HHsearch results for GI: 254780330 and protein with PDBid: 3bbn_R

>3bbn_R Ribosomal protein S18; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1

Probab=99.92  E-value=4.7e-27  Score=171.45  Aligned_cols=79  Identities=35%  Similarity=0.694  Sum_probs=70.4

Q ss_pred             CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             76667132277777888854350388511446889999962899848550331748999999999999999704658676
Q gi|254780330|r    3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN   82 (83)
Q Consensus         3 ~~~p~p~~~~~~~~~~k~c~~~~~~~~~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLlPy~~   82 (83)
                      |.++.|..+++...+++.|+++..  +.|||||+++|++|||++|+|+||++||+|++|||+|++|||+||+|||||||+
T Consensus         2 ~~~kr~f~k~~~~~rrr~~~~~~~--~~IDYKnv~lL~~Fis~~GkI~prr~TGl~~k~Qrkl~~aIKrAR~~gLLPyv~   79 (103)
T 3bbn_R            2 DKSKRPFIKSKRSFRRRLPPIQSG--DRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITSAIKQARILSLLPFLN   79 (103)
T ss_dssp             -----------------------C--CSSCCSCHHHHTTTSCSSSSCCCSSSTTCCTTTTTTTHHHHHHHTTTTSSCTTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             866676332467888789988878--866764889999866998728387338869999999999999999960677464


Q ss_pred             C
Q ss_conf             9
Q gi|254780330|r   83 L   83 (83)
Q Consensus        83 ~   83 (83)
                      .
T Consensus        80 ~   80 (103)
T 3bbn_R           80 N   80 (103)
T ss_dssp             C
T ss_pred             C
T ss_conf             6