HHsearch results for GI: 254780330 and protein with PDBid: 3i1m_R
>3i1m_R 30S ribosomal protein S18; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_R* 1vs5_R 3i1o_R 3i1q_R 3i1s_R 3i1z_R 3i21_R 3kc4_R 2qal_R* 1p6g_R 1p87_R 2aw7_R 2avy_R 2i2u_R 2i2p_R* 2qan_R* 2qb9_R* 2qbb_R* 2qbd_R 2qbf_R ...
Probab=99.95 E-value=4.5e-29 Score=182.74 Aligned_cols=71 Identities=49% Similarity=0.828 Sum_probs=67.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 77778888543503885114468899999628998485503317489999999999999997046586769
Q gi|254780330|r 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83 (83)
Q Consensus 13 ~~~~~~k~c~~~~~~~~~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLlPy~~~ 83 (83)
++++++|+|+||.+++++|||||+++|++||||+|+|+||++||+|++|||+|++|||+||+|||||||+-
T Consensus 3 r~~~rkk~C~~c~~~~~~idYKd~~lL~~Fis~~GkI~prr~TG~~~k~Qr~l~~aIkrAR~~gLlP~~~~ 73 (75)
T 3i1m_R 3 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDR 73 (75)
T ss_dssp -----------------CCSTTCHHHHGGGBCTTCCBCCHHHHCCCHHHHHHHHHHHHHHHTTTSSCSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 75678988988768998478659899998568887584774478699999999999999998536773547