HHsearch alignment for GI: 254780330 and conserved domain: CHL00077

>CHL00077 rps18 ribosomal protein S18.
Probab=99.94  E-value=3.5e-27  Score=173.40  Aligned_cols=78  Identities=40%  Similarity=0.727  Sum_probs=65.1

Q ss_pred             CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             76667132277777888854350388511446889999962899848550331748999999999999999704658676
Q gi|254780330|r    3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN   82 (83)
Q Consensus         3 ~~~p~p~~~~~~~~~~k~c~~~~~~~~~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLlPy~~   82 (83)
T Consensus         2 ~~~k~~~~k~~r~~rrk~~~~--~~~~~IDYKnv~lL~~Fise~GKIlprR~Tg~~ak~QR~l~kAIKrAR~lgLLPyv~   79 (86)
T CHL00077          2 DKSKRPFRKSKRSFRRRLPPI--QSGDRIDYKNMSLLSRFISEQGKILSRRVNRLTLKQQRLITKAIKQARILSLLPFLN   79 (86)
T ss_pred             CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEC
T ss_conf             744466554566656679999--988867766889999875888828085207879999999999999999963478001