021|ref|ZP_07842380.1| ribosomal protein S6 [Staphylococcus caprae C87]
gi|222443140|gb|EEE49239.1| ribosomal protein S6 [Staphylococcus capitis SK14]
gi|313652951|gb|EFS16714.1| ribosomal protein S6 [Staphylococcus caprae C87]
Length = 98
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + A E +R +I+++++R + + D
Sbjct: 61 NIVRIKTDNNKATDEFQRLAKINDDIIRYIVIRED 95
>gi|298345835|ref|YP_003718522.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 43063]
gi|304390462|ref|ZP_07372415.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315654408|ref|ZP_07907316.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 51333]
gi|315657670|ref|ZP_07910552.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235896|gb|ADI67028.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 43063]
gi|304326218|gb|EFL93463.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315491443|gb|EFU81060.1| 30S ribosomal protein S6 [Mobiluncus curtisii ATCC 51333]
gi|315492142|gb|EFU81751.1| 30S ribosomal protein S6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 95
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ ++ + ++ ++ +++ GG+V ++ G R +AY I K Y
Sbjct: 1 MRKYEMMVIIDPEVDERTVEPSMSALFGQVKDLGGKVEKLDVWGKRKLAYPILKKTDGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V +++ + P E+ R++ ++E++LR+ + D+
Sbjct: 61 VVVDMETTPEIAKELDRQLGLNESILRTKLMRKDA 95
>gi|86609124|ref|YP_477886.1| 30S ribosomal protein S6 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502164|sp|Q2JKZ9|RS6_SYNJB RecName: Full=30S ribosomal protein S6
gi|86557666|gb|ABD02623.1| ribosomal protein S6 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 96
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA-YRIRKNRKAYY 60
+ YE + ++R D+S + ++ + +++++ENG + G R A + ++K ++ Y
Sbjct: 3 RAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEGLY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ N + P A+ ++ +RI+E+VLR +TL V
Sbjct: 63 IQFNYEAEPNAVAAWEKNLRINESVLRHMTLRV 95
>gi|328956389|ref|YP_004373775.1| 30S ribosomal protein S6 [Carnobacterium sp. 17-4]
gi|328672713|gb|AEB28759.1| 30S ribosomal protein S6 [Carnobacterium sp. 17-4]
Length = 99
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE ++++R +I + + ++ +++++NG E+ + R AY I+ + Y
Sbjct: 5 AKYEILYIIRPNIEEAEKAALVERFDTILKDNGAEITESKDWSKRRFAYEIKDFHEGIYH 64
Query: 62 FMNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + + AAI+E R +I ++LR +T+ +
Sbjct: 65 IVKLTANDAAAINEFDRLSKISSDILRHMTIREE 98
>gi|297242914|ref|ZP_06926852.1| ribosomal protein S6 [Gardnerella vaginalis AMD]
gi|298253288|ref|ZP_06977080.1| ribosomal protein S6 [Gardnerella vaginalis 5-1]
gi|296889125|gb|EFH27859.1| ribosomal protein S6 [Gardnerella vaginalis AMD]
gi|297532683|gb|EFH71569.1| ribosomal protein S6 [Gardnerella vaginalis 5-1]
Length = 90
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+F+ ++ +K QY L+ GG V + G R AY I + YV +N
Sbjct: 1 MFIANPELDEHGLKKLTEQYLELVTNEGGSVDGTDYWGRRKFAYEIEGKTEGNYVVVNYT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P+ E+ R + ++E+V+R+ L D+
Sbjct: 61 AEPSVSDELDRVLNLNESVIRTKILRKDA 89
>gi|326492696|dbj|BAJ90204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 303
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + ++D + + Q I+E G + VN G+R +AY+I+K A Y
Sbjct: 118 MRHYEVVYLIHEDRVEE-VEDVVSKVQDFIREKKGRIWRVNNWGLRRLAYKIKKATHANY 176
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL------TIQRHDRDDRND 114
+ MN +I++ K + DE ++R L + D ++ DD
Sbjct: 177 ILMNFEIQAQSINDFKTLLDKDERIIRHLVMKRDEAITEDCPPPPEFHAMRSQQLDDEYI 236
Query: 115 RFPRDRNVDRKQHVSEEK 132
+ D E
Sbjct: 237 DEEYGKADDADDEAELES 254
>gi|154482842|ref|ZP_02025290.1| hypothetical protein EUBVEN_00538 [Eubacterium ventriosum ATCC
27560]
gi|149736270|gb|EDM52156.1| hypothetical protein EUBVEN_00538 [Eubacterium ventriosum ATCC
27560]
Length = 96
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ + + + + ++LI++ GG + + E G + +AY I+K +A+Y
Sbjct: 1 MNKYELTVVVSAKLDDEGRTAEVEKVKALIEKFGGTITKIEEAGKKKLAYEIQKMSEAFY 60
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
F++I + E++ ++RI ENV+R +T+ V++
Sbjct: 61 YFIDIDTENTDFPSELESQLRIMENVIRFMTVAVEA 96
>gi|27469290|ref|NP_765927.1| 30S ribosomal protein S6 [Staphylococcus epidermidis ATCC 12228]
gi|57865983|ref|YP_187644.1| 30S ribosomal protein S6 [Staphylococcus epidermidis RP62A]
gi|242243299|ref|ZP_04797744.1| 30S ribosomal protein S6 [Staphylococcus epidermidis W23144]
gi|251811313|ref|ZP_04825786.1| 30S ribosomal protein S6 [Staphylococcus epidermidis BCM-HMP0060]
gi|282874666|ref|ZP_06283548.1| ribosomal protein S6 [Staphylococcus epidermidis SK135]
gi|293367632|ref|ZP_06614284.1| 30S ribosomal protein S6 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|32171535|sp|Q8CQP4|RS6_STAES RecName: Full=30S ribosomal protein S6
gi|73919119|sp|Q5HRZ5|RS6_STAEQ RecName: Full=30S ribosomal protein S6
gi|27316840|gb|AAO06015.1|AE016752_48 30S ribosomal protein S6 [Staphylococcus epidermidis ATCC 12228]
gi|57636641|gb|AAW53429.1| ribosomal protein S6 [Staphylococcus epidermidis RP62A]
gi|242233248|gb|EES35560.1| 30S ribosomal protein S6 [Staphylococcus epidermidis W23144]
gi|251805180|gb|EES57837.1| 30S ribosomal protein S6 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296590|gb|EFA89102.1| ribosomal protein S6 [Staphylococcus epidermidis SK135]
gi|291318202|gb|EFE58596.1| 30S ribosomal protein S6 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399803|gb|EFV88051.1| ribosomal protein S6 [Staphylococcus epidermidis FRI909]
gi|329723864|gb|EGG60391.1| ribosomal protein S6 [Staphylococcus epidermidis VCU144]
gi|329734357|gb|EGG70671.1| ribosomal protein S6 [Staphylococcus epidermidis VCU028]
gi|329736064|gb|EGG72337.1| ribosomal protein S6 [Staphylococcus epidermidis VCU045]
Length = 98
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYIVRPNIEEDAKKALVERFNGILASEGSEVLEEKDWGKRRLAYEINDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + + E +R +I+++++R + + D
Sbjct: 61 NIVRIKTDNNKSTDEFQRLAKINDDIIRYIVIRED 95
>gi|193211784|ref|YP_001997737.1| 30S ribosomal protein S6 [Chlorobaculum parvum NCIB 8327]
gi|226703438|sp|B3QRL5|RS6_CHLP8 RecName: Full=30S ribosomal protein S6
gi|193085261|gb|ACF10537.1| ribosomal protein S6 [Chlorobaculum parvum NCIB 8327]
Length = 131
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++ + I + + I + G + V E+G R +AY I K+ YY
Sbjct: 5 KQYECTVIIDGGLQDDAIAAAMELVKKTITDQGSVINNVLEVGRRKMAYLIGKSSVGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + P+AI E++R R +EN+LR L + + SP L +++
Sbjct: 65 HIEFDAAPSAIAEIERVFRYEENILRFLIIQL----SSPLLEMRKR 106
>gi|240144657|ref|ZP_04743258.1| ribosomal protein S6 [Roseburia intestinalis L1-82]
gi|257203297|gb|EEV01582.1| ribosomal protein S6 [Roseburia intestinalis L1-82]
gi|291537108|emb|CBL10220.1| SSU ribosomal protein S6P [Roseburia intestinalis M50/1]
gi|291540343|emb|CBL13454.1| SSU ribosomal protein S6P [Roseburia intestinalis XB6B4]
Length = 96
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I T+ + + I GG V V E G + +AY I+K +A+Y
Sbjct: 1 MNKYELALVVSAKIEDDARTATVEKAKEYITRAGGNVTEVEEAGKKKLAYEIQKMSEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ + E++R +RI +NVLR L + D
Sbjct: 61 YFIQFDAASTVPAEVERDVRIMDNVLRFLVVRKDE 95
>gi|78356457|ref|YP_387906.1| 30S ribosomal protein S6 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|91207914|sp|Q312D5|RS6_DESDG RecName: Full=30S ribosomal protein S6
gi|78218862|gb|ABB38211.1| SSU ribosomal protein S6P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 101
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ +E + LL ++ SQ +D + +I+ G V V+ GMR +AY +RK+ + YY
Sbjct: 1 MRKFETLLLLSPELGSQPREDLLAVLTGVIEREQGSVLAVDHWGMRDLAYPVRKHMRGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQS 99
V + A ++ E++R +RI + + + +T+ + D E++
Sbjct: 61 VRLEYAVAGPSVAELERIIRITDGIYKFVTVKLADEAEEA 100
>gi|160931688|ref|ZP_02079082.1| hypothetical protein CLOLEP_00519 [Clostridium leptum DSM 753]
gi|156869333|gb|EDO62705.1| hypothetical protein CLOLEP_00519 [Clostridium leptum DSM 753]
Length = 98
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V ++ + + + + +++ LI+ N + V+E G R +AY I K +AYYV
Sbjct: 6 NSYETVLVISLKLGDEGVAAMVQKFKDLIEAN-ATLESVDEWGKRRLAYLINKEAEAYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
N S E+ R +I + +LRSL + ++
Sbjct: 65 LYNFKSDAEFPAELDRIYKITDGILRSLIIKKEA 98
>gi|295398129|ref|ZP_06808178.1| 30S ribosomal protein S6 [Aerococcus viridans ATCC 11563]
gi|294973648|gb|EFG49426.1| 30S ribosomal protein S6 [Aerococcus viridans ATCC 11563]
Length = 100
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R D+ K + Q+ ++ NG + + R +AY I ++ Y
Sbjct: 7 KYEVLYIIRPDMEEASKKALVEQFDQILTSNGVTINESKDWAKRRLAYEINDYKEGIYHL 66
Query: 63 MNIAS-PPAAIHEMKRKMRIDENVLRSLTLLVD 94
+++ + I+E R +I++N+LR + ++
Sbjct: 67 VDMEADDAEGINEFDRLAKINDNILRHMITKIE 99
>gi|194701658|gb|ACF84913.1| unknown [Zea mays]
gi|223975025|gb|ACN31700.1| unknown [Zea mays]
Length = 310
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + +++ + + Q I+E G + +N G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHEDRVEE-VENVVSKVQDFIREKKGRIWRLNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE ++R L + D
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERIIRHLVMKRDEAITE 220
>gi|116493583|ref|YP_805317.1| 30S ribosomal protein S6 [Lactobacillus casei ATCC 334]
gi|191636833|ref|YP_001985999.1| 30S ribosomal protein S6 [Lactobacillus casei BL23]
gi|227533497|ref|ZP_03963546.1| ribosomal protein S6 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239630814|ref|ZP_04673845.1| 30S ribosomal protein S6 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301065137|ref|YP_003787160.1| 30S ribosomal protein L6 [Lactobacillus casei str. Zhang]
gi|122264954|sp|Q03D47|RS6_LACC3 RecName: Full=30S ribosomal protein S6
gi|226703479|sp|B3W6R4|RS6_LACCB RecName: Full=30S ribosomal protein S6
gi|116103733|gb|ABJ68875.1| SSU ribosomal protein S6P [Lactobacillus casei ATCC 334]
gi|190711135|emb|CAQ65141.1| 30S ribosomal protein S6 [Lactobacillus casei BL23]
gi|227188826|gb|EEI68893.1| ribosomal protein S6 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239527097|gb|EEQ66098.1| 30S ribosomal protein S6 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300437544|gb|ADK17310.1| Ribosomal protein S6 [Lactobacillus casei str. Zhang]
gi|327380872|gb|AEA52348.1| 30S ribosomal protein S6 [Lactobacillus casei LC2W]
gi|327384036|gb|AEA55510.1| 30S ribosomal protein S6 [Lactobacillus casei BD-II]
Length = 98
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++R D+ + + ++ ++++ENG + + R +AY I K + Y
Sbjct: 5 KYEVTYIIRPDLDDAAKTELVERFDNILKENGANIIDSKDWQKRKLAYEINKYNEGLYHI 64
Query: 63 MNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+N+++ AI+E R +I+ ++LR + + +
Sbjct: 65 VNLSAEDDKAINEFDRLGKINNDILRHMIVKRE 97
>gi|319442237|ref|ZP_07991393.1| 30S ribosomal protein S6 [Corynebacterium variabile DSM 44702]
Length = 96
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 47/95 (49%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + + ++ ++ +++ G V V+ G R + Y I K + Y
Sbjct: 1 MRQYEMMIIIDPSQDERTVAPSLDKFLETVRKENGTVDNVDIWGKRRLEYPINKQAEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ A + E+ R + ++E ++R+ L D+
Sbjct: 61 AVVDMHCESATVQELDRLLNLNEIIMRTKVLRKDA 95
>gi|302531298|ref|ZP_07283640.1| ribosomal protein S6 [Streptomyces sp. AA4]
gi|302440193|gb|EFL12009.1| ribosomal protein S6 [Streptomyces sp. AA4]
Length = 100
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + T+ + ++I+ +GG V V+ G R +AY I+KN + Y +++
Sbjct: 1 MVILDPTLDERTVAPTLDNFLNVIRTSGGSVEKVDVWGRRRLAYEIKKNAEGIYALLDLN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S A+ E+ R++ + E VLR+ + +
Sbjct: 61 STAEAVKELDRQLSLQETVLRTKVMRRE 88
>gi|294791317|ref|ZP_06756474.1| ribosomal protein S6 [Scardovia inopinata F0304]
gi|294457788|gb|EFG26142.1| ribosomal protein S6 [Scardovia inopinata F0304]
Length = 98
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + + ++ + +K + QY + G V V+ G R +AY I + Y
Sbjct: 5 KYELMLIADPELDDRALKKLVDQYMETVTNEKGTVEKVDIWGRRKLAYEINGKTEGAYAV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +S PA E+ R + ++E+++R+ L D+
Sbjct: 65 VEYSSEPATSAELDRLLNLNESIVRTKILRKDA 97
>gi|125537038|gb|EAY83526.1| hypothetical protein OsI_38738 [Oryza sativa Indica Group]
Length = 317
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + ++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHEDRVEE-VEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE ++R L + D
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAITE 226
>gi|227508136|ref|ZP_03938185.1| 30S ribosomal protein S6 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227511160|ref|ZP_03941209.1| 30S ribosomal protein S6 [Lactobacillus buchneri ATCC 11577]
gi|227523347|ref|ZP_03953396.1| 30S ribosomal protein S6 [Lactobacillus hilgardii ATCC 8290]
gi|227085642|gb|EEI20954.1| 30S ribosomal protein S6 [Lactobacillus buchneri ATCC 11577]
gi|227089453|gb|EEI24765.1| 30S ribosomal protein S6 [Lactobacillus hilgardii ATCC 8290]
gi|227192365|gb|EEI72432.1| 30S ribosomal protein S6 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 98
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++R DI I ++ ++ +NG ++ + R AY I + Y
Sbjct: 4 KKYEITYIIRPDIEEAAKSSLIERFDKIVTDNGAKILDSKDWSKRRFAYEIGGYNEGTYH 63
Query: 62 FMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ + S A++E R +I++++LR + ++ D
Sbjct: 64 IITLTSDNDTALNEFDRLSKINDDILRHMIVVRD 97
>gi|220927514|ref|YP_002504423.1| ribosomal protein S6 [Clostridium cellulolyticum H10]
gi|219997842|gb|ACL74443.1| ribosomal protein S6 [Clostridium cellulolyticum H10]
Length = 94
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +F++ ++ + K + +++++++ + ++ ++E G R +AY I + YYV
Sbjct: 3 KNYETIFIINSEVGEENTKALVEKFKTMLETS-AQLESMDEWGKRKLAYEIDDKTEGYYV 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
N +S P E++R +I E +L+ + + D
Sbjct: 62 LANFSSSPDFPAELERMYKITEGILKYIIIKKD 94
>gi|299820816|ref|ZP_07052705.1| 30S ribosomal protein S6 [Listeria grayi DSM 20601]
gi|299817837|gb|EFI85072.1| 30S ribosomal protein S6 [Listeria grayi DSM 20601]
Length = 97
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++++R +I + K + ++ ++ +G E+ E G R +AY I +Y
Sbjct: 3 KKYEVMYIIRPNIEEDEKKALVERFDGILGHDGAEIIESKEWGKRRLAYEINDFNDGFYH 62
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + +I+E R +I +++R + + ++
Sbjct: 63 IVKLNAENANSINEFDRLAKISGDIIRHIVIKEEA 97
>gi|258591289|emb|CBE67586.1| 30S ribosomal protein S6 (modular protein) [NC10 bacterium 'Dutch
sediment']
Length = 126
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L ++ + I IG + ++ + GG++ + + G + +AY ++K R+ Y
Sbjct: 1 MGHYEVIIILDPALTEESIDTEIGGVREVVTKKGGQMLEIQKWGKKRLAYEVKKRREGQY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V M + P + ++ R RI E +L+ + + +
Sbjct: 61 VLMKVDGPGGVVADLDRHFRITEVILKGAVVRAEEPRRG 99
>gi|163790925|ref|ZP_02185348.1| ribosomal protein S6 [Carnobacterium sp. AT7]
gi|159873767|gb|EDP67848.1| ribosomal protein S6 [Carnobacterium sp. AT7]
Length = 99
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE ++++R +I + + ++ +++++NG E+ + R AY I+ + Y
Sbjct: 5 AKYEILYIIRPNIEEAEKTALVERFDTILKDNGAEITESKDWSKRRFAYEIKDFHEGIYH 64
Query: 62 FMNIASPPA-AIHEMKRKMRIDENVLRSLTLL 92
+ + + A AI+E R +I ++LR +T+
Sbjct: 65 IVKLTANDAVAINEFDRLSKISPDILRHMTIR 96
>gi|86607475|ref|YP_476238.1| 30S ribosomal protein S6 [Synechococcus sp. JA-3-3Ab]
gi|123504663|sp|Q2JQZ7|RS6_SYNJA RecName: Full=30S ribosomal protein S6
gi|86556017|gb|ABD00975.1| ribosomal protein S6 [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA-YRIRKNRKAYY 60
+ YE + ++R D+S + ++ + + +SL++ENG + G R A + ++K ++ Y
Sbjct: 3 RAYETMLIVRPDLSDEPLQQLLTEQESLLRENGATGLEITNRGKRRFAGFEMKKFKEGLY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ N + P + ++ +RI+E++LR +TL V
Sbjct: 63 IQFNYEAEPRTVATWEKNLRINESILRYMTLRV 95
>gi|331700404|ref|YP_004397363.1| 30S ribosomal protein S6 [Lactobacillus buchneri NRRL B-30929]
gi|329127747|gb|AEB72300.1| 30S ribosomal protein S6 [Lactobacillus buchneri NRRL B-30929]
Length = 98
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++R DI I ++ ++ +NG +V + R AY I + Y
Sbjct: 4 KKYEITYIIRPDIEESAKSALIERFDKILTDNGAKVLSSKDWSKRRFAYEIGGFNEGTYH 63
Query: 62 FMNIASPPAA-IHEMKRKMRIDENVLRSLTLLVD 94
+ + + A ++E R +I+ ++LR + ++ D
Sbjct: 64 VVTLTTDSDASLNEFDRLSKINGDILRHMIVVRD 97
>gi|42521680|ref|NP_967060.1| 30S ribosomal protein S6 [Bdellovibrio bacteriovorus HD100]
gi|61215582|sp|Q6MRP3|RS6_BDEBA RecName: Full=30S ribosomal protein S6
gi|39574210|emb|CAE77714.1| 30S ribosomal protein S6 [Bdellovibrio bacteriovorus HD100]
Length = 152
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE V L+ D S ++ KD + ++ I+ G + + G RT+A I K +KA Y
Sbjct: 8 KPYEVVVLMHPDASLEEQKDLFKKNKATIESYKGSINSLETWGKRTLATPIGKLKKAIYF 67
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ AI E++R MRI++ VLR + +D
Sbjct: 68 HSTFEADTQAIAELERTMRINDKVLRFMHTRLDE 101
>gi|241895862|ref|ZP_04783158.1| ribosomal protein S6 [Weissella paramesenteroides ATCC 33313]
gi|241870905|gb|EER74656.1| ribosomal protein S6 [Weissella paramesenteroides ATCC 33313]
Length = 99
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++R D+++ K + ++ ++ +NG V + R Y I R+ Y +
Sbjct: 3 YELTYIIRPDMNADAKKALVERFDKVLSDNGATVVESKDWSSRRFTYEIAGYREGLYHIV 62
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLVD 94
N + AAI+E R +I E++LR + + +
Sbjct: 63 NFTAEDDAAINEFDRLAKISEDILRHMVVKRE 94
>gi|188587505|ref|YP_001919050.1| ribosomal protein S6 [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226695105|sp|B2A456|RS6_NATTJ RecName: Full=30S ribosomal protein S6
gi|179352192|gb|ACB86462.1| ribosomal protein S6 [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 96
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 51/96 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V++L D+ +Q+++ +++S+I+ GG ++ G R +AY I ++ Y
Sbjct: 1 MRAYEVVYVLTPDLEEEQVEEKHNEFKSVIERYGGAPGEIDVWGKRRLAYEIDDYQEGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ E++R +++DE++LR L +
Sbjct: 61 ALRKFQGENQVLTELERSLKMDESILRYLIARDEDA 96
>gi|183602721|ref|ZP_02964084.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683178|ref|YP_002469561.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191513|ref|YP_002968907.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196918|ref|YP_002970473.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183217959|gb|EDT88607.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620828|gb|ACL28985.1| ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249905|gb|ACS46845.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251472|gb|ACS48411.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|295794505|gb|ADG34040.1| 30S ribosomal protein S6 [Bifidobacterium animalis subsp. lactis
V9]
Length = 95
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ +K Q+ ++ + GG V ++ G R +AY I + YV
Sbjct: 5 NYELMFIADPELDENGLKKLTNQHMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVV 64
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + PA E+ R + ++E+++R+ L
Sbjct: 65 VTYSCEPATNDELDRVLNLNESIVRTKILR 94
>gi|148284319|ref|YP_001248409.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Boryong]
gi|166227358|sp|A5CCY7|RS6_ORITB RecName: Full=30S ribosomal protein S6
gi|146739758|emb|CAM79616.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Boryong]
Length = 118
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE V ++R ++SS +I + S+I G++ GMR++AY+I +N++A+Y
Sbjct: 1 MRLYELVLIVRPELSSTEIDKLTDELTSIISNYEGKLVKHEYWGMRSLAYKINRNQRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDR 109
+ + I++ + ++K K++ + ++RS + V SP L Q ++
Sbjct: 61 IMLAISANNNILQKLKNKIKNNLEIIRSRFIKVKEISQTTSPILKNQSFEQ 111
>gi|226529314|ref|NP_001150742.1| ribosomal protein S6 containing protein [Zea mays]
gi|195641412|gb|ACG40174.1| ribosomal protein S6 containing protein [Zea mays]
Length = 310
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + +++ + + Q I+E G + +N G+R +AY+I+K A Y
Sbjct: 123 MRHYEVVYLIHEDRVEE-VENVVSKVQDFIREKKGRIWRLNNWGLRRLAYKIKKATHANY 181
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE ++R L + D
Sbjct: 182 ILMNFEIESRYINDFKTLLDKDERIIRHLVMKRDETITE 220
>gi|108862831|gb|ABA98957.2| ribosomal protein S6 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 317
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V+L+ +D + ++D + + Q ++E G + +N G+R +AY+I+K R A Y
Sbjct: 129 MRHYEVVYLIHEDRVEE-VEDVVSKVQDFVREKKGRIWRLNNWGLRRLAYKIKKARHANY 187
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ MN I++ K + DE ++R L + D
Sbjct: 188 ILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAITE 226
>gi|300087859|ref|YP_003758381.1| 30S ribosomal protein S6 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527592|gb|ADJ26060.1| ribosomal protein S6 [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 106
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V + RQ++S +++ + I +GG V V++ G R +AY I++ + Y+
Sbjct: 13 NNYELVVIYRQEMSQEKLDSAVKFITDAITSSGGAVEAVDKWGKRKLAYPIKQQLEGVYI 72
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + I ++ ++RI ENVLR + +
Sbjct: 73 LFKFQAGSSLIRKISDELRISENVLRHMAIR 103
>gi|119358280|ref|YP_912924.1| 30S ribosomal protein S6 [Chlorobium phaeobacteroides DSM 266]
gi|166226819|sp|A1BJC3|RS6_CHLPD RecName: Full=30S ribosomal protein S6
gi|119355629|gb|ABL66500.1| SSU ribosomal protein S6P [Chlorobium phaeobacteroides DSM 266]
Length = 133
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I + GG + V E+G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEVIAAAMEMVQKVIADKGGSISSVLEVGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + + I E+++ +R +E ++R L + H S L +++ + N
Sbjct: 65 HIEFTAGTSVIAEIEKVLRYEEALMRYLII----HLTSALLEMRKRVEKYSVVIGSPEDN 120
Query: 122 VDRKQHVSE 130
+ SE
Sbjct: 121 AGNEVEASE 129
>gi|289177638|gb|ADC84884.1| SSU ribosomal protein S6P [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 96
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+ ++ +K Q+ ++ + GG V ++ G R +AY I + YV
Sbjct: 6 NYELMFIADPELDENGLKKLTNQHMEIVTKEGGSVENIDIWGRRKLAYEIDGKTEGNYVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + PA E+ R + ++E+++R+ L
Sbjct: 66 VTYSCEPATNDELDRVLNLNESIVRTKILR 95
>gi|289641253|ref|ZP_06473420.1| ribosomal protein S6 [Frankia symbiont of Datisca glomerata]
gi|289509015|gb|EFD29947.1| ribosomal protein S6 [Frankia symbiont of Datisca glomerata]
Length = 98
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 53/92 (57%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L D+ + + ++ QY ++++ GG V V+ G R +AY IRK+ + Y +++
Sbjct: 1 MVILEPDLEERTVAPSLDQYLTVVRSGGGVVEKVDVWGRRRLAYEIRKSFEGIYAIIDLH 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P + E+ R++ ++E+V+R+ + + +
Sbjct: 61 AEPDVVAELDRQLVLNESVIRTKVIRLPEKKP 92
>gi|228474158|ref|ZP_04058895.1| ribosomal protein S6 [Staphylococcus hominis SK119]
gi|314935173|ref|ZP_07842526.1| ribosomal protein S6 [Staphylococcus hominis subsp. hominis C80]
gi|228271853|gb|EEK13190.1| ribosomal protein S6 [Staphylococcus hominis SK119]
gi|313656508|gb|EFS20247.1| ribosomal protein S6 [Staphylococcus hominis subsp. hominis C80]
Length = 98
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + A E +R +I+++++R + + D
Sbjct: 61 FIVRIKTDNNRATDEFQRLAKINDDIIRYIVIRED 95
>gi|162455219|ref|YP_001617586.1| hypothetical protein sce6937 [Sorangium cellulosum 'So ce 56']
gi|161165801|emb|CAN97106.1| rpsF [Sorangium cellulosum 'So ce 56']
Length = 179
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +++LR DI + + + ++ G + V G R +AY I K+R+ YV
Sbjct: 12 REYETIYILRPDIDADGAERIGSRLAEVVGRESGRLTKVETWGRRRLAYDIAKHRRGVYV 71
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD-----------RD 110
++ + E++R +R+ + VL+ T+LV + + +TI D D
Sbjct: 72 YLKYLGGGKVVSEVERNLRLSDGVLKYQTVLVRNDVEVEGVTIADEDVKFERLELAPLED 131
Query: 111 DRNDRFPR-------DRNVDRKQHVSEEKPLS 135
DR+D R +R +DR SE+ P
Sbjct: 132 DRDDSRERQLGLIEPERRIDR---SSEQAPAG 160
>gi|189345696|ref|YP_001942225.1| 30S ribosomal protein S6 [Chlorobium limicola DSM 245]
gi|226703437|sp|B3EEB2|RS6_CHLL2 RecName: Full=30S ribosomal protein S6
gi|189339843|gb|ACD89246.1| ribosomal protein S6 [Chlorobium limicola DSM 245]
Length = 133
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I K YY
Sbjct: 5 KLYECTVIIDGGLQDEAIAAAMEMVQKVITEKGGSISSVLEVGRRKTAYPINKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + I +++ +R +E++LR L + H S L +++
Sbjct: 65 HIEFTAAAPVIGAIEKVLRYEEDLLRYLII----HLTSALLEMRKR 106
>gi|189183703|ref|YP_001937488.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Ikeda]
gi|226695109|sp|B3CRZ7|RS6_ORITI RecName: Full=30S ribosomal protein S6
gi|189180474|dbj|BAG40254.1| 30S ribosomal protein S6 [Orientia tsutsugamushi str. Ikeda]
Length = 118
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE V ++R ++SS +I + S+I G++ GMR++AY+I +N++A+Y
Sbjct: 1 MRLYELVLIVRPELSSTEIDKLTDELTSIISNYEGKLVKHEYWGMRSLAYKINRNQRAHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--HEQSPTLTIQRHDR 109
+ + I++ + ++K K++ + ++RS + V SP L Q ++
Sbjct: 61 IMLAISANNNILQKLKNKIKNNLEIIRSRFIKVKEISQTTSPILKNQSLEQ 111
>gi|270289886|ref|ZP_06196112.1| 30S ribosomal protein S6 [Pediococcus acidilactici 7_4]
gi|304385861|ref|ZP_07368205.1| 30S ribosomal protein S6 [Pediococcus acidilactici DSM 20284]
gi|270281423|gb|EFA27255.1| 30S ribosomal protein S6 [Pediococcus acidilactici 7_4]
gi|304328365|gb|EFL95587.1| 30S ribosomal protein S6 [Pediococcus acidilactici DSM 20284]
Length = 95
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++ ++ + ++ ++ +NG E+ + R AY I + Y
Sbjct: 3 KNYEITYIIAPNLDDAAKTALVERFDKILTDNGAEIVDSKDWSKRRFAYEIGGFNEGIYH 62
Query: 62 FMNIAS-PPAAIHEMKRKMRIDENVLRSLTL 91
+NI + A++E R +I + +LR + +
Sbjct: 63 VVNIKASDDKALNEFDRLSKIADGILRHMIV 93
>gi|223934220|ref|ZP_03626155.1| ribosomal protein S6 [Streptococcus suis 89/1591]
gi|223897117|gb|EEF63543.1| ribosomal protein S6 [Streptococcus suis 89/1591]
Length = 99
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R +I + + ++ S++ +NG + R +AY I+ R+ Y +N+
Sbjct: 10 LYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYHIVNVE 69
Query: 67 SPP-AAIHEMKRKMRIDENVLRSLTLLVDS 95
+ A+ E R +I+ ++LR + + +D+
Sbjct: 70 ANNDEALKEFDRLSKINGDILRHMIVKLDA 99
>gi|310779634|ref|YP_003967967.1| SSU ribosomal protein S6P [Ilyobacter polytropus DSM 2926]
gi|309748957|gb|ADO83619.1| SSU ribosomal protein S6P [Ilyobacter polytropus DSM 2926]
Length = 92
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 44/92 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++ + + + + ++++ G + G R +AY I K + YY
Sbjct: 1 MRNYEIMYIINPTVMDDARTEVMAKVENILTAAGATNVKAEKWGERKLAYPIEKKQSGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + ++++K+ I E+V+R + +
Sbjct: 61 ILTTFEMDGTKLADVEKKLNITESVMRYIIVK 92
>gi|325295183|ref|YP_004281697.1| 30S ribosomal protein S6 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065631|gb|ADY73638.1| 30S ribosomal protein S6 [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 126
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 1 MK--LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
M+ YE V++LR +S ++I+ I + S ++ GEV +++ G R +AY I +
Sbjct: 1 MREYYYEMVYILRPTMSDEEIEKGIEKVNSYVERYNGEVLHIDKWGRRELAYPINDYDRG 60
Query: 59 YYVFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
YYV I + + M+ RI+E+V+R LT + E
Sbjct: 61 YYVLEYIKTNDRDFVKNMENFFRINEDVIRFLTFRLKPSE 100
>gi|81427623|ref|YP_394620.1| 30S ribosomal protein S6 [Lactobacillus sakei subsp. sakei 23K]
gi|91207917|sp|Q38ZR8|RS6_LACSS RecName: Full=30S ribosomal protein S6
gi|78609262|emb|CAI54309.1| 30S Ribosomal protein S6 [Lactobacillus sakei subsp. sakei 23K]
Length = 98
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +++ + + + ++ ++++NG EV + R +AY I + Y
Sbjct: 5 KYEVTYIISTTLDEESKTALVNRFDGILKDNGAEVVDSKDWSKRRLAYEINNQHEGIYHI 64
Query: 63 MNIASPP-AAIHEMKRKMRIDENVLRSLTLLVD 94
+N+ + A++E R +ID +LR + + +
Sbjct: 65 VNVLADNDEALNEFDRLAKIDGAILRHMIVKRE 97
>gi|255993993|ref|ZP_05427128.1| ribosomal protein S6 [Eubacterium saphenum ATCC 49989]
gi|255993661|gb|EEU03750.1| ribosomal protein S6 [Eubacterium saphenum ATCC 49989]
Length = 95
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++ D +I++ I S+I +GG+ ++ GM+ AY I + YY
Sbjct: 1 MVKYEVMYIIDGDTEESKIEELISMVSSII-NDGGKEVKTDKWGMKRFAYPINYKNEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + + P E+ R+++I+E ++R + + +
Sbjct: 60 VLTSFEAEPDFPKELDRRLKIEEKIIRHMIVNQEE 94
>gi|11467648|ref|NP_050700.1| ribosomal protein S6 [Guillardia theta]
gi|6094139|sp|O78447|RR6_GUITH RecName: Full=30S ribosomal protein S6, chloroplastic
gi|3602973|gb|AAC35634.1| ribosomal protein S6 [Guillardia theta]
Length = 96
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++++ +++ + I YQ L+ E G + + G RT+ Y I+K + A+YV
Sbjct: 5 NSYETLYIVKPELTEDSLAKLIESYQGLLLERGAKNIITQNRGRRTLKYMIKKYKDAHYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLT 90
MN I ++R M+I+E+++R LT
Sbjct: 65 QMNYEGNGEVIQLLERAMKINESIVRFLT 93
>gi|300791095|ref|YP_003771386.1| 30S ribosomal protein S6 [Amycolatopsis mediterranei U32]
gi|299800609|gb|ADJ50984.1| small subunit ribosomal protein S6 [Amycolatopsis mediterranei
U32]
Length = 101
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 49/88 (55%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + + T+ + ++I+ +GG V V+ G R ++Y I+K+ + Y +++
Sbjct: 1 MVILDPTLDERTVAPTLDTFLNVIRTSGGSVEKVDVWGRRRLSYEIKKHAEGIYALLDLN 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S A+ E+ R++ + E VLR+ + +
Sbjct: 61 SSSDAVKELDRQLSLQETVLRTKVMRRE 88
>gi|189499148|ref|YP_001958618.1| 30S ribosomal protein S6 [Chlorobium phaeobacteroides BS1]
gi|226703439|sp|B3EKF9|RS6_CHLPB RecName: Full=30S ribosomal protein S6
gi|189494589|gb|ACE03137.1| ribosomal protein S6 [Chlorobium phaeobacteroides BS1]
Length = 134
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I T+ + +++I +NGG++ V E+G RT+AY I K Y
Sbjct: 5 KLYECTVIINGGLEDDAIAATMDEVRNVIAKNGGDIENVLEVGRRTMAYPIGKQTIGSYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ P+ + ++ R +EN+LR L + H +P L +++ R ++
Sbjct: 65 HIEFRGEPSGLAAIETAFRYNENILRFLIV----HLSTPLLEMRK--RVEKYSVVIGSPE 118
Query: 122 VDRKQHVSEEKPLS 135
++ EE +
Sbjct: 119 DQSEEDQQEESVAA 132
>gi|313681801|ref|YP_004059539.1| SSU ribosomal protein s6p [Sulfuricurvum kujiense DSM 16994]
gi|313154661|gb|ADR33339.1| SSU ribosomal protein S6P [Sulfuricurvum kujiense DSM 16994]
Length = 127
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 64/102 (62%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE++ +++ ++ ++IK+TI + +I NGGE+ + +GM+ +AY I KN + Y+
Sbjct: 1 MRHYENLVIVKPTLTEEEIKNTIALVEEVITANGGEIVARDAMGMKKLAYPIEKNARGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
M + PAAI E++R+ RI+E +LR +T+ DS +
Sbjct: 61 YVMYYKAAPAAIAEIERRFRINEEILRFVTMKYDSKREIAAW 102
>gi|149071980|ref|YP_001293512.1| ribosomal protein S6 [Rhodomonas salina]
gi|134302931|gb|ABO70735.1| ribosomal protein S6 [Rhodomonas salina]
Length = 99
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++++ ++S + I YQ L+ E G + + G R + Y I K R Y+ M
Sbjct: 8 YETIYIIKPNLSEDNLLKIIENYQGLLIERGAKNIVTQNRGRRGLKYLINKFRDGVYIQM 67
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLL 92
N + + +++ MRI+E+V+R LT
Sbjct: 68 NYEANGEVVDFIEKSMRINEDVIRFLTTR 96
>gi|15605535|ref|NP_220321.1| 30S ribosomal protein S6 [Chlamydia trachomatis D/UW-3/CX]
gi|76789544|ref|YP_328630.1| 30S ribosomal protein S6 [Chlamydia trachomatis A/HAR-13]
gi|166154143|ref|YP_001654261.1| 30S ribosomal protein S6 [Chlamydia trachomatis 434/Bu]
gi|166155018|ref|YP_001653273.1| 30S ribosomal protein S6 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803232|ref|YP_002888426.1| 30S ribosomal protein S6 [Chlamydia trachomatis B/Jali20/OT]
gi|237805153|ref|YP_002889307.1| 30S ribosomal protein S6 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311637|ref|ZP_05354207.1| 30S ribosomal protein S6 [Chlamydia trachomatis 6276]
gi|255317938|ref|ZP_05359184.1| 30S ribosomal protein S6 [Chlamydia trachomatis 6276s]
gi|255349201|ref|ZP_05381208.1| 30S ribosomal protein S6 [Chlamydia trachomatis 70]
gi|255503738|ref|ZP_05382128.1| 30S ribosomal protein S6 [Chlamydia trachomatis 70s]
gi|255507419|ref|ZP_05383058.1| 30S ribosomal protein S6 [Chlamydia trachomatis D(s)2923]
gi|301335383|ref|ZP_07223627.1| 30S ribosomal protein S6 [Chlamydia trachomatis L2tet1]
gi|7388215|sp|O84807|RS6_CHLTR RecName: Full=30S ribosomal protein S6
gi|91207908|sp|Q3KKP0|RS6_CHLTA RecName: Full=30S ribosomal protein S6
gi|226703440|sp|B0B928|RS6_CHLT2 RecName: Full=30S ribosomal protein S6
gi|226703441|sp|B0BAQ7|RS6_CHLTB RecName: Full=30S ribosomal protein S6
gi|3329267|gb|AAC68396.1| S6 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76168074|gb|AAX51082.1| SSU ribosomal protein S6P [Chlamydia trachomatis A/HAR-13]
gi|165930131|emb|CAP03615.1| SSU ribosomal protein S6P [Chlamydia trachomatis 434/Bu]
gi|165931006|emb|CAP06569.1| SSU ribosomal protein S6P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273453|emb|CAX10368.1| SSU ribosomal protein S6P [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274466|emb|CAX11261.1| SSU ribosomal protein S6P [Chlamydia trachomatis B/Jali20/OT]
gi|289525846|emb|CBJ15327.1| SSU ribosomal protein S6P [Chlamydia trachomatis Sweden2]
gi|296435428|gb|ADH17606.1| 30S ribosomal protein S6 [Chlamydia trachomatis E/150]
gi|296436352|gb|ADH18526.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/9768]
gi|296437283|gb|ADH19453.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/11222]
gi|296438211|gb|ADH20372.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/11074]
gi|296439145|gb|ADH21298.1| 30S ribosomal protein S6 [Chlamydia trachomatis E/11023]
gi|297140712|gb|ADH97470.1| 30S ribosomal protein S6 [Chlamydia trachomatis G/9301]
gi|297748929|gb|ADI51475.1| SSU ribosomal protein S6P [Chlamydia trachomatis D-EC]
gi|297749809|gb|ADI52487.1| SSU ribosomal protein S6P [Chlamydia trachomatis D-LC]
Length = 112
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + S I GGEV +++ G + +AY IR R+ YY F
Sbjct: 8 LYEGAYVFSVTLSEDARRKALEKVTSGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYYF 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P AI E+ R+ ++E++LR +TL + ++
Sbjct: 68 IYFTVAPEAIAELWREYHLNEDLLRFMTLKASAVKE 103
>gi|167462795|ref|ZP_02327884.1| 30S ribosomal protein S6 [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 70
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
+Q +I NGGE+ + +G R +AY I+K R +YV +N + P + E+ R M+I + +
Sbjct: 1 FQGIITNNGGEITKHDVMGKRRLAYEIKKFRDGHYVLVNFTAEPEVVKELDRVMKISDEI 60
Query: 86 LRSLTL 91
+R L +
Sbjct: 61 IRYLIV 66
>gi|269925894|ref|YP_003322517.1| ribosomal protein S6 [Thermobaculum terrenum ATCC BAA-798]
gi|269789554|gb|ACZ41695.1| ribosomal protein S6 [Thermobaculum terrenum ATCC BAA-798]
Length = 98
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIRKNRK 57
MK YE + ++ ++I + + + I +GGE + G R +AY IRK+ +
Sbjct: 1 MKDYELMVIIDPTTPDEEIPNVLDTIKQNIAAHGGEAGEPDASPPWGRRRLAYPIRKHNE 60
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+Y + P+ + R +++++ ++R L D
Sbjct: 61 GFYAVLRFRLSPSESRNLDRDLKLNDRIMRFLITRTDK 98
>gi|62185392|ref|YP_220177.1| 30S ribosomal protein S6 [Chlamydophila abortus S26/3]
gi|329943158|ref|ZP_08291932.1| ribosomal protein S6 [Chlamydophila psittaci Cal10]
gi|332287740|ref|YP_004422641.1| 30S ribosomal protein S6 [Chlamydophila psittaci 6BC]
gi|81312458|sp|Q5L565|RS6_CHLAB RecName: Full=30S ribosomal protein S6
gi|62148459|emb|CAH64229.1| putative 30S ribosomal protein S6 [Chlamydophila abortus S26/3]
gi|313848311|emb|CBY17314.1| putative 30S ribosomal protein S6 [Chlamydophila psittaci RD1]
gi|325506437|gb|ADZ18075.1| 30S ribosomal protein S6 [Chlamydophila psittaci 6BC]
gi|328814705|gb|EGF84695.1| ribosomal protein S6 [Chlamydophila psittaci Cal10]
gi|328914994|gb|AEB55827.1| ribosomal protein S6 [Chlamydophila psittaci 6BC]
Length = 112
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 8 LYEGAYVFSVTLSEEARRKALEKVTSGITNYGGEILKIHDQGRKKLAYTIRGAREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P I E+ ++ ++E++LR LTL D+ ++
Sbjct: 68 IYFTVVPGVIAELWKEYHLNEDLLRFLTLKTDAVKE 103
>gi|313884300|ref|ZP_07818063.1| ribosomal protein S6 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620453|gb|EFR31879.1| ribosomal protein S6 [Eremococcus coleocola ACS-139-V-Col8]
Length = 99
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE ++++R D++ K+ + ++ S++ +NG E+ + R AY I ++ Y +
Sbjct: 7 YEILYIIRPDLADDAKKELVERFDSILTDNGSEIIESKDWAKRRFAYEINDYKEGIYHLI 66
Query: 64 NIAS-PPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ + I E R I+ ++LR + V+
Sbjct: 67 HLKATDSKGIDEFDRLSLINRDILRHMITKVE 98
>gi|15834804|ref|NP_296563.1| 30S ribosomal protein S6 [Chlamydia muridarum Nigg]
gi|270284970|ref|ZP_06194364.1| 30S ribosomal protein S6 [Chlamydia muridarum Nigg]
gi|301336367|ref|ZP_07224569.1| 30S ribosomal protein S6 [Chlamydia muridarum MopnTet14]
gi|13959511|sp|Q9PLC1|RS6_CHLMU RecName: Full=30S ribosomal protein S6
gi|7190221|gb|AAF39058.1| ribosomal protein S6 [Chlamydia muridarum Nigg]
Length = 112
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + S I GGEV +++ G + +AY IR R+ YY F
Sbjct: 8 LYEGAYVFSVTLSEDARRKALEKVTSGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYYF 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P AI E+ R+ ++E++LR +TL + ++
Sbjct: 68 IYFTVAPEAISELWREYHLNEDLLRFMTLKASAVKE 103
>gi|297621052|ref|YP_003709189.1| 30S ribosomal protein S6 [Waddlia chondrophila WSU 86-1044]
gi|297376353|gb|ADI38183.1| 30S ribosomal protein S6 [Waddlia chondrophila WSU 86-1044]
Length = 114
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
LYE ++++ +S + + Q+ I GGE+ V+E G + +AY I +R+ +Y
Sbjct: 7 NLYEGMYIISATLSEDARSKALERVQNEITSRGGEIHKVHEQGKKRMAYEIDGHREGHYY 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + PAAI E+ + + E+++R +TL + +
Sbjct: 67 VIYFSVSPAAISEVWNEYHLHEDLVRFITLRTEKVLEK 104
>gi|256829609|ref|YP_003158337.1| 30S riboosomal protein S6 [Desulfomicrobium baculatum DSM 4028]
gi|256578785|gb|ACU89921.1| ribosomal protein S6 [Desulfomicrobium baculatum DSM 4028]
Length = 105
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + LL ++ ++ ++ + + ++++ GG V V++ G++ AY +RK + Y
Sbjct: 2 MTRYEELILLSPELGVEECREIVNNFSAIVEREGGTVLKVDDWGVKDTAYPVRKFNRGRY 61
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
V M + P A+ E++R +RI + V + +T+ + ++P +
Sbjct: 62 VRMEMNMPGKAVAELERNVRITDGVFKFITVRL---AETPAAATEE 104
>gi|291542455|emb|CBL15565.1| SSU ribosomal protein S6P [Ruminococcus bromii L2-63]
Length = 98
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V ++ + I+ + ++++LI+++ ++ V+E G R +AY I K + YYV
Sbjct: 5 ANYETVMIISMKKGEEGIQAIVEKFKALIEKH-ATLKNVDEWGKRKLAYLINKESEGYYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ S E+ R +I E V+RS+ + +
Sbjct: 64 LFDFESEAEFPAELDRIYKITEGVMRSMIIKKE 96
>gi|194335286|ref|YP_002017080.1| ribosomal protein S6 [Pelodictyon phaeoclathratiforme BU-1]
gi|226695110|sp|B4SB42|RS6_PELPB RecName: Full=30S ribosomal protein S6
gi|194307763|gb|ACF42463.1| ribosomal protein S6 [Pelodictyon phaeoclathratiforme BU-1]
Length = 134
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I+K YY
Sbjct: 5 KLYECTLIIDGGLQDEAIAAAMALVQRVITEKGGSISSVLEIGRRKTAYPIKKKTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + + I E+++ +R +E++LR L + H S L +++
Sbjct: 65 HIEFTAATSVIAEVEKVIRYEEDLLRYLII----HLTSALLEMRKR 106
>gi|331003442|ref|ZP_08326941.1| 30S ribosomal protein S6 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412488|gb|EGG91877.1| 30S ribosomal protein S6 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 95
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +L + + + + Q+ I GG V V++ G + AY I K ++ +Y F+
Sbjct: 5 YELALVLNGKLEDDARAEALEKVQNYITRFGGSVVNVDDWGKKRFAYDINKQKEGFYYFI 64
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLV 93
S +E++ +RI E+V+R L +
Sbjct: 65 KFQSENNNCPNELEANVRIMESVVRYLVVKQ 95
>gi|91204545|emb|CAJ70773.1| similar to 30S ribosomal subunit protein S6 [Candidatus Kuenenia
stuttgartiensis]
Length = 137
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 61/122 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+LYE +FL+ ++ + ++ +NG E+ + G + +AY+I+ +++ Y
Sbjct: 1 MRLYEGLFLIDNVPANSDWDGVVKSIHDILAKNGAEILKTEKWGEKKLAYKIKSHKRGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ ++ + +I +MKR ++ E ++RSL L E+ I+ D ++ P+
Sbjct: 61 LLIHFNAENTSITQMKRDFQLSEFLIRSLILRDTVIEELSAAGIEEGFSDKEAEKEPKTE 120
Query: 121 NV 122
V
Sbjct: 121 EV 122
>gi|289551781|ref|YP_003472685.1| SSU ribosomal protein S6p [Staphylococcus lugdunensis HKU09-01]
gi|315660047|ref|ZP_07912905.1| 30S ribosomal protein S6 [Staphylococcus lugdunensis M23590]
gi|289181312|gb|ADC88557.1| SSU ribosomal protein S6p [Staphylococcus lugdunensis HKU09-01]
gi|315494948|gb|EFU83285.1| 30S ribosomal protein S6 [Staphylococcus lugdunensis M23590]
Length = 98
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + A E +R +I+++++R + + D
Sbjct: 61 NIVRIKTDNNRATDEFQRLAKINDDIIRYIVIRED 95
>gi|269837480|ref|YP_003319708.1| 30S ribosomal protein S6 [Sphaerobacter thermophilus DSM 20745]
gi|269786743|gb|ACZ38886.1| ribosomal protein S6 [Sphaerobacter thermophilus DSM 20745]
Length = 109
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRKNRKAYYVFMN 64
L+ +++ + + + +LI ++GGEV V G R +AY I K R A YV +
Sbjct: 1 MLISPEVTDEALTAEVDGISALIAQHGGEVTHVKRDTPWGRRRLAYPINKFRDATYVLYH 60
Query: 65 IASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
P+ I E++R ++++E V+R L + +
Sbjct: 61 FNCAPSRIIEIERDLKLNERVIRYLLIRQE 90
>gi|269792264|ref|YP_003317168.1| 30S ribosomal protein S6 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099899|gb|ACZ18886.1| ribosomal protein S6 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 94
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L D+ + + +++ G EV V+ G R +AY I K + Y
Sbjct: 1 MRPYELVTILTADLEDP--RSAAEELAEVLKSQGAEVEKVDLWGKRRLAYPISKKTEGVY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V N P+ I EM+R +R+ V+R L + D
Sbjct: 59 VLYNFKQKPSMIKEMERVLRLKPQVMRHLVVARDE 93
>gi|289523471|ref|ZP_06440325.1| ribosomal protein S6 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503163|gb|EFD24327.1| ribosomal protein S6 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 88
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ L+ D+ +++K + + +I+ GGE + G R +AY + K + YY +
Sbjct: 1 MVLIHPDV--EEVKAQVDEISEVIKGLGGEFHKSDIWGKRRLAYPVEKQVEGYYALIEFD 58
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
P+ I E+ R +++ + VLR L + +D
Sbjct: 59 LEPSQIGEVDRLLKLRDQVLRHLIVRLDE 87
>gi|116515285|ref|YP_802914.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285319|sp|Q056X8|RS6_BUCCC RecName: Full=30S ribosomal protein S6
gi|116257139|gb|ABJ90821.1| 30S ribosomal protein S6 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 127
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + ++ + +++I I +Y LI G + + G R+++Y I+ +KA+Y
Sbjct: 1 MRHYEIILMINPE-KNKKIFIIIEEYNKLIHMYKGIIHRFEDWGKRSLSYTIKNLKKAHY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
MNI I E++ + + N++R L + + ++ + + +
Sbjct: 60 FLMNIEVSSECIKELENSFKFNINIIRYFILTRTKAHKKISPILKNKEENKKE 112
>gi|289547947|ref|YP_003472935.1| ribosomal protein S6 [Thermocrinis albus DSM 14484]
gi|289181564|gb|ADC88808.1| ribosomal protein S6 [Thermocrinis albus DSM 14484]
Length = 112
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V + + +S ++++ + + + I + GG++ + G++ +AY I + + Y
Sbjct: 10 RHYESVVVFKPTLSEEEVQRRLQEVREFITKKGGQILEEQDWGLKQLAYPINRFQHGRYY 69
Query: 62 FMNIASP-PAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
I S P +E+ +I+++V+R L + V +
Sbjct: 70 LFLIRSENPELPNELDFFYKINDDVIRWLNIKVKRQTEK 108
>gi|29840575|ref|NP_829681.1| 30S ribosomal protein S6 [Chlamydophila caviae GPIC]
gi|33301537|sp|Q821W7|RS6_CHLCV RecName: Full=30S ribosomal protein S6
gi|29834925|gb|AAP05559.1| ribosomal protein S6 [Chlamydophila caviae GPIC]
Length = 112
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 8 LYEGAYVFSVTLSEEARRKALEKVTSGITNYGGEILKIHDQGRKKLAYTIRGAREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P I E+ ++ ++E++LR LTL D+ ++
Sbjct: 68 IYFTVVPGVIAELWKEYHLNEDLLRFLTLKADAVKE 103
>gi|291458691|ref|ZP_06598081.1| ribosomal protein S6 [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418608|gb|EFE92327.1| ribosomal protein S6 [Oribacterium sp. oral taxon 078 str. F0262]
Length = 126
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV-RLVNELGMRTIAYRIRKNRKAY 59
M YE +L +S ++ I + + I G V + E G + +AY I+ ++ Y
Sbjct: 12 MSQYELCVVLSAKLSDEERAAAIEKIKEYISRYNGVVGEKIEEWGKKRLAYEIQHMKEGY 71
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y F+ +E++ ++RI E V+R L + +
Sbjct: 72 YYFIPFTGDRNTPNELENQVRIMEAVIRYLVVKPEE 107
>gi|261749386|ref|YP_003257071.1| 30S ribosomal protein S6 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497478|gb|ACX83928.1| 30S ribosomal protein S6 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 116
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 49/94 (52%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE++ ++ +S Q K T +Y++ + + G++ G++ +AY I+K + Y
Sbjct: 3 RHYENIMIITPILSDDQAKKTAKEYENYLIQKNGKIVHQEHWGLKKLAYPIQKKQSGCYH 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +++ K+R DE +LR +T+ ++
Sbjct: 63 LFEFLLSSNLVSDLELKLRQDERILRFITVKLNK 96
>gi|291532584|emb|CBL05697.1| SSU ribosomal protein S6P [Megamonas hypermegale ART12/1]
Length = 83
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+ + I ++ +LI NGG + + G + +AY I+ +Y + P
Sbjct: 1 MEEEATNAVIEKFSNLIVANGGTIDKEDRWGKKRLAYEIKDCTDGFYCLFEYTAEPTCSA 60
Query: 74 EMKRKMRIDENVLRSLTLLVDS 95
E+ R M+I + VL+ + + D
Sbjct: 61 ELDRVMKITDEVLKHMIVREDE 82
>gi|110598898|ref|ZP_01387147.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
gi|110339489|gb|EAT58015.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
Length = 133
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + + I + Q +I E GG + V E+G R AY I+K YY
Sbjct: 5 KLYECTVIIDGGLQDEAITAAMELVQRVITEKGGSISGVLEIGRRKTAYPIKKRTIGYYA 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ P I E+++ +R +E++LR L + + L +++
Sbjct: 65 HIEFTGAPGVIAEIEKVLRYEEDLLRYLIIQL----TGALLEMRKR 106
>gi|315652550|ref|ZP_07905532.1| 30S ribosomal protein S6 [Eubacterium saburreum DSM 3986]
gi|315485193|gb|EFU75593.1| 30S ribosomal protein S6 [Eubacterium saburreum DSM 3986]
Length = 95
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +L + + + + Q+ I GG + V++ G + AY I K ++ +Y F+
Sbjct: 5 YELALVLNGKLEDDARAEALEKVQNYITRFGGSIVNVDDWGKKKFAYDINKQKEGFYYFI 64
Query: 64 NIASP-PAAIHEMKRKMRIDENVLRSLTLLV 93
S +E++ +RI E V+R L +
Sbjct: 65 KFQSEDNNCPNELEANVRIMEPVVRYLVVKQ 95
>gi|70727627|ref|YP_254543.1| 30S ribosomal protein S6 [Staphylococcus haemolyticus JCSC1435]
gi|82581624|sp|Q4L340|RS6_STAHJ RecName: Full=30S ribosomal protein S6
gi|68448353|dbj|BAE05937.1| 30S ribosomal protein S6 [Staphylococcus haemolyticus JCSC1435]
Length = 98
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R +I K + ++ ++ G EV + G R +AY I ++ +Y
Sbjct: 1 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFY 60
Query: 61 VFMNIASPPA-AIHEMKRKMRIDENVLRSLTLLVD 94
+ I + A E +R +I ++++R + + D
Sbjct: 61 NIVRIKTDNNRATDEFQRLAKISDDIIRYIVIRED 95
>gi|15618860|ref|NP_225146.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae CWL029]
gi|15836484|ref|NP_301008.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae J138]
gi|16752079|ref|NP_445445.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae AR39]
gi|33242319|ref|NP_877260.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae TW-183]
gi|7388222|sp|Q9Z6V5|RS6_CHLPN RecName: Full=30S ribosomal protein S6
gi|4377276|gb|AAD19089.1| S6 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189820|gb|AAF38693.1| ribosomal protein S6 [Chlamydophila pneumoniae AR39]
gi|8979325|dbj|BAA99159.1| S6 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236830|gb|AAP98917.1| 30S ribosomal protein S6 [Chlamydophila pneumoniae TW-183]
gi|269302743|gb|ACZ32843.1| ribosomal protein S6 [Chlamydophila pneumoniae LPCoLN]
Length = 112
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY F
Sbjct: 8 LYEGAYVFSVTLSEEARRKALDKVISGITNYGGEIHKIHDQGRKKLAYTIRGAREGYYYF 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + P AI E+ ++ ++E++LR +TL DS ++
Sbjct: 68 IYFSVSPGAITELWKEYHLNEDLLRFMTLRADSVKE 103
>gi|154508268|ref|ZP_02043910.1| hypothetical protein ACTODO_00764 [Actinomyces odontolyticus ATCC
17982]
gi|293191180|ref|ZP_06609113.1| ribosomal protein S6 [Actinomyces odontolyticus F0309]
gi|153797902|gb|EDN80322.1| hypothetical protein ACTODO_00764 [Actinomyces odontolyticus ATCC
17982]
gi|292820601|gb|EFF79570.1| ribosomal protein S6 [Actinomyces odontolyticus F0309]
Length = 90
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L I + + + +Y + + NGG V V+ G R +AY I K + YV +++
Sbjct: 1 MVILDPSIDERTVAPMMEKYLAPVAANGGSVENVDVWGKRRLAYDILKRSEGIYVVIDMT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ P E+ R+M IDE +LR+ L D+H
Sbjct: 61 TTPEVALEINRRMGIDETILRTKLLRPDAH 90
>gi|327399729|ref|YP_004340598.1| 30S ribosomal protein S6 [Hippea maritima DSM 10411]
gi|327182358|gb|AEA34539.1| 30S ribosomal protein S6 [Hippea maritima DSM 10411]
Length = 112
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE ++++R + ++K I I+ GGE+ R++AY I+K ++ YY
Sbjct: 1 MRYYELLYIVRPTMGEDELKAFIEGVAERIKAEGGEILKNEVWQKRSLAYPIKKFKQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ ++ S ++ +R+ E+VLR +T
Sbjct: 61 ILVHYKSEADTPKRIEEFLRLKEDVLRFIT 90
>gi|194246578|ref|YP_002004217.1| 30S ribosomal protein S6 [Candidatus Phytoplasma mali]
gi|254765447|sp|B3R0K3|RS6_PHYMT RecName: Full=30S ribosomal protein S6
gi|193806935|emb|CAP18367.1| 30S ribosomal protein S6 [Candidatus Phytoplasma mali]
Length = 94
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 54/92 (58%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE ++++R +I ++IK + + N ++ ELG++ +AY I K+ K YY
Sbjct: 1 MKKYEILYIMRPNIGDEEIKKNVETINKIFYNNENKIIQSKELGLKDLAYCIDKHYKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
V M + + P I E R ++I+E+++RS+ +
Sbjct: 61 VSMFLNAMPQMIEEFNRVVKINEDIIRSIVIK 92
>gi|310830127|ref|YP_003962484.1| ribosomal protein S6 [Eubacterium limosum KIST612]
gi|308741861|gb|ADO39521.1| ribosomal protein S6 [Eubacterium limosum KIST612]
Length = 95
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
M+ YE VF+L+ ++ + I + + I GEV V+E G R +AY I +K + Y
Sbjct: 1 MRAYETVFVLQPELEKEVTDSWIEKVKGAIAAA-GEVGTVDEWGKRKLAYEIDKKYTEGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
YV + + + + + +++E +RS+ + +
Sbjct: 60 YVVIEFKAEQSVLDSLDYLFKMNEEFIRSIIVKKEK 95
>gi|262341103|ref|YP_003283958.1| 30S ribosomal protein S6 [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272440|gb|ACY40348.1| 30S ribosomal protein S6 [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 116
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE++ ++ +S Q K+T +Y++ + + G++ G++ +AY I+K + Y
Sbjct: 3 KHYENIMIITPILSDDQAKETAKEYENYLIQKKGKIVYQEHWGLKKLAYPIQKKQSGCYH 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
P + +++ K+R DE++LR LT+ ++ + R + + +
Sbjct: 63 LFEFLLNPNLVSDLELKLRQDEHILRFLTIKLNKYGIEYA-----ERRRKKLFKKDEE 115
>gi|260437870|ref|ZP_05791686.1| ribosomal protein S6 [Butyrivibrio crossotus DSM 2876]
gi|292809896|gb|EFF69101.1| ribosomal protein S6 [Butyrivibrio crossotus DSM 2876]
Length = 95
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + L+ + GG + V+E G + +AY I+K +A+Y
Sbjct: 1 MNKYELTVVVNAMTEDDVRTAVIEKVKDLVAKCGGTITAVDEAGKKKLAYEIQKMNEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F +I + + + ++RI +NVLR L + V+
Sbjct: 61 YFFSIDAVAEFPNAIASELRIMDNVLRFLCVNVEE 95
>gi|89898003|ref|YP_515113.1| 30S ribosomal protein S6 [Chlamydophila felis Fe/C-56]
gi|123483774|sp|Q255S0|RS6_CHLFF RecName: Full=30S ribosomal protein S6
gi|89331375|dbj|BAE80968.1| 30S ribosomal protein S6 [Chlamydophila felis Fe/C-56]
Length = 112
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + + S I GGE+ +++ G + +AY IR R+ YY
Sbjct: 8 LYEGAYVFSVTLSEEARRKALEKVTSGIINYGGEILKIHDQGRKKLAYTIRGAREGYYYL 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + P I E+ ++ ++E++LR LTL D+ ++
Sbjct: 68 IYFSVVPGVIAELWKEYHLNEDLLRFLTLKTDAVKE 103
>gi|229007787|ref|ZP_04165373.1| 30S ribosomal protein S6 [Bacillus mycoides Rock1-4]
gi|228753464|gb|EEM02916.1| 30S ribosomal protein S6 [Bacillus mycoides Rock1-4]
Length = 83
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+ + K + ++ ++ NG E+ E G R +AY I R +Y+ +N+ S A+
Sbjct: 1 MEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLRDGFYMILNVNSDAEAVK 60
Query: 74 EMKRKMRIDENVLRSLTLLVDS 95
E R +I+E++LR + + +
Sbjct: 61 EFDRLAKINEDILRHIVVKEEE 82
>gi|189501829|ref|YP_001957546.1| 30S ribosomal protein S6 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497270|gb|ACE05817.1| hypothetical protein Aasi_0399 [Candidatus Amoebophilus asiaticus
5a2]
Length = 127
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE VF+L ++S+Q + TI ++++ + E E+ +G++ +AY I+ Y
Sbjct: 4 KNYETVFVLTPVLTSEQTEGTITKFRNFLLEKEVEIVHEEAIGLKKLAYPIQHKNTGIYH 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + P I ++ + DEN++R LT ++D
Sbjct: 64 LIEFKAKPEVIATLEIAYKRDENIIRFLTFVLDK 97
>gi|269118804|ref|YP_003306981.1| ribosomal protein S6 [Sebaldella termitidis ATCC 33386]
gi|268612682|gb|ACZ07050.1| ribosomal protein S6 [Sebaldella termitidis ATCC 33386]
Length = 94
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 46/94 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F++ ++ ++ + I + ++ +G + G R +AY I K YY
Sbjct: 1 MRNYEIMFIVSTQLTEEEKQTGIKFVEDTLKASGADSVKTEIWGDRKLAYPINKKDNGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I+E++++ + + D
Sbjct: 61 VLTTFQMDGTRLTEVEGKLNINESLMKYMIVKND 94
>gi|227487712|ref|ZP_03918028.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541419|ref|ZP_03971468.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092333|gb|EEI27645.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182807|gb|EEI63779.1| 30S ribosomal protein S6 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 89
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ +L + + ++ +Y ++++ GG V V+ R +AY I K + YV +++
Sbjct: 1 MVILDPSQDERTVAPSLDKYLEVVRKEGGSVDKVDVWPKRRLAYPINKKEEGIYVVLDLT 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ E+ R + I E VLR+ L D
Sbjct: 61 CESDTVLELDRLLGISEMVLRTKVLRGD 88
>gi|154249362|ref|YP_001410187.1| 30S ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
gi|189045467|sp|A7HKU7|RS6_FERNB RecName: Full=30S ribosomal protein S6
gi|154153298|gb|ABS60530.1| ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
Length = 124
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
M++YE +F+++ D+S ++ + + ++E +V V+ G+R +AY+I K +
Sbjct: 1 MRIYETMFIIKPDVSEEERNKLVENVKKFLEERVKAQVETVDRWGIRKLAYKIGKYFEGD 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
Y M S + +++ ++ +R T R D + + R R
Sbjct: 61 YTVMYFRSNGQGLDQLENYFKVHPEFMRWQTFR-------------REDLEKKERRAARQ 107
Query: 120 RNVDRKQHVSEEK 132
+ + +++VS+E+
Sbjct: 108 KTGETQENVSQEE 120
>gi|317499406|ref|ZP_07957673.1| ribosomal protein S6 [Lachnospiraceae bacterium 5_1_63FAA]
gi|291559995|emb|CBL38795.1| SSU ribosomal protein S6P [butyrate-producing bacterium SSC/2]
gi|316893278|gb|EFV15493.1| ribosomal protein S6 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 95
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L I ++ + + Q++I G + V+E G + +AY I+K ++ YY
Sbjct: 1 MMKYELALVLSAKIEDEERAAMVEKVQAMITTAGAAITNVDEWGKKQLAYEIQKMKEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ E++ ++RI+E VLR L + D+
Sbjct: 61 YFIQFEGETTVPAELEERLRIEETVLRFLCVKQDA 95
>gi|262037249|ref|ZP_06010731.1| ribosomal protein S6 [Leptotrichia goodfellowii F0264]
gi|261748721|gb|EEY36078.1| ribosomal protein S6 [Leptotrichia goodfellowii F0264]
Length = 94
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L +S ++ K I + + + G G R +AY I+K YY
Sbjct: 1 MKNYEIMFILSTQLSDEEKKAGIALVEDTLTKAGAAELKTEVWGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + E++ K+ I E++L+ + + D
Sbjct: 61 VLTLFQIDGTKLPEVEAKLNISESILKYMIVRND 94
>gi|194333004|ref|YP_002014864.1| 30S ribosomal protein S6 [Prosthecochloris aestuarii DSM 271]
gi|194310822|gb|ACF45217.1| ribosomal protein S6 [Prosthecochloris aestuarii DSM 271]
Length = 135
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
KLYE ++ + I+ + + +++I G ++ V E+G R +AY I K Y
Sbjct: 9 KLYECTVIINGGLEDDAIESAMAEVRNVITSTGSDIDNVLEVGRRKMAYPISKQTIGSYA 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + + I +++ R DEN+LR L + + SP L +++
Sbjct: 69 HIEFNAEASVIAGIEKAFRYDENILRFLIIQL----SSPVLEMRKR 110
>gi|94995010|ref|YP_603108.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10750]
gi|94548518|gb|ABF38564.1| SSU ribosomal protein S6P [Streptococcus pyogenes MGAS10750]
Length = 84
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++++R +I + + ++ S++ +NG V + R +AY I R+ Y
Sbjct: 1 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEINDFREGLY 60
Query: 61 VFMNIAS-PPAAIHEMKRKMR 80
+N+ + AA++E R +
Sbjct: 61 HIVNLEATDAAALNEFDRSFK 81
>gi|90994550|ref|YP_537040.1| ribosomal protein S6 [Porphyra yezoensis]
gi|122194661|sp|Q1XDC8|RR6_PORYE RecName: Full=30S ribosomal protein S6, chloroplastic
gi|90819114|dbj|BAE92483.1| 30S ribosomal protein S6 [Porphyra yezoensis]
Length = 109
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 47/100 (47%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V++L+ D++ + I Y+S++ G + ++ G R ++Y I YV
Sbjct: 10 NCYETVYILKSDLNEDKTLSIINDYKSMLTNGGAKNIVLQHRGRRHLSYTINDYHDGIYV 69
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+N + ++ +R D+N++R LT + + +
Sbjct: 70 QVNYEGNGQLVKSFEKSLRFDDNIIRYLTNKQKRNIKKDS 109
>gi|315273280|ref|ZP_07869268.1| 30S ribosomal protein S6 [Listeria marthii FSL S4-120]
gi|313616101|gb|EFR89229.1| 30S ribosomal protein S6 [Listeria marthii FSL S4-120]
Length = 87
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 10 LRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP- 68
+R +I + K + ++ ++ +NG E+ E G R +AY I R +Y + + +
Sbjct: 1 IRPNIEEDEKKAVVERFDGILTDNGAEIIESKEWGKRRLAYEINDYRDGFYHIVKLNADK 60
Query: 69 PAAIHEMKRKMRIDENVLRSLTLLVDS 95
+I+E R +I ++++R + + ++
Sbjct: 61 ADSINEFDRLAKISDDIIRHMVIKEEA 87
>gi|282882860|ref|ZP_06291465.1| ribosomal protein S6 [Peptoniphilus lacrimalis 315-B]
gi|300813421|ref|ZP_07093769.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297271|gb|EFA89762.1| ribosomal protein S6 [Peptoniphilus lacrimalis 315-B]
gi|300512471|gb|EFK39623.1| ribosomal protein S6 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 94
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + D+ ++ + + + + +++++ G++ ++E GM+ +AY I ++AYY
Sbjct: 1 MNKYEAVIMFYPDVEEEKREASFTRIKGIMEKH-GKINNIDEWGMKKLAYEIDYYKEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
F+ P I E+ R RI + ++R + + V+
Sbjct: 60 TFVEFDCDPEEIQEINRIARISDPIMRIMVIKVEK 94
>gi|148657505|ref|YP_001277710.1| 30S ribosomal protein S6 [Roseiflexus sp. RS-1]
gi|148569615|gb|ABQ91760.1| SSU ribosomal protein S6P [Roseiflexus sp. RS-1]
Length = 159
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 2 KLYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRK--- 54
+ YE +F++ +S ++I++ I + I GG + N G R AY IR
Sbjct: 6 RDYELLFIIPPIRMSDEEIRNAIERVSQTITNLGGVITSTNHAPPWGRRKFAYPIRAYVE 65
Query: 55 -------NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTI 104
+ YYV M+ + E++R ++++++VLR L LV+ +P +
Sbjct: 66 GEASRRVFTEGYYVLMHFQMAADRVAELERLLKLNDSVLRYLLTLVEMRGAAPAVVA 122
>gi|116664773|gb|ABK13802.1| ribosomal protein S6 [Coxiella endosymbiont of Amblyomma
americanum]
Length = 105
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
L+ + S Q+ I +YQS+I+E+G + + + G R +AYR+++ KA+Y+ +NI
Sbjct: 1 LIHPN-QSSQVLQMIERYQSMIRESGSRIHRLEDWGRRQLAYRLKEVHKAHYILINIECS 59
Query: 69 PAAIHEMKRKMRIDENVLRS-LTLLVDSHEQSPTLTIQRHDRDD 111
+ ++ ++ ++ + L L P+ +Q +++
Sbjct: 60 GIVLSDLVTAFHYNDAIMTTSLILKRSHAITIPSPVMQGLEKEK 103
>gi|229829469|ref|ZP_04455538.1| hypothetical protein GCWU000342_01559 [Shuttleworthia satelles
DSM 14600]
gi|229791900|gb|EEP28014.1| hypothetical protein GCWU000342_01559 [Shuttleworthia satelles
DSM 14600]
Length = 96
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ I + + + I GG V V E G + +AY I+ +A+Y
Sbjct: 1 MAKYELALVVNAKIEDDARAAVVEKAKGYITRAGGTVTDVEEKGKQKLAYEIQNMGEAFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
++ + + +++ +RI + VLR L + D
Sbjct: 61 YYIQFEAETSVPAQLEGDIRIMDYVLRFLFVRKDEQ 96
>gi|160947596|ref|ZP_02094763.1| hypothetical protein PEPMIC_01531 [Parvimonas micra ATCC 33270]
gi|158446730|gb|EDP23725.1| hypothetical protein PEPMIC_01531 [Parvimonas micra ATCC 33270]
Length = 94
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE VF+ + ++ + + ++ I+ N G + +NE G R +AY I ++ YY
Sbjct: 1 MRKYEGVFIFKPNLEDEVRNQAFDRIKAAIESN-GTITEINEWGNRKLAYEINYIKEGYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ +N + + E++R+ RI + ++R + + ++
Sbjct: 60 IIVNFEAAAEVVAEVERRSRISDAIIRYMVVKQEA 94
>gi|33241323|ref|NP_876265.1| ribosomal protein S6 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|61216288|sp|Q7V9F9|RS6_PROMA RecName: Full=30S ribosomal protein S6
gi|33238853|gb|AAQ00918.1| Ribosomal protein S6 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 210
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +++LR DI +++ + +Y ++++ ++ G R +AY I K+++ YV +
Sbjct: 7 YETMYILRPDIPEDEVEGHLKKYSEVLEKAKAKIIDNQMRGKRRLAYTIGKHKEGIYVQL 66
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVD 123
+ + ++R MR+ E+V+R LT+ + P T + D+ + N
Sbjct: 67 SHTGNGKHVETLERSMRLSEDVIRYLTVK----QYGPLPTKRNTKSQDKEASTTNNENDT 122
Query: 124 RKQHVSEE 131
++ +++
Sbjct: 123 KEVKEAKD 130
>gi|269124214|ref|YP_003306791.1| 30S ribosomal protein S6 [Streptobacillus moniliformis DSM 12112]
gi|268315540|gb|ACZ01914.1| ribosomal protein S6 [Streptobacillus moniliformis DSM 12112]
Length = 93
Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 48/93 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F+L ++ ++ K + + +S++ + G +G R +AY I+K YY
Sbjct: 1 MTNYEIMFILSTQLTEEEKKANVEKVESILTQAGATEVKTEIMGDRKLAYPIKKKENGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + + E+++K+ I E +++ + + +
Sbjct: 61 VLTKFSMDGTQLTEVEKKLNISEYLMKYMIVKL 93
>gi|159901473|ref|YP_001547720.1| 30S ribosomal protein S6 [Herpetosiphon aurantiacus ATCC 23779]
gi|159894512|gb|ABX07592.1| ribosomal protein S6 [Herpetosiphon aurantiacus ATCC 23779]
Length = 109
Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 2 KLYEHVFLLRQDIS-SQQIKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIRKNRK 57
+ YE + +LR D+ +++ TI Q I+ GGEV G R +AY I +
Sbjct: 10 RAYEMMTVLRPDLGGEEELNTTIETIQGYIKAQGGEVASTEQGAPWGRRKLAYPIDDYTE 69
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+Y + + E++R +++ +LR L +
Sbjct: 70 GFYFLTHFTLNADRVTEVERHLKLAPQILRYLLIR 104
>gi|330443832|ref|YP_004376818.1| 30S ribosomal protein S6 [Chlamydophila pecorum E58]
gi|328806942|gb|AEB41115.1| ribosomal protein S6 [Chlamydophila pecorum E58]
Length = 112
Score = 98.5 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++ +S + + + + S I GE+ +++ G + +AY IR R+ YY F
Sbjct: 8 LYEGAYVFSVTLSEEARRKALDKVISGITNYDGEINKIHDQGRKKLAYTIRGAREGYYYF 67
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ P AI E+ R+ ++E++LR + DS ++
Sbjct: 68 IYFTVVPEAIAELWREYHLNEDLLRFMIFKADSVKE 103
>gi|197294289|ref|YP_001798830.1| 30S ribosomal protein S6 [Candidatus Phytoplasma australiense]
gi|226695111|sp|B1V955|RS6_PHYAS RecName: Full=30S ribosomal protein S6
gi|171853616|emb|CAM11487.1| 30S ribosomal protein S6 [Candidatus Phytoplasma australiense]
Length = 93
Score = 98.5 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 49/92 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ + ++K +S+ + + E+G++ +AY I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDNNEVKKINDHLESVFSKKPSTILEKKEIGLKDLAYPINNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + A+ E R ++I E V+R + +
Sbjct: 61 YWFITQTDNEAVLEFNRIVKITEEVIRFIIIK 92
>gi|167766037|ref|ZP_02438090.1| hypothetical protein CLOSS21_00530 [Clostridium sp. SS2/1]
gi|167712117|gb|EDS22696.1| hypothetical protein CLOSS21_00530 [Clostridium sp. SS2/1]
Length = 94
Score = 98.5 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +L I ++ + + Q++I G + V+E G + +AY I+K ++ YY F
Sbjct: 2 KYELALVLSAKIEDEERAAMVEKVQAMITTAGAAITNVDEWGKKQLAYEIQKMKEGYYYF 61
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ E++ ++RI+E VLR L + D+
Sbjct: 62 IQFEGETTVPAELEERLRIEETVLRFLCVKQDA 94
>gi|255636266|gb|ACU18473.1| unknown [Glycine max]
Length = 228
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++L+ + +++ + Q ++E G+V +N+ GMR AY+I+K A+Y+
Sbjct: 141 RHYEVMYLIH-EKHEEEVVAVNEKIQDFLREKKGQVWRLNDWGMRRPAYKIKKANNAHYM 199
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLT 90
+N I++ K + DE V+R L
Sbjct: 200 LINFELDAKYINDFKTLLDQDERVIRHLV 228
>gi|108760551|ref|YP_633232.1| 30S ribosomal protein S6 [Myxococcus xanthus DK 1622]
gi|108464431|gb|ABF89616.1| ribosomal protein S6 [Myxococcus xanthus DK 1622]
Length = 158
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +FL++ D++ + + + ++ GG+V G + + + K +A YV
Sbjct: 11 REYETIFLVKPDLTDDNVDKLKERVRGIVSREGGKVIRFTVWGKKKTLFPVAKQPRAIYV 70
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPTLTIQR----HDRDDRNDRF 116
+ + E++R +R + V R +++ + D + ++ D ++
Sbjct: 71 HTHFLGGAKLVAEIERNLRNLDEVTRYISVKLADEVDPETRPVLEDVKLAGDVEETRPGA 130
Query: 117 PRDRNVDRKQHVSEEK 132
P +R + SEE+
Sbjct: 131 PAEREGGFRSEGSEEQ 146
>gi|312879776|ref|ZP_07739576.1| SSU ribosomal protein S6P [Aminomonas paucivorans DSM 12260]
gi|310783067|gb|EFQ23465.1| SSU ribosomal protein S6P [Aminomonas paucivorans DSM 12260]
Length = 94
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L D+ K +Y +++ G EV + G R +AY I K + Y
Sbjct: 1 MRPYELVTILTADLEDP--KTVAEEYVEVLRGLGAEVEKFDLWGKRRLAYPIAKQNEGVY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V PA I EM+R + + +LR L + D
Sbjct: 59 VLYTFKHDPAQIREMERVLSLKPQILRHLVISRDE 93
>gi|297170211|gb|ADI21249.1| ribosomal protein S6 [uncultured myxobacterium HF0010_08B07]
Length = 94
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL + + + D I + LI +N G++ LG R +AY I A Y
Sbjct: 1 MQKYELMLLLNPN-TMDDVDDFIDSLKKLIADNKGDLLDTKLLGKRQLAYPINNMNYANY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V +++ P ++ ++ K + D+NV R LT+ +
Sbjct: 60 VHLDVNVEPETLNLLEEKFKFDQNVFRHLTVKL 92
>gi|57286811|gb|AAW38905.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus COL]
gi|298693703|gb|ADI96925.1| ribosomal protein S6 [Staphylococcus aureus subsp. aureus ED133]
Length = 92
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
++++R +I K + ++ ++ G EV + G R +AY I + +Y + +
Sbjct: 1 MYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFYNIVRVK 60
Query: 67 SPPA-AIHEMKRKMRIDENVLRSLTLLVDS 95
S A E +R +I ++++R + + D
Sbjct: 61 SDNNKATDEFQRLAKISDDIIRYMVIREDE 90
>gi|302024438|ref|ZP_07249649.1| 30S ribosomal protein S6 [Streptococcus suis 05HAS68]
Length = 100
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPP-AAI 72
+ + + ++ S++ +NG + R +AY I+ R+ Y +N+ + A+
Sbjct: 18 LQKEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYHIVNVEANNDEAL 77
Query: 73 HEMKRKMRIDENVLRSLTLLVDS 95
E R +I+ ++LR + + +D+
Sbjct: 78 KEFDRLSKINGDILRHMIVKLDA 100
>gi|170288134|ref|YP_001738372.1| ribosomal protein S6 [Thermotoga sp. RQ2]
gi|226695296|sp|B1L8K7|RS6_THESQ RecName: Full=30S ribosomal protein S6
gi|170175637|gb|ACB08689.1| ribosomal protein S6 [Thermotoga sp. RQ2]
Length = 128
Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEEREKLVERVKGIIEERVKGKIDKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + E++ RI ++R T R D + + + R++
Sbjct: 67 TVIYFRCDGQHLQELENFYRITPEIIRWQTFR-------------RFDLEKKERKAQREK 113
Query: 121 NVDRKQHVSE 130
SE
Sbjct: 114 AAAEAIESSE 123
>gi|169837077|ref|ZP_02870265.1| SSU ribosomal protein S6P [candidate division TM7 single-cell
isolate TM7a]
Length = 112
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE L+R D+ S I+ I + + ++++ GGE++ + G + +AY+IRK A Y
Sbjct: 1 MRKYELTVLIRPDLESD-IEAPINKVRDIVKKAGGEIKKEDNWGKKKLAYKIRKEDFAIY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
V+M+I P A +++ + I E VLR L +L D Q ++ D
Sbjct: 60 VYMDIILPADAPLKIRNTLNITEEVLRYLLVLADEKTQKLADEDKKSAED 109
>gi|86743197|ref|YP_483597.1| 30S ribosomal protein S6 [Frankia sp. CcI3]
gi|86570059|gb|ABD13868.1| SSU ribosomal protein S6P [Frankia sp. CcI3]
Length = 108
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 56/97 (57%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L D+ + + ++ QY ++++ GG V V+ G R +AY I K+ + Y
Sbjct: 3 RHYELMVILDADLEERTVAPSLDQYLGVVRQGGGVVEKVDVWGRRRLAYEIAKSHEGIYA 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+++ + P + E+ R++ ++E+V+R+ + + ++
Sbjct: 63 VIDLHAEPDVVAELDRQLVLNESVMRTKVIRLPEPKK 99
>gi|223039667|ref|ZP_03609953.1| ribosomal protein S6 [Campylobacter rectus RM3267]
gi|222879050|gb|EEF14145.1| ribosomal protein S6 [Campylobacter rectus RM3267]
Length = 128
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +F+L+ ++ +++ + + ++ +NG + V +G R +AY ++K + Y
Sbjct: 1 MKHYELLFILKPTLTEEEVSAKVDFVKEILTKNGANIASVQTMGTRKLAYTVKKYERGTY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL-TIQRHDRDDRNDRFPRD 119
+ +P AI E++R +RI E +++ LT+ ++ ++ + + + ++ + +
Sbjct: 61 FVVYFEAPTQAIAEVERIIRITEEIIKFLTVKFENKKEIAAWEKMSKGIKLNKKEPKVKA 120
Query: 120 RNVDRKQH 127
Q
Sbjct: 121 EEAPTAQE 128
>gi|167750473|ref|ZP_02422600.1| hypothetical protein EUBSIR_01449 [Eubacterium siraeum DSM 15702]
gi|167656624|gb|EDS00754.1| hypothetical protein EUBSIR_01449 [Eubacterium siraeum DSM 15702]
gi|291557665|emb|CBL34782.1| SSU ribosomal protein S6P [Eubacterium siraeum V10Sc8a]
Length = 97
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V + +K + ++ LI+E+ G + V+E G R +AY I YYV
Sbjct: 7 KYEAVVVFSLKNGEDAVKALVAKFSDLIKEH-GTLVDVDEWGARKLAYEINYETDGYYVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ P E +R + I + VLRSL
Sbjct: 66 YSFDCKPDFPMEFERIINITDGVLRSLV 93
>gi|325679791|ref|ZP_08159365.1| ribosomal protein S6 [Ruminococcus albus 8]
gi|324108606|gb|EGC02848.1| ribosomal protein S6 [Ruminococcus albus 8]
Length = 96
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + + Q + + + ++ +I+ N E +N G R +AY I + YV
Sbjct: 7 NYEAMVIFSQKLDEEGVNALTTKFDDMIKAN-AENVELNVWGKRKLAYEINYESEGTYVL 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ S E++R + I + V+R L
Sbjct: 66 WSFNSKTEFPAELERVLGITDGVIRFLI 93
>gi|110003928|emb|CAK98268.1| putative 30s ribosomal protein s6 [Spiroplasma citri]
Length = 149
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +++L + ++ + + + +++ NGG++ + G++ + Y I+K K YY
Sbjct: 1 MRKYEIMYILNPEATN--LDELESKLHQILEANGGKIEEHGKWGIKDLVYPIKKKTKGYY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE-----QSPTLTIQRHDRDDRNDR 115
+ + + I E R I+++VLR L + + + T ++D+ DR DR
Sbjct: 59 GVLIVNTTSVNIDEFVRISHIEQDVLRILVINTEKEKGYIQSTVYAKTEVKNDKPDR-DR 117
Query: 116 FPRDRNVDRKQHV-----SEEKPL 134
P +R D K+H E KP
Sbjct: 118 KPGNRKPDYKRHEQRSEGEETKPE 141
>gi|241889102|ref|ZP_04776406.1| ribosomal protein S6 [Gemella haemolysans ATCC 10379]
gi|241864351|gb|EER68729.1| ribosomal protein S6 [Gemella haemolysans ATCC 10379]
Length = 95
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIDEEAKKAVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + A+ E R +I ++++R + + ++
Sbjct: 60 YVVELTSATDASTKEFDRLAKISDDIIRHMVVRLEK 95
>gi|161611250|ref|NP_950261.2| 30S ribosomal protein S6 [Onion yellows phytoplasma OY-M]
gi|61216244|sp|Q6YRK5|RS6_ONYPE RecName: Full=30S ribosomal protein S6
Length = 95
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ S+ +K Q++ + ++ NE+G++ +AY I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDSKDVKKINDTLQNVFLQAPNQILEQNEIGLKDLAYLIDNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + + A+ E R ++I E ++R + +
Sbjct: 61 NWLMVKADNDAVLEFNRIVKITEEIIRFIFIKDKE 95
>gi|288572899|ref|ZP_06391256.1| ribosomal protein S6 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568640|gb|EFC90197.1| ribosomal protein S6 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 94
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + LL D+ + + +I + GG+V V+ G R +AY I K + YY
Sbjct: 1 MRPYEMMVLLEADLEDH--SAELDGIKEVIAKLGGDVDKVDIWGKRRLAYPIDKRTEGYY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ P+ EM R + + ++R+L + +D
Sbjct: 59 ALVYFKLDPSKQKEMTRLLGLRTAIVRNLVIRLD 92
>gi|57234185|ref|YP_181762.1| 30S ribosomal protein S6 [Dehalococcoides ethenogenes 195]
gi|91207912|sp|Q3Z7N7|RS6_DEHE1 RecName: Full=30S ribosomal protein S6
gi|57224633|gb|AAW39690.1| ribosomal protein S6 [Dehalococcoides ethenogenes 195]
Length = 109
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V +L D ++++ + I E G VN G R +AY I + + YYV
Sbjct: 15 RDYELVVILTTDTPKEKVEAILEGISKTIAEKDGSFTEVNHWGKRKLAYLIGRYGEGYYV 74
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + + P++I ++ +RI E V+R + + +D
Sbjct: 75 FIKMKAKPSSIRKINADLRISEQVIRHMAINMDEE 109
>gi|315925595|ref|ZP_07921805.1| 30S ribosomal protein S6 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621136|gb|EFV01107.1| 30S ribosomal protein S6 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 95
Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-RKNRKAY 59
MK YE +F+L ++ + I + + +++I++ GEV V+E G R +AY I K Y
Sbjct: 1 MKAYETMFVLVPELEKEAIDAEVARVKAIIEKA-GEVENVDEWGSRKLAYTIDNKYTDGY 59
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
YV ++ + + + ++ I+++ +R + + +
Sbjct: 60 YVVIDFKAENSVLDDLNHLYLINDSYIRDIIIAKEK 95
>gi|307299233|ref|ZP_07579034.1| ribosomal protein S6 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915029|gb|EFN45415.1| ribosomal protein S6 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 157
Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQS-LIQENGGEVRLVNELGMRTIAYRIRK-NRKAY 59
++YE +F++ + ++ + + +++ GG + + G+R +AYR+ K +
Sbjct: 3 RIYETMFIVSPKLDEEERNAMAEKVRDYIVERVGGTIEKFDRWGIRKLAYRVAKGFSEGD 62
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y + + P + ++R I +V R T + E++
Sbjct: 63 YTVVQFRAEPETLDILERFFGITPDVFRWQTFRREDLEKA 102
>gi|270308307|ref|YP_003330365.1| ribosomal protein S6 [Dehalococcoides sp. VS]
gi|270154199|gb|ACZ62037.1| ribosomal protein S6 [Dehalococcoides sp. VS]
Length = 109
Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V +L D ++++ + I E G VN G R +AY I + + YYV
Sbjct: 15 RDYELVVILTTDTPKEKVEAILEGISKTIAEKEGSFTEVNHWGKRKLAYLIGRYGEGYYV 74
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + + P++I ++ +RI E V+R + + +D
Sbjct: 75 FIKMKAKPSSIRKINSDLRISEQVIRHMAINMDEE 109
>gi|219849266|ref|YP_002463699.1| 30S ribosomal protein S6 [Chloroflexus aggregans DSM 9485]
gi|219543525|gb|ACL25263.1| ribosomal protein S6 [Chloroflexus aggregans DSM 9485]
Length = 137
Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 2 KLYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIR---- 53
+ YE V ++ + + I I + + +++ GG+V V+ G R +AY IR
Sbjct: 6 REYELVIIINPLYANEEGITANIDRIKQTVEQLGGQVNTVSQSSPWGRRKLAYPIREYVV 65
Query: 54 ------KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
K + YYVF + + + E+ R +R+++N+LR L +LV++
Sbjct: 66 GEASRRKFTEGYYVFFTLTLNASKVAELDRAIRLNDNILRHLLVLVENATTQAAPI 121
>gi|317057127|ref|YP_004105594.1| 30S ribosomal protein S6 [Ruminococcus albus 7]
gi|315449396|gb|ADU22960.1| ribosomal protein S6 [Ruminococcus albus 7]
Length = 96
Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + + Q + + + ++ +I+ N E +N G R +AY I + YV
Sbjct: 7 NYEAMVIFSQKLDEEGVNALTTKFDDMIKAN-AENVELNVWGKRKLAYAINYETEGTYVL 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ S E++R + I + V+R L
Sbjct: 66 WSFNSKTEFPAELERVLGITDGVIRFLV 93
>gi|55670467|pdb|1VMB|A Chain A, Crystal Structure Of 30s Ribosomal Protein S6 (Tm0603)
From Thermotoga Maritima At 1.70 A Resolution
Length = 140
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 19 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDY 78
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + E++ R+ ++R T R D + + + R++
Sbjct: 79 TVIYFRCDGQNLQELENFYRVTPEIIRWQTFR-------------RFDLEKKERKAQREK 125
Query: 121 NVDRKQHVSE 130
SE
Sbjct: 126 AAAEATESSE 135
>gi|73748808|ref|YP_308047.1| 30S ribosomal protein S6 [Dehalococcoides sp. CBDB1]
gi|147669569|ref|YP_001214387.1| 30S ribosomal protein S6 [Dehalococcoides sp. BAV1]
gi|289432829|ref|YP_003462702.1| ribosomal protein S6 [Dehalococcoides sp. GT]
gi|91207913|sp|Q3ZY12|RS6_DEHSC RecName: Full=30S ribosomal protein S6
gi|73660524|emb|CAI83131.1| ribosomal protein S6 [Dehalococcoides sp. CBDB1]
gi|146270517|gb|ABQ17509.1| SSU ribosomal protein S6P [Dehalococcoides sp. BAV1]
gi|288946549|gb|ADC74246.1| ribosomal protein S6 [Dehalococcoides sp. GT]
Length = 109
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V +L D ++++ + I E G VN G R +AY I + + YYV
Sbjct: 15 RDYELVVILTTDTPKEKVEAILEGISKTIAEKEGSFTEVNHWGKRKLAYLIGRYVEGYYV 74
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
F+ + + P++I ++ +RI E V+R + + +D
Sbjct: 75 FIKMKAKPSSIRKISTDLRISEQVIRHMAINMDEE 109
>gi|320449315|ref|YP_004201411.1| 30S ribosomal protein S6 [Thermus scotoductus SA-01]
gi|320149484|gb|ADW20862.1| 30S ribosomal protein S6 [Thermus scotoductus SA-01]
Length = 101
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ ++ G V V E GMR +AY I K+ + Y+
Sbjct: 1 MRKYEVNVILNPNLDQSQLALEKEIIGKALEAFGARVEKVEEWGMRRLAYPIAKDTQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + P ++ + R++R+ +NV R + +
Sbjct: 61 LWYQVEMPEDRVNNLARELRLRDNVRRVMVVKTQE 95
>gi|302764328|ref|XP_002965585.1| hypothetical protein SELMODRAFT_7735 [Selaginella moellendorffii]
gi|302769290|ref|XP_002968064.1| hypothetical protein SELMODRAFT_7736 [Selaginella moellendorffii]
gi|300163708|gb|EFJ30318.1| hypothetical protein SELMODRAFT_7736 [Selaginella moellendorffii]
gi|300166399|gb|EFJ33005.1| hypothetical protein SELMODRAFT_7735 [Selaginella moellendorffii]
Length = 98
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE ++L+ + ++K+ + ++ ++E G + N+ GMR +AY+I+K A Y+
Sbjct: 2 KHYEIMYLVH-EAKVGELKEIVDKFTGFVKEKKGRIWRFNDWGMRRLAYKIKKTWHANYI 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
MNI I+E+ + DE ++R + +
Sbjct: 61 LMNIEVGSEYINELNALLEKDERIIRHMIITRKKA 95
>gi|32476151|ref|NP_869145.1| ribosomal protein S6 [Rhodopirellula baltica SH 1]
gi|61216280|sp|Q7UKV1|RS6_RHOBA RecName: Full=30S ribosomal protein S6
gi|32446695|emb|CAD76531.1| probable ribosomal protein S6 [Rhodopirellula baltica SH 1]
gi|327542672|gb|EGF29143.1| Ribosomal protein S6 [Rhodopirellula baltica WH47]
Length = 140
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +F+L + ++ Q + LI ENGGEV++ + +AY I K++K Y
Sbjct: 5 NTYETLFILDSNHYARDPGGVAKQLEELIAENGGEVQVSRMWMEQKLAYPIDKHQKGTYY 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP--RD 119
+ + + ++ R + E V+R LT+ +D P L R + + P +
Sbjct: 65 LIYFSMEGPNLTQLARAFALAEPVIRELTIKLDPRLVEPILANARGE----HFTGPAGAE 120
Query: 120 RNVDRKQHVSEEKPL 134
+ D ++E
Sbjct: 121 GSDDESTESTDEAVA 135
>gi|270288994|ref|ZP_06195296.1| 30S ribosomal protein S6 [Chlamydia muridarum Weiss]
Length = 96
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 13 DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAI 72
+S + + + S I GGEV +++ G + +AY IR R+ YY F+ P AI
Sbjct: 2 TLSEDARRKALEKVTSGITNYGGEVLKIHDQGRKKLAYTIRGAREGYYYFIYFTVAPEAI 61
Query: 73 HEMKRKMRIDENVLRSLTLLVDSHEQ 98
E+ R+ ++E++LR +TL + ++
Sbjct: 62 SELWREYHLNEDLLRFMTLKASAVKE 87
>gi|329769491|ref|ZP_08260901.1| 30S ribosomal protein S6 [Gemella sanguinis M325]
gi|328838706|gb|EGF88304.1| 30S ribosomal protein S6 [Gemella sanguinis M325]
Length = 95
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIEEEAKKAVVERFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIASPPAA-IHEMKRKMRIDENVLRSLTLLVDS 95
+ + S A E R +I ++++R + + ++
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVVRLEK 95
>gi|329768687|ref|ZP_08260171.1| 30S ribosomal protein S6 [Gemella haemolysans M341]
gi|328836401|gb|EGF86066.1| 30S ribosomal protein S6 [Gemella haemolysans M341]
Length = 95
Score = 95.5 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I AYY
Sbjct: 1 MRKYEVMFAVQPRIDEEAKKTVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFSDAYY 59
Query: 61 VFMNIASPPAA-IHEMKRKMRIDENVLRSLTLLVDS 95
+ + S A E R +I ++++R + + ++
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVVRLEK 95
>gi|15643369|ref|NP_228413.1| 30S ribosomal protein S6 [Thermotoga maritima MSB8]
gi|7388218|sp|Q9WZ72|RS6_THEMA RecName: Full=30S ribosomal protein S6
gi|4981123|gb|AAD35688.1|AE001735_1 ribosomal protein S6 [Thermotoga maritima MSB8]
Length = 128
Score = 95.5 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + E++ R+ ++R T R D + + + R++
Sbjct: 67 TVIYFRCDGQNLQELENFYRVTPEIIRWQTFR-------------RFDLEKKERKAQREK 113
Query: 121 NVDRKQHVSE 130
SE
Sbjct: 114 AAAEATESSE 123
>gi|39721604|dbj|BAD04094.1| ribosomal protein S6 [Onion yellows phytoplasma OY-M]
Length = 112
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 53/95 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ S+ +K Q++ + ++ NE+G++ +AY I ++K YY
Sbjct: 18 MKKYEIMYILRPNLDSKDVKKINDTLQNVFLQAPNQILEQNEIGLKDLAYLIDNHKKGYY 77
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + + A+ E R ++I E ++R + +
Sbjct: 78 NWLMVKADNDAVLEFNRIVKITEEIIRFIFIKDKE 112
>gi|288817695|ref|YP_003432042.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|288787094|dbj|BAI68841.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|308751293|gb|ADO44776.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
Length = 110
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE VF+L+ ++ ++++ + + + IQ+ GG++ + G++ +AY I+ + Y
Sbjct: 10 RHYESVFVLKPTLTEEEVQRRLQEIRETIQKKGGQILQEEDWGIKKLAYPIKNFQHGRYF 69
Query: 62 FMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDSHE 97
I S P + + +I ++++R L V E
Sbjct: 70 IFRITSSNPELPNHLDFYYKISDDIIRWLNFQVKVKE 106
>gi|284047345|ref|YP_003397685.1| ribosomal protein S6 [Conexibacter woesei DSM 14684]
gi|283951566|gb|ADB54310.1| ribosomal protein S6 [Conexibacter woesei DSM 14684]
Length = 124
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+Y+ + LLR + ++ + I +NGG++ L E G+R +AY I R A Y
Sbjct: 6 PIYDLMLLLRTSVEDERRAQIRADVEQTIADNGGQIELTQEWGVRNLAYEIDHVRDAEYH 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + P + + ++I + VLR + V +P
Sbjct: 66 LLQFSGPAELVETLSYNLKIADGVLRHRIIKVTPGTPAP 104
>gi|255556472|ref|XP_002519270.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541585|gb|EEF43134.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 324
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 28 SLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
++E G + +N+ GMR +AY+I+K KA+Y+ MN I++ K + DE V+R
Sbjct: 165 GFLREKKGRIWRLNDWGMRRLAYKIQKATKAHYILMNFEIEAKWINDFKSMLDKDERVIR 224
Query: 88 SLTLLVDSHEQS 99
L + D
Sbjct: 225 HLVIKRDEAITE 236
>gi|187251763|ref|YP_001876245.1| 30S ribosomal protein S6 [Elusimicrobium minutum Pei191]
gi|226703465|sp|B2KEG2|RS6_ELUMP RecName: Full=30S ribosomal protein S6
gi|186971923|gb|ACC98908.1| Ribosomal protein S6 [Elusimicrobium minutum Pei191]
Length = 104
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE V +L+ +S ++ + + + I + GGE+ +LG R + I R +Y
Sbjct: 1 MRTYETVTILKPQLSDNEVAEFLNSAKEFITKAGGEIVSEEKLGRRRFTHEIDHVRDGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
V++ + PA + +++E +LRS+ +
Sbjct: 61 VYLKFRALPAFVKSWDEMAKLNEQILRSIVM 91
>gi|222099033|ref|YP_002533601.1| 30S ribosomal protein S6 [Thermotoga neapolitana DSM 4359]
gi|254765461|sp|B9KB39|RS6_THENN RecName: Full=30S ribosomal protein S6
gi|221571423|gb|ACM22235.1| 30S ribosomal protein S6 [Thermotoga neapolitana DSM 4359]
Length = 127
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEEREKLVERVKGIIEERVKGKIDKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
+ + E++ RI ++R T +++ +R ++++ +
Sbjct: 67 TVIYFRCDGQHLQELENFYRITPEIIRWQTFRR--------FDLEKKERKAQSEKKEAE 117
>gi|291530828|emb|CBK96413.1| SSU ribosomal protein S6P [Eubacterium siraeum 70/3]
Length = 97
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V + +K + ++ LI+E+ G + V+E G R +AY I YYV
Sbjct: 7 KYEAVVVFSLKNGEDAVKALVAKFSDLIKEH-GTLVDVDEWGARKLAYEINYETDGYYVV 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLT 90
+ S P E +R + I + V+RSL
Sbjct: 66 YSFDSKPDFPMEFERIINITDGVIRSLV 93
>gi|282855811|ref|ZP_06265113.1| ribosomal protein S6 [Pyramidobacter piscolens W5455]
gi|282586325|gb|EFB91591.1| ribosomal protein S6 [Pyramidobacter piscolens W5455]
Length = 95
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + ++ + ++ + + L+ + GGEV + G R +AY I+K + YV
Sbjct: 3 RSYEMMVIIDPTVEDHSVE--VKAIEELVVKLGGEVAKTDVWGKRRLAYEIKKLTEGIYV 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ P + E+ R + + V+R L + D
Sbjct: 61 VIEFKIEPDQLKELGRVLSLRPLVVRHLNVAAD 93
>gi|325142506|gb|EGC64907.1| ribosomal protein S6 [Neisseria meningitidis 961-5945]
Length = 80
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
G R +AY I K KA+YV MNI + P + E++ R ++ VLR LT+ +
Sbjct: 1 GRRQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM 60
Query: 104 I 104
+
Sbjct: 61 L 61
>gi|157363693|ref|YP_001470460.1| 30S ribosomal protein S6 [Thermotoga lettingae TMO]
gi|157314297|gb|ABV33396.1| ribosomal protein S6 [Thermotoga lettingae TMO]
Length = 114
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ + + + + +I E G ++ VN G+R +AY I + Y
Sbjct: 3 RIYESMFIIDPRLNDEERETLVERIKEIISERVKGTIQTVNRWGLRKLAYPISHLTEGDY 62
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ +PP +++++ R+ +LR T + E+
Sbjct: 63 TVLLFKAPPTDLNKLEEFFRVTPQILRWQTFRREDLEKK 101
>gi|11465825|ref|NP_053969.1| ribosomal protein S6 [Porphyra purpurea]
gi|1710707|sp|P51359|RR6_PORPU RecName: Full=30S ribosomal protein S6, chloroplastic
gi|1276825|gb|AAC08245.1| 30S ribosomal protein S6 [Porphyra purpurea]
Length = 112
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE V+L++ D++ + I +Y+S++ G + ++ G R ++Y I+ R YV
Sbjct: 13 NWYETVYLIKSDLNEDRTLCIINEYKSMLTNGGAKNIILQHRGRRHLSYSIKDYRDGIYV 72
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+N + ++ +R DEN++R LT +
Sbjct: 73 QVNYEGNGKLVQSFEKSLRFDENIIRYLTNKQNK 106
>gi|218296079|ref|ZP_03496848.1| ribosomal protein S6 [Thermus aquaticus Y51MC23]
gi|218243456|gb|EED09985.1| ribosomal protein S6 [Thermus aquaticus Y51MC23]
Length = 101
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ ++ +G V V E G+R +AY I K+ + Y+
Sbjct: 1 MRKYEVNVILNPNLDQTQLALEKEIIGKALEAHGARVEKVEEWGVRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+F + P ++ + R++RI +NV R + +
Sbjct: 61 LFYQVEMPEDRVNALARELRIRDNVRRVMVVK 92
>gi|330813906|ref|YP_004358145.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
gi|327487001|gb|AEA81406.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
Length = 107
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 51/101 (50%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YEH ++ +++ + + + ++++N ++ G+R++AY I+KN + Y
Sbjct: 1 MNYYEHTYITVPELNEESSNSIKEKIEEILKKNDSKIVKEENWGVRSLAYSIKKNYRGKY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
+ I I E+++ R DE +++ L++ + + +
Sbjct: 61 SNLYIEGNSKVIKELEKFERYDERIIKFLSMKIKKIPEEES 101
>gi|317496135|ref|ZP_07954495.1| ribosomal protein S6 [Gemella moribillum M424]
gi|316913710|gb|EFV35196.1| ribosomal protein S6 [Gemella moribillum M424]
Length = 95
Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F ++ I + K + ++ +++ E G E V +LG + +AY I A+Y
Sbjct: 1 MRKYEVIFAVQPRIDEEAKKAVVDRFVNILSE-GAEAVEVKDLGKKRLAYEIEDFTDAFY 59
Query: 61 VFMNIASPPAA-IHEMKRKMRIDENVLRSLTLLVDS 95
+ + S A E R +I ++++R + + ++
Sbjct: 60 YVVELTSETDASTKEFDRLAKISDDIIRHMVVRLEK 95
>gi|115378657|ref|ZP_01465807.1| ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|310823078|ref|YP_003955436.1| 30S ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|115364323|gb|EAU63408.1| ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
gi|309396150|gb|ADO73609.1| 30S ribosomal protein S6 [Stigmatella aurantiaca DW4/3-1]
Length = 155
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 57/145 (39%), Gaps = 14/145 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +FL++ D++ + + + ++ GG++ G + Y I K +A YV
Sbjct: 11 REYETIFLVKPDLTDDNVDRLKERVRGIVNREGGKLIRFTVWGKKKTLYPIAKQPRAIYV 70
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPTLTIQRHD------------ 108
+ + E++R +R + V R L++ + D + ++
Sbjct: 71 HTHFLGDSKLVAEVERNLRNIDEVTRYLSVKLADEVDPESRPVLEDVKLAGDVEETRPGV 130
Query: 109 -RDDRNDRFPRDRNVDRKQHVSEEK 132
+ P + D ++ SEE
Sbjct: 131 PERESFRAEPAEEASDTEEEASEEA 155
>gi|213582066|ref|ZP_03363892.1| 30S ribosomal subunit protein S6 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 85
Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 48 IAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQ-R 106
+AY I K KA+YV MN+ +P I E++ R ++ V+RS+ + + ++ +
Sbjct: 1 MAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAK 60
Query: 107 HDRDDRNDRFPRDRNVDRKQHVSEE 131
+R +R D F + D + SEE
Sbjct: 61 DERRERRDDFANETADDAEAGDSEE 85
>gi|148269460|ref|YP_001243920.1| 30S ribosomal protein S6 [Thermotoga petrophila RKU-1]
gi|281411822|ref|YP_003345901.1| ribosomal protein S6 [Thermotoga naphthophila RKU-10]
gi|166227399|sp|A5IJH1|RS6_THEP1 RecName: Full=30S ribosomal protein S6
gi|147735004|gb|ABQ46344.1| SSU ribosomal protein S6P [Thermotoga petrophila RKU-1]
gi|281372925|gb|ADA66487.1| ribosomal protein S6 [Thermotoga naphthophila RKU-10]
Length = 128
Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYY 60
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K + Y
Sbjct: 7 RIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIEKVERMGMRKFAYEIKKFSEGDY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + E++ R+ ++R T +++ +R + ++ +
Sbjct: 67 TVIYFRCDGQNLQELENFYRVTPEIIRWQTFRR--------FDLEKKERKAQREKAAAE- 117
Query: 121 NVDRKQHVSE 130
V+ + SE
Sbjct: 118 AVETGEGGSE 127
>gi|251772230|gb|EES52800.1| ribosomal protein S6 [Leptospirillum ferrodiazotrophum]
Length = 129
Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V LL+ +S ++ + TI +Y+ ++++ GG + LG + +AY +RK +KA Y
Sbjct: 1 MYFYECVLLLKPTLSDEEAQATISRYEKIVEDKGGRLHATQRLGKKRLAYELRKEKKADY 60
Query: 61 VFMN--IASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + +P I E++R R+DE +++S+ L
Sbjct: 61 VILYAEFKNPADQI-ELERVARLDERIIKSMNLRRK 95
>gi|206602645|gb|EDZ39126.1| Ribosomal protein S6 [Leptospirillum sp. Group II '5-way CG']
Length = 122
Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V L++ ++S ++I +G++Q+L+ G V V ++G R ++Y ++K R+A Y
Sbjct: 1 MAFYECVLLIKSNLSDEEIASVLGKFQNLVVSREGTVHHVQKMGKRRLSYELKKERRAEY 60
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V + I E R+ R+DE +++++ + + P+ ++ +
Sbjct: 61 VVFFVEFQKSEGIAEFDRQARLDERIIKTMVVRKNKLV-LPSSEGTGEEKSEHA 113
>gi|124514470|gb|EAY55983.1| ribosomal protein S6 [Leptospirillum rubarum]
Length = 122
Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V L++ ++S ++I + ++Q+L+ G V V ++G R ++Y ++K R+A Y
Sbjct: 1 MAFYECVLLIKSNLSDEEIASVLAKFQNLVVSREGTVHHVQKMGKRRLSYELKKERRAEY 60
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRN 113
V I I E R+ R+DE +++++ + + P+ ++ +
Sbjct: 61 VVFFIEFQKSEDIAEFDRQARLDERIIKTMVVRKNKLV-LPSSEGTGEEKSEHA 113
>gi|315640350|ref|ZP_07895466.1| 30S ribosomal protein S6 [Enterococcus italicus DSM 15952]
gi|315483886|gb|EFU74366.1| 30S ribosomal protein S6 [Enterococcus italicus DSM 15952]
Length = 99
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE ++++R +I + I ++ S++++NG EV + R +AY + R+ Y
Sbjct: 5 NYEILYIIRPNIDEEAKSALIERFDSILKDNGAEVIESKDWEKRRLAYEMNGFREGIYHI 64
Query: 63 MN--IASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ S +A+ E R +I+++++R + + +
Sbjct: 65 VKVSSPSSASAVSEFDRLAKINDDIVRHMIVKEEK 99
>gi|309792551|ref|ZP_07687013.1| ribosomal protein S6 [Oscillochloris trichoides DG6]
gi|308225365|gb|EFO79131.1| ribosomal protein S6 [Oscillochloris trichoides DG6]
Length = 133
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 2 KLYEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIR---- 53
+ YE + ++ ++++ + T+ + I GGEV VN G R +AY IR
Sbjct: 6 RNYELMIIISPLHANEEGVTATVERISQSITNAGGEVAGVNQSPPWGRRKLAYPIREYAS 65
Query: 54 ------KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ YY + A + E++R +++ ++V+R L LV+
Sbjct: 66 GEASRRNFTEGYYALFTFSLAAAKVAEVERTLKLTDSVMRHLITLVE 112
>gi|303242468|ref|ZP_07328949.1| ribosomal protein S6 [Acetivibrio cellulolyticus CD2]
gi|302589992|gb|EFL59759.1| ribosomal protein S6 [Acetivibrio cellulolyticus CD2]
Length = 95
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F++ +++ K I + + L++ + ++ ++E G R +AY I + YYV
Sbjct: 4 KYETIFIVSPEVNEDDTKAIIEKMKGLVETS-AQLESIDEWGKRKLAYPINDFNEGYYVL 62
Query: 63 MNIASPPAAIHEMKRKMR 80
+N +S HE++R +
Sbjct: 63 INFSSETNFPHELERVYK 80
>gi|156741508|ref|YP_001431637.1| 30S ribosomal protein S6 [Roseiflexus castenholzii DSM 13941]
gi|156232836|gb|ABU57619.1| ribosomal protein S6 [Roseiflexus castenholzii DSM 13941]
Length = 158
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 2 KLYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNE---LGMRTIAYRIRK--- 54
+ YE +F++ I ++I + I + I GG + +N G R AY IR
Sbjct: 6 RDYELLFIIPPIRIGDEEIHNAIERVSQAITNLGGVMTAINHAPPWGRRKFAYPIRAYVE 65
Query: 55 -------NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ YYV MN + E++R ++++++VLR L LV+
Sbjct: 66 GEASRRVFTEGYYVLMNFQMATDRVAELERLLKLNDSVLRYLLTLVE 112
>gi|256370725|ref|YP_003108550.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri SMDSEM]
gi|256009517|gb|ACU52877.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri SMDSEM]
Length = 122
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V ++ +S +QIK T Y + + + ++ G++ +AY I+ Y
Sbjct: 2 KYETVLVITPVLSEEQIKLTTSNYINFLIDKKAKLIFQENWGLKKLAYPIQNKTSGCYHI 61
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + P I +K K+ DE ++R L + +
Sbjct: 62 IYFLAKPKLILNLKWKLLRDEKIMRFLIIKI 92
>gi|94502359|ref|ZP_01308825.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833771|ref|YP_001597967.1| 30S ribosomal subunit protein S6 [Candidatus Sulcia muelleri
GWSS]
gi|94451084|gb|EAT14043.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206261|gb|ABS30571.1| 30S ribosomal subunit protein S6 [Candidatus Sulcia muelleri
GWSS]
Length = 108
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V ++ +SS++IK T +Y + + N + G++ +AY I+K + +Y
Sbjct: 2 KYETVLIITPVLSSEKIKLTTLEYINYLIINKANLMFEEHWGVKKLAYPIKKKKYGFYHI 61
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ P I+ + K+ DE ++R LT+ +
Sbjct: 62 FYYSANPKLIYNLDFKLNRDEKIIRFLTVKI 92
>gi|222524396|ref|YP_002568867.1| 30S ribosomal protein S6 [Chloroflexus sp. Y-400-fl]
gi|222448275|gb|ACM52541.1| ribosomal protein S6 [Chloroflexus sp. Y-400-fl]
Length = 135
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 2 KLYEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIR---- 53
+ YE V ++ ++++ I I + + +++ GG++ V+ G R +AY IR
Sbjct: 6 REYELVVIINPLFANEEGITANIDRIRQTVEQLGGKINTVSQSSPWGRRKLAYPIREYVT 65
Query: 54 ------KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
K + YYVF + A + E+ R +R+++N+LR L +LV+ T
Sbjct: 66 GEASRRKFTEGYYVFFTLELSAAKVAELDRAIRLNDNILRHLLVLVEEKSVQVTPVEPAE 125
Query: 108 DRDDRNDRF 116
+
Sbjct: 126 SETEEAPSE 134
>gi|293977884|ref|YP_003543314.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri DMIN]
gi|292667815|gb|ADE35450.1| ribosomal protein S6 [Candidatus Sulcia muelleri DMIN]
Length = 108
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE V ++ +SS++IK T +Y + + N + G++ +AY I+K + +Y
Sbjct: 2 KYETVLIITPVLSSEKIKLTTLEYINYLIINKANLMFEEHWGVKKLAYPIKKKKYGFYHI 61
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ P I+ + K+ DE ++R LT+ +
Sbjct: 62 FYYSANPKLIYNLDLKLNRDEKIIRFLTVKI 92
>gi|146319488|ref|YP_001199200.1| ribosomal protein S6 [Streptococcus suis 05ZYH33]
gi|145690294|gb|ABP90800.1| Ribosomal protein S6 [Streptococcus suis 05ZYH33]
Length = 83
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPP-AAI 72
+ + + ++ S++ +NG + R +AY I+ R+ Y +N+ + A+
Sbjct: 1 MEEEAKNALVARFDSILTDNGATIVESKAWEKRRLAYEIKDFREGLYHIVNVEANNDEAL 60
Query: 73 HEMKRKMRIDENVLRSLTLLVDS 95
E R +I+ ++LR + + +D+
Sbjct: 61 KEFDRLSKINGDILRHMIVKLDA 83
>gi|258645633|ref|ZP_05733102.1| ribosomal protein S6 [Dialister invisus DSM 15470]
gi|260402994|gb|EEW96541.1| ribosomal protein S6 [Dialister invisus DSM 15470]
Length = 94
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 1 MKLYEHVFLLRQDISSQQI-KDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
MK YE +F++ DI+++++ + + Q I GG V V+E G R +AY ++ + Y
Sbjct: 1 MKKYEVMFIV--DIANEEVIQAAVKLVQDTIVRIGGTVTKVDEWGKRHLAYEVKHQNEGY 58
Query: 60 YVFMNIASPPAAIHEMKRKMR 80
YV ++ + P+ I E+ R ++
Sbjct: 59 YVVIDFEADPSQIAELDRIIK 79
>gi|163846600|ref|YP_001634644.1| 30S ribosomal protein S6 [Chloroflexus aurantiacus J-10-fl]
gi|163667889|gb|ABY34255.1| ribosomal protein S6 [Chloroflexus aurantiacus J-10-fl]
Length = 145
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 2 KLYEHVFLLRQDISSQQ-IKDTIGQYQSLIQENGGEVRLVN---ELGMRTIAYRIR---- 53
+ YE V ++ ++++ I I + + +++ GG++ V+ G R +AY IR
Sbjct: 16 REYELVVIINPLFANEEGITANIDRIRQTVEQLGGKINTVSQSSPWGRRKLAYPIREYVT 75
Query: 54 ------KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
K + YYVF + A + E+ R +R+++N+LR L +LV+ T
Sbjct: 76 GEASRRKFTEGYYVFFTLELSAAKVAELDRAIRLNDNILRHLLVLVEEKSVQVTPVEPAE 135
Query: 108 DRDDRNDRF 116
+
Sbjct: 136 SETEEAPSE 144
>gi|262277394|ref|ZP_06055187.1| ribosomal protein S6 [alpha proteobacterium HIMB114]
gi|262224497|gb|EEY74956.1| ribosomal protein S6 [alpha proteobacterium HIMB114]
Length = 108
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 57/107 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M +YEH ++ + + + +++ + + ++ ++ G++ + + G+R +AY I+KN K +Y
Sbjct: 1 MNIYEHTYIAAPEANKKDLENIEKRIEEILSKSSGKICKIEDWGLRNLAYPIKKNSKGHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ + A+ ++ + ++ V++ L++ + + + + +
Sbjct: 61 RNLYLEGNNKAVRAIEEFEKFNDKVIKYLSMKIKNLPKEESELAKEK 107
>gi|189485363|ref|YP_001956304.1| 30S ribosomal protein S6 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287322|dbj|BAG13843.1| 30S ribosomal protein S6 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 120
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +F++ ++ +++I++ + +I+++ G ++ + G + AY I K R+ Y
Sbjct: 1 MN-YESIFIISPEVPAEKIEELTTKAVKIIEDSKGTFKMSQQFGKKRFAYPINKLREGSY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSL 89
V+ + ++ ++ + ++ ++R L
Sbjct: 60 VYTEFSGNGETVNALESFFKFNDLIVRFL 88
>gi|254796462|ref|YP_003081298.1| ribosomal protein S6 [Neorickettsia risticii str. Illinois]
gi|254589705|gb|ACT69067.1| ribosomal protein S6 [Neorickettsia risticii str. Illinois]
Length = 114
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL +S + + + + + EN +V G +AYRI+ + KA Y
Sbjct: 6 YECVFLASSSLSEGGVSNLMDNFNAAFAENNIKVLRQENWGSLALAYRIKNHTKANYFMF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
+++ P+A+ + + K++ ++ VLR L
Sbjct: 66 VVSAEPSALQKFEAKLKYNDLVLRYL 91
>gi|51209874|ref|YP_063538.1| ribosomal protein S6 [Gracilaria tenuistipitata var. liui]
gi|68052942|sp|Q6B922|RR6_GRATL RecName: Full=30S ribosomal protein S6, chloroplastic
gi|50657628|gb|AAT79613.1| 30S ribosomal protein S6 [Gracilaria tenuistipitata var. liui]
Length = 103
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 50/91 (54%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE +++L+ +I+ + I +Y++LI++ GG +V G R + Y I+ YV
Sbjct: 4 NKYETIYILQPNITESENLILINEYKALIKKYGGNNIVVQHKGRRHLNYNIKSYYDGIYV 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+N + + +++ MR+ ++V+R +T+
Sbjct: 64 QINYTASSNLVRILEKAMRLSQHVIRYMTIK 94
>gi|260655515|ref|ZP_05861003.1| ribosomal protein S6 [Jonquetella anthropi E3_33 E1]
gi|260629963|gb|EEX48157.1| ribosomal protein S6 [Jonquetella anthropi E3_33 E1]
Length = 107
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LYE + ++ + ++ I + L+ GEV + G R +AY I+ + YV
Sbjct: 15 RLYEMMVIINPSV--EEHSAEIKGIEELVARLSGEVTKSDLWGKRRLAYEIKGLNEGIYV 72
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P+A+ E+ R M++ NV+R + + D
Sbjct: 73 VFELKLDPSALSELDRLMKLRPNVVRHMVTVRDE 106
>gi|291545081|emb|CBL18190.1| SSU ribosomal protein S6P [Ruminococcus sp. 18P13]
Length = 97
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNE-LGMRTIAYRIRKNRKAYY 60
YE + + +K+ I ++++ I+EN + V+E G R +AY I YY
Sbjct: 6 AKYEAMVVFSLAKGEDAVKELIEKFKAQIEEN-ATLESVDESWGKRKLAYPINDELDGYY 64
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V S PA E RK+ I + VLRSL
Sbjct: 65 VIYTFESTPAYPAEFTRKVNITDGVLRSLV 94
>gi|85057283|ref|YP_456199.1| 30S ribosomal protein S6 [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123518528|sp|Q2NKC3|RS6_AYWBP RecName: Full=30S ribosomal protein S6
gi|84789388|gb|ABC65120.1| SSU ribosomal protein S6P [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 95
Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 51/95 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE +++LR ++ ++ +K Q++ + ++ E+G++ + Y I ++K YY
Sbjct: 1 MKKYEIMYILRPNLDNKYVKKINDTLQNVFLQAPNQILEQKEIGLKDLTYFIDNHKKGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
++ + + A+ E R ++I E ++R + +
Sbjct: 61 NWLMVKADNDAVLEFNRIVKITEEIIRFIVIKDKE 95
>gi|325282626|ref|YP_004255167.1| 30S ribosomal protein S6 [Deinococcus proteolyticus MRP]
gi|324314435|gb|ADY25550.1| 30S ribosomal protein S6 [Deinococcus proteolyticus MRP]
Length = 103
Score = 90.8 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L +IS++Q++ Q + GGE+ ++ELG R +AY I K R+ YY
Sbjct: 1 MAQYDLNLILNPNISAEQVETEKDFIQRAVTNAGGEITNLDELGNRRLAYAINKTREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ I ++ +R+ +NV R L +
Sbjct: 61 LMYTITMAGNPEKDIASSLRLRDNVYRVLVVK 92
>gi|313664919|ref|YP_004046790.1| ribosomal protein S6 [Mycoplasma leachii PG50]
gi|312949260|gb|ADR23856.1| ribosomal protein S6 [Mycoplasma leachii PG50]
Length = 137
Score = 90.8 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++L QD+ K+ + + ++ E GG++ N+LG+ Y I +K +Y
Sbjct: 3 KKYEVMYILDQDLKD--TKELVAKLDGILSE-GGQILESNDLGLLDFTYEINHKKKGFYH 59
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---------QSPTLTIQRHDRDDR 112
+ + + AI E +R +ID+NV+R+L L ++ + ++ + R+ +
Sbjct: 60 IVIVQATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKFEEEQREKK 119
Query: 113 NDRFPRDRNVDRKQHVS 129
N R P + + S
Sbjct: 120 NFRKPFIKREEAATKES 136
>gi|325971034|ref|YP_004247225.1| 30S ribosomal protein S6 [Spirochaeta sp. Buddy]
gi|324026272|gb|ADY13031.1| 30S ribosomal protein S6 [Spirochaeta sp. Buddy]
Length = 93
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + + S G E+ +++G++ +AY I+K K +Y
Sbjct: 1 MRNYEFTVIFNAN--EENTTAGLEYVTSTFATAGVEITKQDDMGVKYLAYDIKKQEKGHY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V+ + + P+ I E +R ++ N+L+ L + +
Sbjct: 59 VYFELKADPSTILEFERGFLLNANILKYLFVNTEK 93
>gi|51246447|ref|YP_066331.1| 30S ribosomal protein S6 [Desulfotalea psychrophila LSv54]
gi|182705274|sp|Q6AK02|RS6_DESPS RecName: Full=30S ribosomal protein S6
gi|50877484|emb|CAG37324.2| similar to 30S ribosomal protein S6 [Desulfotalea psychrophila
LSv54]
Length = 159
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELG-MRTIAYRIRKNRKAY 59
M+ E +++LR +S + I I +I ++ G + G +++ RK+ + Y
Sbjct: 1 MRRDETIYILRPTMSEEHINTVIENTNKIILDDAGTIIFYEPSGAUKSLLTUSRKSSQGY 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
YV+ + A PAA+ EM+R+ RI++ VL+ +T+ + + + D
Sbjct: 61 YVYCDYAGTPAAVSEMERRFRIEDAVLKYMTVKLSEDISAEEIQQAIGD 109
>gi|195952829|ref|YP_002121119.1| ribosomal protein S6 [Hydrogenobaculum sp. Y04AAS1]
gi|195932441|gb|ACG57141.1| ribosomal protein S6 [Hydrogenobaculum sp. Y04AAS1]
Length = 112
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
++YE V + + ++ + + + + I + GG + + G + +AY+I Y
Sbjct: 10 RMYESVVVFKPTLTEDEYNTKLNEVKDFIAKKGGNIVHEEDWGTKNLAYKISGFGHGRYH 69
Query: 62 FMN-IASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
F ++ +++ +I+E+++R L +L +
Sbjct: 70 FFKIFSTNSQLPNDLDFYYKINEDIIRWLNILSKETSEE 108
>gi|328858003|gb|EGG07117.1| hypothetical protein MELLADRAFT_106173 [Melampsora larici-populina
98AG31]
Length = 151
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR---- 56
M LY L + ++ + SL+ +NGG VR ++ LG R RI+ N
Sbjct: 1 MPLYSLTCLALHYPTYAPLRALVHTSTSLVHKNGGLVRKIDYLGKRNTTQRIKANSIQGG 60
Query: 57 --KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+A Y M + P + E+ ++R+D VLR TLLV
Sbjct: 61 VDEADYWTMMFDANPPTVKELTERLRVDPRVLRHTTLLVGKKLSE 105
>gi|313888652|ref|ZP_07822317.1| ribosomal protein S6 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845381|gb|EFR32777.1| ribosomal protein S6 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 94
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V + ++ ++ + + + +I+++ G++ ++E GM+ +AY I +AYY
Sbjct: 1 MNKYEAVIMFYPEVEEEKRNASFDRLKKVIEKD-GKINNIDEWGMKKLAYAIDYKNEAYY 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+F + I E+ R +I + V+R + + V+
Sbjct: 60 IFYEFETKAEDIVEINRVAKIMDPVMRQMIIKVE 93
>gi|239616722|ref|YP_002940044.1| ribosomal protein S6 [Kosmotoga olearia TBF 19.5.1]
gi|239505553|gb|ACR79040.1| ribosomal protein S6 [Kosmotoga olearia TBF 19.5.1]
Length = 151
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRK-NRKAY 59
++YE +F++ ++ + + + + I+E G + + GMR +AYR+RK +
Sbjct: 5 RIYETMFIVSPELPDEAREAIAEKVKRYIEERVEGTIEQFDRWGMRKLAYRVRKGFTEGD 64
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + + P ++ ++R I + R T +
Sbjct: 65 YTVVLFRADPEKVNSLERLYNITPEIFRWQTFRRE 99
>gi|83319327|ref|YP_424022.1| 30S ribosomal protein S6 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|91207919|sp|Q2ST91|RS6_MYCCT RecName: Full=30S ribosomal protein S6
gi|83283213|gb|ABC01145.1| 30S ribosomal protein S6 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 137
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++L QD+ K+ + + ++ E GG++ N+LG+ Y I +K +Y
Sbjct: 3 KKYEVMYILDQDLKD--TKELVAKLDGILSE-GGQILESNDLGLLDFTYEINHKKKGFYH 59
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---------QSPTLTIQRHDRDDR 112
+ + + AI E +R +ID+NV+R+L L + + ++ + R+ +
Sbjct: 60 IVIVQATTQAIKEFERIAKIDKNVVRTLVLNTQNIQNYEQSVVLSKTDMTKFEEEQREKK 119
Query: 113 NDRFPRDRNVDRKQ 126
N R P + +
Sbjct: 120 NFRKPFIKREEAAT 133
>gi|328949626|ref|YP_004366961.1| 30S ribosomal protein S6 [Marinithermus hydrothermalis DSM 14884]
gi|328449950|gb|AEB10851.1| 30S ribosomal protein S6 [Marinithermus hydrothermalis DSM 14884]
Length = 102
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ Q++ Q ++ G EV+ V E G R +AY I+K+ + YY
Sbjct: 1 MPQYDVNIILNPNLEPNQLQFEKDMIQQALERFGAEVKGVEEWGNRRLAYPIQKDTQGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+F + PA ++ ++R+ +NV R L +
Sbjct: 61 LFYTVELEPAKAKPLENELRVRDNVRRVLIVR 92
>gi|307128655|ref|YP_003880685.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri CARI]
gi|306483117|gb|ADM89987.1| 30S ribosomal protein S6 [Candidatus Sulcia muelleri CARI]
Length = 113
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE +F+L +S +Q+K + +Y + + G++ +AY I+ YY
Sbjct: 2 KYETLFILNPVLSEEQMKYCVSEYIDFFFKKKAKFLFQEHWGLKKLAYSIQNKINGYYHV 61
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
I +++ K+R DE ++R ++ +D
Sbjct: 62 FYYKVNSQFISKLELKIRRDERIIRFFSVKIDK 94
>gi|307108495|gb|EFN56735.1| hypothetical protein CHLNCDRAFT_144161 [Chlorella variabilis]
Length = 143
Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LYE L + + + I + S + E GG V + G R +AY IR +++
Sbjct: 1 MPLYELFALAKPQLGKKAIASIMKAVASKVMEQGGVVTDIRSYGERKLAYDIRQPGVRHK 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL 102
+A +N A+ PA + E+ +R+DE +LR L L + + PT
Sbjct: 61 EAAMWQINFAANPATLPELDHTLRVDERMLRWLVLKRQPYRRLPTP 106
>gi|268609245|ref|ZP_06142972.1| ribosomal protein S6 [Ruminococcus flavefaciens FD-1]
Length = 98
Score = 88.5 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + + + +K I +++ I+ + V + + G R +AY I + YYV
Sbjct: 6 AKYEVMVVFSLKNGEEPMKALIQKFKERIERHAEAVEVNEDWGKRKLAYPIEDETEGYYV 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
S P ++ R++ + + +LRSL +V+
Sbjct: 66 IYTFTSQPDYPADLSRRLNLSDGILRSLVTVVE 98
>gi|153002999|ref|YP_001377324.1| ribosomal protein S6 [Anaeromyxobacter sp. Fw109-5]
gi|152026572|gb|ABS24340.1| ribosomal protein S6 [Anaeromyxobacter sp. Fw109-5]
Length = 150
Score = 88.5 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++LL+ + Q+++ + + ++ GG+V G R A+ + KN KA Y+
Sbjct: 9 REYETIYLLKAETPDDQVEEIKERLRGVVTREGGKVIRFTNQGKRKTAFPVGKNPKALYM 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV------DSHEQSPTLTIQRHDRDDRNDR 115
P + E++R +++ + V + ++ + D+ + P + IQ + + +
Sbjct: 69 HCLYIGQPGLVAELERNLKMIDQVSKFQSVRLAEGVDFDARQVEPDVKIQAVEDEPK--- 125
Query: 116 FPRDRNVDRKQHV 128
PR+ +
Sbjct: 126 -PREERGEFAPGD 137
>gi|226226612|ref|YP_002760718.1| 30S ribosomal protein S6 [Gemmatimonas aurantiaca T-27]
gi|226089803|dbj|BAH38248.1| 30S ribosomal protein S6 [Gemmatimonas aurantiaca T-27]
Length = 130
Score = 88.1 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE V++ + I + + + QSL+ N E + G R +AY+I ++ YYV
Sbjct: 12 RRYEAVYIFDSALEDTVIVEKLEKLQSLL--NLAEPAEIEHWGRRQLAYKIGRHENGYYV 69
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + P + E +R +++DE V+R L L + +P L+
Sbjct: 70 ISHFTTVPTTLPEFERALKLDETVVRYLVTLHEHELGAPKLS 111
>gi|217076744|ref|YP_002334460.1| ribosomal protein S6 [Thermosipho africanus TCF52B]
gi|226695293|sp|B7IGA5|RS6_THEAB RecName: Full=30S ribosomal protein S6
gi|217036597|gb|ACJ75119.1| ribosomal protein S6 [Thermosipho africanus TCF52B]
Length = 119
Score = 88.1 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
M++YE +F+++ DI+ ++ + ++E ++ V+ G+R AY ++K +A
Sbjct: 1 MRIYETMFIIKPDIAEEEREKIANGVVEFLKEKLNAQIDNVDRWGIRKTAYPLKKYNEAD 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
Y + + ++E++ ++ LR T E+ T ++ + + ++
Sbjct: 61 YTVVYFRATGENLNELEMYFKVRPEFLRWQTFRRIDLEKKERKTAKKVETVENTEKVEE 119
>gi|237844073|ref|XP_002371334.1| ribosomal protein S6, putative [Toxoplasma gondii ME49]
gi|211968998|gb|EEB04194.1| ribosomal protein S6, putative [Toxoplasma gondii ME49]
gi|221506381|gb|EEE32016.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 406
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LY V L R ++S +IK+ + Y +Q+ V G R +AYR++K A+ V
Sbjct: 282 RLYRVVALFRPELSVPKIKEAVRPYVDQLQQWRCRSLRVTYRGYRRLAYRVKKKDSAHVV 341
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
M P+A+H + K+ +D+N++R + L
Sbjct: 342 EMTFDLLPSAVHYLHVKLNLDDNIIRFMILK 372
>gi|88608090|ref|YP_505963.1| ribosomal protein S6 [Neorickettsia sennetsu str. Miyayama]
gi|88600259|gb|ABD45727.1| ribosomal protein S6 [Neorickettsia sennetsu str. Miyayama]
Length = 114
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE VFL +S + + + + + EN +V G +AYR++ + KA Y
Sbjct: 6 YECVFLASSSLSEGGVSNLMDNFNAAFAENSIKVLRQENWGSLALAYRVKNHTKANYFMF 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSL 89
I++ P A+ + + K++ ++ VLR L
Sbjct: 66 VISAEPLALQKFEAKLKYNDLVLRYL 91
>gi|46200042|ref|YP_005709.1| 30S ribosomal protein S6 [Thermus thermophilus HB27]
gi|55980214|ref|YP_143511.1| 30S ribosomal protein S6 [Thermus thermophilus HB8]
gi|266977|sp|P23370|RS6_THETH RecName: Full=30S ribosomal protein S6; AltName: Full=TS9
gi|50401230|sp|P62666|RS6_THET2 RecName: Full=30S ribosomal protein S6
gi|68713997|sp|Q5SLP8|RS6_THET8 RecName: Full=30S ribosomal protein S6; AltName: Full=TS9
gi|628483|pir||S43389 ribosomal protein S6 - Thermus sp
gi|10120569|pdb|1FKA|F Chain F, Structure Of Functionally Activated Small Ribosomal
Subunit At 3.3 A Resolution
gi|10835590|pdb|1FJG|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096399|pdb|1HR0|F Chain F, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399797|pdb|1HNW|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399819|pdb|1HNX|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399841|pdb|1HNZ|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278015|pdb|1GIX|I Chain I, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278061|pdb|1IBK|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278082|pdb|1IBL|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278106|pdb|1IBM|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|14278535|pdb|1I94|F Chain F, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278556|pdb|1I95|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278577|pdb|1I96|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278599|pdb|1I97|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|15826125|pdb|1JGO|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgo, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826150|pdb|1JGP|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgp, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826175|pdb|1JGQ|I Chain I, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgq, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|20663891|pdb|1J5E|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065881|pdb|1N32|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065908|pdb|1N33|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065935|pdb|1N34|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065961|pdb|1N36|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position
gi|28373704|pdb|1ML5|I Chain I, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|34811534|pdb|1PNS|F Chain F, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811590|pdb|1PNX|F Chain F, Crystal Structure Of The Wild Type Ribosome From E.
Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx,
Contains Only Molecules Of The 30s Ribosomal Subunit.
The 50s Subunit Is In The Pdb File 1pny.
gi|56966328|pdb|1VOQ|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966381|pdb|1VOS|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966434|pdb|1VOV|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966487|pdb|1VOX|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966540|pdb|1VOZ|F Chain F, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|58177405|pdb|1XMO|F Chain F, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177428|pdb|1XMQ|F Chain F, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To
The Decoding Center
gi|58177469|pdb|1XNQ|F Chain F, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177492|pdb|1XNR|F Chain F, Crystal Structure Of An Inosine-Cytosine Wobble Base
Pair In The Context Of The Decoding Center
gi|66361059|pdb|1YL4|I Chain I, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192241|pdb|2B64|F Chain F, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf1 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Subunit, Trnas,
Mrna And Release Factor Rf1 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf1 And Is Described In Remark 400.
gi|88192304|pdb|2B9M|F Chain F, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf2 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Ribosomal Subunit,
Trnas, Mrna And Release Factor Rf2 From A Crystal
Structure Of The Whole Ribosomal Complex". The Entire
Crystal Structure Contains One 70s Ribosome, Trnas,
Mrna And Release Factor Rf2 And Is Described In Remark
400.
gi|88192360|pdb|2B9O|F Chain F, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s
Subunit, Trnas And Mrna From A Crystal Structure Of The
Whole Ribosomal Complex With A Stop Codon In The A-Site
And Is Described In Remark 400.
gi|110591328|pdb|2F4V|F Chain F, 30s Ribosome + Designer Antibiotic
gi|116667659|pdb|2HHH|F Chain F, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668202|pdb|2J00|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of
4). This File Contains The 30s Subunit, Mrna, A-, P-
And E-Site Trnas And Paromomycin For Molecule I.
gi|116668263|pdb|2J02|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389717|pdb|2HGI|I Chain I, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
P Codons. This Entry 2hgi Contains 30s Ribosomal
Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb
Entry 2hgj.
gi|119389774|pdb|2HGP|I Chain I, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome With Translocated And Rotated Shine-Dalgarno
Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
2hgq.
gi|119389830|pdb|2HGR|I Chain I, 70s T.Th. Ribosome Functional Complex With Mrna And E-
And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149241280|pdb|2E5L|F Chain F, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna
Via The Shine- Dalgarno Interaction
gi|149242713|pdb|2OW8|GG Chain g, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243623|pdb|2UU9|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243650|pdb|2UUA|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243677|pdb|2UUB|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243704|pdb|2UUC|F Chain F, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243843|pdb|2UXC|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Ucgu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157833695|pdb|1RIS|A Chain A, Crystal Structure Of The Ribosomal Protein S6 From
Thermus Thermophilus
gi|157836413|pdb|2UXB|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Gggu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836490|pdb|2V46|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836546|pdb|2V48|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430905|pdb|2UXD|F Chain F, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Cggg In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|160285944|pdb|2QNH|GG Chain g, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972854|pdb|2VQE|F Chain F, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972877|pdb|2VQF|F Chain F, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156501|pdb|3D5A|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156557|pdb|3D5C|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938824|pdb|2JL5|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4).
This File Contains The 30s Subunit.
gi|211938882|pdb|2JL7|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4).
This File Contains The 30s Subunit.
gi|218766778|pdb|3F1E|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766834|pdb|3F1G|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|224510688|pdb|3FIC|F Chain F, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
gi|226887379|pdb|2WDG|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887404|pdb|2WDH|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887493|pdb|2WDK|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887550|pdb|2WDM|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|226887634|pdb|2ZM6|F Chain F, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
gi|237823534|pdb|2WH1|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome
gi|237823593|pdb|2WH3|F Chain F, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome). This File
Contains The 30s Subunit.
gi|260099991|pdb|3HUW|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule I.
gi|260100047|pdb|3HUY|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule Ii.
gi|261824489|pdb|2WRI|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of
4).
gi|261824551|pdb|2WRK|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of
4).
gi|261824613|pdb|2WRN|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824672|pdb|2WRQ|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307172|pdb|3KIQ|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307230|pdb|3KIS|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307288|pdb|3KIU|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307346|pdb|3KIX|FF Chain f, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|281500591|pdb|2KJV|A Chain A, Solution Structure And Backbone Dynamics Of The
Ribosomal Protein S6wt
gi|288965609|pdb|3KNH|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526687|pdb|3KNJ|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii'
gi|289526712|pdb|3KNL|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526737|pdb|3KNN|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979509|pdb|3I8G|I Chain I, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979534|pdb|3I8H|I Chain I, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979593|pdb|3I9B|I Chain I, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule
B. The 50s Subunit Can Be Found In Pdb Entry 3i9c.
Molecule A In The S Asymmetric Unit Is Deposited As
3i9d (30s) And 3i9e (50s)
gi|294979647|pdb|3I9D|I Chain I, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule
A. The 50s Subunit Can Be Found In Pdb Entry 3i9e.
Molecule B In The S Asymmetric Unit Is Deposited As
3i9b (30s) And 3i9c (50s)
gi|295982080|pdb|2X9R|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982139|pdb|2X9T|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|300508610|pdb|3MR8|F Chain F, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3ms1. Molecule B In The Same Asymmetric Unit Is
Deposited As 3mrz (50s) And 3ms0 (30s).
gi|300508665|pdb|3MS0|F Chain F, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3mrz. Molecule A In The Same Asymmetric Unit Is
Deposited As 3mr8 (30s) And 3ms1 (50s).
gi|307567967|pdb|2XFZ|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568025|pdb|2XG1|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776617|pdb|3OTO|F Chain F, Crystal Structure Of The 30s Ribosomal Subunit From A
Ksga Mutant Of Thermus Thermophilus (Hb8)
gi|309320240|pdb|3OGE|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320261|pdb|3OGY|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320342|pdb|3OHC|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320363|pdb|3OHD|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320444|pdb|3OHY|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320495|pdb|3OI0|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320546|pdb|3OI2|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320597|pdb|3OI4|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207678|pdb|2XQD|F Chain F, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
70s Ribosome With A Gtp Analog
gi|313754004|pdb|2XSY|F Chain F, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754119|pdb|2XUY|F Chain F, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|322812555|pdb|3PYN|F Chain F, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s
Ribosome.
gi|322812608|pdb|3PYQ|F Chain F, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812661|pdb|3PYS|F Chain F, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812714|pdb|3PYU|F Chain F, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
gi|325533407|pdb|2Y0U|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533466|pdb|2Y0W|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533525|pdb|2Y0Y|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533584|pdb|2Y10|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533643|pdb|2Y12|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533702|pdb|2Y14|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533761|pdb|2Y16|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533820|pdb|2Y18|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|6739547|gb|AAF27295.1|AF146075_1 ribosomal protein S6 [Thermus thermophilus]
gi|46197670|gb|AAS82082.1| SSU ribosomal protein S6P [Thermus thermophilus HB27]
gi|55771627|dbj|BAD70068.1| 30S ribosomal protein S6 (TS9) [Thermus thermophilus HB8]
Length = 101
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|221485529|gb|EEE23810.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 406
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+LY V L R ++S +IK+ + Y +Q+ V G R +AYR++K A+ V
Sbjct: 282 RLYRVVALFRPELSVPKIKEAVRPYVDQLQQWRCRSLRVTYRGYRRLAYRVKKKDSAHVV 341
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
M P+A+H + K+ +D+N++R + L
Sbjct: 342 EMTFDLLPSAVHYLHVKLNLDDNIIRFMILK 372
>gi|94986796|ref|YP_594729.1| 30S ribosomal protein S6 [Lawsonia intracellularis PHE/MN1-00]
gi|166226976|sp|Q1MRG8|RS6_LAWIP RecName: Full=30S ribosomal protein S6
gi|94731045|emb|CAJ54408.1| ribosomal protein S6 [Lawsonia intracellularis PHE/MN1-00]
Length = 105
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 17 QQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMK 76
+ + + S+I++N G+ VN GMR +AY ++K+ + YYV + + P I E++
Sbjct: 17 DAREALLVKLVSIIEKNKGQFT-VNHWGMRDLAYPVQKHMRGYYVLLEYTTYPNIIEELE 75
Query: 77 RKMRIDENVLRSLTLLVDSHEQS 99
R +RI + + +T+ ++ H +
Sbjct: 76 RIIRITNGIFKFMTIKLEEHIEE 98
>gi|42560587|ref|NP_975038.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|61215588|sp|Q6MUK4|RS6_MYCMS RecName: Full=30S ribosomal protein S6
gi|42492083|emb|CAE76680.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301320575|gb|ADK69218.1| ribosomal protein S6 [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 137
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++L QD+ K+ + + +++ EN G++ N+LG+ Y I +K +Y
Sbjct: 3 KKYEVMYILDQDVKD--TKELVSKLDAILAEN-GKILESNDLGLLDFTYEINHKKKGFYH 59
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---------QSPTLTIQRHDRDDR 112
+ + + AI E +R +ID+NV+R+L L ++ + ++ + R+ +
Sbjct: 60 VVIVEATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKYEEEQREKK 119
Query: 113 NDRFPRDRNVDRKQHVS 129
N R P + + S
Sbjct: 120 NFRKPFIKREEAAVKES 136
>gi|331703044|ref|YP_004399731.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|256383834|gb|ACU78404.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384665|gb|ACU79234.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455925|gb|ADH22160.1| 30S ribosomal protein S6 [synthetic Mycoplasma mycoides
JCVI-syn1.0]
gi|328801599|emb|CBW53752.1| 30S ribosomal protein S6 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 137
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE +++L QD+ K+ + + +++ EN G++ N+LG+ Y I +K +Y
Sbjct: 3 KKYEVMYILDQDVKD--TKELVTKLDAILAEN-GKILESNDLGLLDFTYEINHKKKGFYH 59
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---------QSPTLTIQRHDRDDR 112
+ + + AI E +R +ID+NV+R+L L ++ + ++ + R+ +
Sbjct: 60 VVIVEATTQAIKEFERIAKIDKNVVRTLVLNTENIQNYEQSVVLSKTDMTKYEEEQREKK 119
Query: 113 NDRFPRDRNVDRKQHVS 129
N R P + + S
Sbjct: 120 NFRKPFIKREEAAVKES 136
>gi|11514242|pdb|1G1X|A Chain A, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|11514247|pdb|1G1X|F Chain F, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
Length = 98
Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|297622260|ref|YP_003703694.1| 30S ribosomal protein S6 [Truepera radiovictrix DSM 17093]
gi|297163440|gb|ADI13151.1| ribosomal protein S6 [Truepera radiovictrix DSM 17093]
Length = 116
Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++S Q+ + I+ GEV +E G + +AY IRK + YY
Sbjct: 1 MHNYDLNVILDPNLSEAQLGLEKDAIAAQIERFEGEVLSTDEWGNKRLAYPIRKLNEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+ + P A ++ +R+ +NV+R L P QR D P
Sbjct: 61 IIYRLRLPETAPRQLATNLRLRDNVMRVLITR-----DRPEQRTQRSSERDAGQEAP 112
>gi|6137689|pdb|1QD7|E Chain E, Partial Model For 30s Ribosomal Subunit
gi|7245453|pdb|1EG0|C Chain C, Fitting Of Components With Known Structure Into An 11.5
A Cryo-Em Map Of The E.Coli 70s Ribosome
Length = 97
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|150020531|ref|YP_001305885.1| 30S ribosomal protein S6 [Thermosipho melanesiensis BI429]
gi|167011249|sp|A6LKP9|RS6_THEM4 RecName: Full=30S ribosomal protein S6
gi|149793052|gb|ABR30500.1| ribosomal protein S6 [Thermosipho melanesiensis BI429]
Length = 119
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
M++YE +F+++ DI+ ++ + ++E G V V+ G+R AY ++K +A
Sbjct: 1 MRIYETMFIIKPDIAEEEREKIAQGVVDYLKEKLGAHVDNVDRWGIRKTAYPLKKYNEAD 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
Y + I ++ R+ LR T E+ ++ + + +++
Sbjct: 61 YTIVYFRGEGLDITVLESYFRVRPEFLRWQTFRRIDLEKKEKKQSRKEEGSENSEKVEE 119
>gi|94984274|ref|YP_603638.1| 30S ribosomal protein S6 [Deinococcus geothermalis DSM 11300]
gi|166226825|sp|Q1J215|RS6_DEIGD RecName: Full=30S ribosomal protein S6
gi|94554555|gb|ABF44469.1| ribosomal protein S6 [Deinococcus geothermalis DSM 11300]
Length = 102
Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++S++Q++ ++ ++ NG EV ++++G R +AY I K+R+ YY
Sbjct: 1 MNQYDLNLILNPNLSAEQLQIEKDYIETTLRNNGAEVTKLDDVGNRRMAYPIAKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ I + ++ +R+ +NV R L +
Sbjct: 61 LMYTIRAGGNPEKDIASTLRLRDNVRRVLVVK 92
>gi|294102405|ref|YP_003554263.1| ribosomal protein S6 [Aminobacterium colombiense DSM 12261]
gi|293617385|gb|ADE57539.1| ribosomal protein S6 [Aminobacterium colombiense DSM 12261]
Length = 94
Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L+ D+ + + + + + GGE+ + G R +AY + ++ +Y
Sbjct: 1 MRPYEMMILVNADLEEPKEEVSKVEEVV--RSLGGELSKTDIWGKRKLAYPVNEHTDGFY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
M P I E++R + + +NV R + + +D
Sbjct: 59 AVMTFKLNPDEITELERLLSLRQNVHRQMIVRLDEE 94
>gi|116782057|gb|ABK22352.1| unknown [Picea sitchensis]
gi|116793661|gb|ABK26832.1| unknown [Picea sitchensis]
Length = 206
Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR----- 56
+ YE + +LR DIS ++ +Y+ +I GG V GM +AY I+K
Sbjct: 101 RDYETMAVLRPDISEEERLALTQRYEEIIVAGGGMGVEVFNRGMIPLAYAIKKKNLSGKS 160
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I E+++K++ D++V+RS T +
Sbjct: 161 NTYLDGVYLLFTYFTKPESIPELEKKLKTDDDVIRSSTFKANE 203
>gi|116780928|gb|ABK21884.1| unknown [Picea sitchensis]
Length = 206
Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR----- 56
+ YE + +LR DIS ++ +Y+ +I GG V GM +AY I+K
Sbjct: 101 RDYETMAVLRPDISEEERLALTQRYEEIIVAGGGMGVEVFNRGMIPLAYAIKKKNLSGKS 160
Query: 57 ----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I E+++K++ D++V+RS T +
Sbjct: 161 NTYLDGVYLLFTYFTKPESIPELEKKLKTDDDVIRSSTFKANE 203
>gi|291296160|ref|YP_003507558.1| 30S ribosomal protein S6 [Meiothermus ruber DSM 1279]
gi|290471119|gb|ADD28538.1| ribosomal protein S6 [Meiothermus ruber DSM 1279]
Length = 104
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 44/92 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +L ++ Q ++ ++ +G ++ V++ G R +AY I+K+ +
Sbjct: 1 MPQYEIGIILNPNLDGAQAALEKDVIKAALERHGASIKNVDDWGNRRLAYPIQKDPEGNV 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
VF + ++R++R+ ++V R +
Sbjct: 61 VFYTVEMAGNNNAALERELRLRDHVRRVTIIR 92
>gi|10835884|pdb|1CQM|A Chain A, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835885|pdb|1CQM|B Chain B, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835886|pdb|1CQN|A Chain A, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization.
gi|10835887|pdb|1CQN|B Chain B, Protein Aggregation And Alzheimer's Disease:
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization
Length = 101
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V LG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|190571063|ref|YP_001975421.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357335|emb|CAQ54765.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 257
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+ S Q+ T+ I+ +G + G+ AY I K + +Y M I+ + +
Sbjct: 160 VDSNQLNKTLEVLLKNIEASG--LIKYEYWGLLDFAYPINKMKSGHYCMMCISFTSSIMD 217
Query: 74 EMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
E +R+++++EN++R L++ V+ + + + + +
Sbjct: 218 EFERRVKLNENIIRHLSVRVNEFFKGKSYMMDKQIEEK 255
Score = 36.9 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM 45
M LYE F+ + ++ Q++++ + + L++ +V G+
Sbjct: 1 MNLYEFTFIAQPNLLQQEVEEMVQELAILLKNIKADVISQEVKGL 45
>gi|6730019|pdb|1LOU|A Chain A, Ribosomal Protein S6
Length = 101
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q + G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRAAENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|331212125|ref|XP_003307332.1| hypothetical protein PGTG_00282 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297735|gb|EFP74326.1| hypothetical protein PGTG_00282 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 117
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------ 54
M LY L + ++ + +L++ NGG VR ++ LG R RIR
Sbjct: 1 MPLYSLSCLALHYSTYTPLRSLVHTAATLVESNGGLVRQIDYLGRRNTPQRIRAPGLVPG 60
Query: 55 -NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+A Y M + P + E+ ++R+D VLR TLLV H + T Q
Sbjct: 61 GVGEADYWTMQFDANPPTVRELTNRLRVDPRVLRHTTLLVGMHTDDLSRTFQS 113
>gi|82408146|pdb|2BVZ|A Chain A, Mutant Of The Ribosomal Protein S6
Length = 101
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P +++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDAARELRIRDNVRRVMVVK 92
>gi|213019584|ref|ZP_03335390.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995006|gb|EEB55648.1| 30s ribosomal protein s6 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 264
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+ S Q+ T+ I+ +G + G+ AY I K + +Y M I+ + +
Sbjct: 167 VDSNQLNKTLEVLLKNIEASG--LIKYEYWGLLDFAYPINKMKSGHYCMMCISFTSSIMD 224
Query: 74 EMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDD 111
E +R+++++EN++R L++ V+ + + + + +
Sbjct: 225 EFERRVKLNENIIRHLSVRVNEFFKGKSYMMDKQIEEK 262
>gi|26553568|ref|NP_757502.1| 30S ribosomal protein S6 [Mycoplasma penetrans HF-2]
gi|32171557|sp|Q8EWT7|RS6_MYCPE RecName: Full=30S ribosomal protein S6
gi|26453574|dbj|BAC43906.1| ribosomal protein S6 [Mycoplasma penetrans HF-2]
Length = 145
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++ I + +S+++++ + ++G++ +AY I K + YY
Sbjct: 1 MPKYEIMLVVDGSIEESKATAVANDLKSILKKS--TDLKLEKMGLKDLAYPINKKSRGYY 58
Query: 61 VFMNI-ASPPAAIHEMKRKMRIDENVLRSLTLLVD-----SHEQSPTLTIQRHDRDDRND 114
N PA+I E +R + + VLR L + ++ + +P ++ R +R
Sbjct: 59 YLFNFYNEDPASIQEFRRVTLLKKEVLRHLIINLEKDYGYKAKTNPKKIVRSQFRAERYK 118
Query: 115 RFPRDRNVDRKQHVSE 130
R ++++ E
Sbjct: 119 RIKEQVLAEQEKIRKE 134
>gi|15805139|ref|NP_293824.1| 30S ribosomal protein S6 [Deinococcus radiodurans R1]
gi|13959512|sp|Q9RY52|RS6_DEIRA RecName: Full=30S ribosomal protein S6
gi|6457765|gb|AAF09691.1|AE001873_1 ribosomal protein S6 [Deinococcus radiodurans R1]
Length = 102
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 50/92 (54%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L +IS++Q++ ++ ++ G E+ +++LG R +AY++ K+R+ YY
Sbjct: 1 MNQYDLNLILNPNISAEQVQTEKDYIENAVRNAGAEISNLDDLGNRRLAYQVGKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ I + + +R+ +NV R L +
Sbjct: 61 LMYTIKASGNPETAIASSLRLRDNVRRVLVVK 92
>gi|206895807|ref|YP_002246971.1| ribosomal protein S6 [Coprothermobacter proteolyticus DSM 5265]
gi|206738424|gb|ACI17502.1| ribosomal protein S6 [Coprothermobacter proteolyticus DSM 5265]
Length = 94
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + + R + ++ +Q G+V ++ G+R +AY I K +AYY
Sbjct: 3 RKYELMVIYRAE-DDNGYQEGNDWVTEKVQSYQGQVTKLDPWGLRRLAYPIEKRTQAYYS 61
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
I P + E + +++DE +LR +
Sbjct: 62 VFQIELPVENLDEFSQDLKVDERILRFMITR 92
>gi|283780443|ref|YP_003371198.1| 30S ribosomal protein S6 [Pirellula staleyi DSM 6068]
gi|283438896|gb|ADB17338.1| ribosomal protein S6 [Pirellula staleyi DSM 6068]
Length = 131
Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE++ +L + +Q G +LI++ GGEV + + +AY I ++K Y
Sbjct: 6 YENMVILDSNKYAQDPGGMGGTIPALIEKLGGEVLVSRLWNEQRLAYPIDGHKKGTYWIT 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR--HDRDDRNDRFPRDRN 121
+ +++ ++RI+E+++R +TL VD + + H R + P
Sbjct: 66 YFRLDGSKLNDFHSQIRINESIVRHMTLKVDPRLVDTLVEHAKGGHRRVEAAPVAPALEV 125
Query: 122 VDRKQH 127
+ +
Sbjct: 126 PEEAAN 131
>gi|111226186|ref|YP_716980.1| 30S ribosomal protein S6 [Frankia alni ACN14a]
gi|111153718|emb|CAJ65476.1| 30S ribosomal protein S6 [Frankia alni ACN14a]
Length = 100
Score = 84.3 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 52/91 (57%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L D+ + + ++ QY ++++ GG V V+ G R +AY I K+ + Y +++ +
Sbjct: 1 MILDADLEERTVAPSLDQYLGVVRQGGGVVEKVDIWGRRRLAYEIAKSNEGIYAVIDLHA 60
Query: 68 PPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
P + E+ R++ ++E+V+R+ + + ++
Sbjct: 61 EPDVVAELDRQLVLNESVIRTKVIRLPEPKK 91
>gi|325120265|emb|CBZ55819.1| putative ribosomal protein S6 [Neospora caninum Liverpool]
Length = 398
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ Y V L R D+ IK+ + Y +Q+ V G R +AYR++K A+ V
Sbjct: 274 RPYRVVALFRPDMPLPNIKEAVRPYVDQLQQWRCRNLRVTYRGYRRLAYRVKKKDSAHVV 333
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
M P+A+H + K+ +D+N++R + L
Sbjct: 334 EMTFDLLPSAVHYLHVKLNLDDNIIRFMILK 364
>gi|313679093|ref|YP_004056832.1| SSU ribosomal protein s6p [Oceanithermus profundus DSM 14977]
gi|313151808|gb|ADR35659.1| SSU ribosomal protein S6P [Oceanithermus profundus DSM 14977]
Length = 102
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ Q++ Q+ + ++ EV+ ++E G R +AY I K+ + YY
Sbjct: 1 MPQYDVGIILNPNLEPTQLQLEKDMIQAALDKHKAEVKAIDEWGNRRLAYPIEKDPEGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+F + ++ ++RI +NV R L +
Sbjct: 61 IFYTVEMEAGEAAPLEAELRIRDNVRRVLIVR 92
>gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ ++ GG V G+ +AY I+K K
Sbjct: 109 RQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGET 168
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ M D+NV+RS++ +
Sbjct: 169 NTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRK 211
>gi|320104414|ref|YP_004180005.1| 30S ribosomal protein S6 [Isosphaera pallida ATCC 43644]
gi|319751696|gb|ADV63456.1| ribosomal protein S6 [Isosphaera pallida ATCC 43644]
Length = 134
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 49/100 (49%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +FLL +S ++T+ Q ++ ++G E+ + + +AY ++ +RK Y+
Sbjct: 2 YEGMFLLDSAKASVAWEETVQQVHGILTKHGSEIVASRQWDEKRLAYPVKGHRKGTYLLT 61
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
+ + + ++ ++++ +LR L L V ++
Sbjct: 62 FFKADASRLKDISHDCKLNDVILRELILKVHPKLAEASVQ 101
>gi|297565276|ref|YP_003684248.1| 30S ribosomal protein S6 [Meiothermus silvanus DSM 9946]
gi|296849725|gb|ADH62740.1| ribosomal protein S6 [Meiothermus silvanus DSM 9946]
Length = 108
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++ QI Q Q+ ++ V+ ++E G R +AY I K+R+ Y+
Sbjct: 1 MPQYDLNVILSPNLDPAQIALEKDQIQAALERYKASVKHLDEWGSRRLAYPIEKDREGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + A + +++++ + +NV R + +
Sbjct: 61 LMYTVEMEKEAANPLEKELLLRDNVRRVMIVR 92
>gi|307107099|gb|EFN55343.1| hypothetical protein CHLNCDRAFT_134353 [Chlorella variabilis]
Length = 166
Score = 83.1 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +LR ++ ++ + ++Q+ +Q+ G G + +AY I++ + YV
Sbjct: 72 YETMIVLRPTMADEERDQELAKFQAFLQKQGASQLSDMVRGRQRLAYPIKRFTEGIYVLY 131
Query: 64 NIAS-------------PPAAIHEMKRKMRIDENVLRSLTLLV 93
+ P A E+ N+LR +T V
Sbjct: 132 TYTAAPTAGQAVQKYLSTPQAGAEL--------NILRHMTFRV 166
>gi|58584757|ref|YP_198330.1| ribosomal protein S6 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|75497804|sp|Q5GSD6|RS6_WOLTR RecName: Full=30S ribosomal protein S6
gi|58419073|gb|AAW71088.1| Ribosomal protein S6 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 260
Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 15 SSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHE 74
Q T+ I+ +G + G+ AY I K + +Y M I+S + E
Sbjct: 164 EPNQSNKTLEMLLDNIEASG--LIKYEYWGLLDFAYPINKMKSGHYCIMCISSTSNIMDE 221
Query: 75 MKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
R+++++EN++R L++ VD + + + + +
Sbjct: 222 FVRRIKLNENIIRHLSVHVDKFFEGKSHMMNKQVEE 257
>gi|257458036|ref|ZP_05623195.1| ribosomal protein S6 [Treponema vincentii ATCC 35580]
gi|257444749|gb|EEV19833.1| ribosomal protein S6 [Treponema vincentii ATCC 35580]
Length = 93
Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + I Q K I +S++ + ++ + G R + Y I+K K Y
Sbjct: 1 MRKYELMTVF--PIEEAQFKPGIEDVRSVLGDFSVQIDSEDPFGDRELTYEIKKRTKGRY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V NI + P I E+ K ++++N+L L + VD
Sbjct: 59 VLFNIHAEPDKIIELDHKFKLNQNLLTFLFIKVDE 93
>gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ ++ GG V G+ +AY I+K K
Sbjct: 109 RQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGET 168
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ M D+NV+RS++ +
Sbjct: 169 NTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRK 211
>gi|160902034|ref|YP_001567615.1| ribosomal protein S6 [Petrotoga mobilis SJ95]
gi|160359678|gb|ABX31292.1| ribosomal protein S6 [Petrotoga mobilis SJ95]
Length = 125
Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRK--NRKA 58
+ YE +F++R DI ++ + + I+ GEV G+R +AYR +K +
Sbjct: 4 RYYETMFVVRTDIPEEERNALAEKVRGWIEGQLEGEVEEFTRWGVRKLAYRTQKGKFTEG 63
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y ++ + P I+++ ++++ + R T+ + E+
Sbjct: 64 DYTYIIYKADPEKINQLDDLFKVNQEIFRFQTIRREDLEKK 104
>gi|226354822|ref|YP_002784562.1| 30S ribosomal protein S6 [Deinococcus deserti VCD115]
gi|259495329|sp|C1CXK2|RS6_DEIDV RecName: Full=30S ribosomal protein S6
gi|226316812|gb|ACO44808.1| putative 30S ribosomal protein S6 [Deinococcus deserti VCD115]
Length = 102
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 51/92 (55%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +L ++S++Q++ ++ ++ G EV +++LG R +AY++ K+R+ YY
Sbjct: 1 MNQYDLNLILNPNLSAEQVQIEKDYIETALKNVGAEVSNLDDLGNRRLAYQVGKDREGYY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ I + ++ +R+ ++V R L +
Sbjct: 61 LMYTIKAGGNPEKDIASSLRLRDHVRRVLVVK 92
>gi|82408150|pdb|2BXJ|A Chain A, Double Mutant Of The Ribosomal Protein S6
gi|82408151|pdb|2BXJ|B Chain B, Double Mutant Of The Ribosomal Protein S6
Length = 101
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q + G V V ELG+R +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRAAENYGARVEKVEELGLRRLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P +++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDAARELRIRDNVRRVMVVK 92
>gi|86156547|ref|YP_463332.1| SSU ribosomal protein S6P [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773058|gb|ABC79895.1| SSU ribosomal protein S6P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 148
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++LL+ + +Q+ + + + ++ GG+V G R A+ + KN KA Y+
Sbjct: 9 REYETIYLLKSETPDEQVDEIKERLRGVVSRQGGKVIRFTNQGKRKTAFPVAKNAKALYM 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV------DSHEQSPTLTIQRHDRDDR 112
P + E++R +++ + V + ++ + D+ + + IQ D + +
Sbjct: 69 HCLYIGKPGLVTELERNLKMIDVVTKFQSVKLADGVDFDARQVEADVKIQAVDDEQK 125
>gi|145341069|ref|XP_001415638.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
gi|144575861|gb|ABO93930.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
Length = 126
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LY+ + ++ + D + + + + + GG V V G RT+AY R K+
Sbjct: 1 MVLYDAMIVVSAKVPKTACADVLRRLGASVMDAGGVVTNVASYGARTLAYEFRRPGEKHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+A +V M+ +PP + E +R +RIDE VLR +
Sbjct: 61 EAQFVKMSFNAPPTLVAEAERTLRIDERVLRWVITK 96
>gi|156081732|ref|XP_001608359.1| 30S ribosomal protein S6, puatative [Plasmodium vivax SaI-1]
gi|148800930|gb|EDL42335.1| 30S ribosomal protein S6, puatative [Plasmodium vivax]
Length = 243
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y L + + +IK I +Y ++ GE LG R + I+K +AYYV
Sbjct: 123 YNVDLLFSCNFTISEIKKKIAEYTYELKLVDGEAFRALYLGKRRLVRPIKKQMEAYYVLF 182
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ P+ IHE+KRK+R+ + VLR + +
Sbjct: 183 SFQMYPSLIHEIKRKLRLQDAVLRFMVTKNEK 214
>gi|168335181|ref|ZP_02693286.1| ribosomal protein S6 [Epulopiscium sp. 'N.t. morphotype B']
Length = 58
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 39 LVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V++ G + +AY I K ++ +Y F+ + P A E++ ++RI E VLR L + ++
Sbjct: 1 KVDDWGKKKLAYEIDKKKEGFYYFIEFNAEPDAPAEIESRLRITEAVLRYLIVSLEE 57
>gi|197120546|ref|YP_002132497.1| ribosomal protein S6 [Anaeromyxobacter sp. K]
gi|220915257|ref|YP_002490561.1| ribosomal protein S6 [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170395|gb|ACG71368.1| ribosomal protein S6 [Anaeromyxobacter sp. K]
gi|219953111|gb|ACL63495.1| ribosomal protein S6 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 148
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE ++LL+ + +Q+ + + + ++ GG+V G R A+ + KN KA Y+
Sbjct: 9 REYETIYLLKAETPDEQVDEIKERLRGVVSRQGGKVIRFTNQGKRKTAFPVAKNAKALYM 68
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV------DSHEQSPTLTIQRHDRDDR 112
P + E++R +++ + V + ++ + D+ + + +Q + + +
Sbjct: 69 HCLYVGKPGLVTELERNLKMIDVVTKFQSVKLADGVDFDARQVEADVKVQAVEDEQK 125
>gi|238917875|ref|YP_002931392.1| small subunit ribosomal protein S6 [Eubacterium eligens ATCC
27750]
gi|238873235|gb|ACR72945.1| small subunit ribosomal protein S6 [Eubacterium eligens ATCC
27750]
Length = 95
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE ++ ++ + TI + LI GG + + +AY I+ + +Y
Sbjct: 1 MNKYELALVVSANVEDEVRTATIEKVNELITRFGGTITDPGTSEKKKLAYDIQHMSEGFY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
F+ + AA E++ ++RI +NVLR L +
Sbjct: 61 SFIKFEAEAAAPAEIESRIRIMDNVLRFLIVK 92
>gi|297836915|ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332180|gb|EFH62598.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 80.8 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK K
Sbjct: 105 RQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGET 164
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ + D++++RS + +
Sbjct: 165 NTYLDGIYLLFTYFTKPESITPLETVLTADDDIIRSSSFKIKK 207
>gi|255084283|ref|XP_002508716.1| predicted protein [Micromonas sp. RCC299]
gi|226523993|gb|ACO69974.1| predicted protein [Micromonas sp. RCC299]
Length = 160
Score = 80.8 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M LYE + +++ Q+ D + + + + + GG + + G R +AY + ++
Sbjct: 1 MVLYELMVMVKSATPRAQLADILRRAGTRVLDAGGVITDITSFGTRPLAYEFKSPGERHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+A+ V ++ S P I +MK MR DE VLR + + + D R
Sbjct: 61 EAHMVQISFNSAPTLIEDMKHDMRTDERVLRWIAVKKKAL----------RPLSDYKARD 110
Query: 117 PRDRNVDRKQHVSEEK 132
PR+ N+ E
Sbjct: 111 PRNLNLPAATTTKESA 126
>gi|290999713|ref|XP_002682424.1| predicted protein [Naegleria gruberi]
gi|284096051|gb|EFC49680.1| predicted protein [Naegleria gruberi]
Length = 169
Score = 80.8 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M LYE V+L+ + + + + ++ EN G +R ++ +G+ +AY + K+
Sbjct: 1 MPLYELVYLVNPKAALPTVAQVMKRNAQVVFENKGVIRRLDNMGILPLAYPMYRHREKHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
K +V M + P + E+ +MR D+ + R
Sbjct: 61 KGRWVMMLFDASPTCVKELNEQMRKDQQIFRWACYKQK 98
>gi|301167905|emb|CBW27490.1| putative 30S ribosomal protein S6 and S18 fusion [Bacteriovorax
marinus SJ]
Length = 207
Score = 80.4 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAYYVF 62
YE + + + + +Q ++ N GEV L ++ G + A K R +Y++
Sbjct: 3 YELAIVAKTETTEEQRAALQAMVTEVVGANAGEVFLTDDWGNKHFAQATSKGVRTGHYLY 62
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ A E++R+++I+E++L+ + + V +
Sbjct: 63 FIYSGNGAVNLEIERRLKINESILKKMIVKVGETAE 98
>gi|330836669|ref|YP_004411310.1| 30S ribosomal protein S6 [Spirochaeta coccoides DSM 17374]
gi|329748572|gb|AEC01928.1| 30S ribosomal protein S6 [Spirochaeta coccoides DSM 17374]
Length = 100
Score = 80.4 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + D + ++ + E G + +++G+RT+AY I+K K +Y
Sbjct: 1 MRDYEFTVIF--DANEEKTTAGLELVTQAFAEKGVIITKQDDMGVRTLAYLIKKQDKGHY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
V+ + + PA I +++ + +L+ L + + H
Sbjct: 59 VYFELQADPADIKGYEKQFLLAPQILKFLFVKKEIHAPK 97
>gi|237839733|ref|XP_002369164.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211966828|gb|EEB02024.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221484546|gb|EEE22840.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504742|gb|EEE30407.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 163
Score = 80.4 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE L + + I+ + Q ++LI ++ G + V +LG R A+R+ K R+ +
Sbjct: 49 MVFYETFVLFSKRVQRADIRQLLKQQEALITKHHGSMLAVRDLGWRKTAFRVIKPRQGIF 108
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
F + + PAAI EM + ++ VLR T+ + T H RD
Sbjct: 109 WFGRLFYFSFGANPAAITEMSQSLQSTNGVLRHATVRMKKRHNLMTYNHHIHARD 163
>gi|167957467|ref|ZP_02544541.1| SSU ribosomal protein S6P [candidate division TM7 single-cell
isolate TM7c]
Length = 71
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE L+R D+ S I+ I + + ++++ GGE++ + G + +AY+IRK A Y
Sbjct: 1 MRKYELTVLIRPDLESD-IEAPINKVRDIVKKAGGEIKKEDNWGKKKLAYKIRKEDFAIY 59
Query: 61 VFMNIASPPAAI 72
V+M+I P A
Sbjct: 60 VYMDIILPADAP 71
>gi|50364895|ref|YP_053320.1| 30S ribosomal protein S6 [Mesoplasma florum L1]
gi|81391993|sp|Q6F237|RS6_MESFL RecName: Full=30S ribosomal protein S6
gi|50363451|gb|AAT75436.1| 30S ribosomal protein S6 [Mesoplasma florum L1]
Length = 290
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE +F+L QD + + +I ++ G+V N+LG+ AY+I +K +Y
Sbjct: 3 RKYEAMFILDQDTQD--VNALSSRMIEIISKD-GKVIEKNDLGLIEFAYKINHKKKGHYF 59
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS---HEQSPTLT---IQRHDRDDRNDR 115
+ + + AI E +R I++NV+R+L + ++ +EQS L+ + + + + + R
Sbjct: 60 VVIVEATAEAIKEFERIANIEKNVVRTLIINTENEQGYEQSVQLSKTDMTKFEEERKAKR 119
Query: 116 FPRDRNVDRKQHVSEEK 132
+ V ++ + EK
Sbjct: 120 DFKKPFVKKEFNKPTEK 136
>gi|15217660|ref|NP_176632.1| ribosomal protein S6 family protein [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor
gi|18252237|gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
Length = 207
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK K
Sbjct: 101 RQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGET 160
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ + D++++RS + +
Sbjct: 161 NTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKK 203
>gi|6633831|gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY IRK K
Sbjct: 125 RQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGET 184
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ + D++++RS + +
Sbjct: 185 NTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKK 227
>gi|224053759|ref|XP_002297965.1| predicted protein [Populus trichocarpa]
gi|222845223|gb|EEE82770.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K K
Sbjct: 79 RQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGES 138
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I +++ + D++V+RS + V
Sbjct: 139 NTYLDGIYLLFTYFTKPESIGILEQTLNTDDDVIRSSSFKVRK 181
>gi|114777952|ref|ZP_01452866.1| Ribosomal protein S6 [Mariprofundus ferrooxydans PV-1]
gi|114551739|gb|EAU54291.1| Ribosomal protein S6 [Mariprofundus ferrooxydans PV-1]
Length = 135
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 42/97 (43%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRI 81
+ ++++GG + G R +AY I ++ YV + P A+ ++ + +
Sbjct: 1 MTDELIGKVEKSGGRIVKRENWGSRPLAYSIANRKRGNYVLLVTDGEPEALKTLEHAISL 60
Query: 82 DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
+E ++RS T+ + P+ +R + + P
Sbjct: 61 EERIIRSQTVKLTELSDEPSPLARRKKPAESEEATPE 97
>gi|255555639|ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 205
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K K
Sbjct: 100 RQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGET 159
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ + D++++RS + +
Sbjct: 160 NTYLDGIYLLFTYFTKPESIEMLEATLNTDDDIIRSSSFKIRK 202
>gi|193216924|ref|YP_002000166.1| ribosomal protein S6 [Mycoplasma arthritidis 158L3-1]
gi|226703490|sp|B3PN60|RS6_MYCA5 RecName: Full=30S ribosomal protein S6
gi|193002247|gb|ACF07462.1| ribosomal protein S6 [Mycoplasma arthritidis 158L3-1]
Length = 160
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + L D + +Q+ + + S+++++ ++ + +AY I K +A Y
Sbjct: 1 MSNYEIMILANPDSTLEQVSELL---FSVLKKSDTKIEKLE---RSELAYPIHKLTRATY 54
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF-PRD 119
+ + S P + E+ RK+ I + +LRSL + +DS ++ + + RF PR
Sbjct: 55 YLVTVKSDPQLMAELTRKLNIAKFILRSLIINLDS---------EKGLKPRKVKRFIPRA 105
Query: 120 RNVDRKQHVSEEKP 133
+N DR + + +P
Sbjct: 106 KNNDRSANQGDRRP 119
>gi|323507770|emb|CBQ67641.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 136
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
M LYE + + S ++D + LI ENGG VR V G R + R R++++
Sbjct: 1 MPLYELLCIAASSAESAPLRDLVKSTSKLILENGGAVRGVQYWGQRRLPQRARRHQQYHS 60
Query: 58 -AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
Y M+ + + + ++R D V++ L + T D +D
Sbjct: 61 TGDYWLMHFDTNAPVLKSLNDRLRADPRVIKWTALKLGDKLDQITPKATSGGLDSISD-A 119
Query: 117 PRDRN 121
P R
Sbjct: 120 PEARA 124
>gi|254413750|ref|ZP_05027519.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
gi|196179347|gb|EDX74342.1| ribosomal protein S6 [Microcoleus chthonoplastes PCC 7420]
Length = 96
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
+S +Q+ + +Y+ +QE GGE + G R +AY I ++R+ Y+ MN +PP
Sbjct: 1 MSEEQVNQAVTKYKDFLQEQGGEEIEIQHRGKRRLAYPIERHREGVYIQMNYKAPPIHEA 60
Query: 74 EMKRKMR 80
+++R MR
Sbjct: 61 QLQRAMR 67
>gi|281356647|ref|ZP_06243138.1| ribosomal protein S6 [Victivallis vadensis ATCC BAA-548]
gi|281316774|gb|EFB00797.1| ribosomal protein S6 [Victivallis vadensis ATCC BAA-548]
Length = 109
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK YE VF+L + + ++ LI GG + +G R Y I K + Y
Sbjct: 1 MKKYEAVFILDIRRTDDEGAAFCKEFSELIASLGGTLESTTPMGRRQFTYEIDKRKAGIY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
A + ++K K ++DE +LR+L ++ D
Sbjct: 61 FDFVFELETAKVKDIKEKYKLDERILRNLIVIYD 94
>gi|328948103|ref|YP_004365440.1| 30S ribosomal protein S6 [Treponema succinifaciens DSM 2489]
gi|328448427|gb|AEB14143.1| 30S ribosomal protein S6 [Treponema succinifaciens DSM 2489]
Length = 96
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + ++ K + ++ + G E+ G R + Y ++K ++ ++
Sbjct: 1 MRKYELMTIF--PLEEEKSKVGLETLRADLASFGAEIEKEEVFGDRDLTYEVKKQKRGHF 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V + PA I E+ K + + N+L+ L +L++S
Sbjct: 59 VLFTLKLNPAKIIELDGKFKFNNNLLKYLFVLIES 93
>gi|307719001|ref|YP_003874533.1| hypothetical protein STHERM_c13190 [Spirochaeta thermophila DSM
6192]
gi|306532726|gb|ADN02260.1| hypothetical protein STHERM_c13190 [Spirochaeta thermophila DSM
6192]
Length = 114
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 2 KLYEHVFLLR--QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
+ YE V + R Q++ +Q + T+ ++ ++ +++ ++G R +AY+I+K + +
Sbjct: 22 RTYELVCVFRSEQELYAQGKQKTVE----VLSKHEAQIQKEEDMGERQLAYQIKKQTRGH 77
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + P I +++ ++ VLR L VD
Sbjct: 78 YYVWVFNAKPEIISKLEHDLKYIPEVLRFLVTRVD 112
>gi|9256914|pdb|1QJH|A Chain A, Protein Aggregation And Alzheimer's Disease.
Crystallographic Analysis Of The Phenomenon. Engineered
Version Of The Ribosomal Protein S6 Used As A Stable
Scaffold To Study Oligomerization
Length = 101
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +L ++ Q+ Q ++ G V V LG+ +AY I K+ + Y+
Sbjct: 1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLMVLAYPIAKDPQGYF 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ + P ++++ R++RI +NV R + +
Sbjct: 61 LWYQVEMPEDRVNDLARELRIRDNVRRVMVVK 92
>gi|320333136|ref|YP_004169847.1| 30S ribosomal protein S6 [Deinococcus maricopensis DSM 21211]
gi|319754425|gb|ADV66182.1| 30S ribosomal protein S6 [Deinococcus maricopensis DSM 21211]
Length = 103
Score = 78.1 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
Y+ +L +S++Q+ + + G E+ V+E G R +AY I K R+ YY+
Sbjct: 3 AQYDLNLILNPSLSAEQLATEKTYIEGAVTNAGAELVNVDEAGNRRLAYSIEKEREGYYL 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
F I + ++ +R+ +NV R L +
Sbjct: 63 FYTIKASGNPEKDIAASLRLRDNVRRVLVVK 93
>gi|325116159|emb|CBZ51713.1| unnamed protein product [Neospora caninum Liverpool]
Length = 115
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE L + + I+ + Q ++LI ++ G + V +LG R A+R+ K R+ +
Sbjct: 1 MVFYETFVLFSKRVQRADIRQLLKQQEALITKHHGSMLAVRDLGWRKTAFRVIKPRQGIF 60
Query: 61 VF-----MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
F + + PAAI EM + ++ VLR T+ + T H RD
Sbjct: 61 WFGRLFYFSFGANPAAITEMSQSLQSTNGVLRHATVRMKKRHNLMTYNHYIHARD 115
>gi|168239685|ref|ZP_02664743.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197287654|gb|EDY27045.1| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 49
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAY 50
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R +AY
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRRQLAY 49
>gi|302339370|ref|YP_003804576.1| ribosomal protein S6 [Spirochaeta smaragdinae DSM 11293]
gi|301636555|gb|ADK81982.1| ribosomal protein S6 [Spirochaeta smaragdinae DSM 11293]
Length = 93
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + +S ++ + +++ G ++ + G+R AY I+K ++ Y
Sbjct: 1 MRTYELTTIFK--MSDEEFSKGKEFVSAELEKAGATIKSQEDKGIREFAYPIKKEKRGRY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+++ PA + +++R + ++VL+ L + +S
Sbjct: 59 LYLETELNPAKVIDLERAFLLSDSVLKFLFVKKES 93
>gi|315644251|ref|ZP_07897421.1| ribosomal protein S6 [Paenibacillus vortex V453]
gi|315280626|gb|EFU43915.1| ribosomal protein S6 [Paenibacillus vortex V453]
Length = 53
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 43 LGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
+G R +AY I+K R +V +N + P + E++R M+I + V+R L
Sbjct: 1 MGKRRLAYEIKKFRDGVFVLVNFNATPEVVAELERLMKISDEVIRYLI 48
>gi|42527185|ref|NP_972283.1| 30S ribosomal protein S6 [Treponema denticola ATCC 35405]
gi|61216252|sp|Q73M32|RS6_TREDE RecName: Full=30S ribosomal protein S6
gi|41817609|gb|AAS12194.1| ribosomal protein S6 [Treponema denticola ATCC 35405]
gi|325474235|gb|EGC77423.1| 30S ribosomal protein S6 [Treponema denticola F0402]
Length = 93
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + K I S++ + G +++ G R +AY I+K K Y
Sbjct: 1 MRNYELMTVF--PVEEDLYKPGIDALHSILADFGVQIKSEEPFGDRDLAYEIKKKTKGRY 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V NI + PA + E+ ++ ++ +L L + ++
Sbjct: 59 VLFNIEADPAKMIELDKRFKLITQMLTYLFVRLE 92
>gi|242037445|ref|XP_002466117.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
gi|241919971|gb|EER93115.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
Length = 215
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 108 RQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 167
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 168 PSTYYDGIYLLITYFTKPESMDALQLRLNADDDVIRSTSFKV 209
>gi|225426247|ref|XP_002264340.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 199
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D+S + +Y+ L+ GG V G+ +AY I+K K
Sbjct: 94 RQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGES 153
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P ++ ++ + D++V+RS + +
Sbjct: 154 NTYLDGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRK 196
>gi|196005861|ref|XP_002112797.1| hypothetical protein TRIADDRAFT_56309 [Trichoplax adhaerens]
gi|190584838|gb|EDV24907.1| hypothetical protein TRIADDRAFT_56309 [Trichoplax adhaerens]
Length = 186
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM-RTIAYRIRKNR--- 56
M YE ++R +Q + + + S I GG +R V LG R + YRIR +
Sbjct: 1 MPRYEMPIIIRCMKQPEQYIEMLKRTASRIFNQGGVIRKVENLGTDRLLPYRIRAHTVWY 60
Query: 57 -KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ Y + P + + ++++DE+V+R + D ++ ++ +
Sbjct: 61 DRGSYFLFDFHGAPPIVKRLHSELKLDEDVIRHSIVSNDDPVT---ISFRKEKK 111
>gi|30468113|ref|NP_849000.1| ribosomal protein S6 [Cyanidioschyzon merolae strain 10D]
gi|68052983|sp|Q85G29|RR6_CYAME RecName: Full=30S ribosomal protein S6, chloroplastic
gi|30409213|dbj|BAC76162.1| 30S ribosomal protein S6 [Cyanidioschyzon merolae strain 10D]
Length = 99
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM--RTIAYRIRKNRKAYYV 61
YE ++L+R D++ ++IK I +++E+ R V G R +AY+I K + +YV
Sbjct: 12 YELMWLIRPDLNQEEIKKEIEAVMKVLEES----RRVQLNGKTTRKLAYKIGKYEEGHYV 67
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
M + ++++ ++++E LR + L
Sbjct: 68 QMEFDGYGRIVKKLEKYLQVNEKGLRYMILR 98
>gi|167973252|ref|ZP_02555529.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167974088|ref|ZP_02556365.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975516|ref|ZP_02557793.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167988274|ref|ZP_02569945.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|168362595|ref|ZP_02695774.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|195867987|ref|ZP_03079983.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273520|ref|ZP_03206056.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554099|ref|YP_002285001.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550825|ref|ZP_03771774.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551074|ref|ZP_03772020.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|226705645|sp|B5ZC61|RS6_UREU1 RecName: Full=30S ribosomal protein S6
gi|171903342|gb|EDT49631.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184208983|gb|EDU06026.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188019152|gb|EDU57192.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188998246|gb|EDU67343.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659855|gb|EDX53235.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660321|gb|EDX53582.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198250040|gb|EDY74820.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541600|gb|ACI59829.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378889|gb|EEH01254.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379979|gb|EEH02341.1| 30S ribosomal protein S6 [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 160
Score = 75.4 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++R D+ +Q + ++ ++ EV+ N G++ +AY I K + AY
Sbjct: 1 MAKYEIMLVVRGDLDQEQANKVANELKATLKNT--EVKENNYEGVQQLAYEINKLKTAYR 58
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLTIQRHDRDDRN 113
N + + I+E +R I++NVLR + + ++ + T+ ++ R+++
Sbjct: 59 YVYNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNAKKVQRNEKR 113
>gi|11467411|ref|NP_043268.1| ribosomal protein S6 [Cyanophora paradoxa]
gi|1350896|sp|P48134|RR6_CYAPA RecName: Full=30S ribosomal protein S6, cyanelle
gi|1016212|gb|AAA81299.1| ribosomal protein S6 [Cyanophora paradoxa]
Length = 104
Score = 75.4 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y ++L+ ++ ++I I YQ L+ +NG E ++ G +AY I K Y +
Sbjct: 15 YRTTYILKPSLTEEEITKEIEDYQKLLIDNGAEDIIIENTGKCRLAYLINKQNDGIYFQI 74
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ ++R+MR+ N LR T V
Sbjct: 75 TYRGANTLVNILQRRMRLSINTLRYQTFKV 104
>gi|12044942|ref|NP_072752.1| 30S ribosomal protein S6 [Mycoplasma genitalium G37]
gi|255660111|ref|ZP_05405520.1| 30S ribosomal protein S6 [Mycoplasma genitalium G37]
gi|1351004|sp|P47336|RS6_MYCGE RecName: Full=30S ribosomal protein S6
gi|3844677|gb|AAC71308.1| ribosomal protein S6 [Mycoplasma genitalium G37]
gi|166078987|gb|ABY79605.1| ribosomal protein S6 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 208
Score = 75.4 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
Y + L+ +S +Q ++Q L+++ LG++ +AY I+K A+Y
Sbjct: 2 HYNIILLVDGTLSLEQANQVEQKHQKLLEK--ATEFKSEYLGLKELAYPIKKQLSAHYYR 59
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ E KR I++ ++R L + +
Sbjct: 60 WSFHGESNCTKEFKRAANINKQIIRELIINREK 92
>gi|13358118|ref|NP_078392.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971291|ref|ZP_02553568.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168281887|ref|ZP_02689554.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308036|ref|ZP_02690711.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762224|ref|YP_001752638.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|13959537|sp|Q9PPT6|RS6_UREPA RecName: Full=30S ribosomal protein S6
gi|189045593|sp|B1AJJ4|RS6_UREP2 RecName: Full=30S ribosomal protein S6
gi|11357046|pir||C82875 ribosomal protein S6 UU554 [imported] - Ureaplasma urealyticum
gi|6899560|gb|AAF30967.1|AE002154_3 ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827801|gb|ACA33063.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902615|gb|EDT48904.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675944|gb|EDT87849.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186701168|gb|EDU19450.1| 30S ribosomal protein S6 [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 160
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++R D+ +Q + ++ ++ EV+ N G++ +AY I K + AY
Sbjct: 1 MAKYEIMLVVRGDLDQEQANKVANELKATLKNT--EVKENNYDGVQQLAYEINKLKTAYR 58
Query: 61 VFMNIA-SPPAAIHEMKRKMRIDENVLRSLTLLVDS-HEQSPTLTIQRHDRDDRNDRFPR 118
N + + I+E +R I++NVLR + + ++ + T+ ++ R+++
Sbjct: 59 YVYNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNTKKVQRNEKRAEVYA 118
Query: 119 DRNVDRKQHVSEEKPL 134
+ + ++ E +
Sbjct: 119 RQKEEAERRAVERQAA 134
>gi|87306411|ref|ZP_01088558.1| probable ribosomal protein S6 [Blastopirellula marina DSM 3645]
gi|87290590|gb|EAQ82477.1| probable ribosomal protein S6 [Blastopirellula marina DSM 3645]
Length = 142
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+YE +F+L + + GQ Q +++ GGE+ + + +AY I +RK Y
Sbjct: 4 NVYEGLFILDSNRYGRDPGGVAGQIQEHVEKLGGEILVSRMWIEQRLAYPINGHRKGTYW 63
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ ++ + I++N LR + + D
Sbjct: 64 LAYFRLESTKLTDLTYQCNINDNFLRFMFVKHD 96
>gi|332298065|ref|YP_004439987.1| 30S ribosomal protein S6 [Treponema brennaborense DSM 12168]
gi|332181168|gb|AEE16856.1| 30S ribosomal protein S6 [Treponema brennaborense DSM 12168]
Length = 93
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + K + ++ + E G E+ G R + Y ++K + +
Sbjct: 1 MRKYELMTIF-PT-EEDKYKTGLDAVRATLGEFGVEIEKEEPYGDRDLCYEVKKQNRGRF 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + I + PA I E+ R+ +++ N+L+ + + +D
Sbjct: 59 LLLIIKANPAKIVEVDRQFKLNTNLLKFMFVKIDE 93
>gi|315186487|gb|EFU20247.1| ribosomal protein S6 [Spirochaeta thermophila DSM 6578]
Length = 105
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 2 KLYEHVFLLR--QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
+ YE V + R Q++ +Q + T+ ++ ++ +++ ++G R +AY+I+K + +
Sbjct: 13 RTYELVCVFRSEQELYTQGKQKTVE----VLNKHETQIQKEEDMGERQLAYQIKKQTRGH 68
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + P I +++ ++ VLR L VD
Sbjct: 69 YYVWVFNAKPEIISKLEHDLKYIPEVLRFLVTRVD 103
>gi|269114886|ref|YP_003302649.1| 30S ribosomal protein S6 [Mycoplasma hominis]
gi|268322511|emb|CAX37246.1| 30S ribosomal protein S6 [Mycoplasma hominis ATCC 23114]
Length = 146
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + L + +++++ + S++ +N + + AY I+K Y
Sbjct: 1 MSNYEIMILTNPKTTDEELQNLV---FSVLDKNSSKFERLE---RNETAYPIKKLTHVNY 54
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ-SPTLTIQRHDRD---DRNDRF 116
+ + P + E+ RK+ ID++VLRSL + +DS + P ++ ++ +R ++
Sbjct: 55 FLITTKAEPHLMSELTRKLNIDKSVLRSLIINLDSEKGLKPRKVSKKFNKRIPLNRENKK 114
Query: 117 PRDRNVDRKQHVSEEKPLS 135
P +N + + SEEK ++
Sbjct: 115 PYVKNNETSKDASEEKKVA 133
>gi|115456525|ref|NP_001051863.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|41469637|gb|AAS07360.1| putative plastid ribosomal protein S6 precursor [Oryza sativa
Japonica Group]
gi|108712038|gb|ABF99833.1| ribosomal protein S6 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550334|dbj|BAF13777.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|215692368|dbj|BAG87788.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704476|dbj|BAG93910.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 112 RQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 171
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 172 PSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRK 215
>gi|125588601|gb|EAZ29265.1| hypothetical protein OsJ_13329 [Oryza sativa Japonica Group]
Length = 215
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 108 RQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 167
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 168 PSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRK 211
>gi|125546402|gb|EAY92541.1| hypothetical protein OsI_14280 [Oryza sativa Indica Group]
Length = 215
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 108 RQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 167
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + + P ++ ++ ++ D++V+RS + V
Sbjct: 168 PSTYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRK 211
>gi|293331817|ref|NP_001168663.1| hypothetical protein LOC100382451 [Zea mays]
gi|223950019|gb|ACN29093.1| unknown [Zea mays]
Length = 222
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 115 RQYETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 174
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y+ + + P ++ ++ K+ D++V+RS + V
Sbjct: 175 PSTYYDGIYLLITYFTKPESMDALQLKLNADDDVIRSTSFKV 216
>gi|58698589|ref|ZP_00373487.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534885|gb|EAL58986.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 198
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
Q + I+ +G + G+ AY K + +Y M I+S + + E R
Sbjct: 105 QSSKALEMLLKNIEASG--LIKYEHWGLLDFAYHTNKMKSGHYCIMCISSTASILDEFVR 162
Query: 78 KMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+M+++ENV+R + VD + + + + +
Sbjct: 163 RMKLNENVIRHFPVQVDKIFEGKSYMMNKQIEE 195
>gi|159489677|ref|XP_001702823.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
gi|158271040|gb|EDO96868.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
Length = 122
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAY----RIRKNR 56
M LYE + L + + ++ I L+ NGG V + G + +AY K
Sbjct: 1 MPLYELLMLAKPSLPRAEMVALIKGLGDLVYRNGGFVTSLKSFGDQHLAYDLRRPFEKYD 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+A+ M+ S AI + + ++ VLR + +
Sbjct: 61 RAHIWQMDFVSSVDAIKPLDHGLHVNNTVLRWVLVKR 97
>gi|221054932|ref|XP_002258605.1| 30s ribosomal protein s6-like protein [Plasmodium knowlesi strain
H]
gi|193808674|emb|CAQ39377.1| 30s ribosomal protein s6-like protein, putative [Plasmodium
knowlesi strain H]
Length = 247
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ Y L + + +IK I +Y ++ GE LG R + I+K +AYYV
Sbjct: 125 RSYNIDLLFSCNYTISEIKKKIAEYMYELKLVDGENFKAVYLGKRRLVRPIKKQMEAYYV 184
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHD 108
+ P+ I E+KRK+ + + VLR + + S L Q ++
Sbjct: 185 LFSFEMYPSLILEIKRKLSLQDAVLRFMVNKNEK--TSKNLQYQENE 229
>gi|225630394|ref|YP_002727185.1| ribosomal protein S6 [Wolbachia sp. wRi]
gi|225592375|gb|ACN95394.1| ribosomal protein S6 [Wolbachia sp. wRi]
Length = 257
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
Q + I+ +G + G+ AY K + +Y M I+S + + E R
Sbjct: 164 QSSKALEMLLKNIEASG--LIKYEHWGLLDFAYHTNKMKSGHYCIMCISSTASILDEFVR 221
Query: 78 KMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+M+++ENV+R + VD + + + + +
Sbjct: 222 RMKLNENVIRHFPVQVDKIFEGKSYMMNKQIEE 254
>gi|11465520|ref|NP_045089.1| ribosomal protein S6 [Cyanidium caldarium]
gi|3122758|sp|O19917|RR6_CYACA RecName: Full=30S ribosomal protein S6, chloroplastic
gi|2465743|gb|AAB82672.1| unknown [Cyanidium caldarium]
Length = 103
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 44/91 (48%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + ++R D+ ++ + + + + N ++ G R +AY +RK + Y+
Sbjct: 13 QYEIMLIMRPDLPEEKFLKFLSEIKEHAKRNLALEFNLSNRGRRKLAYAMRKFQDGIYIQ 72
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
N ++ + ++++++E++LR +
Sbjct: 73 FNFLGSGYILNSLIKRLKLEESILRYIVQKT 103
>gi|225677180|ref|ZP_03788176.1| ribosomal protein S6 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590767|gb|EEH11998.1| ribosomal protein S6 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 121
Score = 72.7 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 17 QQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMK 76
Q + I+ +G + G+ AY K + +Y M I+S + + E
Sbjct: 27 AQSSKALEMLLKNIEASG--LIKYEHWGLLDFAYHKNKMKSGHYCIMCISSTASILDEFM 84
Query: 77 RKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
R+M+++ENV+R + VD + + + + +
Sbjct: 85 RRMKLNENVIRHFPVQVDKIFEGKSHMMNKQIEE 118
>gi|168704117|ref|ZP_02736394.1| probable ribosomal protein S6 [Gemmata obscuriglobus UQM 2246]
Length = 182
Score = 72.7 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELG-MRTIAYRIRKNRKAYYVF 62
YE +FLL S + Q +LI+ +GG + + +AY I K++K +
Sbjct: 23 YETLFLLDPTKVSSDAEGVKQQLHTLIERHGGTIEVSRPWDYNHKLAYPIGKSKKGSFHI 82
Query: 63 MNIASPPAAIHEMKRKMRIDEN-VLRSLTLLVDSHEQSPTLTIQRHDR 109
+ ++ ++ E +LR LT +D ++ + + D+
Sbjct: 83 IYYTFESTKQANLENDFKLQEGLILRQLTSKIDPKWRAEMMKVAHEDQ 130
>gi|326531910|dbj|BAK01331.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 72.7 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 98 RQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 157
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P ++ ++ K+ D++V+RS + V
Sbjct: 158 PFTYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKVRK 201
>gi|326524554|dbj|BAK00660.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 72.7 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------- 54
+ YE + +LR D+S ++ I +Y+ L+ G V G+ +AY IRK
Sbjct: 98 RQYETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGL 157
Query: 55 ---NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P ++ ++ K+ D++V+RS + V
Sbjct: 158 PFTYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKVRK 201
>gi|15639057|ref|NP_218503.1| 30S ribosomal protein S6 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025297|ref|YP_001933069.1| 30S ribosomal protein S6 [Treponema pallidum subsp. pallidum
SS14]
gi|6094191|sp|O83102|RS6_TREPA RecName: Full=30S ribosomal protein S6
gi|226703877|sp|B2S211|RS6_TREPS RecName: Full=30S ribosomal protein S6
gi|3322321|gb|AAC65058.1| ribosomal protein S6 (rpsF) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017872|gb|ACD70490.1| ribosomal protein S6 [Treponema pallidum subsp. pallidum SS14]
Length = 93
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 1 MKLYEHV--FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
M+ YE + F +D+ Q ++L+QEN + + +G R +AY ++K ++
Sbjct: 1 MRTYELMAVFSAHEDLFLQGSTA----VRALLQENDAVIAREDHIGERELAYPLKKQKRG 56
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P + E+ K+R+ ++L L + VDS
Sbjct: 57 RYLLFIVQCEPGKVRELDHKLRLRHDLLTHLFVRVDS 93
>gi|296122872|ref|YP_003630650.1| ribosomal protein S6 [Planctomyces limnophilus DSM 3776]
gi|296015212|gb|ADG68451.1| ribosomal protein S6 [Planctomyces limnophilus DSM 3776]
Length = 140
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 12/131 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +FLL + + + ++ G V + Y I+ +RK Y
Sbjct: 6 YEGMFLLDSNRYAADPEAATASVMGMLDRCGATVVAHRPWQENKLTYPIKGHRKGLYYLA 65
Query: 64 NIASPPAAIHEMKRKMRIDENVLRSLTLL-----VDSHEQSPT---LTIQRHDRDD---- 111
+ + E+ R +++E VLR + + D+ + + R D
Sbjct: 66 CFKMDGSKVDELTRLGKLNETVLRQMVINHPQVVFDAMVDALSHDGAIHSPEQRQDPMGM 125
Query: 112 RNDRFPRDRNV 122
R+D PR
Sbjct: 126 RDDMGPRGEKP 136
>gi|302786646|ref|XP_002975094.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
gi|302814601|ref|XP_002988984.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300143321|gb|EFJ10013.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300157253|gb|EFJ23879.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
Length = 112
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNR------- 56
YE + +LR DI+ +Q +Y+ +I GG + G+ +AY I K
Sbjct: 13 YETMAVLRPDITEEQRLALSQRYEEMIIAGGGMDVEIFNRGIMPLAYGILKKNTRGEKNT 72
Query: 57 --KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ A+ P ++ E++RK+ D++++R T +
Sbjct: 73 YVDGIFYMFTFATKPGSVKELQRKLETDDDIIRVTTFKIK 112
>gi|42410359|gb|AAS14469.1| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 120
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
Q + I+ +G + G+ AY K + +Y M I+S + + E R
Sbjct: 27 QSSKALEMLLKNIEASG--LIKYEHWGLLDFAYHKNKMKSGHYCIMCISSTASILDEFMR 84
Query: 78 KMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+M+++ENV+R + VD + + + + +
Sbjct: 85 RMKLNENVIRHFPVQVDKIFEGKSHMMNKQIEE 117
>gi|13507967|ref|NP_109916.1| 30S ribosomal protein S6 [Mycoplasma pneumoniae M129]
gi|2500412|sp|P75543|RS6_MYCPN RecName: Full=30S ribosomal protein S6
gi|1674305|gb|AAB96251.1| ribosomal protein S6 [Mycoplasma pneumoniae M129]
gi|301633349|gb|ADK86903.1| ribosomal protein S6 [Mycoplasma pneumoniae FH]
Length = 215
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
Y + L+ +S +Q + Q + G LG++ +AY I+K A+Y
Sbjct: 2 QYNIILLVDGSLSLEQANQVNEKQQQTLTNVEG--LQTEYLGLKELAYPIKKQLSAHYYR 59
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--------HEQSPTLTIQRHDRDDR-- 112
+ + + KR I++ VLR L + ++ + + L +Q+ + D
Sbjct: 60 WKFSGDNQSTKDFKRTANINKQVLRELIINLEREYGYLASINPKKQQLALQKRAKYDEII 119
Query: 113 -NDRFPRDRNVDRKQHVSEEKP 133
+ P + +V ++ +P
Sbjct: 120 ARENNPENPDVPVTSGLASTQP 141
>gi|116327956|ref|YP_797676.1| 30S ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330837|ref|YP_800555.1| 30S ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281409|sp|Q04TH3|RS6_LEPBJ RecName: Full=30S ribosomal protein S6
gi|122284252|sp|Q052K2|RS6_LEPBL RecName: Full=30S ribosomal protein S6
gi|116120700|gb|ABJ78743.1| 30S Ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124526|gb|ABJ75797.1| 30S Ribosomal protein S6 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 91
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + R +SS+++ + Q + + V + G R + + I+ + +
Sbjct: 1 MRNYELTTITR--VSSREVTK--SEVQDTLNKFSVSVTADEDWGQRKLWHPIKHEEQGIF 56
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
++ P+AI +++++ I++N+LRS+ + +D
Sbjct: 57 HHYKCSAEPSAIEKVEKEFLINQNILRSMVVRLD 90
>gi|99034687|ref|ZP_01314627.1| hypothetical protein Wendoof_01000558 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|161378181|ref|NP_966535.2| ribosomal protein S6 family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 257
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
Q + I+ +G + G+ AY K + +Y M I+S + + E R
Sbjct: 164 QSSKALEMLLKNIEASG--LIKYEHWGLLDFAYHKNKMKSGHYCIMCISSTASILDEFMR 221
Query: 78 KMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRD 110
+M+++ENV+R + VD + + + + +
Sbjct: 222 RMKLNENVIRHFPVQVDKIFEGKSHMMNKQIEE 254
>gi|320537664|ref|ZP_08037597.1| ribosomal protein S6 [Treponema phagedenis F0421]
gi|320145505|gb|EFW37188.1| ribosomal protein S6 [Treponema phagedenis F0421]
Length = 103
Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + +Q K I +S++ ++ G R +AY I+K +KA Y
Sbjct: 11 MRKYELMTVF--PVEEEQFKQGIEALRSVLGSFDVQIESEEPFGDRDLAYEIKKKKKAKY 68
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
V I + P I + ++ ++++N+L L + +D
Sbjct: 69 VLFTIQAGPEKILAIDKQFKLNQNLLTYLFIRIDE 103
>gi|24214375|ref|NP_711856.1| 30S ribosomal protein S6 [Leptospira interrogans serovar Lai str.
56601]
gi|45657961|ref|YP_002047.1| 30S ribosomal protein S6 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|32171560|sp|Q8F5K6|RS6_LEPIN RecName: Full=30S ribosomal protein S6
gi|61215620|sp|Q72QK0|RS6_LEPIC RecName: Full=30S ribosomal protein S6
gi|24195310|gb|AAN48874.1| 30S ribosomal protein S6 [Leptospira interrogans serovar Lai str.
56601]
gi|45601202|gb|AAS70684.1| 30S ribosomal protein S6 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 91
Score = 70.0 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + R +SS+++ + Q ++++ V + G R + + I+ + +
Sbjct: 1 MRNYELTTITR--VSSREVAK--SEIQETLKKHSVSVTAEEDWGQRKLWHPIKHEEQGIF 56
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ P AI +++++ I++N+LRS+ + +
Sbjct: 57 HHYKCSADPNAIEKVEKEFLINQNILRSMVVRL 89
>gi|149177252|ref|ZP_01855858.1| probable ribosomal protein S6 [Planctomyces maris DSM 8797]
gi|148843966|gb|EDL58323.1| probable ribosomal protein S6 [Planctomyces maris DSM 8797]
Length = 138
Score = 70.0 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 7/138 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +FLL + + TI ++ + G E+ +AY I + K +
Sbjct: 1 MVNYEGMFLLDSGKFAADHEGTIAHLMEILDKAGAEIVAHRPWQDGKLAYEIEGHMKGLH 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-----DSHEQS--PTLTIQRHDRDDRN 113
+ P + + + R + + V+R + + D+ + P+ + + +
Sbjct: 61 YLVYFTMPGSGMDVITRSCHLSDVVIRQMVIKQPQTLFDAMVSAIDPSSAPEAPAEEVKG 120
Query: 114 DRFPRDRNVDRKQHVSEE 131
D EE
Sbjct: 121 QSDDDGPEYDAIDDDDEE 138
>gi|19114340|ref|NP_593428.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces
pombe 972h-]
gi|74625918|sp|Q9UT82|RT06_SCHPO RecName: Full=37S ribosomal protein MRP17, mitochondrial
gi|5706509|emb|CAB52271.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces
pombe]
Length = 109
Score = 70.0 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 4 YEHVFLLRQD-----ISSQQIKDTIGQYQS-LIQENGGEVRLVNELGMRTIAYRIRKNRK 57
YE + R SS + I + I +N G V V +G++ +A I+K +
Sbjct: 2 YELFCITRPAANATRTSSPTLAMNIAKNCGRAILDNKGVVVDVESMGLKELAKPIKKLNQ 61
Query: 58 ----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
++ M S P E++R +R++ +VLR + +
Sbjct: 62 SYSFGHWWSMTFYSNPTVQSEIQRILRLEPSVLRYMIVK 100
>gi|168008110|ref|XP_001756750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691988|gb|EDQ78347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI---------RK 54
YE + +LR DI+ +Q +Y+ I GG + GM+ +AY I +
Sbjct: 18 YETMTVLRPDITEEQRLALTQRYEESIIAGGGLDVEMFNRGMQPLAYNIKTKNMAGFANR 77
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P + ++ ++ D++++RS T + +
Sbjct: 78 YLDGIYLLFTYVTKPESQKAIQDRLNRDDDIIRSTTFRLKA 118
>gi|148377542|ref|YP_001256418.1| 30S ribosomal protein S6 [Mycoplasma agalactiae PG2]
gi|226695104|sp|A5IY65|RS6_MYCAP RecName: Full=30S ribosomal protein S6
gi|148291588|emb|CAL58974.1| 30S ribosomal protein S6 [Mycoplasma agalactiae PG2]
Length = 145
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++ I + + ++N +V + T+AY I K+ KA Y
Sbjct: 1 MNKYEIMLIIDPAIDMAMANEIVESVFD--KKNINKVVKLENS---TLAYPINKSSKAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
V + + I E R+ I + + R + + +D
Sbjct: 56 VVYTLEAKSELIAEFTRRANIAKFIWRQMVINLD 89
>gi|75276132|sp|P82403|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal protein S6 precursor [Spinacia oleracea]
Length = 168
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
+ YE + +LR D++ + +Y+ L+ G V G+ +AY I++ K
Sbjct: 63 RQYETMAVLRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGET 122
Query: 58 -----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P +I ++ + D++V+RS + +
Sbjct: 123 NNYLDGIYLLFTYFTKPESISPLEAALVTDDDVIRSSSFKIRK 165
>gi|240047574|ref|YP_002960962.1| 30S ribosomal protein S6 [Mycoplasma conjunctivae HRC/581]
gi|239985146|emb|CAT05156.1| 30S ribosomal protein S6 [Mycoplasma conjunctivae]
Length = 146
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L IK N + + +L +AY I+K++ +
Sbjct: 1 MPKYEIMTILDPKSDISVIKKIADSVFG--SSN---IEKIEKLDKTDLAYEIKKSKTGLF 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ M + S ++E R+ I++ + R L + +D
Sbjct: 56 ILMFVNSEANLVNEFVRRSNIEKAIWRFLIINLD 89
>gi|168062700|ref|XP_001783316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665168|gb|EDQ51861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI---------RK 54
YE + +LR DI+ Q +Y+ I GG + GM+ +AY I +
Sbjct: 18 YETMTVLRPDITEDQRLALTQRYEEAIIAGGGLDVEMFNRGMQPLAYNIKTKNMAGFANR 77
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P + ++ ++ D++++RS T + +
Sbjct: 78 YLDGIYLLFTYVTKPESQKTIQDRLNRDDDIIRSTTFRLKA 118
>gi|299830577|ref|YP_003735025.1| 30S ribosomal protein S6 [Durinskia baltica]
gi|297384941|gb|ADI40240.1| 30S ribosomal protein S6 [Durinskia baltica]
Length = 97
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 42/90 (46%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + LL ++ + ++K + Y +++ V G ++Y I K Y+
Sbjct: 5 RKYEIMILLTEEFNDSELKTWVFNYAKNLRKFNVCDISVISRGKHNLSYPINNCAKGNYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P I+ +++D NV+R L
Sbjct: 65 QLNFSSMPKYINNFSNLLKLDSNVVRFLVF 94
>gi|291320200|ref|YP_003515461.1| 30S ribosomal protein S6 [Mycoplasma agalactiae]
gi|290752532|emb|CBH40504.1| 30S ribosomal protein S6 [Mycoplasma agalactiae]
Length = 145
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++ I + + ++N +V + T+AY I K+ KA Y
Sbjct: 1 MNKYEIMLIIDPAIDMAMANEIVESVFD--KKNINKVVKLENS---TLAYPINKSSKAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + + I E R+ I + + R + + +D
Sbjct: 56 IVYTLEAKSELIAEFTRRANIAKFIWRQMVINLD 89
>gi|159477657|ref|XP_001696925.1| plastid ribosomal protein S6 [Chlamydomonas reinhardtii]
gi|158274837|gb|EDP00617.1| plastid ribosomal protein S6 [Chlamydomonas reinhardtii]
Length = 171
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L+ +S ++ + ++++ + + G +AY I+K + YV
Sbjct: 76 YETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLY 135
Query: 64 NIAS---PPAAIHEM--KRKMRIDENVLRSLTL 91
+ + A+ ++ + ++ VLR +TL
Sbjct: 136 SYLARRQTARAVQQLLSNPEAGAEDTVLRHITL 168
>gi|302853215|ref|XP_002958124.1| plastid/chloroplast ribosomal protein S6 [Volvox carteri f.
nagariensis]
gi|300256592|gb|EFJ40855.1| plastid/chloroplast ribosomal protein S6 [Volvox carteri f.
nagariensis]
Length = 173
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 21/101 (20%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE + +L+ +S ++ + ++++ + + G +AY I+K + YV
Sbjct: 78 YETMMILKPSLSDEERDRELAKFEAYLNKQECYEINALVRGRSKLAYPIKKEWEGIYVLY 137
Query: 64 NIAS-------------PPAAIHEMKRKMRIDENVLRSLTL 91
+ + P A E + VLR +TL
Sbjct: 138 SYVASRQTGRAVQLLLSNPEAGAE--------DTVLRHITL 170
>gi|171910047|ref|ZP_02925517.1| 30S ribosomal protein S6 [Verrucomicrobium spinosum DSM 4136]
Length = 94
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 43/84 (51%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + +L + ++ + Q ++NG ++ V+ LG + Y R YY+
Sbjct: 3 RKYEAMIVLDMKGKEENVETLVSQLGREFEQNGAKLEQVDNLGKKKFPYAPRHVESGYYI 62
Query: 62 FMNIASPPAAIHEMKRKMRIDENV 85
+ + P AI+ ++ K++++EN+
Sbjct: 63 NFHFEAAPEAINGLQTKLKLNENI 86
>gi|296127396|ref|YP_003634648.1| ribosomal protein S6 [Brachyspira murdochii DSM 12563]
gi|296019212|gb|ADG72449.1| ribosomal protein S6 [Brachyspira murdochii DSM 12563]
Length = 115
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ +I+ + ++++Q E+ + G+ ++Y IRK + +
Sbjct: 1 MREYEILFVT--EINDAVHQSAKDHVKTILQNYHAEIFNEADYGIHNLSYPIRKVNQGKF 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + + +++++R + ++LR + + +D
Sbjct: 59 YYYHFRCDGNNLAHIEKELRYELSILRFIIVRLDE 93
>gi|225619961|ref|YP_002721218.1| 30S ribosomal protein S6 [Brachyspira hyodysenteriae WA1]
gi|225214780|gb|ACN83514.1| 30S ribosomal protein S6 [Brachyspira hyodysenteriae WA1]
Length = 116
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +F+ +I+ ++ ++++Q E+ + G+ ++Y IRK + +
Sbjct: 1 MREYEILFVT--EINDAVHQNAKDHVKTILQNYHAEIFNEADYGIHNLSYPIRKVNQGKF 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + ++ +++++R + ++LR + + +D
Sbjct: 59 YYYHFRCDGNSLAGIEKELRYELSILRFIIVRLDE 93
>gi|289619930|emb|CBI53374.1| unnamed protein product [Sordaria macrospora]
Length = 117
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKA 58
LYE + ++R + ++K+ + LI GG +R + G + I +++ +
Sbjct: 2 LYETIGIVRPG-NIAEVKELVLTAGKLILNQGGVIRDIKNWGTFLLPRPISTNQQRHTRG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M S A E++R MR D V+R+ + +
Sbjct: 61 HYFVMRYDSSIATHEEVRRTMRADPRVIRTANVKL 95
>gi|85109410|ref|XP_962903.1| hypothetical protein NCU05717 [Neurospora crassa OR74A]
gi|28924546|gb|EAA33667.1| predicted protein [Neurospora crassa OR74A]
Length = 117
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKA 58
LYE + ++R + ++K+ + LI GG +R + G + I +++ +
Sbjct: 2 LYETIGIVRPG-NIAEVKELVLTAGKLILNQGGVIRDIKNWGTFLLPRPISTNQQRHNRG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M + A E++R M+ D V+R+ + +
Sbjct: 61 HYFVMRYDASIATHEEVRRTMKADPRVIRTANVKL 95
>gi|213581294|ref|ZP_03363120.1| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 45
Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMR 46
M+ YE VF++ D S+Q+ I +Y + I G++ + + G R
Sbjct: 1 MRHYEIVFMVHPD-QSEQVPGMIERYSAAITGAEGKIHRLEDWGRR 45
>gi|28476115|gb|AAO44205.1| 30S ribosomal protein S6 [Tropheryma whipplei str. Twist]
Length = 153
Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + L + + + + + ++ G V+ ++ LG+R AY I+ V
Sbjct: 60 REYELLVSLGSEFEPEA-ESRVRSLFTPVEPEGVTVKHLDVLGIRKFAYEIKGRNDGVCV 118
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + +I E+ R+MR+ E+V+R+ L V
Sbjct: 119 VVRFLANAGSIAEIGRQMRLTEDVIRTKLLRV 150
>gi|187735967|ref|YP_001878079.1| ribosomal protein S6 [Akkermansia muciniphila ATCC BAA-835]
gi|226703413|sp|B2UL25|RS6_AKKM8 RecName: Full=30S ribosomal protein S6
gi|187426019|gb|ACD05298.1| ribosomal protein S6 [Akkermansia muciniphila ATCC BAA-835]
Length = 94
Score = 67.7 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 38/85 (44%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + + + +++ I + ++E G ++ G R AY Y
Sbjct: 1 MRNYEALIVFNMKGTETPVEELISTVAAAMKEEGADITATENAGRREFAYESNHLSAGQY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENV 85
V ++ P+AI ++ ++R++ +
Sbjct: 61 VTYTFSAEPSAIRPIRERLRLNPQI 85
>gi|31544819|ref|NP_853397.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(low)]
gi|61215679|sp|Q7NAM1|RS6_MYCGA RecName: Full=30S ribosomal protein S6
gi|31541665|gb|AAP56965.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(low)]
gi|284930893|gb|ADC30832.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. R(high)]
gi|284931649|gb|ADC31587.1| 30S ribosomal protein S6 [Mycoplasma gallisepticum str. F]
Length = 191
Score = 67.3 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++ ++ Q + + +++ G LG +T+ Y I+K A+Y
Sbjct: 1 MAKYEIMLMVSGQLNQNQAQAVNDELKAVF---GKTEITEEYLGQKTLEYPIKKEVTAHY 57
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ + S ++HE KR I +VLR L L +
Sbjct: 58 FNLFLTSDGKSVHEYKRLASIRTDVLRILILNTEKE 93
>gi|72080634|ref|YP_287692.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae 7448]
gi|91207920|sp|Q4A870|RS6_MYCH7 RecName: Full=30S ribosomal protein S6
gi|71913758|gb|AAZ53669.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae 7448]
Length = 241
Score = 67.3 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L I + + +++ +N E E +AY IRK++ A Y
Sbjct: 1 MPKYEIMTILDPKAEMAIIDNLL---KTVFGDNSTEKLRKLE--TTNLAYPIRKSKIAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---QSPTLTIQRHDRDDRNDR-- 115
+ + +P I E R+ I + R L + +DS + + P + + R DR
Sbjct: 56 FLVELNAPTNLIEEFVRRANITREIWRYLIVNLDSEKGLNKKPKIRERNRKYTPRRDRFD 115
Query: 116 FPRDRNVDRKQHVSEEK 132
P R + + +++
Sbjct: 116 KPNFRGNPKSRFDQQDQ 132
>gi|312601292|gb|ADQ90547.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae 168]
Length = 241
Score = 67.3 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L I + + +++ +N E E +AY IRK++ A Y
Sbjct: 1 MPKYEIMTILDPKAEMAIIDNLL---KTVFGDNSTEKLRKLE--TTNLAYPIRKSKIAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDR 120
+ + +P I E R+ I + R L + +DS + L + R+ PR
Sbjct: 56 FLVELNAPTNLIEEFVRRANITREIWRYLIVNLDSEKG---LNKKPKIRERNRKYTPRRD 112
Query: 121 NVDRK 125
D+
Sbjct: 113 RFDKP 117
>gi|54020446|ref|YP_115819.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae 232]
gi|81378667|sp|Q600Z6|RS6_MYCH2 RecName: Full=30S ribosomal protein S6
gi|53987619|gb|AAV27820.1| 30s ribosomal protein S6 [Mycoplasma hyopneumoniae 232]
Length = 241
Score = 67.3 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L I + + +++ +N E E +AY IRK++ A Y
Sbjct: 1 MPKYEIMTILDPKAEMAIIDNLL---KTVFGDNSTEKLRKLE--TTNLAYPIRKSKIAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---QSPTLTIQRHDRDDRNDR-- 115
+++ +P I E R+ I + R L + +DS + + P + + R DR
Sbjct: 56 FLVDLNAPTNLIEEFVRRANITREIWRYLIVNLDSEKGLNKKPKIRERNRKYTPRRDRFE 115
Query: 116 FPRDRNVDRKQHVSEEK 132
P R + + +++
Sbjct: 116 KPNFRGNPKSRFDQQDQ 132
>gi|223936331|ref|ZP_03628243.1| ribosomal protein S6 [bacterium Ellin514]
gi|223894849|gb|EEF61298.1| ribosomal protein S6 [bacterium Ellin514]
Length = 103
Score = 67.3 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-NRKAY 59
MK YE +F+L + +K+TI Q I GG V V ++ R A K N +
Sbjct: 1 MKRYEGLFILNTAGKEESLKETIDQLSDEINAAGGRVETVQKMDKRNFARVADKRNSSGF 60
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSL 89
YV + P+AI +++ + ++ +V R +
Sbjct: 61 YVNVIFECKPSAITQLQTRFALNADVYRVM 90
>gi|291059479|gb|ADD72214.1| ribosomal protein S6 [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 87
Score = 67.0 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 26 YQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
++L+QEN + + +G R +AY ++K ++ Y+ + P + E+ K+R+ ++
Sbjct: 18 VRALLQENDAVIAREDHIGERELAYPLKKQKRGRYLLFIVQCEPGKVRELDHKLRLRHDL 77
Query: 86 LRSLTLLVDS 95
L L + VDS
Sbjct: 78 LTHLFVRVDS 87
>gi|330850852|ref|YP_004376602.1| ribosomal protein S6 [Fistulifera sp. JPCC DA0580]
gi|328835672|dbj|BAK18968.1| ribosomal protein S6 [Fistulifera sp. JPCC DA0580]
Length = 98
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + LL ++ + ++K + Y +++ V G +AY I + K Y+
Sbjct: 5 RKYEIMILLTEEFNDSELKTWVFNYAKNLRKFSVCDISVISRGKHNLAYAIDEKLKGNYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N +S P I + + +++D NVLR L +
Sbjct: 65 QLNFSSMPKYIEDFSQILKLDSNVLRFLVFKKE 97
>gi|115489096|ref|NP_001067035.1| Os12g0563200 [Oryza sativa Japonica Group]
gi|113649542|dbj|BAF30054.1| Os12g0563200 [Oryza sativa Japonica Group]
Length = 152
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 39 LVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+N G+R +AY+I+K R A Y+ MN I++ K + DE ++R L + D
Sbjct: 1 RLNNWGLRRLAYKIKKARHANYILMNFEIQAKYINDFKTLLDKDERIIRHLVMKRDEAIT 60
Query: 99 S 99
Sbjct: 61 E 61
>gi|11467439|ref|NP_043585.1| ribosomal protein S6 [Odontella sinensis]
gi|1350897|sp|P49494|RR6_ODOSI RecName: Full=30S ribosomal protein S6, chloroplastic
gi|1185134|emb|CAA91617.1| 30S ribosomal protein S6 [Odontella sinensis]
Length = 96
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE + LL ++ + ++K Y +++ V G R ++Y I +K ++
Sbjct: 5 KKYEMMILLTEEFNDSELKTWAFNYAKALRKLSASEISVISRGKRDLSYYINNQKKGNFI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P + + ++ D NVLR L L
Sbjct: 65 QINFSSMPKYVDNFSKNLKFDSNVLRFLIL 94
>gi|183221482|ref|YP_001839478.1| 30S ribosomal protein S6 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911569|ref|YP_001963124.1| 30S ribosomal protein S6 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|226703482|sp|B0SB40|RS6_LEPBA RecName: Full=30S ribosomal protein S6
gi|226703483|sp|B0SSW2|RS6_LEPBP RecName: Full=30S ribosomal protein S6
gi|167776245|gb|ABZ94546.1| 30S Ribosomal protein S6 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779904|gb|ABZ98202.1| 30S ribosomal protein S6 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 91
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE +LR +++T + L+ + ++ + G + + + + ++ + ++
Sbjct: 1 MRNYEITNILR----EGNVEETKSAVKELLSKYNFTIQGEEDWGSKRLWHPVGQDEQGHF 56
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + P + +++ + +++ N+L++L +
Sbjct: 57 TLIKCSGSPTEVAKIEHEFKLNVNILKTLVIR 88
>gi|304373313|ref|YP_003856522.1| 30S ribosomal protein S6 [Mycoplasma hyorhinis HUB-1]
gi|304309504|gb|ADM21984.1| 30S ribosomal protein S6 [Mycoplasma hyorhinis HUB-1]
Length = 182
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L + I+D + +S+ + + +L +AY I+K+++ +
Sbjct: 1 MSKYEIMTVLAPGTDLKVIEDVL---KSVFDAKN--IEKIEKLERTELAYEIKKHKQGIF 55
Query: 61 VFMNIASPPAAIHEMKRKMRI-DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRD 119
V N+ S + I E R++ I + VLR L + +DS E+ T + D +
Sbjct: 56 VLANLKSEESLIEEFVRRVNILKKQVLRFLVINLDS-ERGMHKTFRPRKNDKHKFFSSKK 114
Query: 120 RNVDRKQHVSEEKP 133
++ S +KP
Sbjct: 115 PTTSTEEGKSFQKP 128
>gi|167948934|ref|ZP_02536008.1| 30S ribosomal protein S6 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 45
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
+F++ D S+Q+ I +Y+S I+ G + + + G R +AY
Sbjct: 1 MFMVHPD-QSEQVPAMIERYRSTIESKSGTIHRLEDWGRRQLAYP 44
>gi|118411090|ref|YP_874485.1| 30S ribosomal protein S6 [Phaeodactylum tricornutum]
gi|125987757|sp|A0T0L0|RR6_PHATC RecName: Full=30S ribosomal protein S6, chloroplastic
gi|116739837|gb|ABK20708.1| 30S ribosomal protein S6 [Phaeodactylum tricornutum]
Length = 98
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + LL ++ + ++K + Y +++ V G +AY I K Y+
Sbjct: 5 RKYEIMILLTEEFNDSELKTWVFNYAKNLRKFSVCDISVISRGKHNLAYPIETKMKGNYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+N +S P I + +++D NVLR L
Sbjct: 65 QLNFSSMPKYITNFSKTLKMDSNVLRFLVF 94
>gi|293363226|ref|ZP_06610110.1| ribosomal protein S6 [Mycoplasma alligatoris A21JP2]
gi|292553085|gb|EFF41834.1| ribosomal protein S6 [Mycoplasma alligatoris A21JP2]
Length = 166
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE V +L + + G V+ +L +AY I K++ A++
Sbjct: 1 MAKYEIVLILDPKAEETVATKLLNEV------FGKGVKKAQKLEKTELAYEINKSKHAHF 54
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH---------EQSPTLTIQRH--DR 109
+ + I E RK I + V R+L + +DS + +P T + +R
Sbjct: 55 FLAEVEAQTELIAEFTRKANILKTVWRNLVVNLDSEKGLNVSKNKKPAPRKTFAKSYTNR 114
Query: 110 DDRNDRFPRDRNVDRKQHVSE 130
+DR+++ Q SE
Sbjct: 115 EDRSEKREYTPRSKTTQEGSE 135
>gi|313678626|ref|YP_004056366.1| 30S ribosomal protein S6 [Mycoplasma bovis PG45]
gi|312950617|gb|ADR25212.1| ribosomal protein S6 [Mycoplasma bovis PG45]
Length = 145
Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + ++ I + + ++N + + T+AY I K+ KA Y
Sbjct: 1 MNKYEIMLIVDPAIDIAMANEIVESVFD--KKNINKAVKLEN---TTLAYPINKSTKAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + + I E R+ I + + R + + +D
Sbjct: 56 IVYTLEAKSELIAEFTRRANIAKFIWRQMVINLD 89
>gi|261338770|ref|ZP_05966654.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
gi|270276175|gb|EFA22029.1| ribosomal protein S6 [Bifidobacterium gallicum DSM 20093]
Length = 54
Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 44 GMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
G + +AY I ++ YY ++ + I E +R++RI + +LR + + +
Sbjct: 3 GEKKLAYEINYIKEGYYYIVDFKASGDHIKEFERRLRISDLILRFMVIRKE 53
>gi|308189826|ref|YP_003922757.1| 30S ribosomal protein S6 [Mycoplasma fermentans JER]
gi|238809824|dbj|BAH69614.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|307624568|gb|ADN68873.1| 30S ribosomal protein S6 [Mycoplasma fermentans JER]
Length = 157
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L K +I +S+ +++ V+ +L +AY I+ + KA Y
Sbjct: 1 MHKYEIMMILDPK---ADAKKSIDLVESIFKKSN--VKKAEKLERTDLAYPIKGSLKAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH--DRDDRNDRFPR 118
+ I + I E+ R++ I +++ R L + +DS + + H +++ +
Sbjct: 56 LLFEIEAESHLIAELTRRVNISKDIWRHLAINLDSERGYGKVKKESHRAKYEEKKEFKKS 115
Query: 119 DRNVDRKQHVSEEKPL 134
+++ + + V+EEK
Sbjct: 116 NKSAEAGEKVAEEKAA 131
>gi|71842305|ref|YP_277393.1| ribosomal protein S6 [Emiliania huxleyi]
gi|60101548|gb|AAX13892.1| ribosomal protein S6 [Emiliania huxleyi]
Length = 104
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
LYE ++L+ + +++ Y+ + G +V V G R ++Y+I+ A Y+
Sbjct: 7 LYEILYLVDPGFNETELEKKTEFYRDFLTSRGSQVM-VQNRGKRGLSYKIKGCETASYIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
M + + D ++LR LT + +
Sbjct: 66 MIYVGNQKLRTSLDVALGRDVSILRHLTTKIPELPE 101
>gi|161486580|ref|NP_787236.2| 30S ribosomal protein S6 [Tropheryma whipplei str. Twist]
Length = 95
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M+ YE + L + + + + + ++ G V+ ++ LG+R AY I+
Sbjct: 1 MREYELLVSLGSEFEPEA-ESRVRSLFTPVEPEGVTVKHLDVLGIRKFAYEIKGRNDGVC 59
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
V + + +I E+ R+MR+ E+V+R+ L V
Sbjct: 60 VVVRFLANAGSIAEIGRQMRLTEDVIRTKLLRV 92
>gi|319777041|ref|YP_004136692.1| putative 30S ribosomal protein s6 [Mycoplasma fermentans M64]
gi|318038116|gb|ADV34315.1| Putative 30S ribosomal protein S6 [Mycoplasma fermentans M64]
Length = 157
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L K +I +S+ +++ V+ +L +AY I+ + KA Y
Sbjct: 1 MHKYEIMMILDPK---ADAKKSIDLVESIFKKSN--VKKAEKLERTDLAYPIKGSLKAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ I + I E+ R++ I +++ R L + +DS
Sbjct: 56 LLFEIEAESHLIAELTRRVNISKDIWRHLAINLDSE 91
>gi|325110025|ref|YP_004271093.1| hypothetical protein Plabr_3474 [Planctomyces brasiliensis DSM
5305]
gi|324970293|gb|ADY61071.1| hypothetical protein Plabr_3474 [Planctomyces brasiliensis DSM
5305]
Length = 137
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+FLL + + ++++ EV +AY I +RK + +
Sbjct: 1 MFLLDSGKYATDPDGVTAEVNGILEKIEAEVVAARPWMDGKLAYEIDGHRKGLHYLCYVK 60
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTL 91
+ + +++R R+ + VLR L +
Sbjct: 61 ADSLKVQQLQRICRLSDVVLRHLCI 85
>gi|310800520|gb|EFQ35413.1| ribosomal protein S6 [Glomerella graminicola M1.001]
Length = 113
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NRKA 58
LYE + ++R S ++K+ +I NGG +R ++ G+ T+ + K ++
Sbjct: 2 LYELIGIVRPG-SLAEVKEIAFTAGQIILRNGGVIRGISNWGVFTLPRPVSKAQMKHKSG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M + + +M+ + +D V+RS + +
Sbjct: 61 HYFVMRYDASSSTHADMRNTINLDPRVIRSAHVKL 95
>gi|330723812|gb|AEC46182.1| 30S ribosomal protein S6 [Mycoplasma hyorhinis MCLD]
Length = 153
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L + I+D + +S+ + + +L +AY I+K+++ +
Sbjct: 1 MSKYEIMTVLAPGTDLKVIEDVL---KSVFDAKN--IEKIEKLERTELAYEIKKHKQGIF 55
Query: 61 VFMNIASPPAAIHEMKRKMRI-DENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
V N+ S + I E R++ I + VLR L + +DS + + R +ND+
Sbjct: 56 VLANLKSEESLIEEFVRRVNILKKQVLRFLVINLDSERG-----MHKTFRPRKNDK 106
>gi|299830409|ref|YP_003734624.1| ribosomal protein S6 [Kryptoperidinium foliaceum]
gi|297385111|gb|ADI40409.1| ribosomal protein S6 [Kryptoperidinium foliaceum]
Length = 97
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + LL ++ + ++K + Y +++ V G ++Y I K Y+
Sbjct: 5 RKYEIMILLTEEFNDSELKTWVFNYAKNLRKFNVCDISVISRGKHNLSYPINNRGKGNYI 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+N +S P I+ +++D NV+R L +
Sbjct: 65 QLNFSSMPKYINNFSNILKMDSNVVRFLVFNKE 97
>gi|322711285|gb|EFZ02859.1| 37S ribosomal protein Mrp17 [Metarhizium anisopliae ARSEF 23]
Length = 118
Score = 65.0 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 3 LYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNRK 57
LYE + ++R ++ +K+ SL+ NGG VR ++ G+ ++ I K+
Sbjct: 2 LYELIAIVRPGNLGE--VKEIAQTVGSLVLRNGGVVRGLDNWGIFSLPKPISVHQMKHTH 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M S +++ +R++ ++RS + +
Sbjct: 60 GHYFVMRYDSSTKVHQDVRTTLRLEPRMIRSAHVKL 95
>gi|315320561|ref|YP_004072618.1| 30S ribosomal protein S6 [Thalassiosira oceanica CCMP1005]
gi|283569034|gb|ADB27571.1| 30S ribosomal protein S6 [Thalassiosira oceanica CCMP1005]
Length = 103
Score = 65.0 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K+ Y +++ V G R +AY I ++ ++
Sbjct: 6 KYEMMILLTEEFNDNELKNWAFNYAKALRKLNASEISVISRGKRDLAYEISNQKRGNFIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+N +S P E ++ D NVLR L L ++ +S
Sbjct: 66 INFSSIPKHAEEFLSSLKFDINVLRFLILNKTNNVKS 102
>gi|302680691|ref|XP_003030027.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune H4-8]
gi|300103718|gb|EFI95124.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune H4-8]
Length = 125
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M LY+ + + + IK+ + Q + GG VR ++ G R + R+R++R+AY
Sbjct: 1 MPLYQLLCITVHSPEYKHIKELVRQSAQHVMHAGGVVRSIDSWGTRMLPQRMRRHRQAYN 60
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
Y ++ + P + + MR D V+R L + + ++
Sbjct: 61 YGDYWTLHFDTAPRTLRSLNGIMRQDPRVIRWSVLKLAERPEELATEGKK 110
>gi|124810148|ref|XP_001348780.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
gi|23497680|gb|AAN37219.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
Length = 120
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-----N 55
M LYE L + I +++ + + +I ++ G + +N+LG R A+ I+K
Sbjct: 1 MVLYESYISLNKHIKKDDVRNLMKNFNYIINKHNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + S +I ++ + VLR L + +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTYVLRFLNMKMK 99
>gi|221059165|ref|XP_002260228.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810301|emb|CAQ41495.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 114
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-----N 55
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + S +I ++ + +LR L + +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTFILRFLNVKMK 99
>gi|156100043|ref|XP_001615749.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148804623|gb|EDL46022.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 114
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-----N 55
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + S +I ++ + +LR L + +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTFILRFLNVKMK 99
>gi|325972884|ref|YP_004249948.1| 30S ribosomal protein S6 [Mycoplasma suis str. Illinois]
gi|325989377|ref|YP_004249076.1| 30S ribosomal protein S6 [Mycoplasma suis KI3806]
gi|323574462|emb|CBZ40112.1| 30S ribosomal protein S6 [Mycoplasma suis]
gi|323651486|gb|ADX97568.1| 30S ribosomal protein S6 [Mycoplasma suis str. Illinois]
Length = 141
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE +FLL D S Q + +L +E + + +AY ++K A+
Sbjct: 1 MSKYEIMFLLDADCSQQDAVKEVEPLLNLFKEE--KDYEMTVSWSDQLAYPVQKKTSAHR 58
Query: 61 VFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVD-----SHEQSPTLTIQRHDRDDRND 114
+N ++ + + E KR ++ +LR L + V+ + +P ++ R + +
Sbjct: 59 YLVNFSTEDISKLEEFKRLSSLNNKILRHLIINVEKTYGYKNSINPKKILKAQKRAQKYE 118
Query: 115 RFPRDRNVDRKQHVSEEKPLS 135
F R R + S ++P S
Sbjct: 119 EF-RSRRQSKTNERSPQRPYS 138
>gi|170098324|ref|XP_001880381.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644819|gb|EDR09068.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 123
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M LY+ + + + + I++ + Q I GG VR ++ G RT+ R+++
Sbjct: 1 MPLYQMLCITKHYPEYKHIRELVRQSAMHIMAVGGVVRSIDSWGTRTLPQRMKRQGPYVS 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y ++ + PA + + MR D VLR L +
Sbjct: 61 VGDYWTLHFDTSPATLKTLNGIMRRDPRVLRWTVLKL 97
>gi|196229512|ref|ZP_03128377.1| ribosomal protein S6 [Chthoniobacter flavus Ellin428]
gi|196226744|gb|EDY21249.1| ribosomal protein S6 [Chthoniobacter flavus Ellin428]
Length = 105
Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + +L + KD I + + +++G V V ++ R +Y K YYV
Sbjct: 5 NRYEGLLVLNVQGNEDGAKDVIERLEGEFKKDGATVEQVQKMDRRQFSYTAGKLESGYYV 64
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLR 87
+P A+I ++K + +DE+V R
Sbjct: 65 NFIFNAPAASIDKLKARFTLDEDVYR 90
>gi|145652241|gb|ABP88171.1| hypothetical protein [Borrelia lonestari]
Length = 144
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL R + K + + + + + N G R + Y I+K + Y
Sbjct: 20 KKYEGCFLFRS--EDLEYKVALEEVKKQLAAFNASDIVENSFGERVLEYPIKKQTRGRYE 77
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR-NDRFPRDR 120
M + E + ++++ +++LR + L+ ++ + + +R+ RD+R + +
Sbjct: 78 IMQFKMDSDNLKEFELQLKLIKSLLRYMILIKNNKKVNVKKIRRRNFRDNRERESSASNS 137
Query: 121 NVDRK 125
NVD K
Sbjct: 138 NVDAK 142
>gi|71893643|ref|YP_279089.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae J]
gi|91207921|sp|Q4AA43|RS6_MYCHJ RecName: Full=30S ribosomal protein S6
gi|71851770|gb|AAZ44378.1| 30S ribosomal protein S6 [Mycoplasma hyopneumoniae J]
Length = 241
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M YE + +L I + + +++ +N E E +AY IRK++ A Y
Sbjct: 1 MPKYEIMTILDPKAEMAIIDNLL---KTVFGDNSTEKLRKLE--TTNLAYSIRKSKIAQY 55
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE---QSPTLTIQRHDRDDRNDR-- 115
+++ +P I E R+ I + R L + +DS + + P + + R DR
Sbjct: 56 FLVDLNAPTNLIEEFVRRANITREIWRYLIVNLDSEKGLNKKPKIRERNRKYTLRRDRFD 115
Query: 116 FPRDRNVDRKQHVSEEK 132
P R + + +++
Sbjct: 116 KPNFRGNPKSRFDQQDQ 132
>gi|302891803|ref|XP_003044783.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725708|gb|EEU39070.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 466
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 3 LYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNRK 57
LYE + ++R ++S +K+ SL+ +NGG VR + G+ ++ I K+
Sbjct: 350 LYELIAIVRPGNLSE--VKEIAQTVGSLVLKNGGVVRGLANWGVFSLPKPISVHQMKHTH 407
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+Y M + +++ +R++ ++R
Sbjct: 408 GHYFVMRYDAASKVHQDVRNTLRLEPRMIR 437
>gi|168017341|ref|XP_001761206.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687546|gb|EDQ73928.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M LY+ V +++ + + + + + + + G V + G +AY IRK
Sbjct: 1 MPLYDFVVMVKPAVDRRGLVELMKRLGERVYSRNGVVTNIKSFGRVNLAYGIRKRDGRFF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + M+I PPA E+ + DE +LR + +
Sbjct: 61 EGQMMQMSIMVPPAFPQEL-NFLNKDERLLRWMLIK 95
>gi|61216303|sp|Q83GX2|RS6_TROWT RecName: Full=30S ribosomal protein S6
Length = 100
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + L + + + + + ++ G V+ ++ LG+R AY I+ V
Sbjct: 7 REYELLVSLGSEFEPEA-ESRVRSLFTPVEPEGVTVKHLDVLGIRKFAYEIKGRNDGVCV 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + +I E+ R+MR+ E+V+R+ L V
Sbjct: 66 VVRFLANAGSIAEIGRQMRLTEDVIRTKLLRV 97
>gi|322700582|gb|EFY92336.1| 37S ribosomal protein Mrp17 [Metarhizium acridum CQMa 102]
Length = 118
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 3 LYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNRK 57
LYE + ++R ++ +K+ SL+ NGG VR ++ G+ ++ I K+
Sbjct: 2 LYELIAIVRPGNLGE--VKEIAQTVGSLVLRNGGVVRGLDNWGIFSLPKPISVHQMKHTH 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M S +++ +R++ ++RS + +
Sbjct: 60 GHYFVMRYDSSTKIHQDVRTTLRLEPRMIRSAHVKL 95
>gi|156084298|ref|XP_001609632.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796884|gb|EDO06064.1| hypothetical protein BBOV_II001050 [Babesia bovis]
Length = 116
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE L + I+++ I + L N G + +LG+R ++R++K R
Sbjct: 1 MVFYESYLLFSKHITNEDIAALVSHISKLATINHGILLRTQDLGLRYTSHRVQKPRLGLF 60
Query: 60 ----YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y ++ +A+ P + + + +E++LR +T +
Sbjct: 61 WYGKYYYVALAANPKVVPGLHKLYNSNEHILRHMTQRM 98
>gi|242624330|ref|YP_003002248.1| 30S ribosomal protein S6 [Aureoumbra lagunensis]
gi|239997438|gb|ACS36960.1| 30S ribosomal protein S6 [Aureoumbra lagunensis]
Length = 100
Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGE----VRLVNELGMRTIAYRIRKNRK 57
K Y V L Q +S +I+ + Y ++++ G V + L + Y I KN
Sbjct: 8 KNYSCVLLFDQTLSKSEIQSSSYNYAKVLKKLGASKISAVLKNDYL----LVYPINKNFD 63
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLR-SLTLL 92
+V ++ P AI R++R+DE+VLR LT+
Sbjct: 64 VKFVELSFLIAPQAIASYTRELRLDESVLRFFLTVK 99
>gi|226508136|ref|NP_001143791.1| hypothetical protein LOC100276559 [Zea mays]
gi|195627110|gb|ACG35385.1| hypothetical protein [Zea mays]
Length = 163
Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M LY+ + LL+ ++ + + + + + + G V V G ++AY IRK +
Sbjct: 1 MPLYDCMLLLKTTVTREVLAELVTRVARRACQRNGVVTDVKSFGKVSLAYGIRKLDGRHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ + + M + PP+ E+ + ++ +LR L + RD+
Sbjct: 61 QGHLMQMTMMVPPSFPQEL-HYLNKEDRLLRWLVVKHRDTVYGLEFLNADGGRDELRSFS 119
Query: 117 PRDRNVDR 124
D
Sbjct: 120 HGHTKGDY 127
>gi|197127736|gb|ACH44234.1| putative mitochondrial ribosomal protein S6 [Taeniopygia guttata]
Length = 121
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE +++ + + + + + E G VR + LG R++ Y+I K+++ +
Sbjct: 1 MPRYELALIVKA-MQRPETAAVLKRTVEALMERGAIVRNLENLGERSLPYKISKHKERHK 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
Y +++ +PP+ + M + D +V+R +
Sbjct: 60 RGGYFLIDLEAPPSLVSPMMDHLGRDIDVIRRAFIK 95
>gi|224096962|ref|XP_002188363.1| PREDICTED: similar to putative mitochondrial ribosomal protein S6
[Taeniopygia guttata]
Length = 121
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE +++ + + + + + E G VR + LG R++ Y+I K+++ +
Sbjct: 1 MPRYELALIVKA-MQRPETAAVLKRTVEALMERGAIVRNLENLGERSLPYKISKHKERHK 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
Y +++ +PP+ + M + D +V+R +
Sbjct: 60 RGGYFLIDLEAPPSLVSPMMDHLGRDIDVIRRAFIK 95
>gi|242211783|ref|XP_002471728.1| predicted protein [Postia placenta Mad-698-R]
gi|220729154|gb|EED83033.1| predicted protein [Postia placenta Mad-698-R]
Length = 115
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
M Y+ + + + IK+ + Q + GG VR +N G + R+R+++
Sbjct: 1 MPFYQMLCITAHYPEYKHIKELVQQTAMHVMNKGGVVRRLNSWGTLPLPQRMRRHQAYHQ 60
Query: 58 -AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL----LVDSHEQSPTLTIQR 106
Y M+ + P + E+ M+ D V+R L V+ P+ T R
Sbjct: 61 IGDYWTMHFDASPRTLKELDSLMKRDPRVVRWTMLKLGDKVEDVVTPPSKTTHR 114
>gi|46111687|ref|XP_382901.1| hypothetical protein FG02725.1 [Gibberella zeae PH-1]
Length = 466
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNRKA 58
LYE + ++R S ++K+ SL+ +NGG VR + G+ ++ I K+
Sbjct: 350 LYELIAIVRPG-SLLEVKEIAQTVGSLVLKNGGVVRGLANWGVFSLPKPISVHQMKHTHG 408
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+Y M + H+++ +R++ ++R
Sbjct: 409 HYFVMRYDAAAKVHHDVRNTLRLEPRMIR 437
>gi|118411222|ref|YP_874616.1| 30S ribosomal protein S6 [Thalassiosira pseudonana]
gi|224015819|ref|XP_002297557.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|125987758|sp|A0T104|RR6_THAPS RecName: Full=30S ribosomal protein S6, chloroplastic
gi|116739969|gb|ABK20839.1| 30S ribosomal protein S6 [Thalassiosira pseudonana]
gi|220967765|gb|EED86142.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 103
Score = 62.3 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + LL ++ + ++K Y +++ V G R ++Y I ++ ++
Sbjct: 6 KYEMMILLTEEFNDNELKTWAFNYAKALRKLNASEISVISRGKRDLSYEIANQKRGNFIQ 65
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTL 91
++ +S P I ++ D NVLR L L
Sbjct: 66 ISFSSIPKYIENFSSSLKFDSNVLRFLVL 94
>gi|255713424|ref|XP_002552994.1| KLTH0D06270p [Lachancea thermotolerans]
gi|238934374|emb|CAR22556.1| KLTH0D06270p [Lachancea thermotolerans]
Length = 142
Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----N 55
LYE V ++R ++ + K+ LI +N G VR V +G + + I+K +
Sbjct: 15 LYELVSIVRVVNPLAANTEAKELATTIGKLIIQNRGVVRRVLPVGNKLLPKIIKKDQEQH 74
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ Y+ M S A E+ R ++ D V+RS + VD+ +Q
Sbjct: 75 FQGYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVDTSKQ 117
>gi|47459062|ref|YP_015924.1| 30S ribosomal protein S6 [Mycoplasma mobile 163K]
gi|47458391|gb|AAT27713.1| 30S ribosomal protein s6 [Mycoplasma mobile 163K]
Length = 154
Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
YE + + + K I ++ + I + ++ +L +AY++ + A+Y
Sbjct: 3 NKYEILIMTDPK----EEKSVIEKFTNQIFK---KIEKFEQLERTELAYKVNHSSTAHYF 55
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHE-QSPTLTIQRHDRDDRNDRFPRDR 120
+N+ + I E R+ I + + R++ + +D+ + S + ++ + DR R+
Sbjct: 56 LVNVEAKGPEITEFNRRANISKTIWRTMVINLDTEKYLSKKASEKKFTKKITADRPRRNP 115
Query: 121 NVDRKQHVSEE 131
+ +++V E
Sbjct: 116 STINRENVGTE 126
>gi|187917993|ref|YP_001883556.1| 30S ribosomal protein S6 [Borrelia hermsii DAH]
gi|226703425|sp|B2S1U9|RS6_BORHD RecName: Full=30S ribosomal protein S6
gi|119860841|gb|AAX16636.1| SSU ribosomal protein S6P [Borrelia hermsii DAH]
Length = 131
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K + + + + N LG R + Y IRK + Y
Sbjct: 3 KKYEACFLFKS--EELEYKVALEDVKKQLTAFNASDFVENSLGERALEYSIRKQSRGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + + E++ ++R+ +N+LR + L+ + + + +R+ R+ +++R R++
Sbjct: 61 IIEFKMDSSNLKELEVQLRLIKNLLRYMILVKINKKVNVKKVKRRNFREFKDNRDTREKE 120
Query: 122 VDRKQHV 128
+
Sbjct: 121 LPESTAD 127
>gi|328770412|gb|EGF80454.1| hypothetical protein BATDEDRAFT_25050 [Batrachochytrium
dendrobatidis JAM81]
Length = 123
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 4 YEHVFLLR----------QDISSQQIK--DTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
YE V + R + +++ K + Q + +N G VR LG + + YR
Sbjct: 2 YELVLIARTKVNSMSIATGVLQAEKAKHKQLLKQCAMHVLDNNGVVRQFINLGKKDLPYR 61
Query: 52 IRKNR----KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+++++ K Y M + P + + + ++E+V+R +
Sbjct: 62 MKRHQEIHAKGAYFTMQFDASPLVMKSLSSSLALNEDVIRHTVI 105
>gi|28572283|ref|NP_789063.1| 30S ribosomal protein S6 [Tropheryma whipplei TW08/27]
gi|61216305|sp|Q83IC0|RS6_TROW8 RecName: Full=30S ribosomal protein S6
gi|28410414|emb|CAD66800.1| 30s ribosomal protein S6 [Tropheryma whipplei TW08/27]
Length = 100
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
+ YE + L + + + + + ++ G V+ ++ LG+R AY I+ V
Sbjct: 7 REYELLVSLGSEFEPEA-ESRVRSLFTPVEPEGVTVKHLDVLGVRKFAYEIKGRNDGVCV 65
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + + +I E+ R+MR+ E+V+R+ L V
Sbjct: 66 VVRLLANAGSIAEIGRQMRLTEDVIRTKLLRV 97
>gi|119952917|ref|YP_945126.1| 30S ribosomal protein S6 [Borrelia turicatae 91E135]
gi|254765222|sp|A1QYR4|RS6_BORT9 RecName: Full=30S ribosomal protein S6
gi|119861688|gb|AAX17456.1| SSU ribosomal protein S6P [Borrelia turicatae 91E135]
Length = 133
Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K + + + + N LG R + Y IRK + Y
Sbjct: 3 KKYEACFLFKS--EELEYKAALEEVKKQLTVFNASDFAENSLGERALEYPIRKQLRGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + E++ ++++ +N+LR + L+ + + S +R+ R+ +++R +++
Sbjct: 61 IIEFKMDSENLKELEIQLKLIKNLLRHMILVKINKKVSVKKVKRRNFREFKDNRDIKEKE 120
>gi|118783345|ref|XP_562993.2| AGAP003217-PA [Anopheles gambiae str. PEST]
gi|116129169|gb|EAL40731.2| AGAP003217-PA [Anopheles gambiae str. PEST]
Length = 150
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ +S + T+ + + I + GG +R ++ LG + + ++ + R
Sbjct: 1 MPTYELSVILRQ-MSRPDMVATLKRTATAIFDKGGIIRKLDNLGTKPLPFKTSAHGLVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y +PP+AI ++ + D ++LR D +Q
Sbjct: 60 TGSYFVFKFDTPPSAIDDLDEEYGRDVDILRKRIYRADVSQQE 102
>gi|124507191|ref|XP_001352192.1| mitochondrial ribosomal protein S6 precursor, putative [Plasmodium
falciparum 3D7]
gi|23505223|emb|CAD52003.1| mitochondrial ribosomal protein S6 precursor, putative [Plasmodium
falciparum 3D7]
Length = 212
Score = 60.8 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
IK I +Y ++ + V LG R + I+K +AYY+ + P+ I E+
Sbjct: 106 DIKKKIAEYIYELKLIEAQNFKVVYLGKRKLVRPIKKLTEAYYILFSFEIYPSMIEEISN 165
Query: 78 KMRIDENVLRSLTLLVDSHEQS 99
K+++ + +LR + + +S
Sbjct: 166 KLKLQDPILRFIITKNEKKSKS 187
>gi|297742384|emb|CBI34533.3| unnamed protein product [Vitis vinifera]
Length = 101
Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--------- 57
+ +LR D+S + +Y+ L+ GG V G+ +AY I+K K
Sbjct: 1 MAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLD 60
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y+ + P ++ ++ + D++V+RS + +
Sbjct: 61 GIYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRK 98
>gi|50304353|ref|XP_452126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641258|emb|CAH02519.1| KLLA0B13365p [Kluyveromyces lactis]
Length = 129
Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----N 55
LYE V ++R ++ + K+ LI +N G VR + +G + + I+K +
Sbjct: 2 LYELVSIVRVSNPLAANAEAKELATTIGKLIIQNRGVVRKIVPMGNKLLPKIIKKDQEQH 61
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ Y+ M S E+ R ++ D V+RS + + +H++
Sbjct: 62 FQGYHFLMLFDSSAPVQSEILRTLKKDPRVIRSNIIKLSTHKK 104
>gi|68070171|ref|XP_676997.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496937|emb|CAH99130.1| conserved hypothetical protein [Plasmodium berghei]
Length = 114
Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-Y 59
M LYE L + I +K+ + + + + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIANKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 Y----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + S +I ++ + +LR L + +
Sbjct: 61 YFGRFYCITFYSNSKSIKDLNELFHSNTYILRFLNVKMK 99
>gi|321478978|gb|EFX89934.1| hypothetical protein DAPPUDRAFT_230080 [Daphnia pulex]
Length = 148
Score = 60.4 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LR +S ++ ++ + I + GG +R +G + + ++IR + R
Sbjct: 1 MPSYELSLMLR-VLSKPELVSSLKRSAETIVQQGGVLRQFISIGTKPLPFKIRAHTQWHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ Y M +P +A+ + + + D +++R+ + + +
Sbjct: 60 EGTYFLMKFDAPSSAVEHLNDEFKRDIDLIRTHVVKCEEPVK 101
>gi|326432360|gb|EGD77930.1| hypothetical protein PTSG_09565 [Salpingoeca sp. ATCC 50818]
Length = 112
Score = 60.0 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M YE ++R + S+ + + +Q GG V+ V +G + + ++++ +
Sbjct: 1 MPSYELCMIMRA-LRSEALAKELVPILQRVQSLGGVVQDVKSVGSQPLPHKMKAHFEHHD 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
K Y F+ S P A+ ++ ++ + +++R + + + + P
Sbjct: 60 KGTYSFLRFESSPTALPQLDTALKRNSSIIRHNFVKLPALDAKPM 104
>gi|242055939|ref|XP_002457115.1| hypothetical protein SORBIDRAFT_03g001540 [Sorghum bicolor]
gi|241929090|gb|EES02235.1| hypothetical protein SORBIDRAFT_03g001540 [Sorghum bicolor]
Length = 162
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + L++ ++ + + D + + + G V V G + Y I+K ++
Sbjct: 1 MPLYDCMLLVKPTVTREVVADLVTRVARRACQRNGVVTDVKSFGKVNLGYGIKKLDGRHF 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ M + PP+ E+ + ++ +LR L + + R++ +
Sbjct: 61 QGQLMQMTMMVPPSFPQEL-HYLNKEDRLLRWLVVKHRDAVYGLEFINEDDGRNELSGYS 119
Query: 117 PRDRNVDRK 125
D
Sbjct: 120 QAHTKDDYD 128
>gi|119174066|ref|XP_001239394.1| hypothetical protein CIMG_09015 [Coccidioides immitis RS]
gi|303314015|ref|XP_003067016.1| ribosomal protein S6 containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106684|gb|EER24871.1| ribosomal protein S6 containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 121
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++K+ + +GG VR G + + K+
Sbjct: 2 LYELIAIVRPG-SLNEVKEIARTAGLQVLRSGGVVRGFTNWGAFRLPHPTTKHQAQYTTG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y+ M S E++R + +D ++R + + S +
Sbjct: 61 YHFIMRFDSSGPVQQEVRRTLGLDPRMIRFSVVKLGSTLEE 101
>gi|70945193|ref|XP_742442.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521430|emb|CAH75062.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 114
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-Y 59
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIVSINDLGWRKFAFCIKKPKVGTF 60
Query: 60 Y----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + S +I ++ + +LR L +
Sbjct: 61 YFGRFYCITFYSNSKSIRDLNELFHSNTYILRFLNTKMK 99
>gi|320039289|gb|EFW21223.1| 37S ribosomal protein Mrp17 [Coccidioides posadasii str. Silveira]
Length = 121
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++K+ + +GG VR G + + K+
Sbjct: 2 LYELIAIVRPG-SLNEVKEIARTAGLQVLRSGGVVRGFTNWGAFRLPHPTTKHQAQYTTG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y+ M S E++R + +D ++R + + S +
Sbjct: 61 YHFIMRFDSSGPVQQEVRRTLGLDPRMIRFSVVKLGSTLEE 101
>gi|156059096|ref|XP_001595471.1| hypothetical protein SS1G_03560 [Sclerotinia sclerotiorum 1980]
gi|154701347|gb|EDO01086.1| hypothetical protein SS1G_03560 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 122
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 3 LYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RK 57
LYE V ++R ++ +K+ SL+ +GG +R + G+ ++ R RK+ +
Sbjct: 2 LYELVAIVRPGNLVE--VKEIARTAGSLVLRSGGTIRGIRNWGISSLPKRTRKHQAQYHE 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPT-------LTIQRHDR 109
+Y M + +++ + +D +++ ++ + D +S + T++ H +
Sbjct: 60 GHYFVMRYDASSKTQDDVRTTLGLDPRMIKFSSVKLGDGTLESLSKIGSTIPWTMKEHLK 119
Query: 110 DDR 112
++
Sbjct: 120 ENN 122
>gi|225166109|ref|ZP_03727840.1| ribosomal protein S6 [Opitutaceae bacterium TAV2]
gi|224799651|gb|EEG18149.1| ribosomal protein S6 [Opitutaceae bacterium TAV2]
Length = 98
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR-KNRKAYY 60
+ Y F++ I+ + ++ I +V V ++G + K +Y
Sbjct: 6 RNYRATFIIDNSGKEDTIEQILEGVKNDITAVEAQVTAVEDVGRKDFVRVTNPKRVAGHY 65
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
V + + P +A +K ++R++ +V R+
Sbjct: 66 VHVTFSGPASAPAALKERLRLNHSVYRTFV 95
>gi|157104178|ref|XP_001648287.1| mitochondrial ribosomal protein, S6, putative [Aedes aegypti]
gi|108880402|gb|EAT44627.1| mitochondrial ribosomal protein, S6, putative [Aedes aegypti]
Length = 149
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ + + + I + GG +R ++ LG R + ++ + R
Sbjct: 1 MPTYELALILRQ-MPRPEMVSVLKRTANAIFDKGGIIRKLDNLGTRPLPFKTSVHGLVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y +PP+ + +++ + D +++R D+ Q
Sbjct: 60 TGSYFVYKFDTPPSTVEDLEEEYGRDVDIIRKRIYKADATLQE 102
>gi|149199260|ref|ZP_01876298.1| hypothetical protein LNTAR_04601 [Lentisphaera araneosa HTCC2155]
gi|149137685|gb|EDM26100.1| hypothetical protein LNTAR_04601 [Lentisphaera araneosa HTCC2155]
Length = 106
Score = 60.0 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 42/106 (39%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
MK Y+ +F+L + + + I GG V +G + A I K Y
Sbjct: 1 MKKYDAIFILNDRKYEDGGEAFSKKVEEQIVSLGGSDVTVKNMGRKQFARAIGKRTSGLY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+ + P + E R+D VLR++ + E + TL + +
Sbjct: 61 LRFFLNLPEDKVSEFIESYRLDNTVLRTVVYNYEIPENAVTLDLNK 106
>gi|13620885|dbj|BAB40995.1| mitochondrial ribosomal protein S6 [Homo sapiens]
Length = 166
Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + T+ + + + G VR + LG R + YRI +++
Sbjct: 42 MPRYELALILKA-MQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHN 100
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P AA+ M + D +V+R +
Sbjct: 101 RGGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 136
>gi|169847060|ref|XP_001830242.1| hypothetical protein CC1G_12771 [Coprinopsis cinerea okayama7#130]
gi|116508688|gb|EAU91583.1| hypothetical protein CC1G_12771 [Coprinopsis cinerea okayama7#130]
Length = 119
Score = 59.6 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M LY+ + + + I++ I Q + + + GG VR + G RT+ R+++
Sbjct: 1 MPLYQMFCITKHYPEYKHIRELIRQSATHVMKAGGVVRKIESSGTRTLPQRMKRQGPYVD 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
Y + + P + + MR D VLR L + D E
Sbjct: 61 IGDYWSLYFDTNPRTLRSLNGIMRRDPRVLRWTVLKLADKVED 103
>gi|194747433|ref|XP_001956156.1| GF25065 [Drosophila ananassae]
gi|190623438|gb|EDV38962.1| GF25065 [Drosophila ananassae]
Length = 147
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M YE +LRQ + ++ I + I + GG +R + +G R + +++ + +R
Sbjct: 1 MPSYELALVLRQ-LPRNELMSVIKRTAESILDKGGIIRKLENMGSRALPHKVSEDGLVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + + + P I ++K + D +++R ++ EQ P
Sbjct: 60 EGTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKLEEPEQQP 103
>gi|67983493|ref|XP_669116.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482868|emb|CAI03076.1| hypothetical protein PB301034.00.0 [Plasmodium berghei]
Length = 114
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-Y 59
M LYE + + I +K+ + + + + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIPVNKHIKKDDVKNLMKNFHFIANKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 Y----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y + S +I ++ + +LR L + +
Sbjct: 61 YFGRFYCITFYSNSKSIKDLNELFHSNTYILRFLNVKMK 99
>gi|182414103|ref|YP_001819169.1| ribosomal protein S6 [Opitutus terrae PB90-1]
gi|177841317|gb|ACB75569.1| ribosomal protein S6 [Opitutus terrae PB90-1]
Length = 100
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI--RKNRKAY 59
+ Y F+L I+ I + +I GEV V LG + R+ RK
Sbjct: 8 RSYRASFILDNRGKEDSIEQIIDGVKEVIAAVHGEVTAVENLGKKDFV-RVTDRKMTSGA 66
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLT 90
YV ++ P A +K ++R++ +V R+
Sbjct: 67 YVQISFNGPAEAPAHLKERLRLNGSVYRTFV 97
>gi|261187816|ref|XP_002620326.1| 30S ribosomal protein S6 [Ajellomyces dermatitidis SLH14081]
gi|239593539|gb|EEQ76120.1| 30S ribosomal protein S6 [Ajellomyces dermatitidis SLH14081]
gi|239613306|gb|EEQ90293.1| 30S ribosomal protein S6 [Ajellomyces dermatitidis ER-3]
gi|327351801|gb|EGE80658.1| 30S ribosomal protein S6 [Ajellomyces dermatitidis ATCC 18188]
Length = 133
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKN----RK 57
LYE + ++R + + I + L I +GG +R + G + I K+
Sbjct: 2 LYELIAVVRPGSVQEVRE--IARVTGLQILYSGGVIRGLTNWGPFRLPRPITKHQTKYST 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M S A ++R + +D ++R + + D E+
Sbjct: 60 GHHFIMRFDSSSAVQQSVRRTLGLDPRMIRFSVVKLGDKLEE 101
>gi|291221349|ref|XP_002730679.1| PREDICTED: mitochondrial ribosomal protein S6-like [Saccoglossus
kowalevskii]
Length = 122
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE + R S+ I + + E GG++R + LG + + +++ + R
Sbjct: 1 MPRYEMALIFRALNRSETISAM-KRVGESVIERGGQIRTIENLGEKDLPFKMVAHSQGYR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+ Y+ M P+ + M +R D +V+R
Sbjct: 60 RGRYIVMEFDGKPSIVSSMVEYLRRDVDVIR 90
>gi|156392498|ref|XP_001636085.1| predicted protein [Nematostella vectensis]
gi|156223185|gb|EDO44022.1| predicted protein [Nematostella vectensis]
Length = 119
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
M YE + + R ++ + + + Q I GG VR + LG + + YR+R + +
Sbjct: 1 MPRYELIMIAR-VLTKEGFSNILRQTCQSIISKGGVVRKIENLGQQQLPYRMRAHAEWHT 59
Query: 58 -AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
Y +++ + +K +++++ +++R + +
Sbjct: 60 QGRYFLLDMDMNADHLELLKNELKMEPDIIRPSVVKL 96
>gi|71894543|ref|YP_278651.1| 30S ribosomal protein S6 [Mycoplasma synoviae 53]
Length = 163
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVF 62
YE + L+ S+ ++ + +S+ ++ + +L +AY I K + A Y
Sbjct: 4 KYEIMVLVGPKTSASTVESFL---KSVFHDD---FKKAEKLERTELAYEINKTKHAQYFL 57
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL--TIQRHDRDDRNDRFPRDR 120
+N+ + I E R I++ + R L + +D+ + + T ++ D R+ R +
Sbjct: 58 VNLETERKNIAEFIRLSNINKEIWRHLVVNLDTEKGLNKVFKTHRKFGHDFRDQRSHHGQ 117
Query: 121 NVDRKQHVSEEK 132
+ ++ ++K
Sbjct: 118 AGEFRKREPQQK 129
>gi|308812434|ref|XP_003083524.1| unnamed protein product [Ostreococcus tauri]
gi|116055405|emb|CAL58073.1| unnamed protein product [Ostreococcus tauri]
Length = 145
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V LLR D + Q++++ + G++ AY I+ AY V +
Sbjct: 51 YEGVLLLRPDCDDATRSGALDQFKAMFNDGLASWEQTE-RGLQPNAYEIKGYPDAYQVVV 109
Query: 64 NIASPPAAIH----EMKR-KMRIDENVLRSLTLL 92
N + PPAA E+ + + +E +LRS+ L
Sbjct: 110 NFSCPPAAFKNAYEELSKPVVGQEEVILRSMFLK 143
>gi|189218767|ref|YP_001939408.1| ribosomal protein S6 [Methylacidiphilum infernorum V4]
gi|189185625|gb|ACD82810.1| Ribosomal protein S6 [Methylacidiphilum infernorum V4]
Length = 111
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTI---AYRIRKNRKA 58
+ Y+ +++L +K+ I Q + I + GG+V + ++ R A +I
Sbjct: 3 RTYDALYILDIQAKEDSLKEMIEQIEKTITQLGGKVISLQKMDKRKFERVATKID---SG 59
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
YY+ M I P A+ E++ K++ + +V R +
Sbjct: 60 YYLNMGIELSPYALKELEAKLKNNPSVFRQFYVKRK 95
>gi|209732282|gb|ACI67010.1| Mitochondrial 28S ribosomal protein S6 [Salmo salar]
Length = 120
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE +++ + + + + + E G VR + LG + + Y+I K+ + +
Sbjct: 1 MPRYELALIVKA-MQRPETAALLRRTVETLMERGAVVRGLENLGEKLLPYKISKHNERHS 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
Y ++ + P + + + D +V+R L D P+
Sbjct: 60 RGGYFLIDFHAAPGIVTGLLDHLERDVDVVRPTVLKND---PEPS 101
>gi|71895585|ref|NP_001026657.1| 28S ribosomal protein S6, mitochondrial [Gallus gallus]
gi|82081175|sp|Q5ZIJ2|RT06_CHICK RecName: Full=28S ribosomal protein S6, mitochondrial;
Short=MRP-S6; Short=S6mt
gi|53135720|emb|CAG32451.1| hypothetical protein RCJMB04_25m4 [Gallus gallus]
Length = 121
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M YE +L+ + + + + + E G VR + LG R + Y+I K +R
Sbjct: 1 MPRYELALILKA-MQRPETAAVLKRTVEALMERGAIVRNLENLGERALPYKISKHNHRHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y +++ PP+ + M + D +++R +
Sbjct: 60 RGGYFLVDLEGPPSIVSTMMDHLGRDIDIIRRAFIK 95
>gi|293340738|ref|XP_002724748.1| PREDICTED: mitochondrial ribosomal protein S6-like [Rattus
norvegicus]
gi|293352105|ref|XP_002727920.1| PREDICTED: mitochondrial ribosomal protein S6-like [Rattus
norvegicus]
Length = 645
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG R + YRI +++
Sbjct: 521 MPRYELALILKA-MRRPETAAALKRTIESLMDRGAIVRNLENLGERALPYRISSHSQQHS 579
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P A+ M + D +V+R +
Sbjct: 580 RGGYFLVDFYAPTNAVESMLEHLARDTDVVRPNIVK 615
>gi|17986127|ref|NP_523925.1| mitochondrial ribosomal protein S6 [Drosophila melanogaster]
gi|195587756|ref|XP_002083627.1| GD13839 [Drosophila simulans]
gi|13959572|sp|Q9VZD5|RT06_DROME RecName: Full=Probable 28S ribosomal protein S6, mitochondrial;
Short=MRP-S6; Short=S6mt
gi|7292486|gb|AAF47889.1| mitochondrial ribosomal protein S6 [Drosophila melanogaster]
gi|17944513|gb|AAL48145.1| RH10862p [Drosophila melanogaster]
gi|194195636|gb|EDX09212.1| GD13839 [Drosophila simulans]
gi|220949208|gb|ACL87147.1| mRpS6-PA [synthetic construct]
gi|220958348|gb|ACL91717.1| mRpS6-PA [synthetic construct]
Length = 147
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + + + P I ++K + D +++R V+ EQ P
Sbjct: 60 EGTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQKP 103
>gi|148228494|ref|NP_001090858.1| mitochondrial ribosomal protein S6 [Xenopus (Silurana)
tropicalis]
gi|134024331|gb|AAI35213.1| LOC100038272 protein [Xenopus (Silurana) tropicalis]
Length = 122
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +L+ + + T+ + + E G VR + LG + + Y+I K+
Sbjct: 1 MPRYEMALILKA-MQRPETAATLKRTIEALFEGGAVVRNLENLGEKALPYKISKHNLRHT 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+ Y ++ +PP I M + D +V+R
Sbjct: 60 RGGYFLIDFHAPPTIIPSMLDHLSRDIDVIR 90
>gi|70939475|ref|XP_740274.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56517880|emb|CAH81584.1| hypothetical protein PC000709.04.0 [Plasmodium chabaudi chabaudi]
Length = 114
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-Y 59
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 Y----VFMNIASPPAAIHEMKRKMRIDENVLRSL--TLL 92
Y + S +I ++ + +LR L T+
Sbjct: 61 YFGRFYCITFYSNSKSIRDLNELFHSNTYILRFLNTTMK 99
>gi|209737418|gb|ACI69578.1| Mitochondrial 28S ribosomal protein S6 [Salmo salar]
gi|209737632|gb|ACI69685.1| Mitochondrial 28S ribosomal protein S6 [Salmo salar]
Length = 120
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE +++ + + + + + E G VR + LG + + Y+I K+ + +
Sbjct: 1 MPRYELALIVKA-MQRPETAALLRRTVETLMERGAVVRGLENLGEKLLPYKISKHNERHS 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPT 101
Y ++ + P + + + D +V+R L D P+
Sbjct: 60 RGGYFLIDFHAAPGIVTGLLDHLERDIDVVRPTVLKND---PEPS 101
>gi|312384063|gb|EFR28882.1| hypothetical protein AND_02631 [Anopheles darlingi]
Length = 150
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ T+ + + I + GG +R + LG + + ++ + R
Sbjct: 1 MPTYELSLILRQ-MERPELVATLKRTATAIFDKGGIIRKLENLGTKALPFKTSAHGIVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y +PP+AI ++ + D +++R D
Sbjct: 60 NGSYFVFKFDTPPSAIDDLDEEYGRDVDIVRKRIYRAD 97
>gi|254233452|ref|ZP_04926778.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis C]
gi|124603245|gb|EAY61520.1| 30S ribosomal protein S6 rpsF [Mycobacterium tuberculosis C]
Length = 43
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 54 KNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
K+ + YV +++ + PA + E+ R++ ++E+VLR+ + D H
Sbjct: 1 KHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH 43
>gi|315052900|ref|XP_003175824.1| 37S ribosomal protein Mrp17 [Arthroderma gypseum CBS 118893]
gi|311341139|gb|EFR00342.1| 37S ribosomal protein Mrp17 [Arthroderma gypseum CBS 118893]
Length = 132
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE V ++RQ S Q++KD + +GG VR G T+ K+
Sbjct: 2 LYELVAIVRQG-SLQEVKDIARTLGLQVIRSGGVVRGYTNWGPFTLPRPTTKHQVKNTAG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + EM+R + +D ++R + +
Sbjct: 61 HHFIMRFDASAPVQKEMRRTLGLDPRMIRYSVVKL 95
>gi|171681160|ref|XP_001905524.1| hypothetical protein [Podospora anserina S mat+]
gi|170940538|emb|CAP65766.1| unnamed protein product [Podospora anserina S mat+]
Length = 118
Score = 57.7 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKA 58
LYE + ++R + +K+ + +I + GG +R + G ++ I +++ K
Sbjct: 2 LYETIGIVRSGHLPE-VKELVLTAGKIILQQGGVIRDIRNWGTFSLPQAISRGQQRHTKG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y M A ++++ + +D V+RS + +
Sbjct: 61 HYFIMRYDCGIKANEQVRKTLALDVRVIRSANVKL 95
>gi|220679356|emb|CAX13566.1| novel protein (zgc:153390) [Danio rerio]
Length = 118
Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +++ + + + + + + E G VR + LG R + Y+I K+
Sbjct: 1 MPRYEL-YMVLKAMQRPETAAVLRRTVETLFERGAVVRSLENLGERKLPYKISKHDSRQS 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y ++ + P + + + D +VLR + D
Sbjct: 60 HGGYFSIDFHASPNIVSGLLNHLERDVDVLRPTVVKKD 97
>gi|255630573|gb|ACU15646.1| unknown [Glycine max]
Length = 144
Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +FL + I + + D + + + G V + LG + Y ++K YY
Sbjct: 1 MPPYDCMFLFKPHIRKEAVMDLVVRVGKHVCRRNGVVTDIKSLGKVQLGYGVKKLDGRYY 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ M++ + P E+ + ++ +LR L +
Sbjct: 61 QGLLMQMSMMATPEINKEL-HYLNKEDRLLRWLLVKQ 96
>gi|194866475|ref|XP_001971890.1| GG15222 [Drosophila erecta]
gi|190653673|gb|EDV50916.1| GG15222 [Drosophila erecta]
Length = 147
Score = 57.7 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIRRTAESILDKGGIIRKLENLGTRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + + + P I ++K + D +++R V+ EQ P
Sbjct: 60 EGTHFSIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQMP 103
>gi|295669824|ref|XP_002795460.1| 37S ribosomal protein Mrp17 [Paracoccidioides brasiliensis Pb01]
gi|226285394|gb|EEH40960.1| 37S ribosomal protein Mrp17 [Paracoccidioides brasiliensis Pb01]
Length = 135
Score = 57.7 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
LYE + ++R + + I + L I GG +R + G + I K++
Sbjct: 2 LYELIAVVRPGSLQEVRE--IARVTGLQILYGGGVIRGLTNWGPFRLPRPITKHQTKYAT 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
Y+ M S A ++R + +D ++R + + +
Sbjct: 60 GYHFIMRFDSSSAVQKSVRRTLGLDPRMIRFSVVKLGEKLE 100
>gi|39942080|ref|XP_360577.1| hypothetical protein MGG_03120 [Magnaporthe oryzae 70-15]
gi|145015906|gb|EDK00396.1| hypothetical protein MGG_03120 [Magnaporthe oryzae 70-15]
Length = 128
Score = 57.3 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGM----RTIAYRIRKNRKA 58
LYE + ++R + +K+ + S I +GG +R + G+ R Y + +K
Sbjct: 2 LYEMIAIIRPGKIHE-VKEIMQTAGSTILRSGGVIRDMANWGVFMLPRATTYAQARYKKG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQR 106
+YV M + A + +R++ V+R+ ++ + + + +
Sbjct: 61 HYVVMRYDAGVKAQETVSMALRLEPRVIRATSVKLGGGKLERMAKLNK 108
>gi|224534847|ref|ZP_03675416.1| 30S ribosomal protein S6 [Borrelia spielmanii A14S]
gi|224513787|gb|EEF84112.1| 30S ribosomal protein S6 [Borrelia spielmanii A14S]
Length = 139
Score = 57.3 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEFEYKGSLEEVKKSLELFGATDIISNFIGERALEYPIKKQTRGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|113671790|ref|NP_001038921.1| 28S ribosomal protein S6, mitochondrial [Danio rerio]
gi|112418940|gb|AAI22264.1| Zgc:153390 [Danio rerio]
Length = 118
Score = 57.3 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +++ + + + + + + E G VR + LG R + Y+I K+
Sbjct: 1 MPRYEL-YMVLKAMQRPETAAVLRRTVETLFERGAVVRSLENLGERKLPYKISKHDSRQS 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y ++ + P + + + D +VLR + D
Sbjct: 60 HGGYFSIDFHASPNIVSGLLNHLERDVDVLRPTVVKKD 97
>gi|203284040|ref|YP_002221780.1| 30S ribosomal protein S6 [Borrelia duttonii Ly]
gi|226703424|sp|B5RLI9|RS6_BORDL RecName: Full=30S ribosomal protein S6
gi|201083483|gb|ACH93074.1| 30S ribosomal protein S6 [Borrelia duttonii Ly]
Length = 134
Score = 57.3 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL R + K + + + + G + N +G R + Y +RK + Y
Sbjct: 3 KKYEGCFLFRS--EELEYKSALEEVKKQLVAFGAVDFVENSIGERALEYPVRKQLRGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + E++ ++++ +N+LR + L+ + + S +R+ R+ R++R +++
Sbjct: 61 IIEFKMASDNLRELEAQLKLIKNLLRYMILVKINRKVSVKKVKRRNFREYRDNRDIKEKE 120
Query: 122 VDRKQHVS 129
+ +V
Sbjct: 121 QPSESNVD 128
>gi|296491689|gb|DAA33722.1| 28S ribosomal protein S6, mitochondrial [Bos taurus]
Length = 122
Score = 56.9 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG RT+ Y++ +++
Sbjct: 1 MPRYELALILKA-MQRPETAAALKRTLEALMDRGAVVRSLENLGERTLPYKMSAHSQRHT 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P + + + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTTTVASIMEHLSRDIDVIRPNVVK 95
>gi|326533654|dbj|BAK05358.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 56.9 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + +++ ++ + I + + + + + G V + G + Y IRK ++
Sbjct: 1 MPLYDCMLMVKPMVTKEAIAELVARVAARAYQRNGVVTDLKSFGKVHLGYGIRKLDGRHF 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ M + PP+ E+ + ++ +LR L +
Sbjct: 61 QGQLLQMTMMVPPSFTQEL-HYLNKEDRLLRWLVVK 95
>gi|326473649|gb|EGD97658.1| 37S ribosomal protein Mrp17 [Trichophyton tonsurans CBS 112818]
gi|326480777|gb|EGE04787.1| 37S ribosomal protein Mrp17 [Trichophyton equinum CBS 127.97]
Length = 132
Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE V ++RQ S Q++KD + +GG VR G T+ K+
Sbjct: 2 LYELVAIVRQG-SLQEVKDIARTLGLQVIRSGGVVRGYTNWGPFTLPRPTTKHQVKNTVG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + EM+R + +D ++R + +
Sbjct: 61 HHFIMRFDAAAPVQKEMRRTLGLDPRMIRYSVVKL 95
>gi|212538389|ref|XP_002149350.1| 37S ribosomal protein Mrp17 [Penicillium marneffei ATCC 18224]
gi|210069092|gb|EEA23183.1| 37S ribosomal protein Mrp17 [Penicillium marneffei ATCC 18224]
Length = 149
Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S +++K+ + +GG VR G T+ K+ +
Sbjct: 2 LYELIAIVRPG-SLKEVKEIAKNAGVQVLRSGGVVRGYTNWGTFTLPKPTTKHQARYSEG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + V D E+
Sbjct: 61 WHFIMRFDASGPVQSAVRRTLSLDPRMIRFSVVKVGDKLEE 101
>gi|296815798|ref|XP_002848236.1| 37S ribosomal protein Mrp17 [Arthroderma otae CBS 113480]
gi|238841261|gb|EEQ30923.1| 37S ribosomal protein Mrp17 [Arthroderma otae CBS 113480]
Length = 132
Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE V ++RQ S Q++KD + +GG VR G T+ K+
Sbjct: 2 LYELVAIVRQG-SLQEVKDIARTLGLQVIRSGGVVRGYTNWGPFTLPRPTTKHQVKNSVG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + EM+R + +D ++R + +
Sbjct: 61 HHFIMRFDASAPVQKEMRRTLGLDPRMIRYSVVKL 95
>gi|242806734|ref|XP_002484806.1| 37S ribosomal protein Mrp17 [Talaromyces stipitatus ATCC 10500]
gi|218715431|gb|EED14853.1| 37S ribosomal protein Mrp17 [Talaromyces stipitatus ATCC 10500]
Length = 148
Score = 56.9 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S +++K+ + +GG VR G T+ K+ +
Sbjct: 2 LYELIAIVRPG-SLKEVKEIAKNAGVQVLRSGGVVRGYTNWGTFTLPKPTTKHQARYSEG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E+
Sbjct: 61 WHFIMRFDASGPVQAAVRRTLSLDPRMIRFSVVKLGDKLEE 101
>gi|327299788|ref|XP_003234587.1| 37S ribosomal protein Mrp17 [Trichophyton rubrum CBS 118892]
gi|326463481|gb|EGD88934.1| 37S ribosomal protein Mrp17 [Trichophyton rubrum CBS 118892]
Length = 132
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE V ++RQ S Q++KD + +GG VR G T+ K+
Sbjct: 2 LYELVAIVRQG-SLQEVKDIARTLGLQVIRSGGVVRGYTNWGPFTLPRPTTKHQVKNTVG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + EM+R + +D ++R + +
Sbjct: 61 HHFIMRFDAAAPVQKEMRRTLGLDPRMIRYSVVKL 95
>gi|224144016|ref|XP_002325157.1| predicted protein [Populus trichocarpa]
gi|222866591|gb|EEF03722.1| predicted protein [Populus trichocarpa]
Length = 136
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + +L+ + + + D + + + G V + G + Y I+K +Y
Sbjct: 1 MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60
Query: 61 --VFMNIA--SPPAAIHEMKRKMRIDENVLRSLTLL 92
M I + P E+ + ++ +LR L +
Sbjct: 61 QGQLMQITMMATPNINKEL-HYLNKEDRLLRWLLVK 95
>gi|259488620|tpe|CBF88203.1| TPA: 37S ribosomal protein Mrp17 (AFU_orthologue; AFUA_1G12065)
[Aspergillus nidulans FGSC A4]
Length = 121
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S +++D +L+ +GG +R G+ + K+
Sbjct: 2 LYELIAIVRPG-SLNEVRDIARNAGTLVLRSGGVIRGYTNWGVFRLPKTTTKHQARYTDG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQSPTLTIQRHDRDDRN 113
++ M + ++R++ +D ++R + + D ++ +T + D RN
Sbjct: 61 HHFIMRFDAAAPVQMGIRRQLALDPRMIRFSVVKLGDKLDEVKDVTGKVEWNDTRN 116
>gi|94966962|ref|NP_001035674.1| 28S ribosomal protein S6, mitochondrial [Bos taurus]
gi|108935892|sp|P82931|RT06_BOVIN RecName: Full=28S ribosomal protein S6, mitochondrial;
Short=MRP-S6; Short=S6mt
gi|73586927|gb|AAI02979.1| Mitochondrial ribosomal protein S6 [Bos taurus]
Length = 124
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG RT+ Y++ +++
Sbjct: 1 MPRYELALILKA-MQRPETAAALKRTLEALMDRGAVVRSLENLGERTLPYKMSAHSQRHT 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P + + + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTTTVASIMEHLSRDIDVIRPNVVK 95
>gi|255626419|gb|ACU13554.1| unknown [Glycine max]
Length = 144
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ +FL + I + + D + + + G V + LG + Y ++K YY
Sbjct: 1 MPPYDCMFLFKPHIRKEAVMDLVVRVGKHVCRRNGVVIDIKSLGRVQLGYGVKKLDGRYY 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ M++ + P E+ + ++ +LR L +
Sbjct: 61 QGLLMQMSMMATPEINKEL-HYLNKEDRLLRWLLVKQ 96
>gi|145239819|ref|XP_001392556.1| 37S ribosomal protein Mrp17 [Aspergillus niger CBS 513.88]
gi|134077069|emb|CAK39942.1| unnamed protein product [Aspergillus niger]
Length = 121
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S Q+++D + +GG VR G + K+ R+
Sbjct: 2 LYELIAVVRPG-SLQEVRDIARNAGIQVLRSGGVVRGFTNWGTFRLPRPTTKHQARYREG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E+
Sbjct: 61 HHFIMRFDASGPVQAAVRRTLGLDPRMVRFSVVKLGDKLEE 101
>gi|16554616|ref|NP_115865.1| 28S ribosomal protein S6, mitochondrial [Homo sapiens]
gi|13959558|sp|P82932|RT06_HUMAN RecName: Full=28S ribosomal protein S6, mitochondrial;
Short=MRP-S6; Short=S6mt
gi|14603226|gb|AAH10076.1| Mitochondrial ribosomal protein S6 [Homo sapiens]
gi|21391480|gb|AAL35739.1| mitochondrial ribosomal protein S6 [Homo sapiens]
gi|33870068|gb|AAH04976.2| Mitochondrial ribosomal protein S6 [Homo sapiens]
gi|33990765|gb|AAH00547.2| Mitochondrial ribosomal protein S6 [Homo sapiens]
gi|55930992|gb|AAH51302.1| Mitochondrial ribosomal protein S6 [Homo sapiens]
gi|119630203|gb|EAX09798.1| hCG2008574, isoform CRA_d [Homo sapiens]
gi|189065297|dbj|BAG35020.1| unnamed protein product [Homo sapiens]
gi|312153314|gb|ADQ33169.1| mitochondrial ribosomal protein S6 [synthetic construct]
Length = 125
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + T+ + + + G VR + LG R + YRI +++
Sbjct: 1 MPRYELALILKA-MQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHN 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P AA+ M + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>gi|195941853|ref|ZP_03087235.1| 30S ribosomal protein S6 [Borrelia burgdorferi 80a]
gi|216264520|ref|ZP_03436512.1| 30S ribosomal protein S6 [Borrelia burgdorferi 156a]
gi|221217359|ref|ZP_03588830.1| 30S ribosomal protein S6 [Borrelia burgdorferi 72a]
gi|224534002|ref|ZP_03674586.1| 30S ribosomal protein S6 [Borrelia burgdorferi CA-11.2a]
gi|225549300|ref|ZP_03770273.1| 30S ribosomal protein S6 [Borrelia burgdorferi 94a]
gi|225549864|ref|ZP_03770826.1| 30S ribosomal protein S6 [Borrelia burgdorferi 118a]
gi|215980993|gb|EEC21800.1| 30S ribosomal protein S6 [Borrelia burgdorferi 156a]
gi|221192637|gb|EEE18853.1| 30S ribosomal protein S6 [Borrelia burgdorferi 72a]
gi|224512838|gb|EEF83205.1| 30S ribosomal protein S6 [Borrelia burgdorferi CA-11.2a]
gi|225369555|gb|EEG99006.1| 30S ribosomal protein S6 [Borrelia burgdorferi 118a]
gi|225370158|gb|EEG99598.1| 30S ribosomal protein S6 [Borrelia burgdorferi 94a]
gi|312148135|gb|ADQ30794.1| 30S ribosomal protein S6 [Borrelia burgdorferi JD1]
gi|312149097|gb|ADQ29168.1| 30S ribosomal protein S6 [Borrelia burgdorferi N40]
Length = 139
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|15829082|ref|NP_326442.1| 30S ribosomal protein S6 [Mycoplasma pulmonis UAB CTIP]
gi|24212329|sp|Q98PV8|RS6_MYCPU RecName: Full=30S ribosomal protein S6
gi|14090026|emb|CAC13784.1| 30S RIBOSOMAL PROTEIN S6 [Mycoplasma pulmonis]
Length = 150
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQE-NGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE V +L + I + QSL++ V +L +AY I K++ A
Sbjct: 1 MNKYEIVIMLDP-------AENIEKAQSLLKSTFKSGVEKFEKLEFTKLAYEINKSKVAQ 53
Query: 60 YVFMNIASPP-AAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPR 118
YV + S I+E RK I + R + + + S + +
Sbjct: 54 YVLAIVNSQGKEEINEFVRKANITKTFWRHMIINLTSEKGINKPAKPKKTFKKTFVARKF 113
Query: 119 DRNVDRKQHVSEE 131
R+ + K H +EE
Sbjct: 114 SRDDESKTHSTEE 126
>gi|225552075|ref|ZP_03773015.1| 30S ribosomal protein S6 [Borrelia sp. SV1]
gi|225371073|gb|EEH00503.1| 30S ribosomal protein S6 [Borrelia sp. SV1]
Length = 139
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|224531549|ref|ZP_03672181.1| 30S ribosomal protein S6 [Borrelia valaisiana VS116]
gi|224511014|gb|EEF81420.1| 30S ribosomal protein S6 [Borrelia valaisiana VS116]
Length = 141
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDIVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|203287582|ref|YP_002222597.1| 30S ribosomal protein S6 [Borrelia recurrentis A1]
gi|226703428|sp|B5RQU2|RS6_BORRA RecName: Full=30S ribosomal protein S6
gi|201084802|gb|ACH94376.1| 30S ribosomal protein S6 [Borrelia recurrentis A1]
Length = 134
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL R + K + + + + G + N +G R + Y +RK + Y
Sbjct: 3 KKYEGCFLFRS--EELEYKSALEEVKKQLVAFGAVDFVENSIGERALEYPVRKQLRGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+ + E++ ++++ +N+LR + L+ + + S +R+ R+ R+++ +++
Sbjct: 61 IIEFKMASDNLRELEAQLKLIKNLLRYMILVKINRKVSVKKVKRRNFREYRDNKDIKEKE 120
Query: 122 VDRKQHVS 129
+ +V
Sbjct: 121 QPSESNVD 128
>gi|225705986|gb|ACO08839.1| Mitochondrial 28S ribosomal protein S6 [Osmerus mordax]
Length = 119
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M YE +++ + + T+ + + E G VR + LG R + Y I ++ + +
Sbjct: 1 MPRYELALIVKA-MQRPETAATLRRTVETLMERGAIVRGLENLGERLLPYNISEHDERHA 59
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
Y ++ + PA I + + D +V+R L D
Sbjct: 60 RGGYFLLDFHAAPAIIPGLLNHLHRDVDVIRPTVLKND 97
>gi|146416009|ref|XP_001483974.1| hypothetical protein PGUG_03355 [Meyerozyma guilliermondii ATCC
6260]
Length = 122
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 4 YEHVFL---LRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + + L +++ K + LI N G +R V +G R + I K +
Sbjct: 3 YELLAISRILDPQQMAKEAKKIVSTIGKLILNNRGVIRDVTSMGPRVLPKVISKDQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-SHEQSPTLTIQR 106
+ Y+ M + E+ R +R D VLR+ + D +++ SP + QR
Sbjct: 63 QGYHFLMGFDVSSSVQQELLRTLRRDPRVLRANIIRHDLANKLSPGTSYQR 113
>gi|226320693|ref|ZP_03796251.1| 30S ribosomal protein S6 [Borrelia burgdorferi 29805]
gi|226233909|gb|EEH32632.1| 30S ribosomal protein S6 [Borrelia burgdorferi 29805]
Length = 139
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKG--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|195337443|ref|XP_002035338.1| GM14653 [Drosophila sechellia]
gi|194128431|gb|EDW50474.1| GM14653 [Drosophila sechellia]
Length = 147
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+ + + + P I ++K + D +++R V+ E+ P
Sbjct: 60 EGTHFTIAFDTAPMKIADLKEEFGRDIDIIRRYIFKVEESEKKP 103
>gi|218249203|ref|YP_002374643.1| 30S ribosomal protein S6 [Borrelia burgdorferi ZS7]
gi|226703423|sp|B7J148|RS6_BORBZ RecName: Full=30S ribosomal protein S6
gi|218164391|gb|ACK74452.1| 30S ribosomal protein S6 [Borrelia burgdorferi ZS7]
Length = 139
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E + ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKEFESRLKLIKNLLRYMIL 90
>gi|70948501|ref|XP_743751.1| 30S ribosomal protein S6-like protein [Plasmodium chabaudi
chabaudi]
gi|56523402|emb|CAH77926.1| 30S ribosomal protein S6-like protein, putative [Plasmodium
chabaudi chabaudi]
Length = 164
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
+IK + +Y ++ + + +G R + I+K +AYY+ + P+ I E+
Sbjct: 57 EIKKKLSEYIHELKLIHAQNFKIVYMGKRRLVRPIKKQFEAYYILFSFEVYPSLIREISD 116
Query: 78 KMRIDENVLRSLTLLVDSHEQS 99
K+R E++LR + D ++
Sbjct: 117 KLRSQEHILRLMITK-DEYKTK 137
>gi|223889186|ref|ZP_03623775.1| 30S ribosomal protein S6 [Borrelia burgdorferi 64b]
gi|226321974|ref|ZP_03797499.1| 30S ribosomal protein S6 [Borrelia burgdorferi Bol26]
gi|223885435|gb|EEF56536.1| 30S ribosomal protein S6 [Borrelia burgdorferi 64b]
gi|226232564|gb|EEH31318.1| 30S ribosomal protein S6 [Borrelia burgdorferi Bol26]
Length = 139
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E + ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKEFESRLKLIKNLLRYMIL 90
>gi|224532928|ref|ZP_03673538.1| 30S ribosomal protein S6 [Borrelia burgdorferi WI91-23]
gi|224512127|gb|EEF82518.1| 30S ribosomal protein S6 [Borrelia burgdorferi WI91-23]
Length = 139
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKG--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|189199874|ref|XP_001936274.1| 37S ribosomal protein Mrp17 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983373|gb|EDU48861.1| 37S ribosomal protein Mrp17 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 112
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NRKA 58
LYE + ++R S+ +K+ ++ + G VR V+ G + +K +
Sbjct: 2 LYEMIGVVRPGRLSE-VKEIAKTAGKIVLDQQGVVRGVSNWGTFLLPKPAKKLQSTHHYG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + A H ++R M +D ++R + +
Sbjct: 61 HHFIMRFDASARAQHALRRTMSLDPRLIRYSIVKM 95
>gi|195491741|ref|XP_002093693.1| GE21441 [Drosophila yakuba]
gi|194179794|gb|EDW93405.1| GE21441 [Drosophila yakuba]
Length = 147
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + + + P I ++K + D +++R V+ EQ
Sbjct: 60 EGTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQK 102
>gi|15594461|ref|NP_212249.1| 30S ribosomal protein S6 [Borrelia burgdorferi B31]
gi|3914922|sp|O51142|RS6_BORBU RecName: Full=30S ribosomal protein S6
gi|2687988|gb|AAC66491.1| ribosomal protein S6 (rpsF) [Borrelia burgdorferi B31]
Length = 139
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E + ++++ N+LR + L
Sbjct: 61 IIEFSMEGNNLKEFESRLKLIRNLLRYMIL 90
>gi|15705149|gb|AAL03955.1| 28S ribosomal protein S6 precursor [Spodoptera frugiperda]
Length = 150
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LR + ++K T+ + I + GG +R + LG R + Y+ + R
Sbjct: 1 MPTYEVALMLR-SMPKPELKTTLKRISHAIFDRGGIIRNIENLGHRPMPYKTSAHGLVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+A Y I + A+ ++K + D +V+R +
Sbjct: 60 EANYFVFKIDTATKAVSDLKEEYSRDVDVIRQRVFKCEE 98
>gi|302782710|ref|XP_002973128.1| hypothetical protein SELMODRAFT_99143 [Selaginella moellendorffii]
gi|300158881|gb|EFJ25502.1| hypothetical protein SELMODRAFT_99143 [Selaginella moellendorffii]
Length = 123
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M LY+ + + + + + D + + + + G V V G + +AY I+K +
Sbjct: 1 MPLYDVFVIFKPLVERKVMTDILVRIGHKVYQQKGVVTNVKYFGRQFLAYDIKKRDGRHY 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL------VDSHE-QSPTLTIQRHD 108
+ + + M + + A +++ + DE +LR L + +D+ + + P++ +Q D
Sbjct: 61 EGHLMQMTVMAATAFNEQLQY-LNNDERLLRWLLIKNRGTKWMDALQGKLPSVDVQDED 118
>gi|219685304|ref|ZP_03540123.1| 30S ribosomal protein S6 [Borrelia garinii Far04]
gi|219673077|gb|EED30097.1| 30S ribosomal protein S6 [Borrelia garinii Far04]
Length = 139
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVRKSLEFFGATDVVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ ++++ +N+LR + L
Sbjct: 61 IIEFNMESNNLKELESRLKLIKNLLRYMIL 90
>gi|74001414|ref|XP_852396.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S6
(S6mt) (MRP-S6) [Canis familiaris]
Length = 124
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG R + YRI +++
Sbjct: 1 MPRYELALILKA-MQRPETAAALKRTLEALMDRGAIVRHLENLGDRALPYRISAHNQRHV 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P A+ + + D +V+R +
Sbjct: 60 RGGYFLVDFYAPATAVESIMEHLSRDVDVIRPNVIR 95
>gi|219684767|ref|ZP_03539709.1| 30S ribosomal protein S6 [Borrelia garinii PBr]
gi|219671712|gb|EED28767.1| 30S ribosomal protein S6 [Borrelia garinii PBr]
Length = 139
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVRKSLEFFGATDIVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + E++ ++++ +N+LR + L
Sbjct: 61 IIEFNMESNNLKELESRLKLIKNLLRYMIL 90
>gi|190347047|gb|EDK39257.2| hypothetical protein PGUG_03355 [Meyerozyma guilliermondii ATCC
6260]
Length = 122
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + + R +++ K + LI N G +R V +G R + I K +
Sbjct: 3 YELLAISRISDPQQMAKEAKKIVSTIGKLILNNRGVIRDVTSMGPRVLPKVISKDQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-SHEQSPTLTIQR 106
+ Y+ M + E+ R +R D VLR+ + D +++ SP + QR
Sbjct: 63 QGYHFLMGFDVSSSVQQELLRTLRRDPRVLRANIIRHDLANKLSPGTSYQR 113
>gi|111114937|ref|YP_709555.1| 30S ribosomal protein S6 [Borrelia afzelii PKo]
gi|216263969|ref|ZP_03435963.1| 30S ribosomal protein S6 [Borrelia afzelii ACA-1]
gi|122956426|sp|Q0SP49|RS6_BORAP RecName: Full=30S ribosomal protein S6
gi|110890211|gb|ABH01379.1| ribosomal protein S6 [Borrelia afzelii PKo]
gi|215980013|gb|EEC20835.1| 30S ribosomal protein S6 [Borrelia afzelii ACA-1]
Length = 139
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKGSLEEVKKSLELYGATDIISNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E + K+++ +++LR + L
Sbjct: 61 IIEFSMEGNNLKEFESKLKLIKSLLRYMIL 90
>gi|294464375|gb|ADE77700.1| unknown [Picea sitchensis]
Length = 158
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + LL+ + I + + + + G V + G + Y I+K +Y
Sbjct: 1 MPLYDCMLLLKPKVERTAIIELVARLGRRVHSLNGVVTDIKSFGKVYLGYGIKKLDGRFY 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ M + P E++ + D+ +LR L +
Sbjct: 61 QGQMMQMTMMVTPKFPKELEY-LNKDDRLLRWLLVK 95
>gi|154281123|ref|XP_001541374.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411553|gb|EDN06941.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 158
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKN----RKAYYV 61
++L+R + + I + L I +GG +R + G + I K+ ++
Sbjct: 31 LYLVRPGSVQEVRE--IARITGLQILYSGGVIRGLTNWGPFRLPRPITKHQTKYSTGHHF 88
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
M S A ++R + +D ++R + + + +
Sbjct: 89 IMRFDSSSAVQQSVRRTLGLDPRMIRFSVVKLGNKLEE 126
>gi|116191195|ref|XP_001221410.1| hypothetical protein CHGG_05315 [Chaetomium globosum CBS 148.51]
gi|88181228|gb|EAQ88696.1| hypothetical protein CHGG_05315 [Chaetomium globosum CBS 148.51]
Length = 1375
Score = 54.6 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 3 LYEHVFLLRQ-DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNRK 57
LYE + ++R ++ +K+ + LI GG +R V G+ + + ++ +
Sbjct: 1262 LYEMIGIVRPGNLKE--VKEIVLTAGQLILRQGGVIRDVANWGVFHLPRAVSLNQTRHVR 1319
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y + + A ++ R +R+D V+RS + +
Sbjct: 1320 GHYFVLRYDAGVATHQDVARTLRVDPRVIRSGGVKL 1355
>gi|115435334|ref|NP_001042425.1| Os01g0220300 [Oryza sativa Japonica Group]
gi|8096641|dbj|BAA96212.1| unknown protein [Oryza sativa Japonica Group]
gi|113531956|dbj|BAF04339.1| Os01g0220300 [Oryza sativa Japonica Group]
gi|215740466|dbj|BAG97122.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 54.6 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M LY+ + L++ ++ + + + +G+ + G V V G + Y I+K +
Sbjct: 1 MPLYDCMLLVKPLVTREAMAELVGRVARRAYQRNGVVTDVKSFGTICLGYGIKKLDGRHF 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
K + M + PP+ E+ + ++ +LR L + + R + D
Sbjct: 61 KGQLMQMTMMVPPSFTQEL-HYLNKEDRLLRWLVVKHRDAVYGVEFINEDDGRREMTDFR 119
Query: 117 PRDRN 121
R ++
Sbjct: 120 YRTKD 124
>gi|156848987|ref|XP_001647374.1| hypothetical protein Kpol_1018p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156118060|gb|EDO19516.1| hypothetical protein Kpol_1018p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 129
Score = 54.6 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----N 55
LYE + ++R +++++ K+ LI N G VR ++ +G + I+K +
Sbjct: 2 LYELIGIVRVMNPVVANKEAKELATTIGKLIINNRGVVRKISPMGTSPLPKIIKKDEEQH 61
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD---SHEQSPTL 102
+ Y M + E+ R ++ D V+RS + VD + +P++
Sbjct: 62 FQGYQFMMLFDASVGVQSEILRTLKNDPRVIRSSIIKVDTTKELDVAPSI 111
>gi|50422585|ref|XP_459864.1| DEHA2E12826p [Debaryomyces hansenii CBS767]
gi|49655532|emb|CAG88105.1| DEHA2E12826p [Debaryomyces hansenii]
Length = 120
Score = 54.6 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + + R ++++ + LI N G +R + LG RT+ + K +
Sbjct: 3 YELMAISRISDPLKTNKEATKIVSTLGKLILNNRGIIRDITSLGPRTLPKIVSKDQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ Y+ M E+ R +R D VLR+ + D
Sbjct: 63 QGYHFLMGFDVSSNVQQELLRTLRRDPRVLRANIIKQD 100
>gi|119495541|ref|XP_001264553.1| 37S ribosomal protein Mrp17 [Neosartorya fischeri NRRL 181]
gi|119412715|gb|EAW22656.1| 37S ribosomal protein Mrp17 [Neosartorya fischeri NRRL 181]
Length = 121
Score = 54.6 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + +GG VR G + K+
Sbjct: 2 LYELIAVVRPG-SLNEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTDG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + A ++R + +D ++R + + D E+
Sbjct: 61 HHFIMRFDASGAVQSAVRRTLGLDPRMIRFSVVKLGDKLEE 101
>gi|195014835|ref|XP_001984086.1| GH15198 [Drosophila grimshawi]
gi|193897568|gb|EDV96434.1| GH15198 [Drosophila grimshawi]
Length = 147
Score = 54.6 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIKRTAEAIFDKGGIIRKLENLGTRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+A + + + P I ++K + D +++R V+ E+
Sbjct: 60 EATHFTITFDTAPTKISDLKEEFGRDIDIIRRYIFRVEEPEE 101
>gi|260945913|ref|XP_002617254.1| hypothetical protein CLUG_02698 [Clavispora lusitaniae ATCC
42720]
gi|238849108|gb|EEQ38572.1| hypothetical protein CLUG_02698 [Clavispora lusitaniae ATCC
42720]
Length = 120
Score = 54.2 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + R ++S++ LI N G +R + LG + + + K +
Sbjct: 3 YELFAIARISDPVLASKEASKIASTVGKLILNNRGVIREITSLGPKPLPKIMSKEQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y+ M S A E+ R +R D +LRS +
Sbjct: 63 QGYHFMMGFDSSSAVQQELLRTLRRDPRILRSSIIK 98
>gi|255732079|ref|XP_002550963.1| mitochondrial 40S ribosomal protein MRP17 [Candida tropicalis
MYA-3404]
gi|240131249|gb|EER30809.1| mitochondrial 40S ribosomal protein MRP17 [Candida tropicalis
MYA-3404]
Length = 120
Score = 54.2 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + R S++ LI N G +R ++ LG R + I K +
Sbjct: 3 YELFAIARITDPLNVSREASKIASTVGKLILNNRGVIRDISSLGARPLPKIISKEQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ Y+ M P ++ R +R D +LRS + D
Sbjct: 63 QGYHFIMGFDCSPNVQTQLLRTLRRDPRILRSSIMKHD 100
>gi|302789920|ref|XP_002976728.1| hypothetical protein SELMODRAFT_105261 [Selaginella moellendorffii]
gi|300155766|gb|EFJ22397.1| hypothetical protein SELMODRAFT_105261 [Selaginella moellendorffii]
Length = 123
Score = 54.2 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M LY+ + + + + + D + + + + G V V G + +AY I+K +
Sbjct: 1 MPLYDVFVIFKPLVERKVMTDILVRIGHKVYQQKGVVTDVKYFGRQFLAYDIKKRDGRHY 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL------VDSHE-QSPTLTIQRHD 108
+ + + M + + A +++ + DE +LR L + +D+ + + P++ +Q D
Sbjct: 61 EGHLMQMTVMAATAFNEQLQY-LNNDERLLRWLLIKNRGTKWMDALQGKLPSVDVQDED 118
>gi|225682880|gb|EEH21164.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 181
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
LYE + ++R + + I + L I GG +R + G + K++
Sbjct: 48 LYELIAVVRPGSLQEVRE--IARVTGLQILYGGGVIRGLTNWGPFRLPRPTTKHQTKYAT 105
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
Y+ M S A ++R + +D ++R + + +
Sbjct: 106 GYHFIMRFDSSSAVQKSVRRTLGLDPRMIRFSVVKLGEKLE 146
>gi|145354889|ref|XP_001421707.1| Plastid ribosomal protein S6 small ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
gi|144581945|gb|ABP00001.1| Plastid ribosomal protein S6 small ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
Length = 136
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEV--RLVNELGMRTIAYRIRKNRKAY 59
YE V LLR D T+ ++++ E G V G++ +Y I+ AY
Sbjct: 40 NSYEGVMLLRPDCDDATRATTMDDFKAMFGE--GLVAWEQTEH-GLKPNSYEIKGYPDAY 96
Query: 60 YVFMNIASPPAAIH----EMKR-KMRIDENVLRSLTLLV 93
V +N PA E+ R + +E VLR++ +
Sbjct: 97 QVVVNFTCAPAVFKAASEELARPAVGSEEVVLRTMFMKT 135
>gi|45185232|ref|NP_982949.1| ABR003Wp [Ashbya gossypii ATCC 10895]
gi|44980890|gb|AAS50773.1| ABR003Wp [Ashbya gossypii ATCC 10895]
Length = 130
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----- 54
LYE V + R + K L+ EN G VR + +G + + RI+K
Sbjct: 2 LYELVSIARVTNPLAVHAEAKQLATTIGKLVIENRGVVRKIIPIGNKLLP-RIQKKDQER 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ + Y+ M S E+ R +R D VLR+ + VD
Sbjct: 61 HFQGYHFLMLFDSSAPVQSEILRTLRSDPRVLRASIMKVD 100
>gi|255565089|ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223537244|gb|EEF38876.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 162
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + LL+ I + + D + + +Q G + + G + Y I+K Y+
Sbjct: 1 MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
+ M + + P E+ + ++ +LR L + + + + + N
Sbjct: 61 QGQLMQMTMMATPNINKEL-HYLNKEDRLLRWLLVKHRDTKYGLDFMDENDGKGELNKLS 119
Query: 117 PRDRNVD 123
P VD
Sbjct: 120 PSKYWVD 126
>gi|82538747|ref|XP_723806.1| ribosomal protein S6 [Plasmodium yoelii yoelii str. 17XNL]
gi|23478227|gb|EAA15371.1| ribosomal protein S6, putative [Plasmodium yoelii yoelii]
Length = 252
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
+IK + +Y ++ + + +G R + I+K +AYY+ + P+ I E+
Sbjct: 114 EIKKKLSEYIYELKLIHAQNFKIVYMGKRRLVRPIKKQFEAYYILFSFEVYPSIIREISN 173
Query: 78 KMRIDENVLR 87
K+R +++LR
Sbjct: 174 KLRSQDHILR 183
>gi|312216517|emb|CBX96467.1| similar to 37S ribosomal protein Mrp17 [Leptosphaeria maculans]
Length = 112
Score = 53.5 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NRKA 58
LYE + ++R S+ +K+ ++ + G VR V G + + +K +
Sbjct: 2 LYEMIGVVRPGRLSE-VKEIARTAGKIVLDARGVVRGVTNWGTFLLPHPAKKLQSTHHYG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
++ M + A H +++ M +D ++R + +
Sbjct: 61 HHFIMRFDASARAQHTLRKTMSLDPRLIRYSIVKM 95
>gi|321309533|ref|YP_004191862.1| 30S ribosomal protein S6 [Mycoplasma haemofelis str. Langford 1]
gi|319801377|emb|CBY92023.1| ribosomal protein S6 [Mycoplasma haemofelis str. Langford 1]
Length = 132
Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQ---ENGGEVRLVNELGMRTIAYRIRKNRK 57
M YE + ++ +S + I SL + +V + +AY I+K +
Sbjct: 1 MSKYEIMIVVDGRLSEPDARLNISNLISLFETLPNYEEKVIFKDN-----LAYPIKKTKV 55
Query: 58 AYYVFMNIASPP-AAIHEMKRKMRIDENVLRSLTL 91
+ +N + + E R +++++LR L +
Sbjct: 56 GHRFILNFDLEDVSVLAEFNRLALLNKHILRHLVI 90
>gi|303272275|ref|XP_003055499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463473|gb|EEH60751.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 150
Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE +FL++ + + + +S+ E G V + G+ T AY I+ ++ +
Sbjct: 56 YEALFLMKPGVEDSVRAAEVDKLRSMFAEGGSTEFEVTDRGLVTNAYEIKGFADSHQYMI 115
Query: 64 NIASPPAAIHEMKRKM-----RIDENVLRSLTLL 92
++ P + +++ ++ +E +LR +
Sbjct: 116 HVNCPRGTVKKVQDELAKPLIGAEEIILRYMFFK 149
>gi|70995638|ref|XP_752574.1| 37S ribosomal protein Mrp17 [Aspergillus fumigatus Af293]
gi|66850209|gb|EAL90536.1| 37S ribosomal protein Mrp17 [Aspergillus fumigatus Af293]
gi|159131329|gb|EDP56442.1| 37S ribosomal protein Mrp17 [Aspergillus fumigatus A1163]
Length = 121
Score = 53.5 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + +GG VR G + K+
Sbjct: 2 LYELIAVVRPG-SLNEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTDG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E+
Sbjct: 61 HHFIMRFDASGPVQSAVRRTLSLDPRMIRFSVVKLGDKLEE 101
>gi|325188212|emb|CCA22753.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 198
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
M LY+ V L + + +Q+ + ++I NGG +R + G R + Y I+ R
Sbjct: 1 MPLYKQVLLTSRKATPKQVAKIFQECANIITLNGGVIRGIENRGERRLGYGIKDRRWGEL 60
Query: 59 --YY----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y + S + ++ +K++ ++R T +
Sbjct: 61 QCHYDAKLIVSQFNSTSDVLKQIDKKLKNSFCIIRYGTFQI 101
>gi|294955934|ref|XP_002788753.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904294|gb|EER20549.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 136
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI------RK 54
M Y FL+ ++++ +++ + + + N G V +LG R + Y + RK
Sbjct: 1 MPFYRTYFLVHNEVTNHELRCLVKEMARAVTNNRGVVFSFEDLGWRNLPYFLLKQGYRRK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ MN + PA+ + ++ R + +LR T V +
Sbjct: 61 FFYGRWFTMNFGAHPASWNAIEEIGRHNTGILRLSTEKVTPY 102
>gi|195375418|ref|XP_002046498.1| GJ12460 [Drosophila virilis]
gi|194153656|gb|EDW68840.1| GJ12460 [Drosophila virilis]
Length = 147
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIKRTAEAIFDKGGIIRKFENLGTRALPFKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+A + + + P + ++K + D +++R V+ E
Sbjct: 60 EATHFTITFDTAPTKLSDLKEEFGRDIDIIRRYIFKVEEPED 101
>gi|121701595|ref|XP_001269062.1| 37S ribosomal protein Mrp17 [Aspergillus clavatus NRRL 1]
gi|119397205|gb|EAW07636.1| 37S ribosomal protein Mrp17 [Aspergillus clavatus NRRL 1]
Length = 163
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + +GG VR G + K+
Sbjct: 44 LYELIAVVRPG-SLNEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTDG 102
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E
Sbjct: 103 HHFIMRFDASGPVQSAVRRTLGLDPRMIRFSVVKLGDKLED 143
>gi|330720459|gb|EGG98766.1| SSU ribosomal protein S6p [gamma proteobacterium IMCC2047]
Length = 83
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%)
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
MNI A+ E+ + ++ V+R+L + + + R+ R++
Sbjct: 2 LMNIECNQEALDELNYLFKFNDAVIRNLVITTKEAVTVASPIMASASRETRSE 54
>gi|195135143|ref|XP_002011994.1| GI16716 [Drosophila mojavensis]
gi|193918258|gb|EDW17125.1| GI16716 [Drosophila mojavensis]
Length = 147
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIKRTAEAIFDKGGIIRKFENLGTRPLPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+A + + S P + ++K + D +++R V+ E+
Sbjct: 60 EATHFTITFDSAPTKLSDLKEEFGRDIDIIRRNIFKVEEPEE 101
>gi|294898772|ref|XP_002776367.1| cdp-diacylglycerol--serine o-phosphatidyltransferase, putative
[Perkinsus marinus ATCC 50983]
gi|239883305|gb|EER08183.1| cdp-diacylglycerol--serine o-phosphatidyltransferase, putative
[Perkinsus marinus ATCC 50983]
Length = 615
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI------RK 54
M Y FL+ ++++ +++ + + + N G V +LG R + Y + RK
Sbjct: 473 MPFYRTYFLVHNEVTNHELRCLVKEMARAVTNNRGVVFSFEDLGWRNLPYFLLKQGYRRK 532
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSH 96
+ MN + PA+ + ++ R + +LR T V +
Sbjct: 533 FFYGRWFTMNFGAHPASWNAIEEIGRHNTGILRLSTEKVTPY 574
>gi|281500592|pdb|2KJW|A Chain A, Solution Structure And Backbone Dynamics Of The
Permutant P54-55
Length = 96
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK 54
YE +L ++ Q+ Q ++ G V V ELG+R +AY I K
Sbjct: 46 YEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAK 96
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 22/35 (62%)
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ Y+++ + P ++++ R++RI +NV R + +
Sbjct: 4 QGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVV 38
>gi|13620887|dbj|BAB40996.1| mitochondrial ribosomal protein S6 [Mus musculus]
Length = 163
Score = 52.7 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG R + YRI +++
Sbjct: 39 MPRYELALILKA-MRRPETAAALKRTIESLMDRGAIVRNLESLGERALPYRISSHSQQHS 97
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P +A+ + + D +V+R +
Sbjct: 98 RGGYFLVDFYAPTSAVENILEHLARDIDVVRPNIVK 133
>gi|226290330|gb|EEH45814.1| 37S ribosomal protein Mrp17 [Paracoccidioides brasiliensis Pb18]
Length = 135
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKNRK---- 57
LYE + ++R + + I + L I GG +R + G + K++
Sbjct: 2 LYELIAVVRPGSLQEVRE--IARVTGLQILYGGGVIRGLTNWGPFRLPRPTTKHQTKYAT 59
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
Y+ M S A ++R + +D ++R + + +
Sbjct: 60 GYHFIMRFDSSSAVQKSVRRTLGLDPRMIRFSVVKLGEKLE 100
>gi|225559597|gb|EEH07879.1| 37S ribosomal protein Mrp17 [Ajellomyces capsulatus G186AR]
Length = 132
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKN---- 55
M E L+R + + I + L I +GG +R + G + I K+
Sbjct: 1 MPTSEI--LVRPGSVQEVRE--IARITGLQILYSGGVIRGLTNWGPFRLPRPITKHQTKY 56
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
++ M S A ++R + +D ++R + + + +
Sbjct: 57 STGHHFIMRFDSSSAVQQSVRRTLGLDPRMIRFSVVKLGNKLEE 100
>gi|170042285|ref|XP_001848862.1| mitochondrial 28S ribosomal protein S6 [Culex quinquefasciatus]
gi|167865791|gb|EDS29174.1| mitochondrial 28S ribosomal protein S6 [Culex quinquefasciatus]
Length = 137
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKAYYVFMNIASPPAAIH 73
++ + + + I + GG +R ++ LG + + ++ + R Y + +PPA +
Sbjct: 5 ELISVLKRTATAIFDKGGVIRKLDNLGTKPLPFKTSVHGLVHRTGSYFVVKFDTPPATVE 64
Query: 74 EMKRKMRIDENVLRSLTLLVDSHEQSP 100
+++ + D +++R D+ Q P
Sbjct: 65 DLEEEYGRDVDIIRKRIYKADAALQEP 91
>gi|150866538|ref|XP_001386177.2| mitochondrial ribosomal protein [Scheffersomyces stipitis CBS 6054]
gi|149387794|gb|ABN68148.2| mitochondrial ribosomal protein [Scheffersomyces stipitis CBS 6054]
Length = 121
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + R +S++ K + LI N G +R + +G R + + K +
Sbjct: 3 YELFAIARITDPVQTSKEAKKIVSTIGKLILNNRGIIRDITSMGARPLPKIMSKEQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ Y+ M ++ R +R D +LR+ + D
Sbjct: 63 QGYHFLMGFDVSATVQSQLLRTLRSDPRILRANVVKHD 100
>gi|51598378|ref|YP_072566.1| 30S ribosomal protein S6 [Borrelia garinii PBi]
gi|61215486|sp|Q662P7|RS6_BORGA RecName: Full=30S ribosomal protein S6
gi|51572949|gb|AAU06974.1| ribosomal protein S6 [Borrelia garinii PBi]
Length = 139
Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
K YE FL + + K ++ + + ++ G + N +G R + Y I+K + Y
Sbjct: 3 KRYEACFLFKS--EEIEYKCSLEEVRKSLEFFGAIDIVSNFIGERALEYPIKKQARGRYE 60
Query: 62 FMNIASPPAAIHEMKRKMRIDENVLRSLTL 91
+ + + E++ ++++ +N+LR + L
Sbjct: 61 IIEFSMEGNNLKELESRLKLIKNLLRYMIL 90
>gi|68478209|ref|XP_716846.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|68478330|ref|XP_716786.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|241955257|ref|XP_002420349.1| mitochondrial ribosomal protein, small subunit, putative [Candida
dubliniensis CD36]
gi|46438469|gb|EAK97799.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|46438531|gb|EAK97860.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|223643691|emb|CAX41425.1| mitochondrial ribosomal protein, small subunit, putative [Candida
dubliniensis CD36]
gi|238882454|gb|EEQ46092.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 119
Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 4 YEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
YE + R ++++ LI N G +R + LG + + I K +
Sbjct: 3 YELFAIARITDPLNTAKEATKIASTVGKLILNNRGIIRDITSLGAKPLPQIISKEQERHF 62
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD-SHEQSPTLTIQRHDRDDR 112
+ Y+ + S P ++ R +R D +LRS + D +H +P TI++ R +
Sbjct: 63 QGYHFIIGFDSSPNVQTQLLRTLRRDPRILRSSIMKHDLTHNLNPGTTIEQALRATK 119
>gi|217075210|gb|ACJ85965.1| unknown [Medicago truncatula]
Length = 145
Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M Y+ + L + ++ + + + + + + G V V G + Y ++K
Sbjct: 1 MPPYDCMLLFKPNVKKEALISLVARIGKHVCKRNGVVTEVKSFGTVQLGYGVKKRDGRFY 60
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ + +++ + P E+ + ++ +LR L +
Sbjct: 61 QGQMMQVSMMATPEINKEL-HYLNKEDKLLRWLLVKQ 96
>gi|56757455|gb|AAW26895.1| SJCHGC07338 protein [Schistosoma japonicum]
gi|226466640|emb|CAX69455.1| Mitochondrial 28S ribosomal protein S6 [Schistosoma japonicum]
Length = 135
Score = 51.9 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTI--AYRIRKNR-- 56
M YE +++ + + IK + ++ + ++G + V LG+R + + ++ R
Sbjct: 1 MIRYEMSLIIKA-LGTPGIKAALKRHLKGMLDSGAHLFNVENLGLRRLPNVFHVQGERQY 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR-SLTLLVDSHEQSPTLTIQRHDRDDRND- 114
+ +Y +N +P ++++M++ D ++++ +L D P T+ R + +
Sbjct: 60 EGHYFLINFNAPHDSLNQMRKMANKDSDIIKCFASLKDDGWV--PPCTMPDAARCEFGEI 117
Query: 115 RFPRDRNVDRKQH 127
R P R++H
Sbjct: 118 RNPNYEKTARRRH 130
>gi|149059867|gb|EDM10750.1| rCG58764 [Rattus norvegicus]
Length = 125
Score = 51.9 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG R + YRI +++
Sbjct: 1 MPRYELALILKA-MRRPETAAALKRTIESLMDRGAIVRNLENLGERALPYRISSHSQQHS 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P A+ M + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTNAVESMLEHLARDTDVVRPNIVK 95
>gi|301116737|ref|XP_002906097.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109397|gb|EEY67449.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 194
Score = 51.9 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 8/101 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-- 58
M LY+ V L + + SLI GG +R G + + Y I R
Sbjct: 1 MPLYKQVLLTNLKSPPKDVARVFQDCASLITSQGGVIRGTENRGEKRLGYGIEDRRWGAL 60
Query: 59 --YY----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+Y + + PA + E++ K++ ++R T +
Sbjct: 61 QRHYEGKLIVQQFNTSPAVLKEVEAKLKNSFPIIRFQTFKI 101
>gi|225463002|ref|XP_002264271.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 162
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M Y+ + LL+ ++ + + D + + + G + + G+ + Y I+K YY
Sbjct: 1 MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ M++ + P E+ + ++ +LR L +
Sbjct: 61 QGQLMQMSMMATPNFNKEL-HYLNKEDRLLRWLLVK 95
>gi|125977188|ref|XP_001352627.1| GA13435 [Drosophila pseudoobscura pseudoobscura]
gi|195168032|ref|XP_002024836.1| GL17892 [Drosophila persimilis]
gi|54641375|gb|EAL30125.1| GA13435 [Drosophila pseudoobscura pseudoobscura]
gi|194108266|gb|EDW30309.1| GL17892 [Drosophila persimilis]
Length = 147
Score = 51.6 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE +LRQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPSYELALVLRQ-LPRPELISVIRRTAEAILDKGGIIRKLENLGTRALPHKVSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + + P I ++K + D +++R V+ E+
Sbjct: 60 VGTHFTIAFDTAPTKISDLKEEFGRDIDIVRRYIFKVEEPEE 101
>gi|4220414|gb|AAD12413.1| Homology to ribosomal protein S6 X04022 [Mycoplasma genitalium]
Length = 75
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYV 61
Y + L+ +S +Q ++Q L+++ LG++ +AY I+K A+Y
Sbjct: 19 HYNIILLVDGTLSLEQANQVEQKHQKLLEK--ATEFKSEYLGLKELAYPIKKQLSAHYY 75
>gi|148887425|sp|Q4A5N1|RS6_MYCS5 RecName: Full=30S ribosomal protein S6
gi|144575157|gb|AAZ43940.2| 30S ribosomal protein S6 [Mycoplasma synoviae 53]
Length = 156
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIA 66
+ L+ S+ ++ + +S+ ++ + +L +AY I K + A Y +N+
Sbjct: 1 MVLVGPKTSASTVESFL---KSVFHDD---FKKAEKLERTELAYEINKTKHAQYFLVNLE 54
Query: 67 SPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTL--TIQRHDRDDRNDRFPRDRNVDR 124
+ I E R I++ + R L + +D+ + + T ++ D R+ R + +
Sbjct: 55 TERKNIAEFIRLSNINKEIWRHLVVNLDTEKGLNKVFKTHRKFGHDFRDQRSHHGQAGEF 114
Query: 125 KQHVSEEK 132
++ ++K
Sbjct: 115 RKREPQQK 122
>gi|145332631|ref|NP_001078181.1| ribosomal protein S6 family protein [Arabidopsis thaliana]
gi|332642622|gb|AEE76143.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
Length = 134
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + L + I + + D + + + G + + G + Y IRK +Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ + + P E+ + ++ +LR L +
Sbjct: 61 -QITMMTTPNMNKEL-HYLNKEDKLLRWLLVK 90
>gi|323308207|gb|EGA61456.1| Mrp17p [Saccharomyces cerevisiae FostersO]
Length = 131
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 LYEHVFLLRQDISSQ---QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RK 54
LYE + L+R S+ + K+ LI +N G VR + +G+R + +I K
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGKLIIQNRGVVRDIVPMGIRYLP-KIMKKDQEK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +AY+ M S A E+ R ++ D V+RS + VD
Sbjct: 61 HFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVD 100
>gi|6322850|ref|NP_012923.1| Mrp17p [Saccharomyces cerevisiae S288c]
gi|133127|sp|P28778|RT06_YEAST RecName: Full=37S ribosomal protein MRP17, mitochondrial; AltName:
Full=YmS16
gi|3974|emb|CAA41256.1| MRP17 [Saccharomyces cerevisiae]
gi|485975|emb|CAA81835.1| MRP17 [Saccharomyces cerevisiae]
gi|1515353|gb|AAB06941.1| Mrp17p [Saccharomyces cerevisiae]
gi|190409820|gb|EDV13085.1| ribosomal protein MRP17 [Saccharomyces cerevisiae RM11-1a]
gi|256271939|gb|EEU06960.1| Mrp17p [Saccharomyces cerevisiae JAY291]
gi|285813257|tpg|DAA09154.1| TPA: Mrp17p [Saccharomyces cerevisiae S288c]
gi|323304123|gb|EGA57901.1| Mrp17p [Saccharomyces cerevisiae FostersB]
gi|323332816|gb|EGA74221.1| Mrp17p [Saccharomyces cerevisiae AWRI796]
gi|323354129|gb|EGA85975.1| Mrp17p [Saccharomyces cerevisiae VL3]
Length = 131
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 LYEHVFLLRQDISSQ---QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RK 54
LYE + L+R S+ + K+ LI +N G VR + +G+R + +I K
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGKLIIQNRGVVRDIVPMGIRYLP-KIMKKDQEK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +AY+ M S A E+ R ++ D V+RS + VD
Sbjct: 61 HFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVD 100
>gi|327268571|ref|XP_003219070.1| PREDICTED: 28S ribosomal protein S6, mitochondrial-like [Anolis
carolinensis]
Length = 132
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIH 73
+ T+ + + E G VR + LG R + YRI + + Y ++ SP I
Sbjct: 27 ETAATLKRTVEALMERGAVVRNLENLGERALPYRITTHSEDHTRGGYFLVDFESPSTVIS 86
Query: 74 EMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDR 112
+K + D +V+RS L + + I + +D+
Sbjct: 87 SVKDHLGRDIDVIRSTVLKHHVTKTEECMGIVEENIEDK 125
>gi|254578058|ref|XP_002495015.1| ZYRO0B01430p [Zygosaccharomyces rouxii]
gi|238937905|emb|CAR26082.1| ZYRO0B01430p [Zygosaccharomyces rouxii]
Length = 129
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RK 54
LYE V ++R ++ + KD L+ +N G VR + +G + + +I K
Sbjct: 2 LYELVGIVRVMNPLAANAEAKDLATTIGKLVIQNRGVVRKIVPMGNKLLP-KIMKKDQEK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQ 98
+ + Y+ M S + E+ R ++ D V+RS +++ +Q
Sbjct: 61 HFQGYHFLMMFDSSASVQSEILRTLKNDPRVIRSSIAKMNTAKQ 104
>gi|307212198|gb|EFN88032.1| Probable 28S ribosomal protein S6, mitochondrial [Harpegnathos
saltator]
Length = 149
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M YE LLR + ++ T+ + I GG +R + G+ + Y+I +
Sbjct: 1 MPSYEMPLLLR-IMKKPELVATLKRTSETIFNTGGIIRKIENWGVTELPYKISIHNHLHS 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSP 100
+A + + +PP I + + R D +++R + V +H + P
Sbjct: 60 EANHFCIWFDAPPRLIEHIVDEGRRDIDIIR---IKVYNHLKPP 100
>gi|18401997|ref|NP_566618.1| ribosomal protein S6 family protein [Arabidopsis thaliana]
gi|9293899|dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana]
gi|21617981|gb|AAM67031.1| unknown [Arabidopsis thaliana]
gi|26451219|dbj|BAC42712.1| unknown protein [Arabidopsis thaliana]
gi|28827770|gb|AAO50729.1| unknown protein [Arabidopsis thaliana]
gi|332642621|gb|AEE76142.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
Length = 139
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + L + I + + D + + + G + + G + Y IRK +Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 --VFMNIAS--PPAAIHEMKRKMRIDENVLRSLTLL 92
M I P E+ + ++ +LR L +
Sbjct: 61 QGQLMQITMMTTPNMNKEL-HYLNKEDKLLRWLLVK 95
>gi|323336747|gb|EGA78011.1| Mrp17p [Saccharomyces cerevisiae Vin13]
gi|323347820|gb|EGA82084.1| Mrp17p [Saccharomyces cerevisiae Lalvin QA23]
Length = 131
Score = 51.2 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 LYEHVFLLRQDISSQ---QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RK 54
LYE + L+R S+ + K+ LI +N G VR + +G+R + +I K
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGKLIIQNRGVVRDIVPMGIRYLP-KIMKKDQEK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +AY+ M S A E+ R ++ D V+RS + VD
Sbjct: 61 HFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVD 100
>gi|151941543|gb|EDN59906.1| mitochondrial ribosomal small subunit component [Saccharomyces
cerevisiae YJM789]
gi|259147830|emb|CAY81080.1| Mrp17p [Saccharomyces cerevisiae EC1118]
Length = 131
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 LYEHVFLLRQDISSQ---QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI-----RK 54
LYE + L+R S+ + K+ LI +N G VR + +G+R + +I K
Sbjct: 2 LYELIGLVRITNSNAPKLEAKELSSTIGKLIIQNRGVVRDIVPMGIRYLP-KIMKKDQEK 60
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ +AY+ M S A E+ R ++ D V+RS + VD
Sbjct: 61 HFRAYHFLMLFDSSAAVQSEILRTLKKDPRVIRSSIVKVD 100
>gi|116779187|gb|ABK21174.1| unknown [Picea sitchensis]
Length = 163
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + LL+ + I + + + + G V + G + Y IRK YY
Sbjct: 1 MPLYDCMLLLKPQVERAAIVELLSRLGRRVYSLNGVVTDIKSFGKVYLGYGIRKLDGRYY 60
Query: 61 ----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ M + P E++ + D+ +LR L +
Sbjct: 61 QGQMMQMTMMVTPKFHKELEY-LNKDDKLLRWLLVK 95
>gi|195440268|ref|XP_002067964.1| GK11671 [Drosophila willistoni]
gi|194164049|gb|EDW78950.1| GK11671 [Drosophila willistoni]
Length = 147
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE + RQ + ++ I + I + GG +R + LG R + +++ ++ R
Sbjct: 1 MPTYELALVFRQ-LPRTELISVIKRTAEAILDKGGIIRKLENLGTRALPHKLSEHGVVHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
+ + S P I ++K + D +++R V+
Sbjct: 60 TGTHFTIAFDSAPTQISDLKEEFGRDIDIVRRYVFKVEE 98
>gi|255934062|ref|XP_002558312.1| Pc12g15090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582931|emb|CAP81136.1| Pc12g15090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 121
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + + +GG VR G + K+ +
Sbjct: 2 LYELIAIVRPG-SLNEVREIARNAGTQVIRSGGVVRGYTNWGAFRLPRVTTKHQARYTEG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M S + ++R + +D ++ + + D E+
Sbjct: 61 HHFIMRFDSSGSVQSSIRRTLGLDPRMINFSVVKLGDKLEE 101
>gi|68065746|ref|XP_674857.1| 30S ribosomal protein S6-like protein [Plasmodium berghei strain
ANKA]
gi|56493701|emb|CAH98730.1| 30S ribosomal protein S6-like protein, putative [Plasmodium
berghei]
Length = 164
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKR 77
+IK + +Y ++ + + +G R + I+K +AYY+ + P+ I ++
Sbjct: 57 EIKKKLSEYIYELKLVHAQNFKILYMGKRRLIRPIKKQFEAYYILFSFEVYPSIIRDIFN 116
Query: 78 KMRIDENVLRSLTLLVDSHEQS 99
K+R ++LR + D ++
Sbjct: 117 KLRSQNHILRLMITK-DEYKTK 137
>gi|317143064|ref|XP_001818871.2| 37S ribosomal protein Mrp17 [Aspergillus oryzae RIB40]
Length = 129
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + +GG VR G + K+ +
Sbjct: 10 LYELIAVVRPG-SLHEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTEG 68
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E
Sbjct: 69 HHFIMRFDASGPVQMAVRRTLGLDPRMVRFSVVKLGDKLED 109
>gi|193669314|ref|XP_001944636.1| PREDICTED: probable 28S ribosomal protein S6, mitochondrial-like
[Acyrthosiphon pisum]
Length = 152
Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE L + + +I + + S I E+GG +R ++ LG ++I + +
Sbjct: 1 MPSYELCLLFK-VLPRPEITQCLKRTASKIFESGGFIRRIDNLGTADTPWKISSHDAIHK 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+A Y + P +A+ + D ++++ V + P T+
Sbjct: 60 QASYFIVEFDVPSSAVDPFNNYLSRDIDIIKRTIFKVPENIPQPACTLHEE 110
>gi|90083350|dbj|BAE90757.1| unnamed protein product [Macaca fascicularis]
Length = 125
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG + + YR+ +++
Sbjct: 1 MPRYELALILKA-MQRPETAAALKRTIEALMDRGAIVRDLENLGEKALPYRMSAHNQQHN 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P + + + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTTTVESVVEHLSRDIDVIRGNIVK 95
>gi|297834792|ref|XP_002885278.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331118|gb|EFH61537.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + L + I + + D + + + G + + G + Y IRK +Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 --VFMNIAS--PPAAIHEMKRKMRIDENVLRSLTLL 92
M I P E+ + ++ +LR L +
Sbjct: 61 QGQLMQITMMTTPNMNKEL-HYLNKEDKLLRWLLVK 95
>gi|118380601|ref|XP_001023464.1| hypothetical protein TTHERM_00535550 [Tetrahymena thermophila]
gi|89305231|gb|EAS03219.1| hypothetical protein TTHERM_00535550 [Tetrahymena thermophila
SB210]
Length = 141
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR-----KN 55
M LYE + L R + +++ + I E GG VR LG R + ++ K+
Sbjct: 1 MPLYELIVLARAN-TAKATTSLVSSVAQSILEKGGNVRNTTILGDRILNRTVKGNDDKKH 59
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
YV + P + ++++ R +R+ T +
Sbjct: 60 LVGRYVQILYDGNPQMMGQIEKAARESNEGIRAKTFKIK 98
>gi|23956244|ref|NP_536704.1| 28S ribosomal protein S6, mitochondrial [Mus musculus]
gi|13959547|sp|P58064|RT06_MOUSE RecName: Full=28S ribosomal protein S6, mitochondrial;
Short=MRP-S6; Short=S6mt
gi|20071011|gb|AAH27271.1| Mitochondrial ribosomal protein S6 [Mus musculus]
gi|21391482|gb|AAL35740.1| mitochondrial ribosomal protein S6 [Mus musculus]
gi|74147741|dbj|BAE38738.1| unnamed protein product [Mus musculus]
gi|74191154|dbj|BAE39408.1| unnamed protein product [Mus musculus]
gi|74191176|dbj|BAE39418.1| unnamed protein product [Mus musculus]
gi|74225178|dbj|BAE38278.1| unnamed protein product [Mus musculus]
Length = 125
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE +L+ + + + + + + G VR + LG R + YRI +++
Sbjct: 1 MPRYELALILKA-MRRPETAAALKRTIESLMDRGAIVRNLESLGERALPYRISSHSQQHS 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+ Y ++ +P +A+ + + D +V+R +
Sbjct: 60 RGGYFLVDFYAPTSAVENILEHLARDIDVVRPNIVK 95
>gi|238498140|ref|XP_002380305.1| 37S ribosomal protein Mrp17 [Aspergillus flavus NRRL3357]
gi|83766729|dbj|BAE56869.1| unnamed protein product [Aspergillus oryzae]
gi|220693579|gb|EED49924.1| 37S ribosomal protein Mrp17 [Aspergillus flavus NRRL3357]
Length = 121
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKA 58
LYE + ++R S ++++ + +GG VR G + K+ +
Sbjct: 2 LYELIAVVRPG-SLHEVREIARNAGIQVLRSGGVVRGYTNWGTFRLPKPTTKHQARYTEG 60
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV-DSHEQ 98
++ M + ++R + +D ++R + + D E
Sbjct: 61 HHFIMRFDASGPVQMAVRRTLGLDPRMVRFSVVKLGDKLED 101
>gi|210075843|ref|XP_503364.2| YALI0E00220p [Yarrowia lipolytica]
gi|199426871|emb|CAG78943.2| YALI0E00220p [Yarrowia lipolytica]
Length = 105
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK----A 58
LYE V + + K + Q +I N G VRL+ + + ++ +K
Sbjct: 2 LYELVGIASVTPAHAAAKQAVTQIGRMIIGNRGVVRLIECWRFKPLPQIMKAQQKSYVVG 61
Query: 59 YYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS 95
Y +M P A E+ R ++ D ++R+ + ++
Sbjct: 62 DYFYMKFDCSPGAQGEIMRAVQADPRLIRTFCVKLNE 98
>gi|82752988|ref|XP_727496.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483367|gb|EAA19061.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 118
Score = 49.6 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA-Y 59
M LYE L + I +K+ + + ++ + G + +N+LG R A+ I+K + +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 Y----VFMNIASPPAAIHEMKRKMRIDENVL 86
Y + S +I ++ V+
Sbjct: 61 YFGRFYCITFYSNSKSIKDLNELFHKANFVI 91
>gi|255080120|ref|XP_002503640.1| predicted protein [Micromonas sp. RCC299]
gi|226518907|gb|ACO64898.1| predicted protein [Micromonas sp. RCC299]
Length = 137
Score = 49.2 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
YE V L++ + + + +++ E G V + G+ AY I+ ++ +
Sbjct: 42 YEAVILMKPGVEDSVRTAEVEKLKAMFMEGGATEFEVTDKGLVNNAYEIKGFADSHQYMI 101
Query: 64 NIASPPAAIHEM-----KRKMRIDENVLRSLTLL 92
+ P ++ + + +E VLR +
Sbjct: 102 HTQCPRGTAKKVQNYLDEPVIGQEEVVLRYMFFK 135
>gi|227885424|ref|ZP_04003229.1| possible 30s ribosomal protein S6 [Escherichia coli 83972]
gi|227837603|gb|EEJ48069.1| possible 30s ribosomal protein S6 [Escherichia coli 83972]
Length = 76
Score = 49.2 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 70 AAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRF 116
A ++E+ R ++ VLR+L + D + +L ++ +D++ D+
Sbjct: 1 AVLNELTESFRFNDAVLRNLVIKRDEADTEQSLIMKS--KDEKGDKP 45
>gi|326913270|ref|XP_003202962.1| PREDICTED: 28S ribosomal protein S6, mitochondrial-like
[Meleagris gallopavo]
Length = 118
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NRKAYYVFMNIASPPAAIH 73
+ + + + E G VR + LG R + Y+I K +R+ Y +++ PP+ +
Sbjct: 14 ETAAVLKRTVEALMERGAIVRNLENLGERALPYKISKHNHRHRRGGYFLVDLEGPPSIVS 73
Query: 74 EMKRKMRIDENVLRSLTLL 92
M + D +V+R +
Sbjct: 74 TMMDHLGRDIDVIRRAFIK 92
>gi|91092328|ref|XP_970407.1| PREDICTED: similar to mitochondrial ribosomal protein, S6,
putative [Tribolium castaneum]
Length = 147
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR--IRK--NR 56
M YE L R + ++ + + + I E GG +R + LG R + ++ I +
Sbjct: 1 MITYELCLLYR-IMPKAELASVVKRTANAIFEKGGIIRKLEHLGTRDMPHKTSIHGLVHH 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
KA Y + +PP I + + D +++R
Sbjct: 60 KASYFLIEFNAPPTCIDTLSDEYMRDVDIIR 90
>gi|198426567|ref|XP_002120941.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 142
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRK--- 57
M YE +++ +S Q + + + S + G VR V +G R + Y+I+ + K
Sbjct: 1 MPRYEVSIIMK-LLSRPQKIEAVKEIASYLISQGCNVRKVTSMGDRNLPYKIKVHSKPHH 59
Query: 58 -AYYVFMNIASPPAAIHEMKRKMRIDENVLRS 88
Y+ +++ + + R ++N++RS
Sbjct: 60 QGSYILLDMDFKISQKDALNRYFGHNKNIVRS 91
>gi|254443152|ref|ZP_05056628.1| hypothetical protein VDG1235_1386 [Verrucomicrobiae bacterium
DG1235]
gi|198257460|gb|EDY81768.1| hypothetical protein VDG1235_1386 [Verrucomicrobiae bacterium
DG1235]
Length = 98
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA-YRIRKNRKAYYV 61
Y+ F+L + + D + ++ + G EV V +G + K YV
Sbjct: 7 NYKATFILDTRGREESVDDLVEGLKAELASVGAEVTAVENIGRQDFVRTPDVKYTAGVYV 66
Query: 62 FMNIASPPAAIHEMKRKMRIDENV 85
+ P + K+R+++ V
Sbjct: 67 QYDFTGSPETPAAVLEKLRLNKLV 90
>gi|240279332|gb|EER42837.1| 37S ribosomal protein Mrp17 [Ajellomyces capsulatus H143]
gi|325089599|gb|EGC42909.1| 37S ribosomal protein Mrp17 [Ajellomyces capsulatus H88]
Length = 141
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 20 KDTIGQYQSL-IQENGGEVRLVNELGMRTIAYRIRKN----RKAYYVFMNIASPPAAIHE 74
I + L I +GG +R + G + I K+ ++ M S
Sbjct: 25 PGKIARITGLQILYSGGVIRGLTNWGPFRLPRPITKHQTKYSTGHHFIMRFDSSSVVQQS 84
Query: 75 MKRKMRIDENVLRSLTLLVDSHEQS 99
++R + +D ++R + + + +
Sbjct: 85 VRRTLGLDPRMIRFSVVKLGNKLEE 109
>gi|218509548|ref|ZP_03507426.1| 30S ribosomal protein S6 [Rhizobium etli Brasil 5]
Length = 32
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQE 32
M LYEHVFL RQDIS+QQ+ + QY+ +I+
Sbjct: 1 MALYEHVFLARQDISAQQVDALVEQYKGVIEA 32
>gi|301768401|ref|XP_002919629.1| PREDICTED: 28S ribosomal protein S6, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 123
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIH 73
+ + + + + G VR + LG RT+ Y+I +++ + Y ++ +P A+
Sbjct: 16 ETAAALKRTIEALMDRGAIVRNLENLGDRTLPYKISAHSQQHSRGGYFLVDFYAPATAVE 75
Query: 74 EMKRKMRIDENVLRSLTLL 92
+ + D +V+R +
Sbjct: 76 SIMEHLSRDTDVIRPNVVK 94
>gi|281345140|gb|EFB20724.1| hypothetical protein PANDA_008262 [Ailuropoda melanoleuca]
Length = 118
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIH 73
+ + + + + G VR + LG RT+ Y+I +++ + Y ++ +P A+
Sbjct: 11 ETAAALKRTIEALMDRGAIVRNLENLGDRTLPYKISAHSQQHSRGGYFLVDFYAPATAVE 70
Query: 74 EMKRKMRIDENVLRSLTLL 92
+ + D +V+R +
Sbjct: 71 SIMEHLSRDTDVIRPNVVK 89
>gi|154304276|ref|XP_001552543.1| hypothetical protein BC1G_08408 [Botryotinia fuckeliana B05.10]
gi|150854210|gb|EDN29402.1| hypothetical protein BC1G_08408 [Botryotinia fuckeliana B05.10]
Length = 104
Score = 46.9 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 21 DTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKAYYVFMNIASPPAAIHEMK 76
+ SLI +GG +R + G+ ++ R RK+ + +Y M + ++
Sbjct: 2 EIARTAGSLILRSGGTIRGIRNWGVSSLPKRTRKHQAQYHEGHYFVMRYDASSKTQDNVR 61
Query: 77 RKMRIDENVLRSLTLLV-DSHEQSPT-------LTIQRHDRDD 111
+ +D +++ ++ + D +S + T++ H ++
Sbjct: 62 TTLGLDPRMIKFSSVKLGDGTLESLSKIGSTIPWTMEEHTKEK 104
>gi|119630201|gb|EAX09796.1| hCG2008574, isoform CRA_b [Homo sapiens]
Length = 239
Score = 46.9 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIH 73
+ T+ + + + G VR + LG R + YRI +++ + Y ++ +P AA+
Sbjct: 131 ETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNRGGYFLVDFYAPTAAVE 190
Query: 74 EMKRKMRIDENVLRSLTLL 92
M + D +V+R +
Sbjct: 191 SMVEHLSRDIDVIRGNIVK 209
>gi|296423216|ref|XP_002841151.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637385|emb|CAZ85342.1| unnamed protein product [Tuber melanosporum]
Length = 116
Score = 46.5 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 13/99 (13%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELG------MRT--IAYRIRK 54
LYE V ++R S +IK+ + +NGG VR R + Y
Sbjct: 2 LYELVAVVR-TSSLNEIKEIAKSAGMTVLQNGGVVRGYTYWEKLMLPTRRRAHLVY---- 56
Query: 55 NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
+ Y M S H ++R +R+D ++ + +
Sbjct: 57 HTHGQYFIMRFDSNSPTQHLIQRTLRLDPRMISFSVVKM 95
>gi|311270193|ref|XP_003132805.1| PREDICTED: hypothetical protein LOC100510984 [Sus scrofa]
Length = 436
Score = 46.5 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M YE +L+ + + + + + + G VR + LG R + Y+I + + +
Sbjct: 375 MPRYELALILKA-MQRPETAAALKRTLEALMDRGAVVRNLENLGERMLPYKISAHNQRH 432
>gi|302408881|ref|XP_003002275.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359196|gb|EEY21624.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 157
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIR----KNRKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
I +GG VR + G+ + I K+++ +Y M + A M+ + +D V
Sbjct: 69 ILRSGGVVRGLANWGVFALPRPITRAQMKHKEGHYFVMRYDASARAHQTMRSTISLDPRV 128
Query: 86 LRSLTLLV 93
+RS + V
Sbjct: 129 IRSAHVKV 136
>gi|169614437|ref|XP_001800635.1| hypothetical protein SNOG_10361 [Phaeosphaeria nodorum SN15]
gi|160707348|gb|EAT82696.2| hypothetical protein SNOG_10361 [Phaeosphaeria nodorum SN15]
Length = 119
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 22 TIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NRKAYYVFMNIASPPAAIHEMKR 77
++I G VR + G + +K + ++ M + A H ++R
Sbjct: 27 IAKTAGNIILSQQGVVRGYSNWGTFLLPKPAKKLQSTHHYGHHFIMRFDASARAQHALRR 86
Query: 78 KMRIDENVLRSLTLLVDSHEQ 98
M +D ++R + + +
Sbjct: 87 TMSLDPRLIRYSVVKMGEKFE 107
>gi|149237593|ref|XP_001524673.1| mitochondrial 40S ribosomal protein MRP17 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451270|gb|EDK45526.1| mitochondrial 40S ribosomal protein MRP17 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 118
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 3 LYEHVFLLR---QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----N 55
YE + R I +++ K LI N G +R + +G++ + I K +
Sbjct: 2 HYELFAIARITDPIIHNKEAKKIASTVGKLILNNRGVIRSITSMGVKPLPKIISKDQERH 61
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVD 94
+ Y F+N S ++ R + D VLR+ +D
Sbjct: 62 FRGYNFFINFDSSSKVQEQLLRTLMSDPRVLRANIKKID 100
>gi|316965515|gb|EFV50218.1| putative ribosomal protein S6 [Trichinella spiralis]
Length = 195
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY- 59
M Y+ + +++ + + + TI + + +NG + VN +G + + ++++K++ AY
Sbjct: 36 MPFYDIILIMKPMLKAD-LASTIKRCCVKLLDNGAVLTSVNSMGYKDLPFKMKKDQSAYI 94
Query: 60 ---YVFMNIASPPAAIHEMKRKMRIDENVL 86
Y+ +N A P ++ + R D +++
Sbjct: 95 TGSYILLNCALPFQKYKQLSGEFRRDSDII 124
>gi|213403894|ref|XP_002172719.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces
japonicus yFS275]
gi|212000766|gb|EEB06426.1| mitochondrial ribosomal protein subunit Mrp17 [Schizosaccharomyces
japonicus yFS275]
Length = 111
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 1 MKLYEHVFLLRQ-------DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR 53
M YE + R ++ K+ + +++ + G + G++ + I+
Sbjct: 1 MVFYELFCISRPFVRKMVYTEATDIAKNLAKRCGTILLDRRGAIDGFEVYGLKELDKPIK 60
Query: 54 KNRK----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
K + ++ M A +EM + + D +VLR +
Sbjct: 61 KQGEKYDFGFWWGMRFHCSTFAQYEMFKTLHQDPSVLRFNIIR 103
>gi|66500907|ref|XP_623979.1| PREDICTED: probable 28S ribosomal protein S6, mitochondrial [Apis
mellifera]
Length = 150
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M YE LLR ++ + +S+ + GG +R + G++ + + +
Sbjct: 1 MPTYEMPLLLRLANKTEYVNTLKDIAKSIFET-GGFIRKIENWGIKELPCKTNAHNSIHT 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
A + + SPP+ + +++ R + +++R
Sbjct: 60 HANHFMFSFDSPPSQVVKIQDDCRRNRSIIR 90
>gi|270015687|gb|EFA12135.1| hypothetical protein TcasGA2_TC002281 [Tribolium castaneum]
Length = 135
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 14 ISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR--IRK--NRKAYYVFMNIASPP 69
+ ++ + + + I E GG +R + LG R + ++ I + KA Y + +PP
Sbjct: 1 MPKAELASVVKRTANAIFEKGGIIRKLEHLGTRDMPHKTSIHGLVHHKASYFLIEFNAPP 60
Query: 70 AAIHEMKRKMRIDENVLR 87
I + + D +++R
Sbjct: 61 TCIDTLSDEYMRDVDIIR 78
>gi|189908187|gb|ACE60219.1| mitochondrial 28S ribosomal protein S6 (predicted) [Sorex
araneus]
Length = 118
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIH 73
+ + + + + G VR + LG R + Y++ +++ + Y ++ +P +
Sbjct: 10 ETAAALKRTLEALLDRGAVVRALENLGERALPYKMRAHSQRHSRGGYFLVDFHAPTTMVE 69
Query: 74 EMKRKMRIDENVLRSLTLL 92
+ + D +V+R +
Sbjct: 70 SIMEHLSRDIDVIRPSIVK 88
>gi|321259369|ref|XP_003194405.1| hypothetical protein CGB_E5280W [Cryptococcus gattii WM276]
gi|317460876|gb|ADV22618.1| hypothetical protein CNE04000 [Cryptococcus gattii WM276]
Length = 133
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 1 MKLYEHVFL--------LRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMR-TIAYR 51
M LYE + +R D S ++ + + + ++GG VR + LG+ T+ R
Sbjct: 1 MPLYELFCIAVHNPVSSVRVDTFSVNLRGIVSIVSTQVHQSGGAVRDLKNLGINMTLPQR 60
Query: 52 IRKNRK----AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLV 93
IR+ R+ + M + P + + +R D ++++ L
Sbjct: 61 IRRMRQYYSTGDHFTMTFDTSPIVLKRIHETLRSDPSIIKWTVLKR 106
>gi|41581285|emb|CAE47934.1| mitochondrial 40s ribosomal protein mrp17, putative [Aspergillus
fumigatus]
Length = 105
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 30 IQENGGEVRLVNELGMRTIAYRIRKN----RKAYYVFMNIASPPAAIHEMKRKMRIDENV 85
+ +GG VR G + K+ ++ M + ++R + +D +
Sbjct: 12 VLRSGGVVRGYTNWGTFRLPKPTTKHQARYTDGHHFIMRFDASGPVQSAVRRTLSLDPRM 71
Query: 86 LRSLTLLV-DSHEQ 98
+R + + D E+
Sbjct: 72 IRFSVVKLGDKLEE 85
>gi|50294770|ref|XP_449796.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529110|emb|CAG62774.1| unnamed protein product [Candida glabrata]
Length = 118
Score = 43.8 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 3 LYEHVFLLR---QDIS-SQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKA 58
LYE + ++R Q+ K+ +I EN G VR + +G + I K+++
Sbjct: 2 LYELIAMVRILQPKHQMQQEAKELATTIGRMIIENRGVVRKIMPMGKTMLPRVITKDQER 61
Query: 59 YY----VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLT 103
++ M S ++ R +R D V+RS + +++ ++ +L+
Sbjct: 62 HFQAFKFLMLFDSSIPVQSQILRTLRKDPRVIRSSIVKINTEKELASLS 110
>gi|332029824|gb|EGI69693.1| Putative 28S ribosomal protein S6, mitochondrial [Acromyrmex
echinatior]
Length = 149
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 24/139 (17%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----R 56
M YE LLR + ++ + + I GG +R + G+ + + + R
Sbjct: 1 MPTYEMPLLLR-IMKKPELVAALKRTAETIFNTGGFIRKIENCGVIPLPCKTNAHGHIHR 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDS--------HEQ------SPTL 102
+A + + PP + ++ K D +++RS + HE+ P++
Sbjct: 60 EANHFLIYFDVPPNEVDKITDKYNRDIDIVRSKIFKQNKPSNTKCTFHEEMLPPPYRPSV 119
Query: 103 -----TIQRHDRDDRNDRF 116
++ +R+ ++
Sbjct: 120 QKLIEMAKKQNRNKHEFKY 138
>gi|218187764|gb|EEC70191.1| hypothetical protein OsI_00930 [Oryza sativa Indica Group]
gi|222617997|gb|EEE54129.1| hypothetical protein OsJ_00911 [Oryza sativa Japonica Group]
Length = 179
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 38/158 (24%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M LY+ + L++ ++ + + + +G+ + G V V G + Y I+K ++
Sbjct: 1 MPLYDCMLLVKPLVTREAMAELVGRVARRAYQRNGVVTDVKSFGTICLGYGIKKLDGRHF 60
Query: 61 -------------------------------------VFMNIASPPAAIHEMKRKMRIDE 83
+ M + PP+ E+ + ++
Sbjct: 61 KEYQDYSGWVAQKNRCAAVNGLFALNNITLDSFEGQLMQMTMMVPPSFTQEL-HYLNKED 119
Query: 84 NVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRN 121
+LR L + + R + D R ++
Sbjct: 120 RLLRWLVVKHRDAVYGVEFINEDDGRREMTDFRYRTKD 157
>gi|299116362|emb|CBN74627.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 147
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 15/145 (10%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR------IRK 54
M Y+ + LR + + + + ++I E GG VR V G+R + YR I++
Sbjct: 1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKE 60
Query: 55 -----NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDR 109
+ + PA +M+ ++ ++ V+R + H+R
Sbjct: 61 KDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIR---VSTRRPATKMDRIASTHER 117
Query: 110 DDRNDRFPRDRNV-DRKQHVSEEKP 133
+ D R+RN ++ H P
Sbjct: 118 SNPWDMEWRNRNGIEQPVHNRRRTP 142
>gi|296084586|emb|CBI25607.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 7 VFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY----VF 62
+ LL+ ++ + + D + + + G + + G+ + Y I+K YY +
Sbjct: 1 MLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYYQGQLMQ 60
Query: 63 MNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
M++ + P E+ + ++ +LR L +
Sbjct: 61 MSMMATPNFNKEL-HYLNKEDRLLRWLLVK 89
>gi|332871982|ref|XP_531445.3| PREDICTED: 28S ribosomal protein S6, mitochondrial [Pan
troglodytes]
gi|119630200|gb|EAX09795.1| hCG2008574, isoform CRA_a [Homo sapiens]
Length = 96
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 32 ENGGEVRLVNELGMRTIAYRI----RKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+ G VR + LG R + YRI +++ + Y ++ +P AA+ M + D +V+R
Sbjct: 2 DRGAIVRDLENLGERALPYRISAHSQQHNRGGYFLVDFYAPTAAVESMVEHLSRDIDVIR 61
Query: 88 SLTLL 92
+
Sbjct: 62 GNIVK 66
>gi|303287432|ref|XP_003063005.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455641|gb|EEH52944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 200
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MKLYEHVFL-LRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAY 59
M LY+ +F+ ++ + Q+ D + + + + GG + + G +T+AY+IRK + +
Sbjct: 1 MVLYD-MFIAVKSTVPRSQMADVLRKMGHRVLDAGGVITDITSFGTQTLAYQIRKQGQGH 59
Score = 41.5 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 56 RKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+A Y+ M+ + P I + +R DE +LR L V+ +L + RD RN
Sbjct: 131 SQANYMQMSFNAKPEVIDVITYDLRTDERILRFLPKKVNKGRPLRSLKEYK-ARDSRNP 188
>gi|239788960|dbj|BAH71131.1| ACYPI000324 [Acyrthosiphon pisum]
Length = 146
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 12 QDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK-------NRKAYYVFMN 64
Q + +I + + S I E+GG +R ++ LG AY K +++A Y +
Sbjct: 5 QVLPRPEITQCLKRTASKIFESGGFIRRIDYLG---TAYTPWKISSHDAIHKQASYFIVE 61
Query: 65 IASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
P +A+ + D ++++ V + P T+
Sbjct: 62 FDVPSSAVDPFNNYLSRDIDIIKPSIFKVPENIPQPACTLHEE 104
>gi|156544885|ref|XP_001607206.1| PREDICTED: similar to ENSANGP00000026583 [Nasonia vitripennis]
Length = 153
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRI----RKNR 56
M YE LL+ ++ ++ T+ + I + GG +R ++ LG YR+ ++
Sbjct: 1 MPAYEMPLLLK-IMTRPELVVTLKRTAESIFKKGGFIRKIDNLGKLATPYRMSANNETHK 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
+A Y ++ PP+ + + + + D ++++
Sbjct: 60 EANYFIIHFDLPPSKLATLNEECQRDIDIVK 90
>gi|71027351|ref|XP_763319.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350272|gb|EAN31036.1| hypothetical protein TP03_0301 [Theileria parva]
Length = 131
Score = 41.5 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYY 60
M++ L D ++IK + I++ G E + LG++++ I+K +A++
Sbjct: 1 MRI--IFLLFYCDRPVEKIKQQFITVLNKIKQIGVENIHIYNLGLKSLVRPIKKQYQAHF 58
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
+ + + S P+ I+ ++ K +E VLR L L ++
Sbjct: 59 LLVKLCSYPSIINLLRLKFLQEEGVLRILLLKDKESDKE 97
>gi|307069611|ref|YP_003878088.1| putative 30S ribosomal subunit protein S6 [Candidatus Zinderia
insecticola CARI]
gi|306482871|gb|ADM89742.1| putative 30S ribosomal subunit protein S6 [Candidatus Zinderia
insecticola CARI]
Length = 74
Score = 41.5 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 34 GGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIH 73
GG++ V +LG + ++Y+I+K + AYY+ I P ++
Sbjct: 34 GGKILYVKKLGYKILSYKIKKKKNAYYLCFYILLNPEFLN 73
>gi|310824688|ref|YP_003957046.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309397760|gb|ADO75219.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 1299
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
L+ ++ + + E G EV + R +A RIRK ++ M ++ P
Sbjct: 784 LVHPTREGLEVSAAVAPVLDALAEAGVEVHAPPDW--RKLATRIRKAQE-----MEVSVP 836
Query: 69 PAAIHEM 75
PA E+
Sbjct: 837 PALKAEL 843
>gi|115371958|ref|ZP_01459270.1| helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370923|gb|EAU69846.1| helicase [Stigmatella aurantiaca DW4/3-1]
Length = 857
Score = 41.2 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 9 LLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
L+ ++ + + E G EV + R +A RIRK ++ M ++ P
Sbjct: 342 LVHPTREGLEVSAAVAPVLDALAEAGVEVHAPPDW--RKLATRIRKAQE-----MEVSVP 394
Query: 69 PAAIHEM 75
PA E+
Sbjct: 395 PALKAEL 401
>gi|255037427|ref|YP_003088048.1| threonine dehydratase [Dyadobacter fermentans DSM 18053]
gi|254950183|gb|ACT94883.1| threonine dehydratase [Dyadobacter fermentans DSM 18053]
Length = 437
Score = 40.0 bits (93), Expect = 0.097, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 13 DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAI 72
D+ + IK LI ++ E+ R++ Y K +Y + A
Sbjct: 315 DLIREDIKG--KNVVVLISGGNNDITRTEEIKERSLLYEGLK----HYFIIRFPQRSGAF 368
Query: 73 HEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSE 130
E + ++++ R + + EQ P L + R D P +D + V E
Sbjct: 369 REFLNVLGPNDDIARFEYVKKTNREQGPALV--GIELKSREDFAPLIERMDANRVVYE 424
>gi|322785369|gb|EFZ12042.1| hypothetical protein SINV_00727 [Solenopsis invicta]
Length = 238
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKN----RKAYYVFMNIASPPAAIH 73
++ T+ + I GG +R + G++ + + + R+A + F+ +PP I
Sbjct: 2 ELVATLKRTAESIFGTGGFIRKIENCGVKPLPCKTNAHGHVYREANHFFIYFDAPPHEID 61
Query: 74 EMKRKMRIDENVLRSLTLLVDS 95
++ K D +++RS +
Sbjct: 62 KITDKCNRDIDIVRSKIFKQNE 83
>gi|294055118|ref|YP_003548776.1| ribosomal protein S6 [Coraliomargarita akajimensis DSM 45221]
gi|293614451|gb|ADE54606.1| ribosomal protein S6 [Coraliomargarita akajimensis DSM 45221]
Length = 99
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR-KNRKAYY 60
Y+ F+L + + I GGEV ++LG+R A + +A Y
Sbjct: 7 NKYKFSFILDLRNTEDDVAKVQADITEAIAAVGGEVSDSDDLGVREFARAADRRYTQAQY 66
Query: 61 VFMNIASPPAAIHEMKRKMRIDENVLR 87
+ + ++ P + ++K K++ ++ + R
Sbjct: 67 IILYVSGPSSIDRDLKDKLKHEKRINR 93
>gi|308485232|ref|XP_003104815.1| hypothetical protein CRE_24015 [Caenorhabditis remanei]
gi|308257513|gb|EFP01466.1| hypothetical protein CRE_24015 [Caenorhabditis remanei]
Length = 162
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
M YE + R +S + + + + + ++G + V LG R + Y+
Sbjct: 1 MPFYEVSMITR-SLSKADLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYK 50
>gi|58267746|ref|XP_571029.1| hypothetical protein CND04000 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134112299|ref|XP_775125.1| hypothetical protein CNBE3990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257777|gb|EAL20478.1| hypothetical protein CNBE3990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227263|gb|AAW43722.1| hypothetical protein CNE04000 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 153
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 34/132 (25%)
Query: 1 MKLYEHVFL--------LRQDI------------------SSQQIK--DTIGQYQSLIQE 32
M LYE + +R DI S Q+ + + + +
Sbjct: 1 MPLYELFCIAVHNPVSSVRADIFSLPPRTFHADIHLPIIFSPLQVNLRGIVNIVSTQVHQ 60
Query: 33 NGGEVRLVNELGMR-TIAYRIRKNRK----AYYVFMNIASPPAAIHEMKRKMRIDENVLR 87
GG VR + LG+ T+ RIR+ R+ + M + P + + +R D +V++
Sbjct: 61 TGGVVRDLKNLGINMTLPQRIRRMRQYYSTGDHFTMTFDTSPIVLKRIHETLRSDPSVIK 120
Query: 88 SLTLLV-DSHEQ 98
L D ++
Sbjct: 121 WTVLKRADKAKE 132
>gi|32564839|ref|NP_491318.2| hypothetical protein R12E2.12 [Caenorhabditis elegans]
gi|27669429|gb|AAC17033.2| Hypothetical protein R12E2.12 [Caenorhabditis elegans]
Length = 162
Score = 39.2 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
M YE + R +S + + + + + ++G + V LG R + Y+
Sbjct: 1 MPFYEVSMITR-SLSKADLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYK 50
>gi|332706177|ref|ZP_08426246.1| hypothetical protein LYNGBM3L_15670 [Lyngbya majuscula 3L]
gi|332355014|gb|EGJ34485.1| hypothetical protein LYNGBM3L_15670 [Lyngbya majuscula 3L]
Length = 945
Score = 38.8 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 6 HVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMN- 64
V+ Q+IS Q+ + + ++Q +I + G I+K Y +
Sbjct: 619 LVYSFHQNISDDQVDEAVKKFQEIITKPTGANHT------------IKKELPQIYDLLIR 666
Query: 65 -IASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS-PTLTIQRHDRDD 111
E++ D++ +++L ++D ++ P + ++D
Sbjct: 667 PFE------EELETNRDRDQSPIKTLVFILDGSLRNIPVAALYDREKDK 709
>gi|312070693|ref|XP_003138264.1| hypothetical protein LOAG_02679 [Loa loa]
gi|307766574|gb|EFO25808.1| hypothetical protein LOAG_02679 [Loa loa]
Length = 170
Score = 38.8 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
M LYE + R ++ ++ I + ++ +NG + + LG R + +R
Sbjct: 1 MPLYEITLITR-SLAKPELFTAIRRAAKVLLDNGAIIEKLESLGHRDLPFR 50
>gi|253575053|ref|ZP_04852392.1| threonine dehydratase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845509|gb|EES73518.1| threonine dehydratase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 420
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 13 DISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAI 72
D+ QI+ +I ++ + E+ R++ Y K +Y +N A+
Sbjct: 297 DMYRDQIRG--KTVVCVISGGNNDIDRMQEMKERSLIYEGLK----HYFLINFPQRAGAL 350
Query: 73 HE-MKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
E ++ + ++++ R + E P L + D+ D P
Sbjct: 351 REFLEEVLGPNDDITRFEYTKKHNKENGPALV--GIELSDKADYEP 394
>gi|268561132|ref|XP_002646371.1| Hypothetical protein CBG12089 [Caenorhabditis briggsae]
gi|187029915|emb|CAP31125.1| hypothetical protein CBG_12089 [Caenorhabditis briggsae AF16]
Length = 162
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
M YE + R +S + + + + + ++G + V LG R + Y+
Sbjct: 1 MPFYEVSMITR-SLSKPDLVKALTRAGNTLLDHGAVIEKVESLGHRDLPYK 50
>gi|221104355|ref|XP_002157562.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
gi|221121168|ref|XP_002161795.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 127
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK----NR 56
M YE + + R + Q+K + + + + + +R + +G + + YR++ +
Sbjct: 1 MPRYELLLITRA-LERPQLKIVLQRTAANLFQQEAIIRKIESMGQQELPYRMKSNSVWHT 59
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
Y + + +++++ D +++R +
Sbjct: 60 HGNYFLFDAYIKLDKLPFIRKELSFDSDIIRQTFIK 95
>gi|225718250|gb|ACO14971.1| Probable mitochondrial 28S ribosomal protein S6 [Caligus clemensi]
Length = 148
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA----YRIRKNR 56
M YE +LR ++ ++ + + +L+ ++ G +R + LG R + Y+ ++
Sbjct: 1 MPTYELNLVLR-KMARPEVVTALQRTAALVMKD-GYIRKMVSLGGRRLPQVQEYKGERHS 58
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ Y M + P ++ + +++ D + LR + V + P T++
Sbjct: 59 EGTYFLMKVDLPVESVVPVLSELKRDGDFLRKQFVGVKE-KSDPVCTLEEE 108
>gi|225709506|gb|ACO10599.1| Probable mitochondrial 28S ribosomal protein S6 [Caligus
rogercresseyi]
Length = 148
Score = 38.1 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA----YRIRKNR 56
M YE +LR+ + + + SL+ + G +R + G R +R ++
Sbjct: 1 MPTYELNLVLRKMARPETVTAL-QRAASLVMKE-GYIRNMESFGERRFPQTTEFRGERHS 58
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ Y M + P + ++ + ++ +D + +R + V + P T++
Sbjct: 59 EGTYFLMKVDVPVSRLNPILSELTLDGDFIRKKFISVKE-KPDPVCTLEEE 108
>gi|225709224|gb|ACO10458.1| Probable mitochondrial 28S ribosomal protein S6 [Caligus
rogercresseyi]
Length = 148
Score = 37.7 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIA----YRIRKNR 56
M YE +LR+ + + + SL+ + G +R + G R +R ++
Sbjct: 1 MPTYELNLVLRKMARPETVTAL-QRAASLVMKE-GYIRNMESFGERRFPQTTEFRGERHS 58
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ Y M + P + ++ + ++ +D + +R + V + P T++
Sbjct: 59 EGTYFLMKVDVPVSRLNPILSELTLDGDFIRKKFISVKE-KPDPVCTLEEE 108
>gi|283953802|ref|ZP_06371333.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding
[Campylobacter jejuni subsp. jejuni 414]
gi|283794843|gb|EFC33581.1| oxidoreductase, FAD-binding, iron-sulfur cluster-binding
[Campylobacter jejuni subsp. jejuni 414]
Length = 923
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 18/69 (26%)
Query: 8 FLLRQDISSQ----QIKDTIGQYQSLIQENGGEVRLVN------------ELGMRTIAYR 51
F++ D++++ + + + +++ GG ++ + E G + AY
Sbjct: 435 FIITPDLNNELEFDNFSNLVKEMSNIVASYGGSIKAEHGTGRMVAPFVEVEWGKQ--AYE 492
Query: 52 IRKNRKAYY 60
I K K+ +
Sbjct: 493 INKKIKSIF 501
>gi|307188130|gb|EFN72962.1| ER degradation-enhancing alpha-mannosidase-like 3 [Camponotus
floridanus]
Length = 1539
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 18 QIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------NRKAYYVFMNIASPP-- 69
++ T+ + S I GG +R + G++ + + +R+A + + PP
Sbjct: 1407 ELVATLKRATSTIFNTGGFIRKIENWGVKPL--PCKAVAHGQVHREANHFLIYFDVPPRE 1464
Query: 70 --AAIHEMKRKMRI 81
+ E R + I
Sbjct: 1465 LDKIVDECNRDIDI 1478
>gi|256420968|ref|YP_003121621.1| threonine dehydratase [Chitinophaga pinensis DSM 2588]
gi|256035876|gb|ACU59420.1| threonine dehydratase [Chitinophaga pinensis DSM 2588]
Length = 418
Score = 36.9 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 24 GQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEM-KRKMRID 82
+ ++ + ++ + E+ R++ Y K +Y + P A+ E + +
Sbjct: 304 KKVVCVVSGSNNDIDRMQEIKERSLLYEGLK----HYFIIRFVQRPGALKEFVNHVLGPN 359
Query: 83 ENVLRSLTLLVDSHEQSPTLT-IQRHDRDD 111
+++ R + + E P L ++ +R+D
Sbjct: 360 DDITRFEFIQKHNKETGPALIGVELKNRED 389
>gi|170584555|ref|XP_001897064.1| hypothetical protein Bm1_28060 [Brugia malayi]
gi|158595549|gb|EDP34093.1| hypothetical protein Bm1_28060 [Brugia malayi]
Length = 170
Score = 36.5 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYR 51
M YE + R ++ ++ TI + ++ +NG + + LG R + +R
Sbjct: 1 MPSYEITLITR-SLAKPELFTTIRRAAKVLLDNGAIIEKLESLGHRDLPFR 50
>gi|242006510|ref|XP_002424093.1| mitochondrial 28S ribosomal protein S6, putative [Pediculus humanus
corporis]
gi|212507399|gb|EEB11355.1| mitochondrial 28S ribosomal protein S6, putative [Pediculus humanus
corporis]
Length = 175
Score = 36.5 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR-KNR--- 56
M LY+ + ++ ++ +K + + + E+GG +R + LG+ + I+ KN
Sbjct: 19 MPLYDLIVFVKH-LNRDFLKTVLTRNAKYVIESGGLLRSIENLGLNELHRGIKPKNSRKI 77
Query: 57 --KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRND 114
+A++ +N + ++ K R D +V+RS++ S + + D
Sbjct: 78 EYEAHFFNLNYYAGEKENRDIVDKFRRDVDVMRSISFASKSVPGGSIFPKKEPECTLHED 137
Query: 115 RFPRDRNV 122
P
Sbjct: 138 LKPAPYRP 145
>gi|218676249|ref|YP_002395068.1| Flp pilus assembly protein [Vibrio splendidus LGP32]
gi|218324517|emb|CAV25991.1| Flp pilus assembly protein [Vibrio splendidus LGP32]
Length = 446
Score = 36.5 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 23/90 (25%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L + S++IK I + GE+ + R AY ++ +
Sbjct: 126 VVLDGIVGSEEIKQKINRLV-------GEMLKKD---RRRAAYELK------------DA 163
Query: 68 PPAAIHEMKRKMRID-ENVLRSLTLLVDSH 96
A+ E++ + + + V+ +L +L
Sbjct: 164 DGEALDELEYTAKYNYDQVINNLKVLTTEQ 193
>gi|225714128|gb|ACO12910.1| Probable mitochondrial 28S ribosomal protein S6 [Lepeophtheirus
salmonis]
gi|290561899|gb|ADD38347.1| Probable 28S ribosomal protein S6, mitochondrial [Lepeophtheirus
salmonis]
Length = 148
Score = 36.5 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIR----KNR 56
M YE +LR+ + + + SLI N G +R + LG R +
Sbjct: 1 MPTYELNLVLRKMARPETVSAL-QRAASLIL-NEGYIRKMESLGERKFPQMTELKGERLS 58
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRH 107
+ Y M + P + + ++ +D + +R + V ++SP T++
Sbjct: 59 EGTYFLMKVDLPVNRLETILSELTLDGDFIRKKFVGVKE-KKSPVCTLEEE 108
>gi|86144318|ref|ZP_01062650.1| Flp pilus assembly protein [Vibrio sp. MED222]
gi|85837217|gb|EAQ55329.1| Flp pilus assembly protein [Vibrio sp. MED222]
Length = 441
Score = 36.5 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 23/90 (25%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L + S++IK I + GE+ + R AY ++ +
Sbjct: 121 VVLDGIVGSEEIKQKINRLV-------GEMLKKD---RRRAAYELK------------DA 158
Query: 68 PPAAIHEMKRKMRID-ENVLRSLTLLVDSH 96
A+ E++ + + + V+ +L +L
Sbjct: 159 DGEALDELEYTAKYNYDQVINNLKVLTTEQ 188
>gi|311747362|ref|ZP_07721147.1| 4-hydroxybutyrate coenzyme A transferase [Algoriphagus sp. PR1]
gi|126579080|gb|EAZ83244.1| 4-hydroxybutyrate coenzyme A transferase [Algoriphagus sp. PR1]
Length = 431
Score = 36.1 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 2 KLYEHVFLLRQDISSQQIKDTIGQYQSLI 30
+ YE + + D + K + ++ S I
Sbjct: 399 RAYELMRIAHPDHQEELEKAIVDRFGSYI 427
>gi|304438944|ref|ZP_07398867.1| site-specific DNA-methyltransferase (adenine-specific)
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372610|gb|EFM26193.1| site-specific DNA-methyltransferase (adenine-specific)
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 676
Score = 36.1 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 6 HVFLLRQDISSQQIKDTIGQYQS 28
H++L+ D+S + IK + +Y +
Sbjct: 608 HLYLINPDLSEEAIKALVEKYNT 630
>gi|255090009|ref|XP_002506926.1| predicted protein [Micromonas sp. RCC299]
gi|226522199|gb|ACO68184.1| predicted protein [Micromonas sp. RCC299]
Length = 895
Score = 35.8 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 57 KAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL-VDSHEQSPTLTIQRHDRDDRNDR 115
+A Y + I + +R+++ + ++SP+ ++ +
Sbjct: 775 EANYHVLAIRCGEGGVDSF--SVRLNDRGYVYVGAKQRRKSKKSPSPDADGQEQTSEREA 832
Query: 116 FPRDRNVDRKQHVSEEKPLS 135
P D D SEE+PL
Sbjct: 833 EPEDEKPDTASQSSEEEPLG 852
>gi|219125652|ref|XP_002183089.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405364|gb|EEC45307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 140
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRK------ 54
M YE V + + + + GG VR ++ G+R + +R +
Sbjct: 1 MVFYECV--------------LTAKNTAQVVKGGGIVRGIHNHGIRDLPHRFQARYADSQ 46
Query: 55 ----NRKAYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLL 92
+K ++ + S P + ++++ + +DENVLR+ L
Sbjct: 47 GNRYYQKGRFISIYYDSNPTTMRQVEQTLSMDENVLRNTHLK 88
>gi|325111117|ref|YP_004272185.1| hypothetical protein Plabr_4592 [Planctomyces brasiliensis DSM
5305]
gi|324971385|gb|ADY62163.1| hypothetical protein Plabr_4592 [Planctomyces brasiliensis DSM
5305]
Length = 412
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRT 47
F+LR D+++++ K+ + + ++++ G + G R
Sbjct: 51 FILRTDLTAEESKELLDRLETML----GLISR--YWGKRN 84
>gi|196013103|ref|XP_002116413.1| hypothetical protein TRIADDRAFT_60496 [Trichoplax adhaerens]
gi|190581004|gb|EDV21083.1| hypothetical protein TRIADDRAFT_60496 [Trichoplax adhaerens]
Length = 1124
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 74 EMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVS 129
E +R+ +++E L + E+ + +QR +RD +++ DR+Q S
Sbjct: 445 EAERQFKLEE-------LRLKKLEKEAKVELQRQERDKARSDALKEKARDREQKKS 493
>gi|164658642|ref|XP_001730446.1| hypothetical protein MGL_2242 [Malassezia globosa CBS 7966]
gi|159104342|gb|EDP43232.1| hypothetical protein MGL_2242 [Malassezia globosa CBS 7966]
Length = 69
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQS 99
Y M + + + ++R D V++ TL + +
Sbjct: 4 YWLMQFDTNAPTLKVLNDRLRQDPRVIKWNTLKLGEKLRE 43
>gi|288226415|gb|ADC44692.1| glycolate oxidase D-subunit [uncultured bacterium]
Length = 300
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 5 EHVFLLRQDISSQQIKDTIGQYQSLIQENGG--------EVRLVNELGMRTIAYRIRKNR 56
E + L D + +++ + I + ++++ G E + R A+
Sbjct: 160 EAILLCESDGTPEEVAEEIERMTEVLKKAGASGIQISRDEAERLKFWSRRKNAFPAAGRL 219
Query: 57 KAYYVFMNIASPPAAIHEM 75
A Y M+ P I +
Sbjct: 220 AADYYCMDGTIPRRHIATL 238
>gi|288226383|gb|ADC44676.1| glycolate oxidase D-subunit [uncultured bacterium]
Length = 300
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 5 EHVFLLRQDISSQQIKDTIGQYQSLIQENGG--------EVRLVNELGMRTIAYRIRKNR 56
E + L D + +++ + I + ++++ G EV + R A+
Sbjct: 160 EAILLCESDGTPEEVAEEIERMTEVLKKAGASGIQISRDEVERLKFWSGRKNAFPAAGRL 219
Query: 57 KAYYVFMNIASPPAAIHEM 75
A Y M+ P I +
Sbjct: 220 AADYYCMDGTIPRRHIATL 238
>gi|288226385|gb|ADC44677.1| glycolate oxidase D-subunit [uncultured bacterium]
Length = 300
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 5 EHVFLLRQDISSQQIKDTIGQYQSLIQENGG--------EVRLVNELGMRTIAYRIRKNR 56
E + L D + +++ + I + ++++ G EV + R A+
Sbjct: 160 EAILLCESDGTPEEVAEEIERMTEVLKKAGASGIQISRDEVERLKFWSGRKNAFPAAGRL 219
Query: 57 KAYYVFMNIASPPAAIHEM 75
A Y M+ P I +
Sbjct: 220 AADYYCMDGTIPRRHIATL 238
>gi|315645263|ref|ZP_07898388.1| threonine dehydratase [Paenibacillus vortex V453]
gi|315279305|gb|EFU42611.1| threonine dehydratase [Paenibacillus vortex V453]
Length = 422
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 29 LIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHE-MKRKMRIDENVLR 87
+I ++ + E+ R++ Y K +Y +N A+ E ++ + D+++ R
Sbjct: 313 IISGGNNDIDRMQEIKERSLIYEGLK----HYFMINFPQRAGALREFLEEVLGPDDDIAR 368
Query: 88 SLTLLVDSHEQSPTL 102
+ E P L
Sbjct: 369 FEYTKKHNKEDGPAL 383
>gi|261404832|ref|YP_003241073.1| threonine dehydratase [Paenibacillus sp. Y412MC10]
gi|329926111|ref|ZP_08280702.1| threonine ammonia-lyase [Paenibacillus sp. HGF5]
gi|261281295|gb|ACX63266.1| threonine dehydratase [Paenibacillus sp. Y412MC10]
gi|328939385|gb|EGG35739.1| threonine ammonia-lyase [Paenibacillus sp. HGF5]
Length = 422
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 29 LIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHE-MKRKMRIDENVLR 87
+I ++ + E+ R++ Y K +Y +N A+ E ++ + D+++ R
Sbjct: 313 IISGGNNDIDRMQEIKERSLIYEGLK----HYFMINFPQRAGALREFLEEVLGPDDDIAR 368
Query: 88 SLTLLVDSHEQSPTL 102
+ E P L
Sbjct: 369 FEYTKKHNKEDGPAL 383
>gi|297562136|ref|YP_003681110.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296846584|gb|ADH68604.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 622
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 66 ASPPAAIHEMKRKMRIDENVLRSLT----LLVDSHEQSPTLTIQRHDRDDR 112
A+ E+ R + E V R L V+ E +P+L ++R +D+
Sbjct: 556 EMVQEAVDELNRGLPRHETVKRFAILPSDLTVEEGEMTPSLKMRRRAVEDK 606
>gi|150398813|ref|YP_001322580.1| glycine betaine ABC transporter substrate-binding protein
[Methanococcus vannielii SB]
gi|150011516|gb|ABR53968.1| Substrate-binding region of ABC-type glycine betaine transport
system [Methanococcus vannielii SB]
Length = 294
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 15/54 (27%)
Query: 59 YYVFMNIA----SPPAAIHEMKRKMRIDENVL-----------RSLTLLVDSHE 97
Y N S PA + E++R +EN++ R +++D E
Sbjct: 166 IYGLENYELKSSSTPAMMAELERAFNRNENIIVTVWEPHSVFFRFDIVMLDDPE 219
>gi|297527025|ref|YP_003669049.1| glycoside hydrolase family 57 [Staphylothermus hellenicus DSM
12710]
gi|297255941|gb|ADI32150.1| glycoside hydrolase family 57 [Staphylothermus hellenicus DSM
12710]
Length = 837
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 31 QENGGEVRLVNELGMRTIAYR-IRKNRKAYYVFMNIASPPAAIHEMKRKMRIDENVL 86
E G + E Y I K KAY + NI S I E+K+ + +E+V+
Sbjct: 496 TEQGAK--HKEEWEK---LYERIGKY-KAYMYYKNIDSYNKFIDEIKKNPKFNESVI 546
>gi|18490053|ref|NP_569138.1| polyprotein [Maize dwarf mosaic virus]
gi|3123636|emb|CAA04929.1| polyprotein [Maize dwarf mosaic virus]
Length = 3041
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVR---LVNELGMRTIAYRIRKN 55
YE +++ + ++I + +SLI + E +V G + + + IRK
Sbjct: 2631 KYEEMYI--PKLEKERIVAILEWDRSLIPQYRLEAVCAAMVEAWGYKDLLHEIRKF 2684
>gi|325568620|ref|ZP_08144913.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus ATCC 12755]
gi|325157658|gb|EGC69814.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus ATCC 12755]
Length = 394
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 19 IKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAA-IHEMKR 77
+ + +GQ S+I E+G + + G A Y ++AS A ++++
Sbjct: 324 VPNMLGQISSIIAESGINIDNMLNRGREDFA----------YTLADVASEDEALLNQLAD 373
Query: 78 KMRIDENVLRSLTLL 92
K+R +EN++R +
Sbjct: 374 KLRENENIVRVRVIK 388
>gi|257877286|ref|ZP_05656939.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
gi|257811452|gb|EEV40272.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
Length = 394
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Query: 4 YEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFM 63
Y + ++ + + +GQ S+I E+G + + G A Y
Sbjct: 315 YRLTII------NRNVPNMLGQISSIIAESGINIDNMLNRGREDFA----------YTLA 358
Query: 64 NIASPPAA-IHEMKRKMRIDENVLRSLTLL 92
++AS ++++ K+R +EN++R +
Sbjct: 359 DVASEDEVLLNQLADKLRENENIVRVRVIK 388
>gi|126663678|ref|ZP_01734674.1| threonine ammonia-lyase [Flavobacteria bacterium BAL38]
gi|126624261|gb|EAZ94953.1| threonine ammonia-lyase [Flavobacteria bacterium BAL38]
Length = 413
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 14 ISSQQIKDTIGQYQS-----LIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP 68
+S + + + ++ + ++ E+ R++ Y K +Y +
Sbjct: 284 LSIAALDFIADEIKGKTVVCVVSGSNNDIERTEEIKERSLIYEGLK----HYFMIQFPQR 339
Query: 69 PAAIHEM-KRKMRIDENVLRSLTLLVDSHEQSPTLT--IQRHDRDDRNDRFPRDRNVDRK 125
P A+ E + +++ + ++ + P + +++ D +F + +
Sbjct: 340 PGALKEFVNEILNESDDITYFQFIKKNNRDVGPVVVGLEIKNEEDIAAVKFKMNEKGFQF 399
Query: 126 QHVSEEKPL 134
Q+++E++PL
Sbjct: 400 QYLNEKEPL 408
>gi|25013547|ref|NP_734151.1| NIb (Nuclear inclusion protein, replicase [Maize dwarf mosaic
virus]
Length = 521
Score = 34.2 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 3 LYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVR---LVNELGMRTIAYRIRKN 55
YE +++ + ++I + +SLI + E +V G + + + IRK
Sbjct: 402 KYEEMYI--PKLEKERIVAILEWDRSLIPQYRLEAVCAAMVEAWGYKDLLHEIRKF 455
>gi|224541669|ref|ZP_03682208.1| hypothetical protein CATMIT_00841 [Catenibacterium mitsuokai DSM
15897]
gi|224525418|gb|EEF94523.1| hypothetical protein CATMIT_00841 [Catenibacterium mitsuokai DSM
15897]
Length = 1198
Score = 33.8 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 13 DISSQQIKDTIGQYQSLIQEN---GGEVRLVNELGMRTIAYRIRKNRKAYYV------FM 63
D S +++ + + + I+ G+ ++ +A I+K + Y M
Sbjct: 1032 DASQEEVNEAAKKLEDAIKGLDVLKGDTTALDA----KLA-EIKKLDEKKYTADSWAALM 1086
Query: 64 NIASPPAAI-HEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNV 122
N+ + + E ++ +DE V + LT VD+ E+ + ++ ++ + P +
Sbjct: 1087 NVVAEAKGLDAENATQVEVDEVVAK-LTKAVDALEEKVVIEPEKPTVPEKPETKPEIKPE 1145
Query: 123 DRKQHVSEEKP 133
+ + EEKP
Sbjct: 1146 TKPEVKPEEKP 1156
>gi|148974885|ref|ZP_01811865.1| rough colony protein RcpA [Vibrionales bacterium SWAT-3]
gi|145965394|gb|EDK30643.1| rough colony protein RcpA [Vibrionales bacterium SWAT-3]
Length = 441
Score = 33.8 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 23/90 (25%)
Query: 8 FLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIAS 67
+L + S++IK I + GE+ R AY ++ +
Sbjct: 121 VVLDGIVGSEEIKQKINRLV-------GEMLNKE---RRRAAYELK------------DA 158
Query: 68 PPAAIHEMKRKMRID-ENVLRSLTLLVDSH 96
A+ E++ + + + V+ +L +L
Sbjct: 159 DGEALDEIEYTAQYNYDQVINNLKVLTTEQ 188
>gi|296425870|ref|XP_002842461.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638729|emb|CAZ86652.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 33.8 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 92 LVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDRKQHVSEEKPLS 135
++ ++SPT + + +++ R DR K+ E+ PLS
Sbjct: 307 RRETRQESPTPITKHEEEGEKDPREDEDRRGGAKEDQEEKTPLS 350
>gi|229590094|ref|YP_002872213.1| putative sensor histidine kinase/response regulator fusion protein
[Pseudomonas fluorescens SBW25]
gi|229361960|emb|CAY48860.1| putative sensor histidine kinase/response regulator fusion protein
[Pseudomonas fluorescens SBW25]
Length = 831
Score = 33.8 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 58 AYYVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFP 117
+Y+F I E +R ++ E LR L ++ T + ++ +N+ F
Sbjct: 392 GFYIF--------VIDETER--KLTEEALRHLNENLEERVAQRTQALAEANQRLQNEMFE 441
Query: 118 RDRNVDRKQHVSEEKPLS 135
R+R D +H + + +
Sbjct: 442 RERAEDALRHAQKMEAVG 459
>gi|308504379|ref|XP_003114373.1| hypothetical protein CRE_27118 [Caenorhabditis remanei]
gi|308261758|gb|EFP05711.1| hypothetical protein CRE_27118 [Caenorhabditis remanei]
Length = 930
Score = 33.8 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 73 HEMKRKMR-------ID-ENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDRFPRDRNVDR 124
E +R R + ++VL+ LT+ D E+S ++++ + ++ + + D
Sbjct: 485 DEFERYFREIQTYCDRNKDDVLKKLTVTFDDQERSSEDVKKKNEDESTEEKEAENEDEDV 544
Query: 125 KQHVSEEK 132
+ SEE
Sbjct: 545 EPETSEES 552
>gi|326678098|ref|XP_002666178.2| PREDICTED: hypothetical protein LOC100331050 [Danio rerio]
Length = 1528
Score = 33.4 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 47/128 (36%), Gaps = 23/128 (17%)
Query: 15 SSQQIKDTIGQYQSLIQENGG---EVRLVNELGM-RTIAYRIRKNRKAYYVFMNIASPPA 70
+Q+ + + + ++++ NGG + ++ R K RK + M
Sbjct: 869 DQKQVSELLEKINNMVKANGGSYYSCKRFRDIERDRQ-----NKERK--MLLMKHEEEKE 921
Query: 71 AIHEM--KRKMR-------IDENVLRSLTLLVDSHEQSPTL---TIQRHDRDDRNDRFPR 118
+ ++ + + R + V R T + + EQ ++ +Q ++ R R
Sbjct: 922 TMKKIMKEEQQRSKRSVDEFRDRVERYETEIKEKVEQERSVRDEMMQEREKWKREIEKER 981
Query: 119 DRNVDRKQ 126
+ + +
Sbjct: 982 QKRNEADE 989
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.181 0.582
Lambda K H
0.267 0.0549 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,147,134,607
Number of Sequences: 14124377
Number of extensions: 165385516
Number of successful extensions: 550073
Number of sequences better than 10.0: 2246
Number of HSP's better than 10.0 without gapping: 3622
Number of HSP's successfully gapped in prelim test: 414
Number of HSP's that attempted gapping in prelim test: 543797
Number of HSP's gapped (non-prelim): 5046
length of query: 135
length of database: 4,842,793,630
effective HSP length: 100
effective length of query: 35
effective length of database: 3,430,355,930
effective search space: 120062457550
effective search space used: 120062457550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 77 (33.8 bits)