BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780330|ref|YP_003064743.1| 30S ribosomal protein S18
[Candidatus Liberibacter asiaticus str. psy62]
(83 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780330|ref|YP_003064743.1| 30S ribosomal protein S18 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040007|gb|ACT56803.1| 30S ribosomal protein S18 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 83
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK
Sbjct: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
Query: 61 KQRELAKAIKRARYLGLIAYVNL 83
KQRELAKAIKRARYLGLIAYVNL
Sbjct: 61 KQRELAKAIKRARYLGLIAYVNL 83
>gi|315122245|ref|YP_004062734.1| 30S ribosomal protein S18 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495647|gb|ADR52246.1| 30S ribosomal protein S18 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 84
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/79 (92%), Positives = 76/79 (96%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P PLLRRN+SHRRKSCP SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS KKQRE
Sbjct: 6 SPAPLLRRNMSHRRKSCPFSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSQKKQRE 65
Query: 65 LAKAIKRARYLGLIAYVNL 83
LAKAIKRARYLGLIAYVN+
Sbjct: 66 LAKAIKRARYLGLIAYVNI 84
>gi|227821459|ref|YP_002825429.1| 30S ribosomal protein S18 [Sinorhizobium fredii NGR234]
gi|254812951|sp|C3M9B0|RS18_RHISN RecName: Full=30S ribosomal protein S18
gi|227340458|gb|ACP24676.1| 30S ribosomal protein S18 [Sinorhizobium fredii NGR234]
Length = 82
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|15964890|ref|NP_385243.1| 30S ribosomal protein S18 [Sinorhizobium meliloti 1021]
gi|150395964|ref|YP_001326431.1| 30S ribosomal protein S18 [Sinorhizobium medicae WSM419]
gi|307300961|ref|ZP_07580730.1| ribosomal protein S18 [Sinorhizobium meliloti BL225C]
gi|307322231|ref|ZP_07601599.1| ribosomal protein S18 [Sinorhizobium meliloti AK83]
gi|20978707|sp|Q92QZ8|RS18_RHIME RecName: Full=30S ribosomal protein S18
gi|166222244|sp|A6U7G6|RS18_SINMW RecName: Full=30S ribosomal protein S18
gi|15074069|emb|CAC45716.1| Putative 30S ribosomal protein S18 [Sinorhizobium meliloti 1021]
gi|150027479|gb|ABR59596.1| ribosomal protein S18 [Sinorhizobium medicae WSM419]
gi|306892118|gb|EFN22936.1| ribosomal protein S18 [Sinorhizobium meliloti AK83]
gi|306903916|gb|EFN34502.1| ribosomal protein S18 [Sinorhizobium meliloti BL225C]
Length = 82
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ Y+
Sbjct: 60 KQRELAQAIKRARFLGLLPYI 80
>gi|222085435|ref|YP_002543965.1| ribosomal protein S18 [Agrobacterium radiobacter K84]
gi|254765402|sp|B9JCB8|RS18_AGRRK RecName: Full=30S ribosomal protein S18
gi|221722883|gb|ACM26039.1| ribosomal protein S18 [Agrobacterium radiobacter K84]
Length = 82
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+EV+ P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEVSSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|222148135|ref|YP_002549092.1| 30S ribosomal protein S18 [Agrobacterium vitis S4]
gi|254765403|sp|B9JUU1|RS18_AGRVS RecName: Full=30S ribosomal protein S18
gi|221735123|gb|ACM36086.1| 30S ribosomal protein S18 [Agrobacterium vitis S4]
Length = 82
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ + +RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSS-TVRRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|116251320|ref|YP_767158.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. viciae
3841]
gi|209548656|ref|YP_002280573.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|241203934|ref|YP_002975030.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|122988597|sp|Q1MJ11|RS18_RHIL3 RecName: Full=30S ribosomal protein S18
gi|229560056|sp|B5ZWC8|RS18_RHILW RecName: Full=30S ribosomal protein S18
gi|115255968|emb|CAK07049.1| putative 30S ribosomal protein S18 [Rhizobium leguminosarum bv.
viciae 3841]
gi|209534412|gb|ACI54347.1| ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|240857824|gb|ACS55491.1| ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 82
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E + P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSETSSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|86357077|ref|YP_468969.1| 30S ribosomal protein S18 [Rhizobium etli CFN 42]
gi|190891121|ref|YP_001977663.1| 30S ribosomal protein S18 [Rhizobium etli CIAT 652]
gi|123724812|sp|Q2KA94|RS18_RHIEC RecName: Full=30S ribosomal protein S18
gi|229560055|sp|B3PUT6|RS18_RHIE6 RecName: Full=30S ribosomal protein S18
gi|86281179|gb|ABC90242.1| 30S ribosomal protein S18 [Rhizobium etli CFN 42]
gi|190696400|gb|ACE90485.1| 30S ribosomal protein S18 [Rhizobium etli CIAT 652]
gi|327188000|gb|EGE55230.1| 30S ribosomal protein S18 [Rhizobium etli CNPAF512]
Length = 82
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E + P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEASSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|83311200|ref|YP_421464.1| 30S ribosomal protein S18 [Magnetospirillum magneticum AMB-1]
gi|123768010|sp|Q2W5H0|RS18_MAGMM RecName: Full=30S ribosomal protein S18
gi|82946041|dbj|BAE50905.1| Ribosomal protein S18 [Magnetospirillum magneticum AMB-1]
Length = 92
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG+GAP+IDYKDI+LL+RF+S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 20 RRPFFRRRKTCPFSGEGAPKIDYKDIKLLSRFISERGKIVPSRITAVSAKKQRELAQAIK 79
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 80 RARFLGLLPYV 90
>gi|319408306|emb|CBI81959.1| 30S ribosomal protein S18 [Bartonella schoenbuchensis R1]
Length = 82
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M E+ TP+ RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MIEINQTPV-RRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|319404042|emb|CBI77630.1| 30S ribosomal protein S18 [Bartonella rochalimae ATCC BAA-1498]
Length = 83
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T + RR HRRK+CP SG AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 2 MTDIQQTSI-RRPFHHRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 60
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 61 KQRELANAIKRARFLGLLPYV 81
>gi|300023234|ref|YP_003755845.1| ribosomal protein S18 [Hyphomicrobium denitrificans ATCC 51888]
gi|299525055|gb|ADJ23524.1| ribosomal protein S18 [Hyphomicrobium denitrificans ATCC 51888]
Length = 84
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Query: 1 MAEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
MAE+A + RR RRK+CP SG+GAP+IDYKD+R L R++S+RGKIVPSRI++VS
Sbjct: 1 MAEIASSGGGARRPFQRRRKTCPFSGEGAPKIDYKDVRTLGRYISERGKIVPSRITAVSA 60
Query: 60 KKQRELAKAIKRARYLGLIAYV 81
KKQRELA+AIKRAR+LGL+ YV
Sbjct: 61 KKQRELAQAIKRARFLGLLPYV 82
>gi|319405479|emb|CBI79098.1| 30S ribosomal protein S18 [Bartonella sp. AR 15-3]
Length = 82
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ TP RR HRRK+CP S AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDIHQTPT-RRPFHHRRKTCPFSSTNAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELATAIKRARFLGLLPYV 80
>gi|144899044|emb|CAM75908.1| 30S ribosomal protein S18 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 90
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 63/71 (88%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG+GAP+IDYKD +LL+RF+S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 18 RRPFFRRRKTCPFSGEGAPKIDYKDTKLLSRFISERGKIVPSRITAVSAKKQRELAQAIK 77
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 78 RARFLGLLPYV 88
>gi|319407054|emb|CBI80691.1| 30S ribosomal protein S18 [Bartonella sp. 1-1C]
Length = 82
Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T + RR HRRK+CP SG AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDIHQTSV-RRPFHHRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|13476509|ref|NP_108079.1| 30S ribosomal protein S18 [Mesorhizobium loti MAFF303099]
gi|260466964|ref|ZP_05813146.1| ribosomal protein S18 [Mesorhizobium opportunistum WSM2075]
gi|319784439|ref|YP_004143915.1| ribosomal protein S18 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|20978722|sp|Q984T9|RS18_RHILO RecName: Full=30S ribosomal protein S18
gi|14027270|dbj|BAB54224.1| 30S ribosomal protein S18 [Mesorhizobium loti MAFF303099]
gi|259029261|gb|EEW30555.1| ribosomal protein S18 [Mesorhizobium opportunistum WSM2075]
gi|317170327|gb|ADV13865.1| ribosomal protein S18 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 82
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|163759110|ref|ZP_02166196.1| 30S ribosomal protein S18 [Hoeflea phototrophica DFL-43]
gi|162283514|gb|EDQ33799.1| 30S ribosomal protein S18 [Hoeflea phototrophica DFL-43]
Length = 82
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|326529315|dbj|BAK01051.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 81
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQRELAKAIK
Sbjct: 9 RRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAKAIK 68
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 69 RARFLGLLPYV 79
>gi|153007913|ref|YP_001369128.1| 30S ribosomal protein S18 [Ochrobactrum anthropi ATCC 49188]
gi|239831324|ref|ZP_04679653.1| ribosomal protein S18 [Ochrobactrum intermedium LMG 3301]
gi|166220966|sp|A6WWE5|RS18_OCHA4 RecName: Full=30S ribosomal protein S18
gi|151559801|gb|ABS13299.1| ribosomal protein S18 [Ochrobactrum anthropi ATCC 49188]
gi|239823591|gb|EEQ95159.1| ribosomal protein S18 [Ochrobactrum intermedium LMG 3301]
Length = 82
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|319898717|ref|YP_004158810.1| 30S ribosomal protein S18 [Bartonella clarridgeiae 73]
gi|319402681|emb|CBI76227.1| 30S ribosomal protein S18 [Bartonella clarridgeiae 73]
Length = 82
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T + RR HRRK+CP SG AP+IDYKD +LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDINQTSV-RRPFHHRRKTCPFSGANAPKIDYKDTKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|58038780|ref|YP_190744.1| 30S ribosomal protein S18 [Gluconobacter oxydans 621H]
gi|81672744|sp|Q5FU58|RS18_GLUOX RecName: Full=30S ribosomal protein S18
gi|58001194|gb|AAW60088.1| SSU ribosomal protein S18P [Gluconobacter oxydans 621H]
Length = 96
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 24 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 83
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 84 RARFLALLPYV 94
>gi|258542090|ref|YP_003187523.1| 30S ribosomal protein S18 [Acetobacter pasteurianus IFO 3283-01]
gi|329114157|ref|ZP_08242919.1| 30S ribosomal protein S18 [Acetobacter pomorum DM001]
gi|256633168|dbj|BAH99143.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-01]
gi|256636225|dbj|BAI02194.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-03]
gi|256639280|dbj|BAI05242.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-07]
gi|256642334|dbj|BAI08289.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-22]
gi|256645389|dbj|BAI11337.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-26]
gi|256648444|dbj|BAI14385.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-32]
gi|256651497|dbj|BAI17431.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654488|dbj|BAI20415.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-12]
gi|326696233|gb|EGE47912.1| 30S ribosomal protein S18 [Acetobacter pomorum DM001]
Length = 91
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 79 RARFLALLPYV 89
>gi|17987764|ref|NP_540398.1| 30S ribosomal protein S18 [Brucella melitensis bv. 1 str. 16M]
gi|23501355|ref|NP_697482.1| 30S ribosomal protein S18 [Brucella suis 1330]
gi|62289439|ref|YP_221232.1| 30S ribosomal protein S18 [Brucella abortus bv. 1 str. 9-941]
gi|82699365|ref|YP_413939.1| 30S ribosomal protein S18 [Brucella melitensis biovar Abortus
2308]
gi|148560401|ref|YP_001258473.1| 30S ribosomal protein S18 [Brucella ovis ATCC 25840]
gi|161618425|ref|YP_001592312.1| 30S ribosomal protein S18 [Brucella canis ATCC 23365]
gi|189023689|ref|YP_001934457.1| 30S ribosomal protein S18 [Brucella abortus S19]
gi|225626962|ref|ZP_03785001.1| ribosomal protein S18 [Brucella ceti str. Cudo]
gi|225851990|ref|YP_002732223.1| 30S ribosomal protein S18 [Brucella melitensis ATCC 23457]
gi|237814927|ref|ZP_04593925.1| ribosomal protein S18 [Brucella abortus str. 2308 A]
gi|254688751|ref|ZP_05152005.1| 30S ribosomal protein S18 [Brucella abortus bv. 6 str. 870]
gi|254693234|ref|ZP_05155062.1| 30S ribosomal protein S18 [Brucella abortus bv. 3 str. Tulya]
gi|254696880|ref|ZP_05158708.1| 30S ribosomal protein S18 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701258|ref|ZP_05163086.1| 30S ribosomal protein S18 [Brucella suis bv. 5 str. 513]
gi|254703805|ref|ZP_05165633.1| 30S ribosomal protein S18 [Brucella suis bv. 3 str. 686]
gi|254707817|ref|ZP_05169645.1| 30S ribosomal protein S18 [Brucella pinnipedialis M163/99/10]
gi|254709601|ref|ZP_05171412.1| 30S ribosomal protein S18 [Brucella pinnipedialis B2/94]
gi|254712983|ref|ZP_05174794.1| 30S ribosomal protein S18 [Brucella ceti M644/93/1]
gi|254716663|ref|ZP_05178474.1| 30S ribosomal protein S18 [Brucella ceti M13/05/1]
gi|254718630|ref|ZP_05180441.1| 30S ribosomal protein S18 [Brucella sp. 83/13]
gi|254729784|ref|ZP_05188362.1| 30S ribosomal protein S18 [Brucella abortus bv. 4 str. 292]
gi|256031093|ref|ZP_05444707.1| 30S ribosomal protein S18 [Brucella pinnipedialis M292/94/1]
gi|256044170|ref|ZP_05447077.1| 30S ribosomal protein S18 [Brucella melitensis bv. 1 str. Rev.1]
gi|256060587|ref|ZP_05450755.1| 30S ribosomal protein S18 [Brucella neotomae 5K33]
gi|256112978|ref|ZP_05453881.1| 30S ribosomal protein S18 [Brucella melitensis bv. 3 str. Ether]
gi|256159166|ref|ZP_05456979.1| 30S ribosomal protein S18 [Brucella ceti M490/95/1]
gi|256254496|ref|ZP_05460032.1| 30S ribosomal protein S18 [Brucella ceti B1/94]
gi|256256998|ref|ZP_05462534.1| 30S ribosomal protein S18 [Brucella abortus bv. 9 str. C68]
gi|256264503|ref|ZP_05467035.1| predicted protein [Brucella melitensis bv. 2 str. 63/9]
gi|256368907|ref|YP_003106413.1| 30S ribosomal protein S18 [Brucella microti CCM 4915]
gi|260168224|ref|ZP_05755035.1| 30S ribosomal protein S18 [Brucella sp. F5/99]
gi|260545810|ref|ZP_05821551.1| predicted protein [Brucella abortus NCTC 8038]
gi|260563528|ref|ZP_05834014.1| predicted protein [Brucella melitensis bv. 1 str. 16M]
gi|260566942|ref|ZP_05837412.1| predicted protein [Brucella suis bv. 4 str. 40]
gi|260754230|ref|ZP_05866578.1| SSU ribosomal protein S18P [Brucella abortus bv. 6 str. 870]
gi|260757450|ref|ZP_05869798.1| SSU ribosomal protein S18P [Brucella abortus bv. 4 str. 292]
gi|260761275|ref|ZP_05873618.1| SSU ribosomal protein S18P [Brucella abortus bv. 2 str. 86/8/59]
gi|260883256|ref|ZP_05894870.1| SSU ribosomal protein S18P [Brucella abortus bv. 9 str. C68]
gi|261213477|ref|ZP_05927758.1| SSU ribosomal protein S18P [Brucella abortus bv. 3 str. Tulya]
gi|261218464|ref|ZP_05932745.1| SSU ribosomal protein S18P [Brucella ceti M13/05/1]
gi|261221670|ref|ZP_05935951.1| SSU ribosomal protein S18P [Brucella ceti B1/94]
gi|261315304|ref|ZP_05954501.1| SSU ribosomal protein S18P [Brucella pinnipedialis M163/99/10]
gi|261317129|ref|ZP_05956326.1| SSU ribosomal protein S18P [Brucella pinnipedialis B2/94]
gi|261320686|ref|ZP_05959883.1| SSU ribosomal protein S18P [Brucella ceti M644/93/1]
gi|261324583|ref|ZP_05963780.1| SSU ribosomal protein S18P [Brucella neotomae 5K33]
gi|261751797|ref|ZP_05995506.1| SSU ribosomal protein S18P [Brucella suis bv. 5 str. 513]
gi|261754452|ref|ZP_05998161.1| SSU ribosomal protein S18P [Brucella suis bv. 3 str. 686]
gi|261757685|ref|ZP_06001394.1| predicted protein [Brucella sp. F5/99]
gi|265983609|ref|ZP_06096344.1| SSU ribosomal protein S18P [Brucella sp. 83/13]
gi|265988167|ref|ZP_06100724.1| SSU ribosomal protein S18P [Brucella pinnipedialis M292/94/1]
gi|265990583|ref|ZP_06103140.1| SSU ribosomal protein S18P [Brucella melitensis bv. 1 str. Rev.1]
gi|265994413|ref|ZP_06106970.1| SSU ribosomal protein S18P [Brucella melitensis bv. 3 str. Ether]
gi|265997633|ref|ZP_06110190.1| SSU ribosomal protein S18P [Brucella ceti M490/95/1]
gi|297247851|ref|ZP_06931569.1| 30S ribosomal protein S18 [Brucella abortus bv. 5 str. B3196]
gi|306839850|ref|ZP_07472648.1| ribosomal protein S18 [Brucella sp. NF 2653]
gi|306842261|ref|ZP_07474924.1| ribosomal protein S18 [Brucella sp. BO2]
gi|306845083|ref|ZP_07477663.1| ribosomal protein S18 [Brucella sp. BO1]
gi|54039409|sp|P66454|RS18_BRUSU RecName: Full=30S ribosomal protein S18
gi|54042144|sp|P66453|RS18_BRUME RecName: Full=30S ribosomal protein S18
gi|75505331|sp|Q57ER3|RS18_BRUAB RecName: Full=30S ribosomal protein S18
gi|123740899|sp|Q2YMH0|RS18_BRUA2 RecName: Full=30S ribosomal protein S18
gi|166220928|sp|A5VP26|RS18_BRUO2 RecName: Full=30S ribosomal protein S18
gi|189029650|sp|A9M8X7|RS18_BRUC2 RecName: Full=30S ribosomal protein S18
gi|229559967|sp|B2S9V3|RS18_BRUA1 RecName: Full=30S ribosomal protein S18
gi|254765414|sp|C0RHG1|RS18_BRUMB RecName: Full=30S ribosomal protein S18
gi|17983486|gb|AAL52662.1| ssu ribosomal protein s18p [Brucella melitensis bv. 1 str. 16M]
gi|23347248|gb|AAN29397.1| ribosomal protein S18 [Brucella suis 1330]
gi|62195571|gb|AAX73871.1| RpsR, ribosomal protein s18 [Brucella abortus bv. 1 str. 9-941]
gi|82615466|emb|CAJ10435.1| Ribosomal protein S18 [Brucella melitensis biovar Abortus 2308]
gi|148371658|gb|ABQ61637.1| ribosomal protein S18 [Brucella ovis ATCC 25840]
gi|161335236|gb|ABX61541.1| ribosomal protein S18 [Brucella canis ATCC 23365]
gi|189019261|gb|ACD71983.1| Ribosomal protein S18 [Brucella abortus S19]
gi|225618619|gb|EEH15662.1| ribosomal protein S18 [Brucella ceti str. Cudo]
gi|225640355|gb|ACO00269.1| ribosomal protein S18 [Brucella melitensis ATCC 23457]
gi|237789764|gb|EEP63974.1| ribosomal protein S18 [Brucella abortus str. 2308 A]
gi|255999065|gb|ACU47464.1| 30S ribosomal protein S18 [Brucella microti CCM 4915]
gi|260097217|gb|EEW81092.1| predicted protein [Brucella abortus NCTC 8038]
gi|260153544|gb|EEW88636.1| predicted protein [Brucella melitensis bv. 1 str. 16M]
gi|260156460|gb|EEW91540.1| predicted protein [Brucella suis bv. 4 str. 40]
gi|260667768|gb|EEX54708.1| SSU ribosomal protein S18P [Brucella abortus bv. 4 str. 292]
gi|260671707|gb|EEX58528.1| SSU ribosomal protein S18P [Brucella abortus bv. 2 str. 86/8/59]
gi|260674338|gb|EEX61159.1| SSU ribosomal protein S18P [Brucella abortus bv. 6 str. 870]
gi|260872784|gb|EEX79853.1| SSU ribosomal protein S18P [Brucella abortus bv. 9 str. C68]
gi|260915084|gb|EEX81945.1| SSU ribosomal protein S18P [Brucella abortus bv. 3 str. Tulya]
gi|260920254|gb|EEX86907.1| SSU ribosomal protein S18P [Brucella ceti B1/94]
gi|260923553|gb|EEX90121.1| SSU ribosomal protein S18P [Brucella ceti M13/05/1]
gi|261293376|gb|EEX96872.1| SSU ribosomal protein S18P [Brucella ceti M644/93/1]
gi|261296352|gb|EEX99848.1| SSU ribosomal protein S18P [Brucella pinnipedialis B2/94]
gi|261300563|gb|EEY04060.1| SSU ribosomal protein S18P [Brucella neotomae 5K33]
gi|261304330|gb|EEY07827.1| SSU ribosomal protein S18P [Brucella pinnipedialis M163/99/10]
gi|261737669|gb|EEY25665.1| predicted protein [Brucella sp. F5/99]
gi|261741550|gb|EEY29476.1| SSU ribosomal protein S18P [Brucella suis bv. 5 str. 513]
gi|261744205|gb|EEY32131.1| SSU ribosomal protein S18P [Brucella suis bv. 3 str. 686]
gi|262552101|gb|EEZ08091.1| SSU ribosomal protein S18P [Brucella ceti M490/95/1]
gi|262765526|gb|EEZ11315.1| SSU ribosomal protein S18P [Brucella melitensis bv. 3 str. Ether]
gi|263001367|gb|EEZ13942.1| SSU ribosomal protein S18P [Brucella melitensis bv. 1 str. Rev.1]
gi|263094836|gb|EEZ18574.1| predicted protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660364|gb|EEZ30625.1| SSU ribosomal protein S18P [Brucella pinnipedialis M292/94/1]
gi|264662201|gb|EEZ32462.1| SSU ribosomal protein S18P [Brucella sp. 83/13]
gi|297175020|gb|EFH34367.1| 30S ribosomal protein S18 [Brucella abortus bv. 5 str. B3196]
gi|306274498|gb|EFM56293.1| ribosomal protein S18 [Brucella sp. BO1]
gi|306287641|gb|EFM59088.1| ribosomal protein S18 [Brucella sp. BO2]
gi|306405036|gb|EFM61317.1| ribosomal protein S18 [Brucella sp. NF 2653]
gi|326408486|gb|ADZ65551.1| Ribosomal protein S18 [Brucella melitensis M28]
gi|326538202|gb|ADZ86417.1| ribosomal protein S18 [Brucella melitensis M5-90]
Length = 82
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|312113718|ref|YP_004011314.1| ribosomal protein S18 [Rhodomicrobium vannielii ATCC 17100]
gi|311218847|gb|ADP70215.1| ribosomal protein S18 [Rhodomicrobium vannielii ATCC 17100]
Length = 83
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG+ AP IDYKD+RLL RF+S+RGKIVPSRI++VS KKQRELAKAIK
Sbjct: 11 RRPFYRRRKTCPFSGENAPVIDYKDVRLLQRFVSERGKIVPSRITAVSAKKQRELAKAIK 70
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 71 RARFLGLLPYV 81
>gi|159184609|ref|NP_529002.1| 30S ribosomal protein S18 [Agrobacterium tumefaciens str. C58]
gi|325292469|ref|YP_004278333.1| 30S ribosomal protein S18 [Agrobacterium sp. H13-3]
gi|23822149|sp|Q8UGE8|RS18_AGRT5 RecName: Full=30S ribosomal protein S18
gi|17739485|gb|AAL42103.1| 30S ribosomal protein S18 [Agrobacterium tumefaciens str. C58]
gi|325060322|gb|ADY64013.1| 30S ribosomal protein S18 [Agrobacterium sp. H13-3]
Length = 82
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 10 RRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAQAIK 69
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 70 RARFLGLLPYV 80
>gi|49475325|ref|YP_033366.1| 30S ribosomal protein S18 [Bartonella henselae str. Houston-1]
gi|59798706|sp|Q6G447|RS18_BARHE RecName: Full=30S ribosomal protein S18
gi|49238131|emb|CAF27339.1| 30S ribosomal protein s18 [Bartonella henselae str. Houston-1]
Length = 82
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M E+ T + RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI+++S K
Sbjct: 1 MTEMNQTAI-RRPFHRRRKTCPFSGTNAPKIDYKDIKLLQRYISERGKIVPSRITAISQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|114328879|ref|YP_746036.1| 30S ribosomal protein S18 [Granulibacter bethesdensis CGDNIH1]
gi|122326172|sp|Q0BPY9|RS18_GRABC RecName: Full=30S ribosomal protein S18
gi|114317053|gb|ABI63113.1| SSU ribosomal protein S18P [Granulibacter bethesdensis CGDNIH1]
Length = 91
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|49474087|ref|YP_032129.1| 30S ribosomal protein S18 [Bartonella quintana str. Toulouse]
gi|59798702|sp|Q6G061|RS18_BARQU RecName: Full=30S ribosomal protein S18
gi|49239591|emb|CAF25948.1| 30s ribosomal protein s18 [Bartonella quintana str. Toulouse]
Length = 82
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E+ T + RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEINQT-VTRRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
+QRELA AIKRAR+LGL+ YV
Sbjct: 60 RQRELANAIKRARFLGLLPYV 80
>gi|330993922|ref|ZP_08317852.1| 30S ribosomal protein S18 [Gluconacetobacter sp. SXCC-1]
gi|329758868|gb|EGG75382.1| 30S ribosomal protein S18 [Gluconacetobacter sp. SXCC-1]
Length = 91
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|296116662|ref|ZP_06835272.1| 30S ribosomal protein S18 [Gluconacetobacter hansenii ATCC 23769]
gi|295976874|gb|EFG83642.1| 30S ribosomal protein S18 [Gluconacetobacter hansenii ATCC 23769]
Length = 91
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPQIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|148260511|ref|YP_001234638.1| 30S ribosomal protein S18 [Acidiphilium cryptum JF-5]
gi|326403703|ref|YP_004283785.1| 30S ribosomal protein S18 [Acidiphilium multivorum AIU301]
gi|205556745|sp|A5FYN7|RS18_ACICJ RecName: Full=30S ribosomal protein S18
gi|146402192|gb|ABQ30719.1| SSU ribosomal protein S18P [Acidiphilium cryptum JF-5]
gi|325050565|dbj|BAJ80903.1| 30S ribosomal protein S18 [Acidiphilium multivorum AIU301]
Length = 95
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 23 RRPFYRRRKACPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELARAIK 82
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 83 RARFLALLPYV 93
>gi|162149102|ref|YP_001603563.1| 30S ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl
5]
gi|209545155|ref|YP_002277384.1| 30S ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl
5]
gi|254812942|sp|A9H1M6|RS18_GLUDA RecName: Full=30S ribosomal protein S18
gi|161787679|emb|CAP57275.1| putative 30S ribosomal protein S18 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532832|gb|ACI52769.1| ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl 5]
Length = 91
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR++ L+ Y+
Sbjct: 79 RARFMALLPYI 89
>gi|296532305|ref|ZP_06895044.1| 30S ribosomal protein S18 [Roseomonas cervicalis ATCC 49957]
gi|296267381|gb|EFH13267.1| 30S ribosomal protein S18 [Roseomonas cervicalis ATCC 49957]
Length = 93
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA AIK
Sbjct: 20 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSGKKQRELANAIK 79
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 80 RARFLALLPYV 90
>gi|110634267|ref|YP_674475.1| 30S ribosomal protein S18 [Mesorhizobium sp. BNC1]
gi|122965901|sp|Q11H15|RS18_MESSB RecName: Full=30S ribosomal protein S18
gi|110285251|gb|ABG63310.1| SSU ribosomal protein S18P [Chelativorans sp. BNC1]
Length = 82
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELARAIKRARFLGLLPYV 80
>gi|240850218|ref|YP_002971611.1| 30S ribosomal protein S18 [Bartonella grahamii as4aup]
gi|240267341|gb|ACS50929.1| 30S ribosomal protein S18 [Bartonella grahamii as4aup]
Length = 82
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS KKQRELA AIK
Sbjct: 10 RRPFHRRRKTCPFSGTNAPKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANAIK 69
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 70 RARFLGLLPYV 80
>gi|302383705|ref|YP_003819528.1| ribosomal protein S18 [Brevundimonas subvibrioides ATCC 15264]
gi|302194333|gb|ADL01905.1| ribosomal protein S18 [Brevundimonas subvibrioides ATCC 15264]
Length = 90
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 7/88 (7%)
Query: 1 MAEVAPTPLL-------RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSR 53
M + TP + RR + RRK CP +G+GAP+IDYKD++LL R++S+RGKIVPSR
Sbjct: 1 MTDTTSTPGMPVGSGSGRRPFNRRRKVCPFTGEGAPKIDYKDVKLLQRYISERGKIVPSR 60
Query: 54 ISSVSHKKQRELAKAIKRARYLGLIAYV 81
I++VS KQRELAKAIKRARYL L+ YV
Sbjct: 61 ITAVSQIKQRELAKAIKRARYLALLPYV 88
>gi|163868014|ref|YP_001609218.1| 30S ribosomal protein S18 [Bartonella tribocorum CIP 105476]
gi|189029667|sp|A9IRU1|RS18_BART1 RecName: Full=30S ribosomal protein S18
gi|161017665|emb|CAK01223.1| 30S ribosomal protein S18 [Bartonella tribocorum CIP 105476]
Length = 82
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS KKQRELA AIK
Sbjct: 10 RRPFHRRRKTCPFSGATAPKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANAIK 69
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 70 RARFLGLLPYV 80
>gi|254473485|ref|ZP_05086882.1| ribosomal protein S18 [Pseudovibrio sp. JE062]
gi|211957601|gb|EEA92804.1| ribosomal protein S18 [Pseudovibrio sp. JE062]
Length = 81
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 9 RRPFFRRRKTCPFSGANAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELARAIK 68
Query: 71 RARYLGLIAYV 81
RAR+LGL+ +V
Sbjct: 69 RARFLGLLPFV 79
>gi|163842734|ref|YP_001627138.1| 30S ribosomal protein S18 [Brucella suis ATCC 23445]
gi|189029668|sp|B0CKD8|RS18_BRUSI RecName: Full=30S ribosomal protein S18
gi|163673457|gb|ABY37568.1| ribosomal protein S18 [Brucella suis ATCC 23445]
Length = 82
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR R K+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRHKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|254418129|ref|ZP_05031853.1| ribosomal protein S18 [Brevundimonas sp. BAL3]
gi|196184306|gb|EDX79282.1| ribosomal protein S18 [Brevundimonas sp. BAL3]
Length = 92
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIK
Sbjct: 20 RRPFYRRRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSQKKQRELAKAIK 79
Query: 71 RARYLGLIAYV 81
RARYL L+ YV
Sbjct: 80 RARYLALLPYV 90
>gi|294851832|ref|ZP_06792505.1| 30S ribosomal protein S18 [Brucella sp. NVSL 07-0026]
gi|294820421|gb|EFG37420.1| 30S ribosomal protein S18 [Brucella sp. NVSL 07-0026]
Length = 82
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP S AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIPT-RRPFHRRRKTCPFSSANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|304392028|ref|ZP_07373970.1| ribosomal protein S18 [Ahrensia sp. R2A130]
gi|303296257|gb|EFL90615.1| ribosomal protein S18 [Ahrensia sp. R2A130]
Length = 82
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G+ AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 10 RRPFQRRRKTCPFTGENAPKIDYKDVKLLQRYISERGKIVPSRITAVSLKKQRELARAIK 69
Query: 71 RARYLGLIAYV 81
RAR+L LI YV
Sbjct: 70 RARFLALIPYV 80
>gi|298291082|ref|YP_003693021.1| ribosomal protein S18 [Starkeya novella DSM 506]
gi|296927593|gb|ADH88402.1| ribosomal protein S18 [Starkeya novella DSM 506]
Length = 88
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 16 RRPFFRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELAQAIK 75
Query: 71 RARYLGLIAYV 81
RAR+LGL+ +V
Sbjct: 76 RARFLGLLPFV 86
>gi|85708888|ref|ZP_01039954.1| 30S ribosomal protein S18 [Erythrobacter sp. NAP1]
gi|85690422|gb|EAQ30425.1| 30S ribosomal protein S18 [Erythrobacter sp. NAP1]
Length = 74
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKSCPFSGKDAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|332185156|ref|ZP_08386905.1| ribosomal protein S18 [Sphingomonas sp. S17]
gi|332014880|gb|EGI56936.1| ribosomal protein S18 [Sphingomonas sp. S17]
Length = 74
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP S K APRIDYKD+RLL F+S+RGKIVPSRI+SVS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFSAKDAPRIDYKDVRLLQGFVSERGKIVPSRITSVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ YV
Sbjct: 61 KRARHLGLLPYV 72
>gi|163797515|ref|ZP_02191466.1| Ribosomal protein S18 [alpha proteobacterium BAL199]
gi|159177264|gb|EDP61823.1| Ribosomal protein S18 [alpha proteobacterium BAL199]
Length = 84
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RR RRKSCP SG GAP IDYKD +LL+RF+S+RGKIVPSRI++VS KKQRE+A+AI
Sbjct: 11 VRRPFMRRRKSCPFSGTGAPIIDYKDTKLLSRFISERGKIVPSRITAVSAKKQREMARAI 70
Query: 70 KRARYLGLIAYV 81
KR+R+L L+ YV
Sbjct: 71 KRSRFLALLPYV 82
>gi|288958519|ref|YP_003448860.1| small subunit ribosomal protein S18 [Azospirillum sp. B510]
gi|288910827|dbj|BAI72316.1| small subunit ribosomal protein S18 [Azospirillum sp. B510]
Length = 89
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP IDYKD++LL+RF+S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 17 RRPFFRRRKTCPFSGANAPAIDYKDVKLLSRFISERGKIVPSRITAVSTKKQRELARAIK 76
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 77 RARFLALLPYV 87
>gi|326389001|ref|ZP_08210583.1| 30S ribosomal protein S18 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206601|gb|EGD57436.1| 30S ribosomal protein S18 [Novosphingobium nitrogenifigens DSM
19370]
Length = 74
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQREL++AI
Sbjct: 1 MARPFFRRRKSCPFSGKNAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELSQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|121602413|ref|YP_988808.1| 30S ribosomal protein S18 [Bartonella bacilliformis KC583]
gi|166220924|sp|A1US55|RS18_BARBK RecName: Full=30S ribosomal protein S18
gi|120614590|gb|ABM45191.1| ribosomal protein S18 [Bartonella bacilliformis KC583]
Length = 82
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 60/73 (82%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L RR + RRK+CP SG +IDYKDI+LL R++S+RGKIVPSRI++VS KKQRELA A
Sbjct: 8 LARRPFNRRRKTCPFSGTNVAKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANA 67
Query: 69 IKRARYLGLIAYV 81
IKRAR+LGL+ YV
Sbjct: 68 IKRARFLGLLPYV 80
>gi|296285060|ref|ZP_06863058.1| 30S ribosomal protein S18 [Citromicrobium bathyomarinum JL354]
Length = 74
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP SGK AP IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSGKNAPVIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ YV
Sbjct: 61 KRARHIGLLPYV 72
>gi|148553013|ref|YP_001260595.1| 30S ribosomal protein S18 [Sphingomonas wittichii RW1]
gi|205617566|sp|A5V2E1|RS18_SPHWW RecName: Full=30S ribosomal protein S18
gi|148498203|gb|ABQ66457.1| SSU ribosomal protein S18P [Sphingomonas wittichii RW1]
Length = 74
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP S K APRIDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARAFFRRRKSCPFSAKDAPRIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|87199436|ref|YP_496693.1| 30S ribosomal protein S18 [Novosphingobium aromaticivorans DSM
12444]
gi|123763556|sp|Q2G8G4|RS18_NOVAD RecName: Full=30S ribosomal protein S18
gi|87135117|gb|ABD25859.1| SSU ribosomal protein S18P [Novosphingobium aromaticivorans DSM
12444]
Length = 74
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQREL++AI
Sbjct: 1 MARPFFRRRKSCPFSGKNAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELSQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|295689696|ref|YP_003593389.1| 30S ribosomal protein S18 [Caulobacter segnis ATCC 21756]
gi|295431599|gb|ADG10771.1| ribosomal protein S18 [Caulobacter segnis ATCC 21756]
Length = 92
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 57/65 (87%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L
Sbjct: 26 RRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARFLA 85
Query: 77 LIAYV 81
L+ YV
Sbjct: 86 LLPYV 90
>gi|27379189|ref|NP_770718.1| 30S ribosomal protein S18 [Bradyrhizobium japonicum USDA 110]
gi|59798894|sp|Q89MW4|RS18_BRAJA RecName: Full=30S ribosomal protein S18
gi|27352340|dbj|BAC49343.1| 30S ribosomal protein S18 [Bradyrhizobium japonicum USDA 110]
Length = 79
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKSCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|154247048|ref|YP_001418006.1| 30S ribosomal protein S18 [Xanthobacter autotrophicus Py2]
gi|205618870|sp|A7IK06|RS18_XANP2 RecName: Full=30S ribosomal protein S18
gi|154161133|gb|ABS68349.1| ribosomal protein S18 [Xanthobacter autotrophicus Py2]
Length = 88
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQREL+ AIK
Sbjct: 16 RRPFFRRRKTCPFSGPNAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELSAAIK 75
Query: 71 RARYLGLIAYV 81
R+R+LGL+ +V
Sbjct: 76 RSRFLGLLPFV 86
>gi|294084212|ref|YP_003550970.1| 30S ribosomal protein S18 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663785|gb|ADE38886.1| ribosomal protein S18 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 84
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
LR+ + RRKSCP SG AP+IDYKD +LL R+ S+RGKI+PSRIS+VS KKQRELA AI
Sbjct: 11 LRKPFNRRRKSCPFSGANAPKIDYKDTKLLARYTSERGKIIPSRISAVSAKKQRELATAI 70
Query: 70 KRARYLGLIAYV 81
KR+R+L L+ YV
Sbjct: 71 KRSRFLALMPYV 82
>gi|16125914|ref|NP_420478.1| 30S ribosomal protein S18 [Caulobacter crescentus CB15]
gi|167646473|ref|YP_001684136.1| 30S ribosomal protein S18 [Caulobacter sp. K31]
gi|221234677|ref|YP_002517113.1| 30S ribosomal protein S18 [Caulobacter crescentus NA1000]
gi|20978733|sp|Q9A7Q2|RS18_CAUCR RecName: Full=30S ribosomal protein S18
gi|189029669|sp|B0SWL0|RS18_CAUSK RecName: Full=30S ribosomal protein S18
gi|254765418|sp|B8GVN5|RS18_CAUCN RecName: Full=30S ribosomal protein S18
gi|13423076|gb|AAK23646.1| ribosomal protein S18 [Caulobacter crescentus CB15]
gi|167348903|gb|ABZ71638.1| ribosomal protein S18 [Caulobacter sp. K31]
gi|220963849|gb|ACL95205.1| SSU ribosomal protein S18P [Caulobacter crescentus NA1000]
Length = 92
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 57/65 (87%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L
Sbjct: 26 RRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARFLA 85
Query: 77 LIAYV 81
L+ YV
Sbjct: 86 LLPYV 90
>gi|91977454|ref|YP_570113.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisB5]
gi|123721763|sp|Q135M7|RS18_RHOPS RecName: Full=30S ribosomal protein S18
gi|91683910|gb|ABE40212.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisB5]
Length = 79
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGTNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|323136068|ref|ZP_08071151.1| ribosomal protein S18 [Methylocystis sp. ATCC 49242]
gi|322399159|gb|EFY01678.1| ribosomal protein S18 [Methylocystis sp. ATCC 49242]
Length = 78
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 14 KSCPFSGANAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|83945280|ref|ZP_00957629.1| 30S ribosomal protein S18 [Oceanicaulis alexandrii HTCC2633]
gi|83851450|gb|EAP89306.1| 30S ribosomal protein S18 [Oceanicaulis alexandrii HTCC2633]
Length = 84
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
MAE++ + + RR RRK CP SG+ AP+IDYKDI+LL R++S+RGKIVPSRI++VS
Sbjct: 1 MAELSISNVPARRAFQRRRKVCPFSGENAPKIDYKDIKLLQRYMSERGKIVPSRITAVSA 60
Query: 60 KKQRELAKAIKRARYLGLIAY 80
KKQRELA+AIKRAR L L+ Y
Sbjct: 61 KKQRELARAIKRARVLALLPY 81
>gi|296444436|ref|ZP_06886401.1| ribosomal protein S18 [Methylosinus trichosporium OB3b]
gi|296258083|gb|EFH05145.1| ribosomal protein S18 [Methylosinus trichosporium OB3b]
Length = 78
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 14 KSCPFSGANAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|39936141|ref|NP_948417.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris CGA009]
gi|192291859|ref|YP_001992464.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris TIE-1]
gi|316933692|ref|YP_004108674.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris DX-1]
gi|59798743|sp|Q6N5A3|RS18_RHOPA RecName: Full=30S ribosomal protein S18; AltName: Full=RRP-S18
gi|229560057|sp|B3Q9T6|RS18_RHOPT RecName: Full=30S ribosomal protein S18
gi|39649995|emb|CAE28519.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris CGA009]
gi|192285608|gb|ACF01989.1| ribosomal protein S18 [Rhodopseudomonas palustris TIE-1]
gi|315601406|gb|ADU43941.1| ribosomal protein S18 [Rhodopseudomonas palustris DX-1]
Length = 79
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|158425931|ref|YP_001527223.1| 30S ribosomal protein S18 [Azorhizobium caulinodans ORS 571]
gi|205556908|sp|A8HVE8|RS18_AZOC5 RecName: Full=30S ribosomal protein S18
gi|158332820|dbj|BAF90305.1| ribosomal protein S18 [Azorhizobium caulinodans ORS 571]
Length = 85
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 58/65 (89%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQREL+ AIKRAR+LG
Sbjct: 19 RRKTCPFSGPNAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELSAAIKRARFLG 78
Query: 77 LIAYV 81
L+ +V
Sbjct: 79 LLPFV 83
>gi|85374300|ref|YP_458362.1| 30S ribosomal protein S18 [Erythrobacter litoralis HTCC2594]
gi|123099521|sp|Q2N9S6|RS18_ERYLH RecName: Full=30S ribosomal protein S18
gi|84787383|gb|ABC63565.1| ribosomal protein S18 [Erythrobacter litoralis HTCC2594]
Length = 74
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP+IDYKD RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKNAPKIDYKDTRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|83591753|ref|YP_425505.1| 30S ribosomal protein S18 [Rhodospirillum rubrum ATCC 11170]
gi|123753309|sp|Q2RXC7|RS18_RHORT RecName: Full=30S ribosomal protein S18
gi|83574667|gb|ABC21218.1| SSU ribosomal protein S18P [Rhodospirillum rubrum ATCC 11170]
Length = 78
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG GAP+IDYKDI+LL RF+S+RGKIVPSRI++VS KKQRELA+AIKRAR+L L+
Sbjct: 14 KTCPFSGAGAPKIDYKDIKLLLRFVSERGKIVPSRITAVSAKKQRELARAIKRARFLSLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|149184753|ref|ZP_01863071.1| 30S ribosomal protein S18 [Erythrobacter sp. SD-21]
gi|148832073|gb|EDL50506.1| 30S ribosomal protein S18 [Erythrobacter sp. SD-21]
Length = 74
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKNAPAIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|86749583|ref|YP_486079.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris HaA2]
gi|115525312|ref|YP_782223.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisA53]
gi|122295614|sp|Q07LE1|RS18_RHOP5 RecName: Full=30S ribosomal protein S18
gi|123098720|sp|Q2IX92|RS18_RHOP2 RecName: Full=30S ribosomal protein S18
gi|86572611|gb|ABD07168.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris HaA2]
gi|115519259|gb|ABJ07243.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisA53]
Length = 79
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|114704793|ref|ZP_01437701.1| 30S ribosomal protein S18 [Fulvimarina pelagi HTCC2506]
gi|114539578|gb|EAU42698.1| 30S ribosomal protein S18 [Fulvimarina pelagi HTCC2506]
Length = 82
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++A P RR RRKS P SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDIAQLPT-RRPFHRRRKSDPFSGNDAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR LAKAIKRAR LGL+ YV
Sbjct: 60 NQRALAKAIKRARILGLLPYV 80
>gi|294011582|ref|YP_003545042.1| ribosomal protein S18 [Sphingobium japonicum UT26S]
gi|307294384|ref|ZP_07574228.1| ribosomal protein S18 [Sphingobium chlorophenolicum L-1]
gi|292674912|dbj|BAI96430.1| ribosomal protein S18 [Sphingobium japonicum UT26S]
gi|306880535|gb|EFN11752.1| ribosomal protein S18 [Sphingobium chlorophenolicum L-1]
Length = 74
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|92117879|ref|YP_577608.1| 30S ribosomal protein S18 [Nitrobacter hamburgensis X14]
gi|123083638|sp|Q1QKU9|RS18_NITHX RecName: Full=30S ribosomal protein S18
gi|91800773|gb|ABE63148.1| SSU ribosomal protein S18P [Nitrobacter hamburgensis X14]
Length = 79
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYISERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|217977084|ref|YP_002361231.1| 30S ribosomal protein S18 [Methylocella silvestris BL2]
gi|254812948|sp|B8ESH9|RS18_METSB RecName: Full=30S ribosomal protein S18
gi|217502460|gb|ACK49869.1| ribosomal protein S18 [Methylocella silvestris BL2]
Length = 80
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 16 KTCPFSGPNAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 75
Query: 79 AYV 81
YV
Sbjct: 76 PYV 78
>gi|85716345|ref|ZP_01047318.1| 30S ribosomal protein S18 [Nitrobacter sp. Nb-311A]
gi|85696861|gb|EAQ34746.1| 30S ribosomal protein S18 [Nitrobacter sp. Nb-311A]
Length = 79
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGSNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|75675884|ref|YP_318305.1| 30S ribosomal protein S18 [Nitrobacter winogradskyi Nb-255]
gi|123773250|sp|Q3SRY8|RS18_NITWN RecName: Full=30S ribosomal protein S18
gi|74420754|gb|ABA04953.1| SSU ribosomal protein S18P [Nitrobacter winogradskyi Nb-255]
Length = 79
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|182679260|ref|YP_001833406.1| 30S ribosomal protein S18 [Beijerinckia indica subsp. indica ATCC
9039]
gi|205557047|sp|B2IHD2|RS18_BEII9 RecName: Full=30S ribosomal protein S18
gi|182635143|gb|ACB95917.1| ribosomal protein S18 [Beijerinckia indica subsp. indica ATCC
9039]
Length = 80
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 16 KTCPFSGPNAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 75
Query: 79 AYV 81
YV
Sbjct: 76 PYV 78
>gi|170751790|ref|YP_001758050.1| 30S ribosomal protein S18 [Methylobacterium radiotolerans JCM
2831]
gi|205558300|sp|B1LYI3|RS18_METRJ RecName: Full=30S ribosomal protein S18
gi|170658312|gb|ACB27367.1| ribosomal protein S18 [Methylobacterium radiotolerans JCM 2831]
Length = 83
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 58/63 (92%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 19 KTCPFSGANAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 78
Query: 79 AYV 81
YV
Sbjct: 79 PYV 81
>gi|163853340|ref|YP_001641383.1| ribosomal protein S18 [Methylobacterium extorquens PA1]
gi|188583606|ref|YP_001927051.1| 30S ribosomal protein S18 [Methylobacterium populi BJ001]
gi|218532197|ref|YP_002423013.1| 30S ribosomal protein S18 [Methylobacterium chloromethanicum CM4]
gi|240140756|ref|YP_002965236.1| 30S ribosomal protein S18 [Methylobacterium extorquens AM1]
gi|254563266|ref|YP_003070361.1| 30S ribosomal protein S18 [Methylobacterium extorquens DM4]
gi|205558286|sp|A9W8G3|RS18_METEP RecName: Full=30S ribosomal protein S18
gi|205558291|sp|B1ZFQ7|RS18_METPB RecName: Full=30S ribosomal protein S18
gi|254812946|sp|B7L2P1|RS18_METC4 RecName: Full=30S ribosomal protein S18
gi|163664945|gb|ABY32312.1| ribosomal protein S18 [Methylobacterium extorquens PA1]
gi|179347104|gb|ACB82516.1| ribosomal protein S18 [Methylobacterium populi BJ001]
gi|218524500|gb|ACK85085.1| ribosomal protein S18 [Methylobacterium chloromethanicum CM4]
gi|240010733|gb|ACS41959.1| 30S ribosomal protein S18 [Methylobacterium extorquens AM1]
gi|254270544|emb|CAX26547.1| 30S ribosomal protein S18 [Methylobacterium extorquens DM4]
Length = 84
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 59/63 (93%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG+ AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKR+R+LGL+
Sbjct: 20 KSCPFSGENAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRSRFLGLL 79
Query: 79 AYV 81
YV
Sbjct: 80 PYV 82
>gi|94497409|ref|ZP_01303979.1| 30S ribosomal protein S18 [Sphingomonas sp. SKA58]
gi|94423040|gb|EAT08071.1| 30S ribosomal protein S18 [Sphingomonas sp. SKA58]
Length = 74
Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELASAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|328544026|ref|YP_004304135.1| 30S ribosomal protein S18 [polymorphum gilvum SL003B-26A1]
gi|326413770|gb|ADZ70833.1| 30S ribosomal protein S18 [Polymorphum gilvum SL003B-26A1]
Length = 82
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG GAP IDYKDIRLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+
Sbjct: 18 KTCPFSGAGAPAIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|154253799|ref|YP_001414623.1| 30S ribosomal protein S18 [Parvibaculum lavamentivorans DS-1]
gi|205616358|sp|A7HYI3|RS18_PARL1 RecName: Full=30S ribosomal protein S18
gi|154157749|gb|ABS64966.1| ribosomal protein S18 [Parvibaculum lavamentivorans DS-1]
Length = 81
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+L LI
Sbjct: 17 KTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLALI 76
Query: 79 AYV 81
YV
Sbjct: 77 PYV 79
>gi|329850896|ref|ZP_08265741.1| ribosomal protein S18 [Asticcacaulis biprosthecum C19]
gi|328841211|gb|EGF90782.1| ribosomal protein S18 [Asticcacaulis biprosthecum C19]
Length = 92
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 7/86 (8%)
Query: 3 EVAPTP-------LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
E APTP RR RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI+
Sbjct: 5 ETAPTPGAPVGSGPARRPFFRRRKVCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRIT 64
Query: 56 SVSHKKQRELAKAIKRARYLGLIAYV 81
+VS KKQRELAKAIKRAR+L L+ YV
Sbjct: 65 AVSQKKQRELAKAIKRARFLALLPYV 90
>gi|90423798|ref|YP_532168.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisB18]
gi|122995501|sp|Q215T7|RS18_RHOPB RecName: Full=30S ribosomal protein S18
gi|90105812|gb|ABD87849.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisB18]
Length = 79
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
R+R+LGL+ YV
Sbjct: 67 RSRFLGLLPYV 77
>gi|99080885|ref|YP_613039.1| 30S ribosomal protein S18 [Ruegeria sp. TM1040]
gi|126728811|ref|ZP_01744626.1| 30S ribosomal protein S18 [Sagittula stellata E-37]
gi|254460821|ref|ZP_05074237.1| ribosomal protein S18 [Rhodobacterales bacterium HTCC2083]
gi|259418563|ref|ZP_05742480.1| ribosomal protein S18 [Silicibacter sp. TrichCH4B]
gi|123252446|sp|Q1GHT9|RS18_SILST RecName: Full=30S ribosomal protein S18
gi|99037165|gb|ABF63777.1| SSU ribosomal protein S18P [Ruegeria sp. TM1040]
gi|126710741|gb|EBA09792.1| 30S ribosomal protein S18 [Sagittula stellata E-37]
gi|206677410|gb|EDZ41897.1| ribosomal protein S18 [Rhodobacteraceae bacterium HTCC2083]
gi|259344785|gb|EEW56639.1| ribosomal protein S18 [Silicibacter sp. TrichCH4B]
Length = 75
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG+ AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGENAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|103487385|ref|YP_616946.1| 30S ribosomal protein S18 [Sphingopyxis alaskensis RB2256]
gi|123253124|sp|Q1GRV9|RS18_SPHAL RecName: Full=30S ribosomal protein S18
gi|98977462|gb|ABF53613.1| SSU ribosomal protein S18P [Sphingopyxis alaskensis RB2256]
Length = 74
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP IDYKD+RLL +LS+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKDAPVIDYKDVRLLQGYLSERGKIVPSRITAVSTKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|118588140|ref|ZP_01545550.1| 30S ribosomal protein S18 [Stappia aggregata IAM 12614]
gi|118439762|gb|EAV46393.1| 30S ribosomal protein S18 [Stappia aggregata IAM 12614]
Length = 82
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+
Sbjct: 18 KTCPFSGTNAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|114762812|ref|ZP_01442244.1| 30S ribosomal protein S18 [Pelagibaca bermudensis HTCC2601]
gi|114544422|gb|EAU47429.1| 30S ribosomal protein S18 [Roseovarius sp. HTCC2601]
Length = 75
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
ELA+AIKRAR+L L+ YV
Sbjct: 56 ELARAIKRARFLALLPYV 73
>gi|315499768|ref|YP_004088571.1| ribosomal protein s18 [Asticcacaulis excentricus CB 48]
gi|315417780|gb|ADU14420.1| ribosomal protein S18 [Asticcacaulis excentricus CB 48]
Length = 92
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L L+
Sbjct: 28 KVCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQKKQRELAKAIKRARFLALL 87
Query: 79 AYV 81
YV
Sbjct: 88 PYV 90
>gi|294677546|ref|YP_003578161.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
gi|6226085|sp|O68127|RS18_RHOCA RecName: Full=30S ribosomal protein S18
gi|3128365|gb|AAC16217.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
gi|294476366|gb|ADE85754.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
Length = 75
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD+RLL R++S+RGKIVP+RI++VS KKQR
Sbjct: 1 MATKPFFRR-----RKVCPFSGDNAPKIDYKDVRLLQRYISERGKIVPARITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELAQAIKRARFLALLPY 72
>gi|209964875|ref|YP_002297790.1| ribosomal protein S18 [Rhodospirillum centenum SW]
gi|209958341|gb|ACI98977.1| ribosomal protein S18 [Rhodospirillum centenum SW]
Length = 89
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP IDYKD++LL+RF+S+RGKIVPSRI++VS KKQRELA+AIKRAR+L L+
Sbjct: 25 KTCPFSGPNAPAIDYKDVKLLSRFISERGKIVPSRITAVSAKKQRELARAIKRARFLALL 84
Query: 79 AYV 81
YV
Sbjct: 85 PYV 87
>gi|163731326|ref|ZP_02138773.1| 30S ribosomal protein S18 [Roseobacter litoralis Och 149]
gi|161394780|gb|EDQ19102.1| 30S ribosomal protein S18 [Roseobacter litoralis Och 149]
Length = 75
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MATKPFFRR-----RKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|85707088|ref|ZP_01038176.1| 30S ribosomal protein S18 [Roseovarius sp. 217]
gi|149203937|ref|ZP_01880905.1| 30S ribosomal protein S18 [Roseovarius sp. TM1035]
gi|85668374|gb|EAQ23247.1| 30S ribosomal protein S18 [Roseovarius sp. 217]
gi|149142379|gb|EDM30424.1| 30S ribosomal protein S18 [Roseovarius sp. TM1035]
Length = 75
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MATKPFFRR-----RKVCPFSGDSAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|220924504|ref|YP_002499806.1| 30S ribosomal protein S18 [Methylobacterium nodulans ORS 2060]
gi|254812947|sp|B8IED1|RS18_METNO RecName: Full=30S ribosomal protein S18
gi|219949111|gb|ACL59503.1| ribosomal protein S18 [Methylobacterium nodulans ORS 2060]
Length = 82
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LG +
Sbjct: 18 KTCPFSGPNAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGFL 77
Query: 79 AYV 81
YV
Sbjct: 78 PYV 80
>gi|56552122|ref|YP_162961.1| 30S ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762068|ref|ZP_04760152.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752353|ref|YP_003225246.1| 30S ribosomal protein S18 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|81677185|sp|Q5NN60|RS18_ZYMMO RecName: Full=30S ribosomal protein S18
gi|56543696|gb|AAV89850.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373534|gb|EER63121.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258551716|gb|ACV74662.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 74
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELARAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ ++
Sbjct: 61 KRARHIGLLPFI 72
>gi|86138735|ref|ZP_01057307.1| 30S ribosomal protein S18 [Roseobacter sp. MED193]
gi|126739374|ref|ZP_01755067.1| 30S ribosomal protein S18 [Roseobacter sp. SK209-2-6]
gi|159044730|ref|YP_001533524.1| 30S ribosomal protein S18 [Dinoroseobacter shibae DFL 12]
gi|163736681|ref|ZP_02144100.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis BS107]
gi|163742692|ref|ZP_02150077.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis 2.10]
gi|254463996|ref|ZP_05077407.1| ribosomal protein S18 [Rhodobacterales bacterium Y4I]
gi|254475704|ref|ZP_05089090.1| ribosomal protein S18 [Ruegeria sp. R11]
gi|254511035|ref|ZP_05123102.1| ribosomal protein S18 [Rhodobacteraceae bacterium KLH11]
gi|260433335|ref|ZP_05787306.1| ribosomal protein S18 [Silicibacter lacuscaerulensis ITI-1157]
gi|189029676|sp|A8LQQ6|RS18_DINSH RecName: Full=30S ribosomal protein S18
gi|85824382|gb|EAQ44585.1| 30S ribosomal protein S18 [Roseobacter sp. MED193]
gi|126719474|gb|EBA16183.1| 30S ribosomal protein S18 [Roseobacter sp. SK209-2-6]
gi|157912490|gb|ABV93923.1| 30S ribosomal protein S18 [Dinoroseobacter shibae DFL 12]
gi|161383947|gb|EDQ08331.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis 2.10]
gi|161390551|gb|EDQ14901.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis BS107]
gi|206684904|gb|EDZ45386.1| ribosomal protein S18 [Rhodobacterales bacterium Y4I]
gi|214029947|gb|EEB70782.1| ribosomal protein S18 [Ruegeria sp. R11]
gi|221534746|gb|EEE37734.1| ribosomal protein S18 [Rhodobacteraceae bacterium KLH11]
gi|260417163|gb|EEX10422.1| ribosomal protein S18 [Silicibacter lacuscaerulensis ITI-1157]
Length = 75
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|197105008|ref|YP_002130385.1| RpsR, ribosomal protein S18 [Phenylobacterium zucineum HLK1]
gi|196478428|gb|ACG77956.1| RpsR, ribosomal protein S18 [Phenylobacterium zucineum HLK1]
Length = 96
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L L+
Sbjct: 32 KVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARFLALL 91
Query: 79 AYV 81
YV
Sbjct: 92 PYV 94
>gi|110680236|ref|YP_683243.1| 30S ribosomal protein S18 [Roseobacter denitrificans OCh 114]
gi|123065436|sp|Q164N6|RS18_ROSDO RecName: Full=30S ribosomal protein S18
gi|109456352|gb|ABG32557.1| ribosomal protein S18 [Roseobacter denitrificans OCh 114]
Length = 75
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MASKPFFRR-----RKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|170740809|ref|YP_001769464.1| 30S ribosomal protein S18 [Methylobacterium sp. 4-46]
gi|205558315|sp|B0UL30|RS18_METS4 RecName: Full=30S ribosomal protein S18
gi|168195083|gb|ACA17030.1| ribosomal protein S18 [Methylobacterium sp. 4-46]
Length = 83
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LG +
Sbjct: 19 KTCPFSGPNAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGFL 78
Query: 79 AYV 81
YV
Sbjct: 79 PYV 81
>gi|83949661|ref|ZP_00958394.1| 30S ribosomal protein S18 [Roseovarius nubinhibens ISM]
gi|84503441|ref|ZP_01001501.1| 30S ribosomal protein S18 [Oceanicola batsensis HTCC2597]
gi|83837560|gb|EAP76856.1| 30S ribosomal protein S18 [Roseovarius nubinhibens ISM]
gi|84388228|gb|EAQ01180.1| 30S ribosomal protein S18 [Oceanicola batsensis HTCC2597]
Length = 75
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG+ AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGENAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|304319743|ref|YP_003853386.1| 30S ribosomal protein S18 [Parvularcula bermudensis HTCC2503]
gi|303298646|gb|ADM08245.1| 30S ribosomal protein S18 [Parvularcula bermudensis HTCC2503]
Length = 74
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK+CP SG+ AP+IDYKD +LL R++S++GKIVPSRIS+VS KKQRELA+AI
Sbjct: 1 MAKTFFRRRKTCPFSGEKAPKIDYKDPKLLGRYISEKGKIVPSRISAVSAKKQRELARAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y
Sbjct: 61 KRARFLALLPYTT 73
>gi|260425912|ref|ZP_05779891.1| ribosomal protein S18 [Citreicella sp. SE45]
gi|260420404|gb|EEX13655.1| ribosomal protein S18 [Citreicella sp. SE45]
Length = 75
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP IDYKD +LL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPAIDYKDTKLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
ELA+AIKRAR+L L+ YV
Sbjct: 56 ELARAIKRARFLALLPYV 73
>gi|329890142|ref|ZP_08268485.1| ribosomal protein S18 [Brevundimonas diminuta ATCC 11568]
gi|328845443|gb|EGF95007.1| ribosomal protein S18 [Brevundimonas diminuta ATCC 11568]
Length = 64
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRARYL L+ Y
Sbjct: 2 CPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARYLALLPY 61
Query: 81 V 81
V
Sbjct: 62 V 62
>gi|254504113|ref|ZP_05116264.1| ribosomal protein S18 [Labrenzia alexandrii DFL-11]
gi|222440184|gb|EEE46863.1| ribosomal protein S18 [Labrenzia alexandrii DFL-11]
Length = 82
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS KKQREL++AIKRAR LGL+
Sbjct: 18 KTCPFSGSNAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELSRAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|114768974|ref|ZP_01446600.1| 30S ribosomal protein S18 [alpha proteobacterium HTCC2255]
gi|114549891|gb|EAU52772.1| 30S ribosomal protein S18 [alpha proteobacterium HTCC2255]
Length = 75
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 55/64 (85%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRKSCP G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L
Sbjct: 9 RRKSCPFLGDNAPKIDYKDTKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARFLA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|56697143|ref|YP_167506.1| 30S ribosomal protein S18 [Ruegeria pomeroyi DSS-3]
gi|84684848|ref|ZP_01012748.1| 30S ribosomal protein S18 [Maritimibacter alkaliphilus HTCC2654]
gi|81676223|sp|Q5LR49|RS18_SILPO RecName: Full=30S ribosomal protein S18
gi|56678880|gb|AAV95546.1| ribosomal protein S18 [Ruegeria pomeroyi DSS-3]
gi|84667183|gb|EAQ13653.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2654]
Length = 75
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|83943160|ref|ZP_00955620.1| 30S ribosomal protein S18 [Sulfitobacter sp. EE-36]
gi|83954295|ref|ZP_00963015.1| 30S ribosomal protein S18 [Sulfitobacter sp. NAS-14.1]
gi|163746685|ref|ZP_02154042.1| 30S ribosomal protein S18 [Oceanibulbus indolifex HEL-45]
gi|254486472|ref|ZP_05099677.1| ribosomal protein S18 [Roseobacter sp. GAI101]
gi|83841332|gb|EAP80502.1| 30S ribosomal protein S18 [Sulfitobacter sp. NAS-14.1]
gi|83846168|gb|EAP84045.1| 30S ribosomal protein S18 [Sulfitobacter sp. EE-36]
gi|161379799|gb|EDQ04211.1| 30S ribosomal protein S18 [Oceanibulbus indolifex HEL-45]
gi|214043341|gb|EEB83979.1| ribosomal protein S18 [Roseobacter sp. GAI101]
Length = 75
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA+AIKRAR+L L+ Y
Sbjct: 56 ELARAIKRARFLALLPY 72
>gi|209885493|ref|YP_002289350.1| ribosomal protein S18 [Oligotropha carboxidovorans OM5]
gi|229560048|sp|B6JGW4|RS18_OLICO RecName: Full=30S ribosomal protein S18
gi|209873689|gb|ACI93485.1| ribosomal protein S18 [Oligotropha carboxidovorans OM5]
Length = 79
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+ID+KD +LL R++S+RGKIVPSRI++VS KQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGSNAPKIDFKDSKLLMRYVSERGKIVPSRITAVSALKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|299133697|ref|ZP_07026891.1| ribosomal protein S18 [Afipia sp. 1NLS2]
gi|298591533|gb|EFI51734.1| ribosomal protein S18 [Afipia sp. 1NLS2]
Length = 79
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+ID+KD +LL R++S+RGKIVPSRI++VS KQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDFKDSKLLMRYVSERGKIVPSRITAVSALKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|119383641|ref|YP_914697.1| 30S ribosomal protein S18 [Paracoccus denitrificans PD1222]
gi|166220967|sp|A1B0F7|RS18_PARDP RecName: Full=30S ribosomal protein S18
gi|119373408|gb|ABL69001.1| SSU ribosomal protein S18P [Paracoccus denitrificans PD1222]
Length = 75
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+L
Sbjct: 9 RRKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|146340285|ref|YP_001205333.1| 30S ribosomal protein S18 [Bradyrhizobium sp. ORS278]
gi|148255212|ref|YP_001239797.1| 30S ribosomal protein S18 [Bradyrhizobium sp. BTAi1]
gi|166220926|sp|A5EI97|RS18_BRASB RecName: Full=30S ribosomal protein S18
gi|166220927|sp|A4YT76|RS18_BRASO RecName: Full=30S ribosomal protein S18
gi|146193091|emb|CAL77102.1| 30S ribosomal subunit protein S18 [Bradyrhizobium sp. ORS278]
gi|146407385|gb|ABQ35891.1| SSU ribosomal protein S18P [Bradyrhizobium sp. BTAi1]
Length = 79
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 15 KTCPFSGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIKRARFLGLL 74
Query: 79 AYV 81
YV
Sbjct: 75 PYV 77
>gi|77463711|ref|YP_353215.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides 2.4.1]
gi|126462540|ref|YP_001043654.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides ATCC 17029]
gi|146277394|ref|YP_001167553.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides ATCC 17025]
gi|332558562|ref|ZP_08412884.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides WS8N]
gi|123591680|sp|Q3J1M0|RS18_RHOS4 RecName: Full=30S ribosomal protein S18
gi|166220980|sp|A3PKL6|RS18_RHOS1 RecName: Full=30S ribosomal protein S18
gi|166220981|sp|A4WS84|RS18_RHOS5 RecName: Full=30S ribosomal protein S18
gi|77388129|gb|ABA79314.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides 2.4.1]
gi|126104204|gb|ABN76882.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides ATCC 17029]
gi|145555635|gb|ABP70248.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides ATCC 17025]
gi|332276274|gb|EGJ21589.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides WS8N]
Length = 75
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA AIKRAR+L
Sbjct: 9 RRKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELAAAIKRARFLA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|221639577|ref|YP_002525839.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides KD131]
gi|254812952|sp|B9KJP1|RS18_RHOSK RecName: Full=30S ribosomal protein S18
gi|221160358|gb|ACM01338.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides KD131]
Length = 75
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA AIKRAR+L
Sbjct: 9 RRKVCPFSGDNAPVIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELAAAIKRARFLA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|260575000|ref|ZP_05843001.1| ribosomal protein S18 [Rhodobacter sp. SW2]
gi|259022622|gb|EEW25917.1| ribosomal protein S18 [Rhodobacter sp. SW2]
Length = 75
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP IDYKD R L R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MATKPFFRR-----RKVCPFSGDNAPAIDYKDTRTLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
ELA AIKRAR+L L+ Y
Sbjct: 56 ELATAIKRARFLALLPY 72
>gi|126725407|ref|ZP_01741249.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2150]
gi|126704611|gb|EBA03702.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2150]
Length = 75
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CP SG AP IDYKD R L R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+L
Sbjct: 9 RRKVCPFSGDNAPAIDYKDTRTLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|149913883|ref|ZP_01902415.1| 30S ribosomal protein S18 [Roseobacter sp. AzwK-3b]
gi|149812167|gb|EDM71998.1| 30S ribosomal protein S18 [Roseobacter sp. AzwK-3b]
Length = 75
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK CP SG AP IDYKD +LL R++S+RGKIVPSRI++VS KKQR
Sbjct: 1 MAAKPFFRR-----RKVCPFSGDNAPAIDYKDTKLLQRYISERGKIVPSRITAVSAKKQR 55
Query: 64 ELAKAIKRARYLGLIAY 80
EL++AIKRAR+L L+ Y
Sbjct: 56 ELSRAIKRARFLALLPY 72
>gi|114569762|ref|YP_756442.1| 30S ribosomal protein S18P [Maricaulis maris MCS10]
gi|122316234|sp|Q0AQD3|RS18_MARMM RecName: Full=30S ribosomal protein S18
gi|114340224|gb|ABI65504.1| SSU ribosomal protein S18P [Maricaulis maris MCS10]
Length = 84
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG+ AP ID+KD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 12 RRPFMRRRKVCPFSGENAPAIDFKDPKLLLRYMSERGKIVPSRITAVSAKKQRELARAIK 71
Query: 71 RARYLGLIAYV 81
RAR L L+ YV
Sbjct: 72 RARQLALLPYV 82
>gi|307946729|ref|ZP_07662064.1| ribosomal protein S18 [Roseibium sp. TrichSKD4]
gi|307770393|gb|EFO29619.1| ribosomal protein S18 [Roseibium sp. TrichSKD4]
Length = 82
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 53/61 (86%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP SG +P+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+ +
Sbjct: 20 CPFSGANSPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLLPF 79
Query: 81 V 81
V
Sbjct: 80 V 80
>gi|254294300|ref|YP_003060323.1| ribosomal protein S18 [Hirschia baltica ATCC 49814]
gi|254042831|gb|ACT59626.1| ribosomal protein S18 [Hirschia baltica ATCC 49814]
Length = 86
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG AP +DYKD++LL R++S++GKIVP+RI++VS KKQR L++AIK
Sbjct: 14 RRPFGRRRKVCPFSGDAAPALDYKDVKLLQRYISEKGKIVPARITAVSQKKQRRLSQAIK 73
Query: 71 RARYLGLIAY 80
RAR+L L+ Y
Sbjct: 74 RARHLALLPY 83
>gi|89054112|ref|YP_509563.1| 30S ribosomal protein S18 [Jannaschia sp. CCS1]
gi|123286752|sp|Q28RX4|RS18_JANSC RecName: Full=30S ribosomal protein S18
gi|88863661|gb|ABD54538.1| SSU ribosomal protein S18P [Jannaschia sp. CCS1]
Length = 75
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK+ P G+ AP+IDYKD RLL R++S+RGKIVPSRI++V K QR
Sbjct: 1 MAAKPFFRR-----RKTDPFEGENAPKIDYKDTRLLQRYISERGKIVPSRITAVGAKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LAKAIKRAR+L L+ Y
Sbjct: 56 ALAKAIKRARFLALLPYA 73
>gi|255263624|ref|ZP_05342966.1| ribosomal protein S18 [Thalassiobium sp. R2A62]
gi|255105959|gb|EET48633.1| ribosomal protein S18 [Thalassiobium sp. R2A62]
Length = 75
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RKS P G+ AP+IDYKD RLL R++S+RGKIVPSRI++V K QR
Sbjct: 1 MATKPFFRR-----RKSDPFEGENAPKIDYKDTRLLQRYISERGKIVPSRITAVGAKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ Y
Sbjct: 56 ALARAIKRARFLALLPYA 73
>gi|89068231|ref|ZP_01155641.1| 30S ribosomal protein S18 [Oceanicola granulosus HTCC2516]
gi|89046148|gb|EAR52206.1| 30S ribosomal protein S18 [Oceanicola granulosus HTCC2516]
Length = 75
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RK+ P G+ AP+IDYKD R L R++S+RGKIVPSRI++V K QR
Sbjct: 1 MAAKPFFRR-----RKTDPFEGENAPKIDYKDTRTLQRYVSERGKIVPSRITAVGSKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
+LA+AIKRAR+L L+ Y
Sbjct: 56 QLAQAIKRARFLALLPYA 73
>gi|71083407|ref|YP_266126.1| 30S ribosomal protein S18 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762170|ref|ZP_01264135.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1002]
gi|123748053|sp|Q4FMR6|RS18_PELUB RecName: Full=30S ribosomal protein S18
gi|71062520|gb|AAZ21523.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1062]
gi|91717972|gb|EAS84622.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1002]
Length = 92
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 58/77 (75%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A + + N +K+CPLS KGAP +DYK+IRLL +++S+ GKI+PSRI++VS KK
Sbjct: 16 SNFAKLSIFQPNKYKFKKTCPLSAKGAPEVDYKNIRLLKKYMSENGKILPSRITNVSQKK 75
Query: 62 QRELAKAIKRARYLGLI 78
QREL+ +IKRAR L LI
Sbjct: 76 QRELSLSIKRARNLALI 92
>gi|126735966|ref|ZP_01751710.1| ribosomal protein S18 [Roseobacter sp. CCS2]
gi|126714523|gb|EBA11390.1| ribosomal protein S18 [Roseobacter sp. CCS2]
Length = 75
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RKS P G AP+IDYKD RLL R++S+RGKIVP+RI++V K QR
Sbjct: 1 MATKPFFRR-----RKSDPFEGDNAPKIDYKDTRLLQRYISERGKIVPARITAVGAKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ Y
Sbjct: 56 ALARAIKRARFLALLPYA 73
>gi|254438780|ref|ZP_05052274.1| ribosomal protein S18 [Octadecabacter antarcticus 307]
gi|198254226|gb|EDY78540.1| ribosomal protein S18 [Octadecabacter antarcticus 307]
Length = 75
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RKS P G AP+IDYKD R L R++S+RGKIVPSRI++V K QR
Sbjct: 1 MATKPFFRR-----RKSDPFDGDNAPKIDYKDTRTLQRYVSERGKIVPSRITAVGAKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ Y
Sbjct: 56 ALARAIKRARFLALLPYA 73
>gi|254454485|ref|ZP_05067922.1| ribosomal protein S18 [Octadecabacter antarcticus 238]
gi|198268891|gb|EDY93161.1| ribosomal protein S18 [Octadecabacter antarcticus 238]
Length = 75
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RKS P G AP+IDYKD R L R++S+RGKIVPSRI++V K QR
Sbjct: 1 MATKPFFRR-----RKSDPFEGDNAPKIDYKDTRTLQRYVSERGKIVPSRITAVGAKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ Y
Sbjct: 56 ALARAIKRARFLALLPYA 73
>gi|84517318|ref|ZP_01004672.1| 30S ribosomal protein S18 [Loktanella vestfoldensis SKA53]
gi|84508798|gb|EAQ05261.1| 30S ribosomal protein S18 [Loktanella vestfoldensis SKA53]
Length = 75
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P RR RKS P G AP+IDYKD R L R++S+RGKIVP+RI++V K QR
Sbjct: 1 MATKPFFRR-----RKSDPFEGTDAPKIDYKDTRTLQRYISERGKIVPARITAVGSKNQR 55
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ Y
Sbjct: 56 ALARAIKRARFLALLPYA 73
>gi|254456332|ref|ZP_05069761.1| ribosomal protein S18 [Candidatus Pelagibacter sp. HTCC7211]
gi|207083334|gb|EDZ60760.1| ribosomal protein S18 [Candidatus Pelagibacter sp. HTCC7211]
Length = 90
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 58/77 (75%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A + + N +K+CPLS KGAP +DYK+IRLL +++S+ GKI+PSRI++VS KK
Sbjct: 14 SNFAKLSIFQPNKYKFKKNCPLSAKGAPAVDYKNIRLLKKYMSENGKILPSRITNVSQKK 73
Query: 62 QRELAKAIKRARYLGLI 78
QREL+ +IKRAR L L+
Sbjct: 74 QRELSLSIKRARNLALL 90
>gi|330813905|ref|YP_004358144.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
gi|327487000|gb|AEA81405.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
Length = 93
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L ++ + KSCPLSGKGAP I+YK+I+LL +++S KI+PSRI++VS KQR L+K
Sbjct: 19 LFNKSTAKPNKSCPLSGKGAPEINYKNIKLLKKYVSDTAKILPSRITNVSFGKQRALSKE 78
Query: 69 IKRARYLGLIAYV 81
IK+AR L L+ YV
Sbjct: 79 IKKARVLALMPYV 91
>gi|323142969|ref|ZP_08077677.1| ribosomal protein S18 [Succinatimonas hippei YIT 12066]
gi|322417242|gb|EFY07868.1| ribosomal protein S18 [Succinatimonas hippei YIT 12066]
Length = 76
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
HRRK C + +G IDYKD+ LL ++++ GKIVPSRI+ S K QR+LA AIKRARYL
Sbjct: 6 HRRKFCRFTAEGVTEIDYKDVALLKNYVTESGKIVPSRITGTSAKYQRQLATAIKRARYL 65
Query: 76 GLIAYVNL 83
L+ Y +L
Sbjct: 66 ALLPYTDL 73
>gi|114797845|ref|YP_760859.1| 30S ribosomal protein S18 [Hyphomonas neptunium ATCC 15444]
gi|123323135|sp|Q0C084|RS18_HYPNA RecName: Full=30S ribosomal protein S18
gi|114738019|gb|ABI76144.1| ribosomal protein S18 [Hyphomonas neptunium ATCC 15444]
Length = 85
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK P +G+ A IDYKD+++L R++S++GKIVPSRI++V+ K QR+LA+AIK
Sbjct: 13 RRPFGRRRKVDPFTGQHAQEIDYKDVKMLQRYISEKGKIVPSRITAVNLKNQRKLAQAIK 72
Query: 71 RARYLGLIAY 80
RAR L LI +
Sbjct: 73 RARMLALIPF 82
>gi|308048250|ref|YP_003911816.1| 30S ribosomal protein S18P [Ferrimonas balearica DSM 9799]
gi|307630440|gb|ADN74742.1| SSU ribosomal protein S18P [Ferrimonas balearica DSM 9799]
Length = 75
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVTEIDYKDIATLKNYVTESGKIVPSRITGTSAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|119776194|ref|YP_928934.1| 30S ribosomal protein S18 [Shewanella amazonensis SB2B]
gi|166222237|sp|A1SA58|RS18_SHEAM RecName: Full=30S ribosomal protein S18
gi|119768694|gb|ABM01265.1| SSU ribosomal protein S18P [Shewanella amazonensis SB2B]
Length = 75
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVAEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|148653438|ref|YP_001280531.1| 30S ribosomal protein S18 [Psychrobacter sp. PRwf-1]
gi|172048535|sp|A5WFZ0|RS18_PSYWF RecName: Full=30S ribosomal protein S18
gi|148572522|gb|ABQ94581.1| SSU ribosomal protein S18P [Psychrobacter sp. PRwf-1]
gi|332971480|gb|EGK10431.1| 50S ribosomal protein L21 [Psychrobacter sp. 1501(2011)]
Length = 75
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL +++S GKIVPSRI+ S+K QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSNKYQRQLATAIKQARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|24375416|ref|NP_719459.1| 30S ribosomal protein S18 [Shewanella oneidensis MR-1]
gi|113971590|ref|YP_735383.1| 30S ribosomal protein S18 [Shewanella sp. MR-4]
gi|114046198|ref|YP_736748.1| 30S ribosomal protein S18 [Shewanella sp. MR-7]
gi|117919155|ref|YP_868347.1| 30S ribosomal protein S18 [Shewanella sp. ANA-3]
gi|120600212|ref|YP_964786.1| 30S ribosomal protein S18 [Shewanella sp. W3-18-1]
gi|126175836|ref|YP_001051985.1| 30S ribosomal protein S18 [Shewanella baltica OS155]
gi|146291860|ref|YP_001182284.1| 30S ribosomal protein S18 [Shewanella putrefaciens CN-32]
gi|152999252|ref|YP_001364933.1| 30S ribosomal protein S18 [Shewanella baltica OS185]
gi|160873865|ref|YP_001553181.1| 30S ribosomal protein S18 [Shewanella baltica OS195]
gi|217971925|ref|YP_002356676.1| 30S ribosomal protein S18 [Shewanella baltica OS223]
gi|304411184|ref|ZP_07392799.1| ribosomal protein S18 [Shewanella baltica OS183]
gi|307306479|ref|ZP_07586222.1| ribosomal protein S18 [Shewanella baltica BA175]
gi|59798905|sp|Q8EAH4|RS18_SHEON RecName: Full=30S ribosomal protein S18
gi|122943538|sp|Q0HF41|RS18_SHESM RecName: Full=30S ribosomal protein S18
gi|123030904|sp|Q0HYW4|RS18_SHESR RecName: Full=30S ribosomal protein S18
gi|166222238|sp|A3D8Q3|RS18_SHEB5 RecName: Full=30S ribosomal protein S18
gi|166222239|sp|A6WJ81|RS18_SHEB8 RecName: Full=30S ribosomal protein S18
gi|166222241|sp|A4Y3F2|RS18_SHEPC RecName: Full=30S ribosomal protein S18
gi|166222242|sp|A0KT22|RS18_SHESA RecName: Full=30S ribosomal protein S18
gi|166222243|sp|A1RNI7|RS18_SHESW RecName: Full=30S ribosomal protein S18
gi|189029687|sp|A9L122|RS18_SHEB9 RecName: Full=30S ribosomal protein S18
gi|254812954|sp|B8E9N8|RS18_SHEB2 RecName: Full=30S ribosomal protein S18
gi|24350257|gb|AAN56903.1|AE015825_2 ribosomal protein S18 [Shewanella oneidensis MR-1]
gi|113886274|gb|ABI40326.1| SSU ribosomal protein S18P [Shewanella sp. MR-4]
gi|113887640|gb|ABI41691.1| SSU ribosomal protein S18P [Shewanella sp. MR-7]
gi|117611487|gb|ABK46941.1| SSU ribosomal protein S18P [Shewanella sp. ANA-3]
gi|120560305|gb|ABM26232.1| SSU ribosomal protein S18P [Shewanella sp. W3-18-1]
gi|125999041|gb|ABN63116.1| SSU ribosomal protein S18P [Shewanella baltica OS155]
gi|145563550|gb|ABP74485.1| SSU ribosomal protein S18P [Shewanella putrefaciens CN-32]
gi|151363870|gb|ABS06870.1| ribosomal protein S18 [Shewanella baltica OS185]
gi|160859387|gb|ABX47921.1| ribosomal protein S18 [Shewanella baltica OS195]
gi|217497060|gb|ACK45253.1| ribosomal protein S18 [Shewanella baltica OS223]
gi|304350377|gb|EFM14780.1| ribosomal protein S18 [Shewanella baltica OS183]
gi|306910770|gb|EFN41198.1| ribosomal protein S18 [Shewanella baltica BA175]
gi|315266092|gb|ADT92945.1| ribosomal protein S18 [Shewanella baltica OS678]
gi|319425094|gb|ADV53168.1| ribosomal protein S18 [Shewanella putrefaciens 200]
Length = 75
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVAEIDYKDIVTLKNYITESGKIVPSRITGTSAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|257453409|ref|ZP_05618704.1| ribosomal protein S18 [Enhydrobacter aerosaccus SK60]
gi|257449161|gb|EEV24109.1| ribosomal protein S18 [Enhydrobacter aerosaccus SK60]
Length = 75
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI +L +++++ GKIVPSRI+ S+K QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAEGITHIDYKDIEILKQYVTESGKIVPSRITGTSNKYQRQLAVAIKQARYLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|91791881|ref|YP_561532.1| 30S ribosomal protein S18 [Shewanella denitrificans OS217]
gi|123166502|sp|Q12RW7|RS18_SHEDO RecName: Full=30S ribosomal protein S18
gi|91713883|gb|ABE53809.1| SSU ribosomal protein S18P [Shewanella denitrificans OS217]
Length = 75
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTSEGVAEIDYKDIVTLKNYITESGKIVPSRITGTSAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|90408976|ref|ZP_01217108.1| ribosomal protein S18 [Psychromonas sp. CNPT3]
gi|90309924|gb|EAS38077.1| ribosomal protein S18 [Psychromonas sp. CNPT3]
Length = 75
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVSEIDYKDVTTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
LI Y +L
Sbjct: 67 LIPYTDL 73
>gi|71065895|ref|YP_264622.1| 30S ribosomal protein S18 [Psychrobacter arcticus 273-4]
gi|93005859|ref|YP_580296.1| 30S ribosomal protein S18 [Psychrobacter cryohalolentis K5]
gi|123264648|sp|Q1QBZ1|RS18_PSYCK RecName: Full=30S ribosomal protein S18
gi|123748116|sp|Q4FS20|RS18_PSYA2 RecName: Full=30S ribosomal protein S18
gi|71038880|gb|AAZ19188.1| SSU ribosomal protein S18P [Psychrobacter arcticus 273-4]
gi|92393537|gb|ABE74812.1| SSU ribosomal protein S18P [Psychrobacter cryohalolentis K5]
Length = 76
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL +++S GKIVPSRI+ S K QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSTKYQRQLATAIKQARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|254448156|ref|ZP_05061619.1| ribosomal protein S18 [gamma proteobacterium HTCC5015]
gi|198262282|gb|EDY86564.1| ribosomal protein S18 [gamma proteobacterium HTCC5015]
Length = 74
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G +IDYKD LL +++++ GKIVPSRI+ S K QR+LAKAIKRARY+
Sbjct: 7 RRKYCRFTAEGITQIDYKDTDLLKQYITETGKIVPSRITGTSAKYQRQLAKAIKRARYVA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|127514210|ref|YP_001095407.1| ribosomal protein S18 [Shewanella loihica PV-4]
gi|166222240|sp|A3QI50|RS18_SHELP RecName: Full=30S ribosomal protein S18
gi|126639505|gb|ABO25148.1| SSU ribosomal protein S18P [Shewanella loihica PV-4]
Length = 75
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ + K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVTEIDYKDIATLKNYITESGKIVPSRITGTNAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|90416567|ref|ZP_01224498.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2207]
gi|90331766|gb|EAS46994.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2207]
Length = 75
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C S +GAP IDYKD+ L ++S+ GKIVPSRI+ + QR+LA+AIKRARY+
Sbjct: 7 RRKFCRFSAEGAPEIDYKDLDTLKGYVSESGKIVPSRITGTKARYQRQLAEAIKRARYIA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|157373898|ref|YP_001472498.1| ribosomal protein S18 [Shewanella sediminis HAW-EB3]
gi|157963398|ref|YP_001503432.1| 30S ribosomal protein S18 [Shewanella pealeana ATCC 700345]
gi|163749305|ref|ZP_02156554.1| ribosomal protein S18 [Shewanella benthica KT99]
gi|167625579|ref|YP_001675873.1| 30S ribosomal protein S18 [Shewanella halifaxensis HAW-EB4]
gi|170728535|ref|YP_001762561.1| 30S ribosomal protein S18 [Shewanella woodyi ATCC 51908]
gi|212633591|ref|YP_002310116.1| 30S ribosomal protein S18 [Shewanella piezotolerans WP3]
gi|294139216|ref|YP_003555194.1| 30S ribosomal protein S18 [Shewanella violacea DSS12]
gi|189029688|sp|B0TUU7|RS18_SHEHH RecName: Full=30S ribosomal protein S18
gi|189029689|sp|A8H8L0|RS18_SHEPA RecName: Full=30S ribosomal protein S18
gi|189029690|sp|A8FR97|RS18_SHESH RecName: Full=30S ribosomal protein S18
gi|226735124|sp|B8CIQ3|RS18_SHEPW RecName: Full=30S ribosomal protein S18
gi|229560073|sp|B1KHY8|RS18_SHEWM RecName: Full=30S ribosomal protein S18
gi|157316272|gb|ABV35370.1| ribosomal protein S18 [Shewanella sediminis HAW-EB3]
gi|157848398|gb|ABV88897.1| ribosomal protein S18 [Shewanella pealeana ATCC 700345]
gi|161331024|gb|EDQ01950.1| ribosomal protein S18 [Shewanella benthica KT99]
gi|167355601|gb|ABZ78214.1| ribosomal protein S18 [Shewanella halifaxensis HAW-EB4]
gi|169813882|gb|ACA88466.1| ribosomal protein S18 [Shewanella woodyi ATCC 51908]
gi|212555075|gb|ACJ27529.1| Ribosomal protein S18 [Shewanella piezotolerans WP3]
gi|293325685|dbj|BAJ00416.1| ribosomal protein S18 [Shewanella violacea DSS12]
Length = 75
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ + K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVTEIDYKDIVTLKNYITESGKIVPSRITGTNAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|296113491|ref|YP_003627429.1| 30S ribosomal protein S18 [Moraxella catarrhalis RH4]
gi|295921185|gb|ADG61536.1| 30S ribosomal protein S18 [Moraxella catarrhalis RH4]
gi|326559388|gb|EGE09813.1| 30S ribosomal protein S18 [Moraxella catarrhalis 46P47B1]
gi|326559759|gb|EGE10169.1| 30S ribosomal protein S18 [Moraxella catarrhalis 7169]
gi|326565023|gb|EGE15223.1| 30S ribosomal protein S18 [Moraxella catarrhalis 103P14B1]
gi|326566025|gb|EGE16185.1| 30S ribosomal protein S18 [Moraxella catarrhalis 12P80B1]
gi|326568519|gb|EGE18591.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC1]
gi|326572422|gb|EGE22414.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC8]
gi|326572532|gb|EGE22521.1| 30S ribosomal protein S18 [Moraxella catarrhalis CO72]
gi|326574129|gb|EGE24077.1| 30S ribosomal protein S18 [Moraxella catarrhalis 101P30B1]
gi|326575565|gb|EGE25489.1| 30S ribosomal protein S18 [Moraxella catarrhalis O35E]
Length = 75
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL +++S+ GKI PSRI+ S K QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAEGITHIDYKDVELLKQYISENGKITPSRITGTSTKYQRQLAVAIKQARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|114564510|ref|YP_752024.1| 30S ribosomal protein S18 [Shewanella frigidimarina NCIMB 400]
gi|122298732|sp|Q07XS9|RS18_SHEFN RecName: Full=30S ribosomal protein S18
gi|114335803|gb|ABI73185.1| SSU ribosomal protein S18P [Shewanella frigidimarina NCIMB 400]
Length = 75
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S + QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTSEGVVEIDYKDIVTLKNYITESGKIVPSRITGTSARYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|289209095|ref|YP_003461161.1| ribosomal protein S18 [Thioalkalivibrio sp. K90mix]
gi|288944726|gb|ADC72425.1| ribosomal protein S18 [Thioalkalivibrio sp. K90mix]
Length = 74
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL F+++ GKIVPSR++ S K QR+LA A+KRARYL
Sbjct: 7 RRKYCKFTAEGIDYIDYKDLNLLKGFVTETGKIVPSRVTGTSAKYQRQLATAVKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|288941715|ref|YP_003443955.1| 30S ribosomal protein S18 [Allochromatium vinosum DSM 180]
gi|288897087|gb|ADC62923.1| ribosomal protein S18 [Allochromatium vinosum DSM 180]
Length = 74
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + +G IDYKD+ LL ++S+ GKIVPSRI+ S K QR+LA+AIKRARYL
Sbjct: 7 RKRYCRFTAEGITEIDYKDLNLLKAYISESGKIVPSRITGTSAKYQRQLAQAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|254499290|ref|ZP_05111964.1| 30S ribosomal protein S18 [Legionella drancourtii LLAP12]
gi|254351487|gb|EET10348.1| 30S ribosomal protein S18 [Legionella drancourtii LLAP12]
Length = 75
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C S +G IDYKDI LL ++S+ GKIVPSRI+ + QR+LAKAIK AR++G
Sbjct: 7 RKKMCRFSAEGGNEIDYKDINLLKNYISETGKIVPSRITGTQTRFQRQLAKAIKHARFIG 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|119947024|ref|YP_944704.1| ribosomal protein S18 [Psychromonas ingrahamii 37]
gi|166220979|sp|A1T040|RS18_PSYIN RecName: Full=30S ribosomal protein S18
gi|119865628|gb|ABM05105.1| SSU ribosomal protein S18P [Psychromonas ingrahamii 37]
Length = 75
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVSEIDYKDVVTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|77361356|ref|YP_340931.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas haloplanktis
TAC125]
gi|315125714|ref|YP_004067717.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas sp. SM9913]
gi|332535621|ref|ZP_08411387.1| 30S ribosomal protein S18 [Pseudoalteromonas haloplanktis
ANT/505]
gi|123588590|sp|Q3II81|RS18_PSEHT RecName: Full=30S ribosomal protein S18
gi|76876267|emb|CAI87489.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas haloplanktis
TAC125]
gi|315014228|gb|ADT67566.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas sp. SM9913]
gi|332034976|gb|EGI71498.1| 30S ribosomal protein S18 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 75
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRARYL
Sbjct: 7 RRKFCRFKAEGVQQIDYKDLATLRNYVTESGKIVPSRITGTSAKYQRQLATAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|88858916|ref|ZP_01133557.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas tunicata D2]
gi|88819142|gb|EAR28956.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas tunicata D2]
Length = 75
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRARYL
Sbjct: 7 RRKFCRFKAEGVQKIDYKDLATLRNYVTESGKIVPSRITGTSAKYQRQLAAAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|304312012|ref|YP_003811610.1| 30S ribosomal protein S18 [gamma proteobacterium HdN1]
gi|301797745|emb|CBL45967.1| 30S ribosomal protein S18 [gamma proteobacterium HdN1]
Length = 75
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL ++++ GKIVPSRI+ S + QR+LA A+KRAR+L
Sbjct: 7 RRKFCRFTAEGVQEIDYKDLELLKNYITETGKIVPSRITGTSARYQRQLATAVKRARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|119471281|ref|ZP_01613784.1| 30S ribosomal subunit protein S18 [Alteromonadales bacterium
TW-7]
gi|119445747|gb|EAW27030.1| 30S ribosomal subunit protein S18 [Alteromonadales bacterium
TW-7]
Length = 75
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRARYL
Sbjct: 7 RRKFCRFKAEGVQQIDYKDLATLRNYVTESGKIVPSRITGTSAKFQRQLATAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|21242371|ref|NP_641953.1| 30S ribosomal protein S18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78047218|ref|YP_363393.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|190575040|ref|YP_001972885.1| 30S ribosomal protein S18 [Stenotrophomonas maltophilia K279a]
gi|254524088|ref|ZP_05136143.1| ribosomal protein S18 [Stenotrophomonas sp. SKA14]
gi|285018509|ref|YP_003376220.1| 30s ribosomal subunit protein s18 [Xanthomonas albilineans GPE
PC73]
gi|325928161|ref|ZP_08189370.1| SSU ribosomal protein S18P [Xanthomonas perforans 91-118]
gi|23822134|sp|Q8PM13|RS18_XANAC RecName: Full=30S ribosomal protein S18
gi|123771403|sp|Q3BV20|RS18_XANC5 RecName: Full=30S ribosomal protein S18
gi|229560069|sp|B2FKJ8|RS18_STRMK RecName: Full=30S ribosomal protein S18
gi|21107808|gb|AAM36489.1| 30S ribosomal protein S18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035648|emb|CAJ23339.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|190012962|emb|CAQ46594.1| 30s ribosomal subunit protein S18 [Stenotrophomonas maltophilia
K279a]
gi|219721679|gb|EED40204.1| ribosomal protein S18 [Stenotrophomonas sp. SKA14]
gi|283473727|emb|CBA16230.1| probable 30s ribosomal subunit protein s18 [Xanthomonas
albilineans]
gi|325541457|gb|EGD12990.1| SSU ribosomal protein S18P [Xanthomonas perforans 91-118]
Length = 76
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KRAR+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRARFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|194366361|ref|YP_002028971.1| 30S ribosomal protein S18 [Stenotrophomonas maltophilia R551-3]
gi|229560068|sp|B4SP93|RS18_STRM5 RecName: Full=30S ribosomal protein S18
gi|194349165|gb|ACF52288.1| ribosomal protein S18 [Stenotrophomonas maltophilia R551-3]
Length = 76
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KRAR+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRARFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|52841821|ref|YP_095620.1| 30S ribosomal protein S18 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294365|ref|YP_126780.1| 30S ribosomal protein S18 [Legionella pneumophila str. Lens]
gi|54297504|ref|YP_123873.1| 30S ribosomal protein S18 [Legionella pneumophila str. Paris]
gi|148359128|ref|YP_001250335.1| 30S ribosomal protein S18 [Legionella pneumophila str. Corby]
gi|296107176|ref|YP_003618876.1| rpsR 30S ribosomal protein S18 [Legionella pneumophila 2300/99
Alcoy]
gi|81679230|sp|Q5WWL9|RS18_LEGPL RecName: Full=30S ribosomal protein S18
gi|81679473|sp|Q5X4X1|RS18_LEGPA RecName: Full=30S ribosomal protein S18
gi|81680465|sp|Q5ZV49|RS18_LEGPH RecName: Full=30S ribosomal protein S18
gi|166220957|sp|A5IC89|RS18_LEGPC RecName: Full=30S ribosomal protein S18
gi|52628932|gb|AAU27673.1| 30S ribosomal protein S18 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751289|emb|CAH12700.1| 30S ribosomal subunit protein S18 [Legionella pneumophila str.
Paris]
gi|53754197|emb|CAH15674.1| 30S ribosomal subunit protein S18 [Legionella pneumophila str.
Lens]
gi|148280901|gb|ABQ54989.1| 30S ribosomal protein S18 [Legionella pneumophila str. Corby]
gi|295649077|gb|ADG24924.1| rpsR 30S ribosomal protein S18 [Legionella pneumophila 2300/99
Alcoy]
gi|307610291|emb|CBW99855.1| 30S ribosomal subunit protein S18 [Legionella pneumophila 130b]
Length = 75
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C S +G IDYKDI LL ++++ GKIVPSRI+ + QR+LAKAIK AR++G
Sbjct: 7 RKKMCRFSAEGGNEIDYKDINLLKNYITETGKIVPSRITGTQTRFQRQLAKAIKHARFIG 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|326568102|gb|EGE18186.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC7]
Length = 75
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ LL +++S+ GKI PSRI+ S K QR+L AIK+ARYL
Sbjct: 7 RRKFCRFTAEGITHIDYKDVELLKQYISENGKITPSRITGTSTKYQRQLTVAIKQARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|329297941|ref|ZP_08255277.1| 30S ribosomal protein S18 [Plautia stali symbiont]
Length = 75
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTCAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|30023496|ref|NP_835127.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 14579]
gi|42784668|ref|NP_981915.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10987]
gi|47568671|ref|ZP_00239368.1| ribosomal protein S18 [Bacillus cereus G9241]
gi|206970197|ref|ZP_03231150.1| 30S ribosomal protein S18 [Bacillus cereus AH1134]
gi|206975889|ref|ZP_03236800.1| 30S ribosomal protein S18 [Bacillus cereus H3081.97]
gi|217962965|ref|YP_002341543.1| 30S ribosomal protein S18 [Bacillus cereus AH187]
gi|218232550|ref|YP_002370247.1| 30S ribosomal protein S18 [Bacillus cereus B4264]
gi|218900613|ref|YP_002449024.1| ribosomal protein S18 [Bacillus cereus G9842]
gi|222098949|ref|YP_002533007.1| 30S ribosomal protein s18 [Bacillus cereus Q1]
gi|228905416|ref|ZP_04069371.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 4222]
gi|228911311|ref|ZP_04075115.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 200]
gi|228924217|ref|ZP_04087488.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228942621|ref|ZP_04105153.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955723|ref|ZP_04117718.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961736|ref|ZP_04123339.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228968624|ref|ZP_04129607.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228975551|ref|ZP_04136103.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982187|ref|ZP_04142476.1| 30S ribosomal protein S18 [Bacillus thuringiensis Bt407]
gi|228988700|ref|ZP_04148785.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229051141|ref|ZP_04194685.1| 30S ribosomal protein S18 [Bacillus cereus AH676]
gi|229072937|ref|ZP_04206133.1| 30S ribosomal protein S18 [Bacillus cereus F65185]
gi|229082681|ref|ZP_04215135.1| 30S ribosomal protein S18 [Bacillus cereus Rock4-2]
gi|229112885|ref|ZP_04242416.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-15]
gi|229130718|ref|ZP_04259671.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-Cer4]
gi|229142221|ref|ZP_04270745.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST26]
gi|229148022|ref|ZP_04276361.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST24]
gi|229153631|ref|ZP_04281807.1| 30S ribosomal protein S18 [Bacillus cereus m1550]
gi|229159032|ref|ZP_04287088.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 4342]
gi|229164423|ref|ZP_04292351.1| 30S ribosomal protein S18 [Bacillus cereus R309803]
gi|229181718|ref|ZP_04309041.1| 30S ribosomal protein S18 [Bacillus cereus 172560W]
gi|229193723|ref|ZP_04320664.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10876]
gi|229199602|ref|ZP_04326262.1| 30S ribosomal protein S18 [Bacillus cereus m1293]
gi|296505900|ref|YP_003667600.1| 30S ribosomal protein S18 [Bacillus thuringiensis BMB171]
gi|59798780|sp|Q72WV5|RS18_BACC1 RecName: Full=30S ribosomal protein S18
gi|59798875|sp|Q814G7|RS18_BACCR RecName: Full=30S ribosomal protein S18
gi|226735108|sp|B7IS16|RS18_BACC2 RecName: Full=30S ribosomal protein S18
gi|226735109|sp|B7HGD2|RS18_BACC4 RecName: Full=30S ribosomal protein S18
gi|226735110|sp|B7HZF9|RS18_BACC7 RecName: Full=30S ribosomal protein S18
gi|254765410|sp|B9IT30|RS18_BACCQ RecName: Full=30S ribosomal protein S18
gi|29899057|gb|AAP12328.1| SSU ribosomal protein S18P [Bacillus cereus ATCC 14579]
gi|42740600|gb|AAS44523.1| ribosomal protein S18 [Bacillus cereus ATCC 10987]
gi|47554659|gb|EAL13013.1| ribosomal protein S18 [Bacillus cereus G9241]
gi|206734774|gb|EDZ51943.1| 30S ribosomal protein S18 [Bacillus cereus AH1134]
gi|206745983|gb|EDZ57379.1| 30S ribosomal protein S18 [Bacillus cereus H3081.97]
gi|217064909|gb|ACJ79159.1| ribosomal protein S18 [Bacillus cereus AH187]
gi|218160507|gb|ACK60499.1| ribosomal protein S18 [Bacillus cereus B4264]
gi|218540805|gb|ACK93199.1| ribosomal protein S18 [Bacillus cereus G9842]
gi|221243008|gb|ACM15718.1| ribosomal protein S18 [Bacillus cereus Q1]
gi|228583876|gb|EEK42034.1| 30S ribosomal protein S18 [Bacillus cereus m1293]
gi|228589748|gb|EEK47626.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10876]
gi|228601751|gb|EEK59249.1| 30S ribosomal protein S18 [Bacillus cereus 172560W]
gi|228619028|gb|EEK75926.1| 30S ribosomal protein S18 [Bacillus cereus R309803]
gi|228624451|gb|EEK81222.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 4342]
gi|228629817|gb|EEK86470.1| 30S ribosomal protein S18 [Bacillus cereus m1550]
gi|228635447|gb|EEK91938.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST24]
gi|228641239|gb|EEK97546.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST26]
gi|228652735|gb|EEL08620.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-Cer4]
gi|228670564|gb|EEL25877.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-15]
gi|228700626|gb|EEL53158.1| 30S ribosomal protein S18 [Bacillus cereus Rock4-2]
gi|228710183|gb|EEL62161.1| 30S ribosomal protein S18 [Bacillus cereus F65185]
gi|228722204|gb|EEL73605.1| 30S ribosomal protein S18 [Bacillus cereus AH676]
gi|228771012|gb|EEM19493.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228777539|gb|EEM25817.1| 30S ribosomal protein S18 [Bacillus thuringiensis Bt407]
gi|228784161|gb|EEM32188.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791053|gb|EEM38671.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228797930|gb|EEM44940.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228803951|gb|EEM50575.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817047|gb|EEM63140.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228835435|gb|EEM80805.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848329|gb|EEM93179.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 200]
gi|228854236|gb|EEM98939.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 4222]
gi|296326952|gb|ADH09880.1| 30S ribosomal protein S18 [Bacillus thuringiensis BMB171]
gi|324329423|gb|ADY24683.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|326943270|gb|AEA19166.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 77
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 9 AKRRKVCFFTANGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQ 68
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 69 MALLPYVG 76
>gi|114319745|ref|YP_741428.1| 30S ribosomal protein S18 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312361|sp|Q0AB49|RS18_ALHEH RecName: Full=30S ribosomal protein S18
gi|114226139|gb|ABI55938.1| SSU ribosomal protein S18P [Alkalilimnicola ehrlichii MLHE-1]
Length = 74
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ S + QR+LA+AIKRARYL
Sbjct: 7 RRKYCRFTAEGVKEIDYKDLNTLRNYVTETGKIVPSRITGTSARYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|121997453|ref|YP_001002240.1| 30S ribosomal protein S18 [Halorhodospira halophila SL1]
gi|166220954|sp|A1WUS6|RS18_HALHL RecName: Full=30S ribosomal protein S18
gi|121588858|gb|ABM61438.1| SSU ribosomal protein S18P [Halorhodospira halophila SL1]
Length = 74
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L +++ GKIVPSRI+ S + QR+LA+AIKRARYL
Sbjct: 7 RRKYCKFTAEGVKEIDYKDLNTLKNYITDTGKIVPSRITGTSARYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|282891669|ref|ZP_06300156.1| hypothetical protein pah_c188o044 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281498459|gb|EFB40791.1| hypothetical protein pah_c188o044 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 85
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK+CP + G IDYKD+ L++F+++RGKI+P RI+ VS Q+ LA+AIKRAR++
Sbjct: 18 KRKTCPFTAAGITEIDYKDVSTLSKFITERGKILPRRITGVSAYHQKRLAEAIKRARHIA 77
Query: 77 LIAYV 81
L+ +V
Sbjct: 78 LLPFV 82
>gi|229014638|ref|ZP_04171752.1| 30S ribosomal protein S18 [Bacillus mycoides DSM 2048]
gi|229020697|ref|ZP_04177424.1| 30S ribosomal protein S18 [Bacillus cereus AH1273]
gi|229026913|ref|ZP_04183236.1| 30S ribosomal protein S18 [Bacillus cereus AH1272]
gi|229065131|ref|ZP_04200424.1| 30S ribosomal protein S18 [Bacillus cereus AH603]
gi|229106064|ref|ZP_04236679.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-28]
gi|229136297|ref|ZP_04265044.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST196]
gi|229176148|ref|ZP_04303640.1| 30S ribosomal protein S18 [Bacillus cereus MM3]
gi|228607307|gb|EEK64637.1| 30S ribosomal protein S18 [Bacillus cereus MM3]
gi|228647169|gb|EEL03257.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST196]
gi|228677350|gb|EEL31612.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-28]
gi|228716160|gb|EEL67879.1| 30S ribosomal protein S18 [Bacillus cereus AH603]
gi|228734371|gb|EEL85042.1| 30S ribosomal protein S18 [Bacillus cereus AH1272]
gi|228740592|gb|EEL90863.1| 30S ribosomal protein S18 [Bacillus cereus AH1273]
gi|228746649|gb|EEL96538.1| 30S ribosomal protein S18 [Bacillus mycoides DSM 2048]
Length = 82
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 14 AKRRKVCFFTSNGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQ 73
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 74 MALLPYVG 81
>gi|30265490|ref|NP_847867.1| 30S ribosomal protein S18 [Bacillus anthracis str. Ames]
gi|47531058|ref|YP_022407.1| 30S ribosomal protein S18 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188309|ref|YP_031562.1| 30S ribosomal protein S18 [Bacillus anthracis str. Sterne]
gi|49481204|ref|YP_039462.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145280|ref|YP_086737.1| 30S ribosomal protein S18 [Bacillus cereus E33L]
gi|65317453|ref|ZP_00390412.1| COG0238: Ribosomal protein S18 [Bacillus anthracis str. A2012]
gi|118480500|ref|YP_897651.1| 30S ribosomal protein S18 [Bacillus thuringiensis str. Al Hakam]
gi|163943152|ref|YP_001648036.1| 30S ribosomal protein S18 [Bacillus weihenstephanensis KBAB4]
gi|165873035|ref|ZP_02217656.1| ribosomal protein S18 [Bacillus anthracis str. A0488]
gi|167635075|ref|ZP_02393392.1| ribosomal protein S18 [Bacillus anthracis str. A0442]
gi|167641758|ref|ZP_02400001.1| ribosomal protein S18 [Bacillus anthracis str. A0193]
gi|170689458|ref|ZP_02880648.1| ribosomal protein S18 [Bacillus anthracis str. A0465]
gi|170707550|ref|ZP_02898003.1| ribosomal protein S18 [Bacillus anthracis str. A0389]
gi|177655284|ref|ZP_02936838.1| ribosomal protein S18 [Bacillus anthracis str. A0174]
gi|190569300|ref|ZP_03022194.1| ribosomal protein S18 [Bacillus anthracis Tsiankovskii-I]
gi|196036074|ref|ZP_03103474.1| ribosomal protein S18 [Bacillus cereus W]
gi|196041980|ref|ZP_03109267.1| ribosomal protein S18 [Bacillus cereus NVH0597-99]
gi|196045471|ref|ZP_03112702.1| ribosomal protein S18 [Bacillus cereus 03BB108]
gi|218906664|ref|YP_002454498.1| ribosomal protein S18 [Bacillus cereus AH820]
gi|225867453|ref|YP_002752831.1| 30S ribosomal protein S18 [Bacillus cereus 03BB102]
gi|227818241|ref|YP_002818250.1| 30S ribosomal protein S18 [Bacillus anthracis str. CDC 684]
gi|228918084|ref|ZP_04081612.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930478|ref|ZP_04093478.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936752|ref|ZP_04099543.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949194|ref|ZP_04111462.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228994191|ref|ZP_04154091.1| 30S ribosomal protein S18 [Bacillus pseudomycoides DSM 12442]
gi|229000261|ref|ZP_04159830.1| 30S ribosomal protein S18 [Bacillus mycoides Rock3-17]
gi|229007785|ref|ZP_04165371.1| 30S ribosomal protein S18 [Bacillus mycoides Rock1-4]
gi|229035130|ref|ZP_04189076.1| 30S ribosomal protein S18 [Bacillus cereus AH1271]
gi|229087959|ref|ZP_04220067.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-44]
gi|229094583|ref|ZP_04225650.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-42]
gi|229099899|ref|ZP_04230822.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-29]
gi|229118962|ref|ZP_04248307.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-3]
gi|229124975|ref|ZP_04254149.1| 30S ribosomal protein S18 [Bacillus cereus 95/8201]
gi|229170175|ref|ZP_04297861.1| 30S ribosomal protein S18 [Bacillus cereus AH621]
gi|229187701|ref|ZP_04314837.1| 30S ribosomal protein S18 [Bacillus cereus BGSC 6E1]
gi|229604103|ref|YP_002869681.1| 30S ribosomal protein S18 [Bacillus anthracis str. A0248]
gi|254687087|ref|ZP_05150945.1| 30S ribosomal protein S18 [Bacillus anthracis str. CNEVA-9066]
gi|254724130|ref|ZP_05185915.1| 30S ribosomal protein S18 [Bacillus anthracis str. A1055]
gi|254735147|ref|ZP_05192857.1| 30S ribosomal protein S18 [Bacillus anthracis str. Western North
America USA6153]
gi|254742144|ref|ZP_05199831.1| 30S ribosomal protein S18 [Bacillus anthracis str. Kruger B]
gi|254755946|ref|ZP_05207978.1| 30S ribosomal protein S18 [Bacillus anthracis str. Vollum]
gi|254761374|ref|ZP_05213396.1| 30S ribosomal protein S18 [Bacillus anthracis str. Australia 94]
gi|300118826|ref|ZP_07056546.1| 30S ribosomal protein S18 [Bacillus cereus SJ1]
gi|301056946|ref|YP_003795157.1| 30S ribosomal protein S18 [Bacillus anthracis CI]
gi|59798636|sp|Q630D0|RS18_BACCZ RecName: Full=30S ribosomal protein S18
gi|59798712|sp|Q6HAG4|RS18_BACHK RecName: Full=30S ribosomal protein S18
gi|59798878|sp|Q81JI4|RS18_BACAN RecName: Full=30S ribosomal protein S18
gi|166220922|sp|A0RLQ1|RS18_BACAH RecName: Full=30S ribosomal protein S18
gi|226735107|sp|B7JIJ9|RS18_BACC0 RecName: Full=30S ribosomal protein S18
gi|229564239|sp|A9VTK8|RS18_BACWK RecName: Full=30S ribosomal protein S18
gi|254765406|sp|C3P3E3|RS18_BACAA RecName: Full=30S ribosomal protein S18
gi|254765407|sp|C3LGS9|RS18_BACAC RecName: Full=30S ribosomal protein S18
gi|254765408|sp|C1ER65|RS18_BACC3 RecName: Full=30S ribosomal protein S18
gi|30260168|gb|AAP29353.1| 30S ribosomal protein S18 [Bacillus anthracis str. Ames]
gi|47506206|gb|AAT34882.1| ribosomal protein S18 [Bacillus anthracis str. 'Ames Ancestor']
gi|49182236|gb|AAT57612.1| ribosomal protein S18 [Bacillus anthracis str. Sterne]
gi|49332760|gb|AAT63406.1| ribosomal protein S18 (30S ribosomal protein S18) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978749|gb|AAU20299.1| ribosomal protein S18 (30S ribosomal protein S18) [Bacillus
cereus E33L]
gi|118419725|gb|ABK88144.1| SSU ribosomal protein S18P [Bacillus thuringiensis str. Al Hakam]
gi|163865349|gb|ABY46408.1| ribosomal protein S18 [Bacillus weihenstephanensis KBAB4]
gi|164711247|gb|EDR16803.1| ribosomal protein S18 [Bacillus anthracis str. A0488]
gi|167510312|gb|EDR85715.1| ribosomal protein S18 [Bacillus anthracis str. A0193]
gi|167529549|gb|EDR92299.1| ribosomal protein S18 [Bacillus anthracis str. A0442]
gi|170127546|gb|EDS96420.1| ribosomal protein S18 [Bacillus anthracis str. A0389]
gi|170666560|gb|EDT17333.1| ribosomal protein S18 [Bacillus anthracis str. A0465]
gi|172080211|gb|EDT65303.1| ribosomal protein S18 [Bacillus anthracis str. A0174]
gi|190559607|gb|EDV13598.1| ribosomal protein S18 [Bacillus anthracis Tsiankovskii-I]
gi|195991241|gb|EDX55209.1| ribosomal protein S18 [Bacillus cereus W]
gi|196023678|gb|EDX62354.1| ribosomal protein S18 [Bacillus cereus 03BB108]
gi|196027235|gb|EDX65855.1| ribosomal protein S18 [Bacillus cereus NVH0597-99]
gi|218539261|gb|ACK91659.1| ribosomal protein S18 [Bacillus cereus AH820]
gi|225787551|gb|ACO27768.1| 30S ribosomal protein S18 [Bacillus cereus 03BB102]
gi|227005264|gb|ACP15007.1| 30S ribosomal protein S18 [Bacillus anthracis str. CDC 684]
gi|228595769|gb|EEK53453.1| 30S ribosomal protein S18 [Bacillus cereus BGSC 6E1]
gi|228613276|gb|EEK70415.1| 30S ribosomal protein S18 [Bacillus cereus AH621]
gi|228658476|gb|EEL14142.1| 30S ribosomal protein S18 [Bacillus cereus 95/8201]
gi|228664487|gb|EEL19983.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-3]
gi|228683514|gb|EEL37469.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-29]
gi|228688830|gb|EEL42661.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-42]
gi|228695344|gb|EEL48221.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-44]
gi|228728196|gb|EEL79226.1| 30S ribosomal protein S18 [Bacillus cereus AH1271]
gi|228753462|gb|EEM02914.1| 30S ribosomal protein S18 [Bacillus mycoides Rock1-4]
gi|228759593|gb|EEM08570.1| 30S ribosomal protein S18 [Bacillus mycoides Rock3-17]
gi|228765643|gb|EEM14297.1| 30S ribosomal protein S18 [Bacillus pseudomycoides DSM 12442]
gi|228810477|gb|EEM56830.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822961|gb|EEM68802.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829197|gb|EEM74834.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841564|gb|EEM86680.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268511|gb|ACQ50148.1| 30S ribosomal protein S18 [Bacillus anthracis str. A0248]
gi|298723794|gb|EFI64516.1| 30S ribosomal protein S18 [Bacillus cereus SJ1]
gi|300379115|gb|ADK08019.1| 30S ribosomal protein S18 [Bacillus cereus biovar anthracis str.
CI]
Length = 77
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 9 AKRRKVCFFTSNGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQ 68
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 69 MALLPYVG 76
>gi|119502819|ref|ZP_01624904.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2080]
gi|119461165|gb|EAW42255.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2080]
Length = 75
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L +++++ GKIVPSRI+ K QR+LA A+KRAR+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLETLKQYITETGKIVPSRITGTKAKYQRQLATAVKRARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai]
gi|16132024|ref|NP_418623.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|16763210|ref|NP_458827.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|24115555|ref|NP_710065.1| 30S ribosomal protein S18 [Shigella flexneri 2a str. 301]
gi|26251099|ref|NP_757139.1| 30S ribosomal protein S18 [Escherichia coli CFT073]
gi|29144689|ref|NP_808031.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|30065573|ref|NP_839744.1| 30S ribosomal protein S18 [Shigella flexneri 2a str. 2457T]
gi|37528390|ref|NP_931735.1| 30S ribosomal protein S18 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|56416184|ref|YP_153259.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62182837|ref|YP_219254.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|74314683|ref|YP_313102.1| 30S ribosomal protein S18 [Shigella sonnei Ss046]
gi|82546556|ref|YP_410503.1| 30S ribosomal protein S18 [Shigella boydii Sb227]
gi|82779400|ref|YP_405749.1| 30S ribosomal protein S18 [Shigella dysenteriae Sd197]
gi|89110922|ref|AP_004702.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. W3110]
gi|91213751|ref|YP_543737.1| 30S ribosomal protein S18 [Escherichia coli UTI89]
gi|110644559|ref|YP_672289.1| 30S ribosomal protein S18 [Escherichia coli 536]
gi|110808116|ref|YP_691636.1| 30S ribosomal protein S18 [Shigella flexneri 5 str. 8401]
gi|146310038|ref|YP_001175112.1| 30S ribosomal protein S18 [Enterobacter sp. 638]
gi|152973068|ref|YP_001338214.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|156932423|ref|YP_001436339.1| 30S ribosomal protein S18 [Cronobacter sakazakii ATCC BAA-894]
gi|157147826|ref|YP_001455145.1| 30S ribosomal protein S18 [Citrobacter koseri ATCC BAA-895]
gi|157158640|ref|YP_001465702.1| 30S ribosomal protein S18 [Escherichia coli E24377A]
gi|157163667|ref|YP_001460985.1| 30S ribosomal protein S18 [Escherichia coli HS]
gi|161505105|ref|YP_001572217.1| 30S ribosomal protein S18 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|161617665|ref|YP_001591630.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168263253|ref|ZP_02685226.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168464722|ref|ZP_02698625.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168751446|ref|ZP_02776468.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4113]
gi|168754774|ref|ZP_02779781.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4401]
gi|168760445|ref|ZP_02785452.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4501]
gi|168766482|ref|ZP_02791489.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4486]
gi|168774085|ref|ZP_02799092.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4196]
gi|168780635|ref|ZP_02805642.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4076]
gi|168784840|ref|ZP_02809847.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC869]
gi|168801858|ref|ZP_02826865.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC508]
gi|170021788|ref|YP_001726742.1| 30S ribosomal protein S18 [Escherichia coli ATCC 8739]
gi|170083647|ref|YP_001732967.1| 30S ribosomal protein S18 [Escherichia coli str. K-12 substr.
DH10B]
gi|170680020|ref|YP_001746596.1| 30S ribosomal protein S18 [Escherichia coli SMS-3-5]
gi|170766627|ref|ZP_02901080.1| ribosomal protein S18 [Escherichia albertii TW07627]
gi|183600324|ref|ZP_02961817.1| hypothetical protein PROSTU_03885 [Providencia stuartii ATCC
25827]
gi|187732798|ref|YP_001882891.1| 30S ribosomal protein S18 [Shigella boydii CDC 3083-94]
gi|188495594|ref|ZP_03002864.1| ribosomal protein S18 [Escherichia coli 53638]
gi|188535071|ref|YP_001908868.1| 30S ribosomal protein S18 [Erwinia tasmaniensis Et1/99]
gi|191165620|ref|ZP_03027460.1| ribosomal protein S18 [Escherichia coli B7A]
gi|191170703|ref|ZP_03032255.1| ribosomal protein S18 [Escherichia coli F11]
gi|193065998|ref|ZP_03047056.1| ribosomal protein S18 [Escherichia coli E22]
gi|193070855|ref|ZP_03051787.1| ribosomal protein S18 [Escherichia coli E110019]
gi|194426593|ref|ZP_03059147.1| ribosomal protein S18 [Escherichia coli B171]
gi|194434584|ref|ZP_03066841.1| ribosomal protein S18 [Shigella dysenteriae 1012]
gi|194439537|ref|ZP_03071611.1| ribosomal protein S18 [Escherichia coli 101-1]
gi|194446807|ref|YP_002043646.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194449942|ref|YP_002048435.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472416|ref|ZP_03078400.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194734283|ref|YP_002117333.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195935992|ref|ZP_03081374.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. EC4024]
gi|197249759|ref|YP_002149307.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197261817|ref|ZP_03161891.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287188|ref|YP_002153060.1| 30S ribosomal protein S18 [Proteus mirabilis HI4320]
gi|197365107|ref|YP_002144744.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242690|ref|YP_002218274.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387853|ref|ZP_03214465.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927186|ref|ZP_03218388.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205355148|ref|YP_002228949.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206579628|ref|YP_002240847.1| ribosomal protein S18 [Klebsiella pneumoniae 342]
gi|207859538|ref|YP_002246189.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|208809011|ref|ZP_03251348.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4206]
gi|208814274|ref|ZP_03255603.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4045]
gi|208819004|ref|ZP_03259324.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4042]
gi|209400527|ref|YP_002273743.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4115]
gi|209921692|ref|YP_002295776.1| 30S ribosomal protein S18 [Escherichia coli SE11]
gi|212709964|ref|ZP_03318092.1| hypothetical protein PROVALCAL_01015 [Providencia alcalifaciens
DSM 30120]
gi|213028576|ref|ZP_03343023.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213161635|ref|ZP_03347345.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419166|ref|ZP_03352232.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213428641|ref|ZP_03361391.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213582064|ref|ZP_03363890.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213609732|ref|ZP_03369558.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213649001|ref|ZP_03379054.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213864943|ref|ZP_03387062.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|215489546|ref|YP_002331977.1| 30S ribosomal protein S18 [Escherichia coli O127:H6 str.
E2348/69]
gi|217326502|ref|ZP_03442586.1| ribosomal protein S18 [Escherichia coli O157:H7 str. TW14588]
gi|218551472|ref|YP_002385264.1| 30S ribosomal protein S18 [Escherichia fergusonii ATCC 35469]
gi|218556754|ref|YP_002389668.1| 30S ribosomal protein S18 [Escherichia coli IAI1]
gi|218561361|ref|YP_002394274.1| 30S ribosomal protein S18 [Escherichia coli S88]
gi|218692585|ref|YP_002400797.1| 30S ribosomal protein S18 [Escherichia coli ED1a]
gi|218697953|ref|YP_002405620.1| 30S ribosomal protein S18 [Escherichia coli 55989]
gi|218702898|ref|YP_002410527.1| 30S ribosomal protein S18 [Escherichia coli IAI39]
gi|218707813|ref|YP_002415332.1| 30S ribosomal protein S18 [Escherichia coli UMN026]
gi|224586232|ref|YP_002640031.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|226326632|ref|ZP_03802150.1| hypothetical protein PROPEN_00482 [Proteus penneri ATCC 35198]
gi|227357118|ref|ZP_03841487.1| 30S ribosomal protein S18 [Proteus mirabilis ATCC 29906]
gi|227886754|ref|ZP_04004559.1| 30S ribosomal protein S18 [Escherichia coli 83972]
gi|237703870|ref|ZP_04534351.1| 30S ribosomal subunit protein S18 [Escherichia sp. 3_2_53FAA]
gi|237729131|ref|ZP_04559612.1| 30S ribosomal protein S18 [Citrobacter sp. 30_2]
gi|238755922|ref|ZP_04617250.1| 30S ribosomal protein S18 [Yersinia ruckeri ATCC 29473]
gi|238892682|ref|YP_002917416.1| 30S ribosomal protein S18 [Klebsiella pneumoniae NTUH-K2044]
gi|238903309|ref|YP_002929105.1| 30S ribosomal subunit protein S18 [Escherichia coli BW2952]
gi|238910550|ref|ZP_04654387.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|238918385|ref|YP_002931899.1| 30S ribosomal protein S18 [Edwardsiella ictaluri 93-146]
gi|242238248|ref|YP_002986429.1| ribosomal protein S18 [Dickeya dadantii Ech703]
gi|251788413|ref|YP_003003134.1| 30S ribosomal protein S18 [Dickeya zeae Ech1591]
gi|253775173|ref|YP_003038004.1| 30S ribosomal protein S18 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253991543|ref|YP_003042899.1| 30S ribosomal protein S18 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|254037222|ref|ZP_04871299.1| ribosomal protein S18 [Escherichia sp. 1_1_43]
gi|254164131|ref|YP_003047239.1| 30S ribosomal protein S18 [Escherichia coli B str. REL606]
gi|254796221|ref|YP_003081058.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. TW14359]
gi|256019847|ref|ZP_05433712.1| 30S ribosomal protein S18 [Shigella sp. D9]
gi|256025137|ref|ZP_05439002.1| 30S ribosomal protein S18 [Escherichia sp. 4_1_40B]
gi|259907191|ref|YP_002647547.1| 30S ribosomal protein S18 [Erwinia pyrifoliae Ep1/96]
gi|260599460|ref|YP_003212031.1| 30S ribosomal protein S18 [Cronobacter turicensis z3032]
gi|260847031|ref|YP_003224809.1| 30S ribosomal subunit protein S18 [Escherichia coli O103:H2 str.
12009]
gi|260858354|ref|YP_003232245.1| 30S ribosomal subunit protein S18 [Escherichia coli O26:H11 str.
11368]
gi|260870890|ref|YP_003237292.1| 30S ribosomal subunit protein S18 [Escherichia coli O111:H- str.
11128]
gi|261225322|ref|ZP_05939603.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255426|ref|ZP_05947959.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
FRIK966]
gi|261345205|ref|ZP_05972849.1| ribosomal protein S18 [Providencia rustigianii DSM 4541]
gi|262045370|ref|ZP_06018394.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|268592870|ref|ZP_06127091.1| ribosomal protein S18 [Providencia rettgeri DSM 1131]
gi|269137725|ref|YP_003294425.1| 30S ribosomal protein S18 [Edwardsiella tarda EIB202]
gi|271501889|ref|YP_003334915.1| 30S ribosomal protein S18 [Dickeya dadantii Ech586]
gi|283786876|ref|YP_003366741.1| 30S ribosomal subunit protein S18 [Citrobacter rodentium ICC168]
gi|283834822|ref|ZP_06354563.1| ribosomal protein S18 [Citrobacter youngae ATCC 29220]
gi|288937503|ref|YP_003441562.1| ribosomal protein S18 [Klebsiella variicola At-22]
gi|289811466|ref|ZP_06542095.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289829953|ref|ZP_06547404.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|290512241|ref|ZP_06551608.1| 30S ribosomal protein S18 [Klebsiella sp. 1_1_55]
gi|291285614|ref|YP_003502432.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. CB9615]
gi|291619075|ref|YP_003521817.1| RpsR [Pantoea ananatis LMG 20103]
gi|292489606|ref|YP_003532496.1| 30S ribosomal protein S18 [Erwinia amylovora CFBP1430]
gi|292898173|ref|YP_003537542.1| 30s ribosomal protein S18 [Erwinia amylovora ATCC 49946]
gi|293393197|ref|ZP_06637512.1| 50S ribosomal protein L21 [Serratia odorifera DSM 4582]
gi|293402827|ref|ZP_06646924.1| 30S ribosomal protein S18 [Escherichia coli FVEC1412]
gi|293407927|ref|ZP_06651767.1| 30S ribosomal protein S18 [Escherichia coli B354]
gi|293417705|ref|ZP_06660327.1| 30S ribosomal protein S18 [Escherichia coli B185]
gi|293476510|ref|ZP_06664918.1| 30S ribosomal protein S18 [Escherichia coli B088]
gi|294634472|ref|ZP_06713007.1| ribosomal protein S18 [Edwardsiella tarda ATCC 23685]
gi|296100965|ref|YP_003611111.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|298378356|ref|ZP_06988240.1| 30S ribosomal protein S18 [Escherichia coli FVEC1302]
gi|300816496|ref|ZP_07096717.1| ribosomal protein S18 [Escherichia coli MS 107-1]
gi|300821296|ref|ZP_07101444.1| ribosomal protein S18 [Escherichia coli MS 119-7]
gi|300899740|ref|ZP_07117965.1| ribosomal protein S18 [Escherichia coli MS 198-1]
gi|300906032|ref|ZP_07123756.1| ribosomal protein S18 [Escherichia coli MS 84-1]
gi|300918336|ref|ZP_07134937.1| ribosomal protein S18 [Escherichia coli MS 115-1]
gi|300922390|ref|ZP_07138510.1| ribosomal protein S18 [Escherichia coli MS 182-1]
gi|300928018|ref|ZP_07143571.1| ribosomal protein S18 [Escherichia coli MS 187-1]
gi|300940689|ref|ZP_07155250.1| ribosomal protein S18 [Escherichia coli MS 21-1]
gi|300949169|ref|ZP_07163211.1| ribosomal protein S18 [Escherichia coli MS 116-1]
gi|300955265|ref|ZP_07167658.1| ribosomal protein S18 [Escherichia coli MS 175-1]
gi|300987233|ref|ZP_07178062.1| ribosomal protein S18 [Escherichia coli MS 45-1]
gi|300988551|ref|ZP_07178747.1| ribosomal protein S18 [Escherichia coli MS 200-1]
gi|301024523|ref|ZP_07188198.1| ribosomal protein S18 [Escherichia coli MS 69-1]
gi|301028025|ref|ZP_07191309.1| ribosomal protein S18 [Escherichia coli MS 196-1]
gi|301045965|ref|ZP_07193148.1| ribosomal protein S18 [Escherichia coli MS 185-1]
gi|301302619|ref|ZP_07208749.1| ribosomal protein S18 [Escherichia coli MS 124-1]
gi|301325967|ref|ZP_07219388.1| ribosomal protein S18 [Escherichia coli MS 78-1]
gi|301646650|ref|ZP_07246516.1| ribosomal protein S18 [Escherichia coli MS 146-1]
gi|306815583|ref|ZP_07449732.1| 30S ribosomal protein S18 [Escherichia coli NC101]
gi|307132412|ref|YP_003884428.1| 30S ribosomal subunit protein S18 [Dickeya dadantii 3937]
gi|307140899|ref|ZP_07500255.1| 30S ribosomal protein S18 [Escherichia coli H736]
gi|307314849|ref|ZP_07594441.1| ribosomal protein S18 [Escherichia coli W]
gi|309787731|ref|ZP_07682342.1| ribosomal protein S18 [Shigella dysenteriae 1617]
gi|309797014|ref|ZP_07691414.1| ribosomal protein S18 [Escherichia coli MS 145-7]
gi|312965875|ref|ZP_07780101.1| ribosomal protein S18 [Escherichia coli 2362-75]
gi|312973990|ref|ZP_07788161.1| ribosomal protein S18 [Escherichia coli 1827-70]
gi|317049740|ref|YP_004117388.1| 30S ribosomal protein S18 [Pantoea sp. At-9b]
gi|317493585|ref|ZP_07952006.1| ribosomal protein S18 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|320539666|ref|ZP_08039330.1| 30S ribosomal subunit protein S18 [Serratia symbiotica str.
Tucson]
gi|330003415|ref|ZP_08304613.1| ribosomal protein S18 [Klebsiella sp. MS 92-3]
gi|331644954|ref|ZP_08346071.1| ribosomal protein S18 [Escherichia coli H736]
gi|331650327|ref|ZP_08351399.1| ribosomal protein S18 [Escherichia coli M605]
gi|331656030|ref|ZP_08357018.1| ribosomal protein S18 [Escherichia coli M718]
gi|331660777|ref|ZP_08361709.1| ribosomal protein S18 [Escherichia coli TA206]
gi|331665866|ref|ZP_08366760.1| ribosomal protein S18 [Escherichia coli TA143]
gi|331671111|ref|ZP_08371944.1| ribosomal protein S18 [Escherichia coli TA271]
gi|331671353|ref|ZP_08372151.1| ribosomal protein S18 [Escherichia coli TA280]
gi|331680332|ref|ZP_08380991.1| ribosomal protein S18 [Escherichia coli H591]
gi|331681220|ref|ZP_08381857.1| ribosomal protein S18 [Escherichia coli H299]
gi|332280987|ref|ZP_08393400.1| ribosomal protein S18 [Shigella sp. D9]
gi|67472372|sp|P0A7T7|RS18_ECOLI RecName: Full=30S ribosomal protein S18
gi|67472373|sp|P0A7T8|RS18_ECOL6 RecName: Full=30S ribosomal protein S18
gi|67472374|sp|P0A7T9|RS18_ECO57 RecName: Full=30S ribosomal protein S18
gi|67472375|sp|P0A7U0|RS18_PHOLL RecName: Full=30S ribosomal protein S18
gi|67472376|sp|P0A7U1|RS18_SALTI RecName: Full=30S ribosomal protein S18
gi|67472377|sp|P0A7U2|RS18_SHIFL RecName: Full=30S ribosomal protein S18
gi|75505387|sp|Q57GI9|RS18_SALCH RecName: Full=30S ribosomal protein S18
gi|81677980|sp|Q5PJ56|RS18_SALPA RecName: Full=30S ribosomal protein S18
gi|123047658|sp|Q0SX84|RS18_SHIF8 RecName: Full=30S ribosomal protein S18
gi|123084302|sp|Q1R358|RS18_ECOUT RecName: Full=30S ribosomal protein S18
gi|123343273|sp|Q0T9J1|RS18_ECOL5 RecName: Full=30S ribosomal protein S18
gi|123728279|sp|Q31TD3|RS18_SHIBS RecName: Full=30S ribosomal protein S18
gi|123728458|sp|Q328J7|RS18_SHIDS RecName: Full=30S ribosomal protein S18
gi|123759489|sp|Q3YUE5|RS18_SHISS RecName: Full=30S ribosomal protein S18
gi|166220942|sp|A8AMJ6|RS18_CITK8 RecName: Full=30S ribosomal protein S18
gi|166220951|sp|A7MM78|RS18_ENTS8 RecName: Full=30S ribosomal protein S18
gi|166220955|sp|A6THB3|RS18_KLEP7 RecName: Full=30S ribosomal protein S18
gi|167011188|sp|A7ZV73|RS18_ECO24 RecName: Full=30S ribosomal protein S18
gi|167011189|sp|A8A7U8|RS18_ECOHS RecName: Full=30S ribosomal protein S18
gi|167011190|sp|A4W5T1|RS18_ENT38 RecName: Full=30S ribosomal protein S18
gi|189029651|sp|A9N520|RS18_SALPB RecName: Full=30S ribosomal protein S18
gi|189029677|sp|B1IT04|RS18_ECOLC RecName: Full=30S ribosomal protein S18
gi|189029686|sp|A9MFK9|RS18_SALAR RecName: Full=30S ribosomal protein S18
gi|226735113|sp|B7MLK7|RS18_ECO45 RecName: Full=30S ribosomal protein S18
gi|226735114|sp|B7NTQ7|RS18_ECO7I RecName: Full=30S ribosomal protein S18
gi|226735115|sp|B7M9G4|RS18_ECO8A RecName: Full=30S ribosomal protein S18
gi|226735116|sp|B7NGD6|RS18_ECOLU RecName: Full=30S ribosomal protein S18
gi|226735117|sp|B1LQM1|RS18_ECOSM RecName: Full=30S ribosomal protein S18
gi|226735119|sp|B7LLY4|RS18_ESCF3 RecName: Full=30S ribosomal protein S18
gi|229559983|sp|B6I2A8|RS18_ECOSE RecName: Full=30S ribosomal protein S18
gi|229559984|sp|B2VCV9|RS18_ERWT9 RecName: Full=30S ribosomal protein S18
gi|229559986|sp|B5Z2K7|RS18_ECO5E RecName: Full=30S ribosomal protein S18
gi|229559987|sp|B1XDV2|RS18_ECODH RecName: Full=30S ribosomal protein S18
gi|229560040|sp|B5Y306|RS18_KLEP3 RecName: Full=30S ribosomal protein S18
gi|229560053|sp|B4F277|RS18_PROMH RecName: Full=30S ribosomal protein S18
gi|229560058|sp|B5F3B9|RS18_SALA4 RecName: Full=30S ribosomal protein S18
gi|229560059|sp|B5FSA3|RS18_SALDC RecName: Full=30S ribosomal protein S18
gi|229560060|sp|B5R0S0|RS18_SALEP RecName: Full=30S ribosomal protein S18
gi|229560061|sp|B5R9F0|RS18_SALG2 RecName: Full=30S ribosomal protein S18
gi|229560062|sp|B4TFD7|RS18_SALHS RecName: Full=30S ribosomal protein S18
gi|229560063|sp|B4T3F3|RS18_SALNS RecName: Full=30S ribosomal protein S18
gi|229560064|sp|B5BKL1|RS18_SALPK RecName: Full=30S ribosomal protein S18
gi|229560065|sp|B4TT35|RS18_SALSV RecName: Full=30S ribosomal protein S18
gi|229560074|sp|B2TY75|RS18_SHIB3 RecName: Full=30S ribosomal protein S18
gi|254765429|sp|B7UQL1|RS18_ECO27 RecName: Full=30S ribosomal protein S18
gi|254765430|sp|B7LCR3|RS18_ECO55 RecName: Full=30S ribosomal protein S18
gi|254765431|sp|B7MST2|RS18_ECO81 RecName: Full=30S ribosomal protein S18
gi|254812953|sp|C0Q6G0|RS18_SALPC RecName: Full=30S ribosomal protein S18
gi|259494808|sp|C4ZR79|RS18_ECOBW RecName: Full=30S ribosomal protein S18
gi|259494809|sp|C5BF78|RS18_EDWI9 RecName: Full=30S ribosomal protein S18
gi|25294828|pir||AI1052 30s ribosomal chain protein S18 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|116666565|pdb|1VS5|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|116666617|pdb|1VS7|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|257097339|pdb|3I1M|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097391|pdb|3I1O|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097443|pdb|3I1Q|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097497|pdb|3I1S|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097551|pdb|3I1Z|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097606|pdb|3I21|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560324|pdb|3KC4|R Chain R, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 3kcr
gi|308198704|pdb|3OR9|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308198725|pdb|3ORA|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634296|pdb|3IZV|V Chain V, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634321|pdb|3IZW|V Chain V, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|26111531|gb|AAN83713.1|AE016771_224 30S ribosomal protein S18 [Escherichia coli CFT073]
gi|42847|emb|CAA27654.1| unnamed protein product [Escherichia coli]
gi|537043|gb|AAA97098.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|1790646|gb|AAC77159.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|13364655|dbj|BAB38601.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
Sakai]
gi|16505518|emb|CAD06870.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|24054886|gb|AAN45772.1| 30S ribosomal subunit protein S18 [Shigella flexneri 2a str. 301]
gi|29140328|gb|AAO71891.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|30043837|gb|AAP19556.1| 30S ribosomal subunit protein S18 [Shigella flexneri 2a str.
2457T]
gi|36787828|emb|CAE16943.1| 30S ribosomal protein S18 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|56130441|gb|AAV79947.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62130470|gb|AAX68173.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73858160|gb|AAZ90867.1| 30S ribosomal subunit protein S18 [Shigella sonnei Ss046]
gi|81243548|gb|ABB64258.1| 30S ribosomal subunit protein S18 [Shigella dysenteriae Sd197]
gi|81247967|gb|ABB68675.1| 30S ribosomal subunit protein S18 [Shigella boydii Sb227]
gi|85676953|dbj|BAE78203.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K12
substr. W3110]
gi|91075325|gb|ABE10206.1| 30S ribosomal subunit protein S18 [Escherichia coli UTI89]
gi|110346151|gb|ABG72388.1| 30S ribosomal protein S18 [Escherichia coli 536]
gi|110617664|gb|ABF06331.1| 30S ribosomal subunit protein S18 [Shigella flexneri 5 str. 8401]
gi|145316914|gb|ABP59061.1| SSU ribosomal protein S18P [Enterobacter sp. 638]
gi|150957917|gb|ABR79947.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|156530677|gb|ABU75503.1| hypothetical protein ESA_00202 [Cronobacter sakazakii ATCC
BAA-894]
gi|157069347|gb|ABV08602.1| ribosomal protein S18 [Escherichia coli HS]
gi|157080670|gb|ABV20378.1| ribosomal protein S18 [Escherichia coli E24377A]
gi|157085031|gb|ABV14709.1| hypothetical protein CKO_03630 [Citrobacter koseri ATCC BAA-895]
gi|160866452|gb|ABX23075.1| hypothetical protein SARI_03239 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161367029|gb|ABX70797.1| hypothetical protein SPAB_05528 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|169756716|gb|ACA79415.1| ribosomal protein S18 [Escherichia coli ATCC 8739]
gi|169891482|gb|ACB05189.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. DH10B]
gi|170124065|gb|EDS92996.1| ribosomal protein S18 [Escherichia albertii TW07627]
gi|170517738|gb|ACB15916.1| ribosomal protein S18 [Escherichia coli SMS-3-5]
gi|187429790|gb|ACD09064.1| ribosomal protein S18 [Shigella boydii CDC 3083-94]
gi|187770314|gb|EDU34158.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4196]
gi|188014502|gb|EDU52624.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4113]
gi|188020113|gb|EDU58153.1| hypothetical protein PROSTU_03885 [Providencia stuartii ATCC
25827]
gi|188030113|emb|CAO97999.1| 30S ribosomal protein S18 [Erwinia tasmaniensis Et1/99]
gi|188490793|gb|EDU65896.1| ribosomal protein S18 [Escherichia coli 53638]
gi|189001716|gb|EDU70702.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4076]
gi|189357840|gb|EDU76259.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4401]
gi|189364286|gb|EDU82705.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4486]
gi|189368871|gb|EDU87287.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4501]
gi|189374715|gb|EDU93131.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC869]
gi|189376068|gb|EDU94484.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC508]
gi|190904315|gb|EDV64024.1| ribosomal protein S18 [Escherichia coli B7A]
gi|190908927|gb|EDV68514.1| ribosomal protein S18 [Escherichia coli F11]
gi|192926321|gb|EDV80957.1| ribosomal protein S18 [Escherichia coli E22]
gi|192955801|gb|EDV86272.1| ribosomal protein S18 [Escherichia coli E110019]
gi|194405470|gb|ACF65692.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408246|gb|ACF68465.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194415332|gb|EDX31600.1| ribosomal protein S18 [Escherichia coli B171]
gi|194417169|gb|EDX33281.1| ribosomal protein S18 [Shigella dysenteriae 1012]
gi|194421536|gb|EDX37549.1| ribosomal protein S18 [Escherichia coli 101-1]
gi|194458780|gb|EDX47619.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194684675|emb|CAR46619.1| 30S ribosomal protein S18 [Proteus mirabilis HI4320]
gi|194709785|gb|ACF89006.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195632565|gb|EDX51019.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197096584|emb|CAR62196.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197213462|gb|ACH50859.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197240072|gb|EDY22692.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937206|gb|ACH74539.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604951|gb|EDZ03496.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323851|gb|EDZ09046.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205274929|emb|CAR39998.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205347928|gb|EDZ34559.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206568686|gb|ACI10462.1| ribosomal protein S18 [Klebsiella pneumoniae 342]
gi|206711341|emb|CAR35719.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|208728812|gb|EDZ78413.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4206]
gi|208735551|gb|EDZ84238.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4045]
gi|208739127|gb|EDZ86809.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4042]
gi|209161927|gb|ACI39360.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4115]
gi|209749988|gb|ACI73301.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749990|gb|ACI73302.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749992|gb|ACI73303.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749994|gb|ACI73304.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749996|gb|ACI73305.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209914951|dbj|BAG80025.1| 30S ribosomal protein S18 [Escherichia coli SE11]
gi|211638421|emb|CAR67043.1| 30s ribosomal subunit protein s18 [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|212687373|gb|EEB46901.1| hypothetical protein PROVALCAL_01015 [Providencia alcalifaciens
DSM 30120]
gi|215267618|emb|CAS12073.1| 30S ribosomal subunit protein S18 [Escherichia coli O127:H6 str.
E2348/69]
gi|217322723|gb|EEC31147.1| ribosomal protein S18 [Escherichia coli O157:H7 str. TW14588]
gi|218354685|emb|CAV01702.1| 30S ribosomal subunit protein S18 [Escherichia coli 55989]
gi|218359014|emb|CAQ91674.1| 30S ribosomal subunit protein S18 [Escherichia fergusonii ATCC
35469]
gi|218363523|emb|CAR01177.1| 30S ribosomal subunit protein S18 [Escherichia coli IAI1]
gi|218368130|emb|CAR05937.1| 30S ribosomal subunit protein S18 [Escherichia coli S88]
gi|218372884|emb|CAR20764.1| 30S ribosomal subunit protein S18 [Escherichia coli IAI39]
gi|218430149|emb|CAR11007.1| 30S ribosomal subunit protein S18 [Escherichia coli ED1a]
gi|218434910|emb|CAR15848.1| 30S ribosomal subunit protein S18 [Escherichia coli UMN026]
gi|222035972|emb|CAP78717.1| 30S ribosomal protein S18 [Escherichia coli LF82]
gi|224470760|gb|ACN48590.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224962813|emb|CAX54271.1| 30S ribosomal protein S18 [Erwinia pyrifoliae Ep1/96]
gi|225204853|gb|EEG87207.1| hypothetical protein PROPEN_00482 [Proteus penneri ATCC 35198]
gi|226840328|gb|EEH72330.1| ribosomal protein S18 [Escherichia sp. 1_1_43]
gi|226901782|gb|EEH88041.1| 30S ribosomal subunit protein S18 [Escherichia sp. 3_2_53FAA]
gi|226908860|gb|EEH94778.1| 30S ribosomal protein S18 [Citrobacter sp. 30_2]
gi|227162650|gb|EEI47617.1| 30S ribosomal protein S18 [Proteus mirabilis ATCC 29906]
gi|227836327|gb|EEJ46793.1| 30S ribosomal protein S18 [Escherichia coli 83972]
gi|238544998|dbj|BAH61349.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238705881|gb|EEP98270.1| 30S ribosomal protein S18 [Yersinia ruckeri ATCC 29473]
gi|238859792|gb|ACR61790.1| 30S ribosomal subunit protein S18 [Escherichia coli BW2952]
gi|238867953|gb|ACR67664.1| ribosomal protein S18, putative [Edwardsiella ictaluri 93-146]
gi|242130305|gb|ACS84607.1| ribosomal protein S18 [Dickeya dadantii Ech703]
gi|242379723|emb|CAQ34548.1| 30S ribosomal subunit protein S18, subunit of 30S ribosomal
subunit and ribosome [Escherichia coli BL21(DE3)]
gi|247537034|gb|ACT05655.1| ribosomal protein S18 [Dickeya zeae Ech1591]
gi|253326217|gb|ACT30819.1| ribosomal protein S18 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253782993|emb|CAQ86158.1| 30s ribosomal subunit protein s18 [Photorhabdus asymbiotica]
gi|253976032|gb|ACT41703.1| 30S ribosomal protein S18 [Escherichia coli B str. REL606]
gi|253980188|gb|ACT45858.1| 30S ribosomal protein S18 [Escherichia coli BL21(DE3)]
gi|254595621|gb|ACT74982.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
TW14359]
gi|257757003|dbj|BAI28505.1| 30S ribosomal subunit protein S18 [Escherichia coli O26:H11 str.
11368]
gi|257762178|dbj|BAI33675.1| 30S ribosomal subunit protein S18 [Escherichia coli O103:H2 str.
12009]
gi|257767246|dbj|BAI38741.1| 30S ribosomal subunit protein S18 [Escherichia coli O111:H- str.
11128]
gi|259037288|gb|EEW38535.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|260218637|emb|CBA33945.1| 30S ribosomal protein S18 [Cronobacter turicensis z3032]
gi|260450971|gb|ACX41393.1| ribosomal protein S18 [Escherichia coli DH1]
gi|261249483|emb|CBG27348.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267983385|gb|ACY83214.1| 30S ribosomal protein S18 [Edwardsiella tarda EIB202]
gi|267996727|gb|ACY91612.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|270345444|gb|ACZ78209.1| ribosomal protein S18 [Dickeya dadantii Ech586]
gi|281181298|dbj|BAI57628.1| 30S ribosomal protein S18 [Escherichia coli SE15]
gi|281603664|gb|ADA76648.1| 30S ribosomal protein S18 [Shigella flexneri 2002017]
gi|282566898|gb|EFB72433.1| ribosomal protein S18 [Providencia rustigianii DSM 4541]
gi|282950330|emb|CBG89977.1| 30S ribosomal subunit protein S18 [Citrobacter rodentium ICC168]
gi|283477000|emb|CAY72892.1| 30S ribosomal protein S18 [Erwinia pyrifoliae DSM 12163]
gi|284006637|emb|CBA71898.1| 30S ribosomal protein S18 [Arsenophonus nasoniae]
gi|284924382|emb|CBG37504.1| 30S ribosomal subunit protein S18 [Escherichia coli 042]
gi|288892212|gb|ADC60530.1| ribosomal protein S18 [Klebsiella variicola At-22]
gi|289775236|gb|EFD83237.1| 30S ribosomal protein S18 [Klebsiella sp. 1_1_55]
gi|290765487|gb|ADD59448.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. CB9615]
gi|291069070|gb|EFE07179.1| ribosomal protein S18 [Citrobacter youngae ATCC 29220]
gi|291091986|gb|EFE24547.1| ribosomal protein S18 [Edwardsiella tarda ATCC 23685]
gi|291154105|gb|ADD78689.1| RpsR [Pantoea ananatis LMG 20103]
gi|291198021|emb|CBJ45124.1| 30s ribosomal subunit protein S18 [Erwinia amylovora ATCC 49946]
gi|291311659|gb|EFE52112.1| ribosomal protein S18 [Providencia rettgeri DSM 1131]
gi|291320963|gb|EFE60405.1| 30S ribosomal protein S18 [Escherichia coli B088]
gi|291424343|gb|EFE97557.1| 50S ribosomal protein L21 [Serratia odorifera DSM 4582]
gi|291429742|gb|EFF02756.1| 30S ribosomal protein S18 [Escherichia coli FVEC1412]
gi|291430423|gb|EFF03421.1| 30S ribosomal protein S18 [Escherichia coli B185]
gi|291472178|gb|EFF14660.1| 30S ribosomal protein S18 [Escherichia coli B354]
gi|291555043|emb|CBA23114.1| 30S ribosomal protein S18 [Erwinia amylovora CFBP1430]
gi|294492280|gb|ADE91036.1| ribosomal protein S18 [Escherichia coli IHE3034]
gi|295055424|gb|ADF60162.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295098349|emb|CBK87439.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|298280690|gb|EFI22191.1| 30S ribosomal protein S18 [Escherichia coli FVEC1302]
gi|299878935|gb|EFI87146.1| ribosomal protein S18 [Escherichia coli MS 196-1]
gi|300302008|gb|EFJ58393.1| ribosomal protein S18 [Escherichia coli MS 185-1]
gi|300305897|gb|EFJ60417.1| ribosomal protein S18 [Escherichia coli MS 200-1]
gi|300317842|gb|EFJ67626.1| ribosomal protein S18 [Escherichia coli MS 175-1]
gi|300356712|gb|EFJ72582.1| ribosomal protein S18 [Escherichia coli MS 198-1]
gi|300396522|gb|EFJ80060.1| ribosomal protein S18 [Escherichia coli MS 69-1]
gi|300402199|gb|EFJ85737.1| ribosomal protein S18 [Escherichia coli MS 84-1]
gi|300407710|gb|EFJ91248.1| ribosomal protein S18 [Escherichia coli MS 45-1]
gi|300414468|gb|EFJ97778.1| ribosomal protein S18 [Escherichia coli MS 115-1]
gi|300421209|gb|EFK04520.1| ribosomal protein S18 [Escherichia coli MS 182-1]
gi|300451417|gb|EFK15037.1| ribosomal protein S18 [Escherichia coli MS 116-1]
gi|300454577|gb|EFK18070.1| ribosomal protein S18 [Escherichia coli MS 21-1]
gi|300463969|gb|EFK27462.1| ribosomal protein S18 [Escherichia coli MS 187-1]
gi|300526185|gb|EFK47254.1| ribosomal protein S18 [Escherichia coli MS 119-7]
gi|300530726|gb|EFK51788.1| ribosomal protein S18 [Escherichia coli MS 107-1]
gi|300842144|gb|EFK69904.1| ribosomal protein S18 [Escherichia coli MS 124-1]
gi|300847320|gb|EFK75080.1| ribosomal protein S18 [Escherichia coli MS 78-1]
gi|301075197|gb|EFK90003.1| ribosomal protein S18 [Escherichia coli MS 146-1]
gi|301160880|emb|CBW20412.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|304557782|gb|ADM40446.1| SSU ribosomal protein S18p [Edwardsiella tarda FL6-60]
gi|305851245|gb|EFM51700.1| 30S ribosomal protein S18 [Escherichia coli NC101]
gi|306529941|gb|ADM99871.1| 30S ribosomal subunit protein S18 [Dickeya dadantii 3937]
gi|306905652|gb|EFN36181.1| ribosomal protein S18 [Escherichia coli W]
gi|307556369|gb|ADN49144.1| 30S ribosomal protein S18 [Escherichia coli ABU 83972]
gi|307629274|gb|ADN73578.1| 30S ribosomal protein S18 [Escherichia coli UM146]
gi|308119427|gb|EFO56689.1| ribosomal protein S18 [Escherichia coli MS 145-7]
gi|308924481|gb|EFP69977.1| ribosomal protein S18 [Shigella dysenteriae 1617]
gi|309704706|emb|CBJ04057.1| 30S ribosomal subunit protein S18 [Escherichia coli ETEC H10407]
gi|310331524|gb|EFP98780.1| ribosomal protein S18 [Escherichia coli 1827-70]
gi|310765318|gb|ADP10268.1| 30S ribosomal protein S18 [Erwinia sp. Ejp617]
gi|312173783|emb|CBX82037.1| 30S ribosomal protein S18 [Erwinia amylovora ATCC BAA-2158]
gi|312289118|gb|EFR17012.1| ribosomal protein S18 [Escherichia coli 2362-75]
gi|312915490|dbj|BAJ39464.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|312948852|gb|ADR29679.1| 30S ribosomal subunit protein S18 [Escherichia coli O83:H1 str.
NRG 857C]
gi|313646322|gb|EFS10784.1| ribosomal protein S18 [Shigella flexneri 2a str. 2457T]
gi|315063516|gb|ADT77843.1| 30S ribosomal subunit protein S18 [Escherichia coli W]
gi|315138756|dbj|BAJ45915.1| ribosomal protein S18 [Escherichia coli DH1]
gi|315255547|gb|EFU35515.1| ribosomal protein S18 [Escherichia coli MS 85-1]
gi|315288483|gb|EFU47881.1| ribosomal protein S18 [Escherichia coli MS 110-3]
gi|315293516|gb|EFU52868.1| ribosomal protein S18 [Escherichia coli MS 153-1]
gi|315299082|gb|EFU58336.1| ribosomal protein S18 [Escherichia coli MS 16-3]
gi|315617610|gb|EFU98216.1| ribosomal protein S18 [Escherichia coli 3431]
gi|316918528|gb|EFV39866.1| ribosomal protein S18 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316951357|gb|ADU70832.1| ribosomal protein S18 [Pantoea sp. At-9b]
gi|320030278|gb|EFW12293.1| 30S ribosomal subunit protein S18 [Serratia symbiotica str.
Tucson]
gi|320088819|emb|CBY98577.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|320176373|gb|EFW51428.1| SSU ribosomal protein S18p [Shigella dysenteriae CDC 74-1112]
gi|320177567|gb|EFW52557.1| SSU ribosomal protein S18p [Shigella boydii ATCC 9905]
gi|320187349|gb|EFW62043.1| SSU ribosomal protein S18p [Shigella flexneri CDC 796-83]
gi|320190669|gb|EFW65319.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. EC1212]
gi|320193685|gb|EFW68320.1| SSU ribosomal protein S18p [Escherichia coli WV_060327]
gi|320200670|gb|EFW75256.1| SSU ribosomal protein S18p [Escherichia coli EC4100B]
gi|320638960|gb|EFX08606.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. G5101]
gi|320644329|gb|EFX13394.1| 30S ribosomal protein S18 [Escherichia coli O157:H- str. 493-89]
gi|320649647|gb|EFX18171.1| 30S ribosomal protein S18 [Escherichia coli O157:H- str. H 2687]
gi|320655043|gb|EFX23004.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660550|gb|EFX28011.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. USDA
5905]
gi|320665819|gb|EFX32856.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. LSU-61]
gi|321222643|gb|EFX47715.1| SSU ribosomal protein S18p [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615555|gb|EFY12475.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618615|gb|EFY15504.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322621972|gb|EFY18822.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627696|gb|EFY24487.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631003|gb|EFY27767.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637778|gb|EFY34479.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642340|gb|EFY38945.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322643989|gb|EFY40537.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650936|gb|EFY47321.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653579|gb|EFY49907.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659764|gb|EFY56007.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662025|gb|EFY58241.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666226|gb|EFY62404.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672646|gb|EFY68757.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676076|gb|EFY72147.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680560|gb|EFY76598.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684546|gb|EFY80550.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322717339|gb|EFZ08910.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132730|gb|ADX20160.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323155981|gb|EFZ42143.1| ribosomal protein S18 [Escherichia coli EPECa14]
gi|323161993|gb|EFZ47865.1| ribosomal protein S18 [Escherichia coli E128010]
gi|323166685|gb|EFZ52443.1| ribosomal protein S18 [Shigella sonnei 53G]
gi|323171640|gb|EFZ57286.1| ribosomal protein S18 [Escherichia coli LT-68]
gi|323176040|gb|EFZ61632.1| ribosomal protein S18 [Escherichia coli 1180]
gi|323182307|gb|EFZ67717.1| ribosomal protein S18 [Escherichia coli 1357]
gi|323189920|gb|EFZ75198.1| ribosomal protein S18 [Escherichia coli RN587/1]
gi|323192861|gb|EFZ78087.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197263|gb|EFZ82403.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201620|gb|EFZ86684.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206134|gb|EFZ91096.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213142|gb|EFZ97944.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215516|gb|EGA00260.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219501|gb|EGA03986.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227804|gb|EGA11958.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228974|gb|EGA13103.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236414|gb|EGA20490.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238681|gb|EGA22733.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241868|gb|EGA25897.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247983|gb|EGA31920.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254686|gb|EGA38497.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258255|gb|EGA41932.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263599|gb|EGA47120.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265805|gb|EGA49301.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270249|gb|EGA53697.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|323380405|gb|ADX52673.1| ribosomal protein S18 [Escherichia coli KO11]
gi|323935327|gb|EGB31675.1| ribosomal protein S18 [Escherichia coli E1520]
gi|323940121|gb|EGB36315.1| ribosomal protein S18 [Escherichia coli E482]
gi|323946051|gb|EGB42088.1| ribosomal protein S18 [Escherichia coli H120]
gi|323950729|gb|EGB46607.1| ribosomal protein S18 [Escherichia coli H252]
gi|323955489|gb|EGB51253.1| ribosomal protein S18 [Escherichia coli H263]
gi|323960246|gb|EGB55887.1| ribosomal protein S18 [Escherichia coli H489]
gi|323965589|gb|EGB61043.1| ribosomal protein S18 [Escherichia coli M863]
gi|323970543|gb|EGB65802.1| ribosomal protein S18 [Escherichia coli TA007]
gi|323975456|gb|EGB70557.1| ribosomal protein S18 [Escherichia coli TW10509]
gi|324005266|gb|EGB74485.1| ribosomal protein S18 [Escherichia coli MS 57-2]
gi|324013801|gb|EGB83020.1| ribosomal protein S18 [Escherichia coli MS 60-1]
gi|324019380|gb|EGB88599.1| ribosomal protein S18 [Escherichia coli MS 117-3]
gi|324112201|gb|EGC06179.1| ribosomal protein S18 [Escherichia fergusonii B253]
gi|324118768|gb|EGC12660.1| ribosomal protein S18 [Escherichia coli E1167]
gi|325499736|gb|EGC97595.1| 30S ribosomal protein S18 [Escherichia fergusonii ECD227]
gi|326345469|gb|EGD69212.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. 1125]
gi|326346674|gb|EGD70408.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. 1044]
gi|326626080|gb|EGE32425.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630306|gb|EGE36649.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|327250142|gb|EGE61861.1| ribosomal protein S18 [Escherichia coli STEC_7v]
gi|327395407|dbj|BAK12829.1| 30S ribosomal protein S18 RpsR [Pantoea ananatis AJ13355]
gi|328536975|gb|EGF63268.1| ribosomal protein S18 [Klebsiella sp. MS 92-3]
gi|330908543|gb|EGH37062.1| SSU ribosomal protein S18p [Escherichia coli AA86]
gi|331035929|gb|EGI08167.1| ribosomal protein S18 [Escherichia coli H736]
gi|331040721|gb|EGI12879.1| ribosomal protein S18 [Escherichia coli M605]
gi|331046384|gb|EGI18474.1| ribosomal protein S18 [Escherichia coli M718]
gi|331051819|gb|EGI23858.1| ribosomal protein S18 [Escherichia coli TA206]
gi|331056917|gb|EGI28911.1| ribosomal protein S18 [Escherichia coli TA143]
gi|331061700|gb|EGI33626.1| ribosomal protein S18 [Escherichia coli TA271]
gi|331071198|gb|EGI42555.1| ribosomal protein S18 [Escherichia coli TA280]
gi|331071795|gb|EGI43131.1| ribosomal protein S18 [Escherichia coli H591]
gi|331081441|gb|EGI52602.1| ribosomal protein S18 [Escherichia coli H299]
gi|332083203|gb|EGI88434.1| ribosomal protein S18 [Shigella boydii 5216-82]
gi|332083716|gb|EGI88934.1| ribosomal protein S18 [Shigella dysenteriae 155-74]
gi|332087075|gb|EGI92209.1| ribosomal protein S18 [Shigella boydii 3594-74]
gi|332103339|gb|EGJ06685.1| ribosomal protein S18 [Shigella sp. D9]
gi|332346283|gb|AEE59617.1| ribosomal protein S18 RpsR [Escherichia coli UMNK88]
gi|332749078|gb|EGJ79501.1| ribosomal protein S18 [Shigella flexneri K-671]
gi|332749345|gb|EGJ79766.1| ribosomal protein S18 [Shigella flexneri 4343-70]
gi|332761898|gb|EGJ92172.1| ribosomal protein S18 [Shigella flexneri 2747-71]
gi|332763253|gb|EGJ93496.1| ribosomal protein S18 [Shigella flexneri 2930-71]
gi|332991204|gb|AEF10187.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|333007702|gb|EGK27179.1| ribosomal protein S18 [Shigella flexneri VA-6]
gi|333009033|gb|EGK28489.1| ribosomal protein S18 [Shigella flexneri K-218]
gi|333011183|gb|EGK30597.1| ribosomal protein S18 [Shigella flexneri K-272]
gi|333012623|gb|EGK32003.1| ribosomal protein S18 [Shigella flexneri K-227]
gi|333022347|gb|EGK41585.1| ribosomal protein S18 [Shigella flexneri K-304]
Length = 75
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|319789282|ref|YP_004150915.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
gi|317113784|gb|ADU96274.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
Length = 80
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R RRK C + RIDYK++ LL F+S+RG+I+P RIS V K QR+LA+A
Sbjct: 5 LPQRRFVRRRKYCKFCAEKIERIDYKNVELLKSFISERGRIIPRRISGVCSKHQRQLARA 64
Query: 69 IKRARYLGLIAYVNL 83
+KRAR+L L+ +V +
Sbjct: 65 VKRARHLALLPFVKM 79
>gi|57239413|ref|YP_180549.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579385|ref|YP_197597.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58617440|ref|YP_196639.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str. Gardel]
gi|75507479|sp|Q5FG28|RS18_EHRRG RecName: Full=30S ribosomal protein S18
gi|81672777|sp|Q5HAJ5|RS18_EHRRW RecName: Full=30S ribosomal protein S18
gi|57161492|emb|CAH58418.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417052|emb|CAI28165.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str. Gardel]
gi|58418011|emb|CAI27215.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
Length = 95
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +KQR
Sbjct: 19 SPLAYLKRPYFRRSKACPLEQCANEDIDYKNKALLSKFTSEYGRILPSRITSVSSRKQRL 78
Query: 65 LAKAIKRARYLGLIAYV 81
L+ AIKRARYL L+ Y
Sbjct: 79 LSTAIKRARYLALLPYC 95
>gi|304413760|ref|ZP_07395204.1| 30S ribosomal subunit protein S18 [Candidatus Regiella
insecticola LSR1]
gi|304283851|gb|EFL92245.1| 30S ribosomal subunit protein S18 [Candidatus Regiella
insecticola LSR1]
Length = 75
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGTLEIDYKDIVTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|116667427|pdb|2GY9|R Chain R, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667479|pdb|2GYB|R Chain R, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
Length = 69
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 1 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 60
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 61 LLPYTD 66
>gi|33357895|pdb|1P6G|R Chain R, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357972|pdb|1P87|R Chain R, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754056|pdb|2AVY|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of One 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes And
Is Described In Remark 400.
gi|83754112|pdb|2AW7|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
The Entire Crystal Structure Contains Two 70s Ribosomes
And Is Described In Remark 400.
gi|118138070|pdb|2I2P|R Chain R, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|118138141|pdb|2I2U|R Chain R, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|157836038|pdb|2QOU|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836085|pdb|2QOW|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836142|pdb|2QOY|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836189|pdb|2QP0|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429715|pdb|2QAL|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429767|pdb|2QAN|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429825|pdb|2QB9|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429877|pdb|2QBB|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429929|pdb|2QBD|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429981|pdb|2QBF|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430035|pdb|2QBH|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430088|pdb|2QBJ|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431388|pdb|2Z4K|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431441|pdb|2Z4M|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With
Paromomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|168988805|pdb|2VHO|R Chain R, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988826|pdb|2VHP|R Chain R, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107295|pdb|3DF1|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The First 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|197107347|pdb|3DF3|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|329666009|pdb|3J00|R Chain R, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 74
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 6 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 65
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 66 LLPYTD 71
>gi|21231018|ref|NP_636935.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|58582038|ref|YP_201054.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|66768977|ref|YP_243739.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|84623950|ref|YP_451322.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166711573|ref|ZP_02242780.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|188576349|ref|YP_001913278.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188992091|ref|YP_001904101.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. B100]
gi|289663137|ref|ZP_06484718.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669573|ref|ZP_06490648.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. musacearum
NCPPB4381]
gi|325915473|ref|ZP_08177787.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325917961|ref|ZP_08180130.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325922527|ref|ZP_08184288.1| SSU ribosomal protein S18P [Xanthomonas gardneri ATCC 19865]
gi|23822129|sp|Q8PAC1|RS18_XANCP RecName: Full=30S ribosomal protein S18
gi|75508188|sp|Q5H052|RS18_XANOR RecName: Full=30S ribosomal protein S18
gi|81305059|sp|Q4UTA4|RS18_XANC8 RecName: Full=30S ribosomal protein S18
gi|123739106|sp|Q2P329|RS18_XANOM RecName: Full=30S ribosomal protein S18
gi|229560081|sp|B0RUY8|RS18_XANCB RecName: Full=30S ribosomal protein S18
gi|229560082|sp|B2SIV1|RS18_XANOP RecName: Full=30S ribosomal protein S18
gi|21112642|gb|AAM40859.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|58426632|gb|AAW75669.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|66574309|gb|AAY49719.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|84367890|dbj|BAE69048.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|167733851|emb|CAP52057.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris]
gi|188520801|gb|ACD58746.1| ribosomal protein S18 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325535818|gb|EGD07645.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325538355|gb|EGD10037.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325546992|gb|EGD18085.1| SSU ribosomal protein S18P [Xanthomonas gardneri ATCC 19865]
Length = 76
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KR+R+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRSRFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|330720458|gb|EGG98765.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC2047]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G +IDYKD+ L F+++ GKIVPSRI+ + QR+LA AIKRARYL
Sbjct: 7 RRKYCRFTAEGVDQIDYKDLDTLKGFVTETGKIVPSRITGTKARYQRQLATAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|290473411|ref|YP_003466277.1| 30S ribosomal subunit protein S18 [Xenorhabdus bovienii SS-2004]
gi|289172710|emb|CBJ79481.1| 30S ribosomal subunit protein S18 [Xenorhabdus bovienii SS-2004]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|117618475|ref|YP_855253.1| 30S ribosomal protein S18 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330831137|ref|YP_004394089.1| 30S ribosomal protein S18 [Aeromonas veronii B565]
gi|166220920|sp|A0KG68|RS18_AERHH RecName: Full=30S ribosomal protein S18
gi|117559882|gb|ABK36830.1| ribosomal protein S18 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|328806273|gb|AEB51472.1| 30S ribosomal protein S18 [Aeromonas veronii B565]
Length = 76
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVTEIDYKDIVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|15617154|ref|NP_240367.1| 30S ribosomal protein S18 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681905|ref|YP_002468291.1| 30S ribosomal protein S18 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682460|ref|YP_002468844.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471611|ref|ZP_05635610.1| 30S ribosomal protein S18 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387089|sp|P57626|RS18_BUCAI RecName: Full=30S ribosomal protein S18
gi|254765415|sp|B8D8C7|RS18_BUCA5 RecName: Full=30S ribosomal protein S18
gi|254765416|sp|B8D884|RS18_BUCAT RecName: Full=30S ribosomal protein S18
gi|25294830|pir||E84995 30S ribosomal protein S18 [imported] - Buchnera sp. (strain APS)
gi|10039219|dbj|BAB13253.1| 30S ribosomal protein S18 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622193|gb|ACL30349.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624748|gb|ACL30903.1| 30S ribosomal protein S18 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086283|gb|ADP66365.1| 30S ribosomal protein S18 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086859|gb|ADP66940.1| 30S ribosomal protein S18 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087447|gb|ADP67527.1| 30S ribosomal protein S18 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087935|gb|ADP68014.1| 30S ribosomal protein S18 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIAVLKNYITESGKIVPSRITGTRAKYQRQLSRAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|254481140|ref|ZP_05094386.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2148]
gi|214038935|gb|EEB79596.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2148]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA A+KRAR+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLETLKAYVSETGKIVPSRITGTKAKYQRQLATAVKRARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|54778771|gb|AAV39605.1| ribosomal protein S18 [synthetic construct]
Length = 102
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 31 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 90
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 91 LLPYTD 96
>gi|50122532|ref|YP_051699.1| 30S ribosomal protein S18 [Pectobacterium atrosepticum SCRI1043]
gi|227112366|ref|ZP_03826022.1| 30S ribosomal protein S18 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253689795|ref|YP_003018985.1| ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|261822827|ref|YP_003260933.1| 30S ribosomal protein S18 [Pectobacterium wasabiae WPP163]
gi|59798691|sp|Q6D137|RS18_ERWCT RecName: Full=30S ribosomal protein S18
gi|259494815|sp|C6DE13|RS18_PECCP RecName: Full=30S ribosomal protein S18
gi|49613058|emb|CAG76509.1| 30S ribosomal protein S18 [Pectobacterium atrosepticum SCRI1043]
gi|251756373|gb|ACT14449.1| ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|261606840|gb|ACX89326.1| ribosomal protein S18 [Pectobacterium wasabiae WPP163]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|270160072|ref|ZP_06188728.1| ribosomal protein S18 [Legionella longbeachae D-4968]
gi|289165147|ref|YP_003455285.1| 30S ribosomal subunit protein S18 [Legionella longbeachae NSW150]
gi|269988411|gb|EEZ94666.1| ribosomal protein S18 [Legionella longbeachae D-4968]
gi|288858320|emb|CBJ12188.1| 30S ribosomal subunit protein S18 [Legionella longbeachae NSW150]
Length = 75
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C S +G IDYKDI LL ++S+ GKIVPSRI+ + QR+LA+AI +AR+LG
Sbjct: 7 RKKMCRFSAEGGNEIDYKDINLLKNYISETGKIVPSRITGTHTRFQRQLARAIMQARFLG 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|73667308|ref|YP_303324.1| 30S ribosomal protein S18 [Ehrlichia canis str. Jake]
gi|123773361|sp|Q3YRC9|RS18_EHRCJ RecName: Full=30S ribosomal protein S18
gi|72394449|gb|AAZ68726.1| SSU ribosomal protein S18P [Ehrlichia canis str. Jake]
Length = 95
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +KQR
Sbjct: 19 SPLAYLKRPYFKRSKACPLEQCPNEDIDYKNKTLLSKFTSEYGRILPSRITSVSSRKQRL 78
Query: 65 LAKAIKRARYLGLIAYV 81
L+ A+KRARYL L+ Y
Sbjct: 79 LSTAVKRARYLALLPYC 95
>gi|256821795|ref|YP_003145758.1| 30S ribosomal protein S18 [Kangiella koreensis DSM 16069]
gi|256795334|gb|ACV25990.1| ribosomal protein S18 [Kangiella koreensis DSM 16069]
Length = 75
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C S +G IDYKD L ++++ GKIVPSRI+ S K QR+LA A+KRAR+L
Sbjct: 7 RRKFCRFSAEGVVEIDYKDTATLKNYITETGKIVPSRITGTSAKYQRQLASAVKRARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|145297777|ref|YP_001140618.1| 30S ribosomal protein S18 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166220921|sp|A4SIZ8|RS18_AERS4 RecName: Full=30S ribosomal protein S18
gi|142850549|gb|ABO88870.1| ribosomal protein S18 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 76
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVTEIDYKDIVTLKNYVTESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|238897794|ref|YP_002923473.1| 30S ribosomal subunit protein S18 [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|259494812|sp|C4K432|RS18_HAMD5 RecName: Full=30S ribosomal protein S18
gi|229465551|gb|ACQ67325.1| 30S ribosomal subunit protein S18 [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 85
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G +IDYKDI +L ++++ GKIVPSRI+ K QR+LA+AIK ARYL
Sbjct: 7 RRKFCRFTAEGVKQIDYKDIIMLKNYITESGKIVPSRITGTCSKYQRQLAQAIKVARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|220934100|ref|YP_002512999.1| ribosomal protein S18 [Thioalkalivibrio sp. HL-EbGR7]
gi|254812963|sp|B8GNS3|RS18_THISH RecName: Full=30S ribosomal protein S18
gi|219995410|gb|ACL72012.1| ribosomal protein S18 [Thioalkalivibrio sp. HL-EbGR7]
Length = 74
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ S + QR+LA A+KRARYL
Sbjct: 7 RRKYCRFTAEGVEFIDYKDLNTLKNYITETGKIVPSRITGTSARYQRQLATAVKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|85058325|ref|YP_454027.1| 30S ribosomal protein S18 [Sodalis glossinidius str. 'morsitans']
gi|123766478|sp|Q2NW53|RS18_SODGM RecName: Full=30S ribosomal protein S18
gi|256032361|pdb|3E1A|K Chain K, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032418|pdb|3E1C|K Chain K, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|84778845|dbj|BAE73622.1| 30S ribosomal protein S18 [Sodalis glossinidius str. 'morsitans']
Length = 75
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTTEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|226226611|ref|YP_002760717.1| 30S ribosomal protein S18 [Gemmatimonas aurantiaca T-27]
gi|226089802|dbj|BAH38247.1| 30S ribosomal protein S18 [Gemmatimonas aurantiaca T-27]
Length = 73
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K CP++ G +DYKD RLL RF++ GKI+PSR+S V + QR+L+KA+K+ARYL L
Sbjct: 5 KKPCPITEAGIRYVDYKDDRLLARFITDYGKILPSRLSGVDARHQRQLSKAVKKARYLAL 64
Query: 78 IAYVN 82
+ YV
Sbjct: 65 LPYVK 69
>gi|319787275|ref|YP_004146750.1| ribosomal protein S18 [Pseudoxanthomonas suwonensis 11-1]
gi|317465787|gb|ADV27519.1| ribosomal protein S18 [Pseudoxanthomonas suwonensis 11-1]
Length = 76
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ + QR+L+ AIKRAR+L
Sbjct: 7 RRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSRYQRQLSTAIKRARFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|15839149|ref|NP_299837.1| 30S ribosomal protein S18 [Xylella fastidiosa 9a5c]
gi|11387104|sp|Q9PAF8|RS18_XYLFA RecName: Full=30S ribosomal protein S18
gi|9107772|gb|AAF85357.1|AE004063_6 30S ribosomal protein S18 [Xylella fastidiosa 9a5c]
Length = 76
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+L A+KRAR+L
Sbjct: 7 RRKFCKFTAEGIKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLTTAVKRARFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|15804791|ref|NP_290832.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 EDL933]
gi|12519193|gb|AAG59398.1|AE005652_15 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
EDL933]
Length = 75
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDY+DI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYEDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|91775681|ref|YP_545437.1| 30S ribosomal protein S18 [Methylobacillus flagellatus KT]
gi|123078871|sp|Q1H1P1|RS18_METFK RecName: Full=30S ribosomal protein S18
gi|91709668|gb|ABE49596.1| SSU ribosomal protein S18P [Methylobacillus flagellatus KT]
Length = 75
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G ++DYKD+ LL F+++ GKI+P+RI+ K QR+L A+
Sbjct: 1 MARDMFKRRRYCRFSAEGIKQVDYKDVDLLKDFINENGKIIPARITGTKAKYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|167948932|ref|ZP_02536006.1| 30S ribosomal protein S18 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 74
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +G IDYKD+ LL ++S+ GKIVPSRI+ K QR+LA AIKRARYL
Sbjct: 7 RKKYCRFTAEGITDIDYKDLNLLKAYVSESGKIVPSRITGTKAKYQRQLATAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|198284526|ref|YP_002220847.1| 30S ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666634|ref|YP_002427193.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249047|gb|ACH84640.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518847|gb|ACK79433.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 92
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N + RRK C +G IDYKD++ L ++ + GKIVPSRI+ S+ QR+L AIKRA
Sbjct: 22 NFTRRRKFCRFRAEGVKEIDYKDLKTLQAYVGETGKIVPSRITGTSNLYQRQLTTAIKRA 81
Query: 73 RYLGLIAYV 81
R+L L+ YV
Sbjct: 82 RFLALLPYV 90
>gi|116515284|ref|YP_802913.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285320|sp|Q056X9|RS18_BUCCC RecName: Full=30S ribosomal protein S18
gi|116257138|gb|ABJ90820.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 75
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G +IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIK AR+LG
Sbjct: 7 RRKFCRFTAEGIKKIDYKDIMILKNYITENGKIVPSRITGTKAKYQRQLSRAIKIARFLG 66
Query: 77 LIAYVN 82
I Y +
Sbjct: 67 FIPYTD 72
>gi|288554587|ref|YP_003426522.1| 30S ribosomal protein S18 [Bacillus pseudofirmus OF4]
gi|288545747|gb|ADC49630.1| 30S ribosomal protein S18 [Bacillus pseudofirmus OF4]
Length = 77
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD LL RF+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCFFTVNKITKIDYKDTDLLKRFISERGKILPRRVTGTSAKYQRQLTTA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YVN
Sbjct: 61 IKRARQIALLPYVN 74
>gi|94677019|ref|YP_589000.1| ribosomal protein S18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|122988100|sp|Q1LSR4|RS18_BAUCH RecName: Full=30S ribosomal protein S18
gi|94220169|gb|ABF14328.1| ribosomal protein S18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 75
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAEDVIEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 66
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 67 LLPYTDL 73
>gi|240948272|ref|ZP_04752658.1| 30S ribosomal protein S18 [Actinobacillus minor NM305]
gi|257465547|ref|ZP_05629918.1| 30S ribosomal protein S18 [Actinobacillus minor 202]
gi|240297311|gb|EER47852.1| 30S ribosomal protein S18 [Actinobacillus minor NM305]
gi|257451207|gb|EEV25250.1| 30S ribosomal protein S18 [Actinobacillus minor 202]
Length = 75
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDIATLKNYISENGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|21672804|ref|NP_660871.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009169|sp|Q8K919|RS18_BUCAP RecName: Full=30S ribosomal protein S18
gi|21623454|gb|AAM68082.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 75
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIK+ARYL
Sbjct: 7 RRKFCRFTAEGIQEIDYKDIAMLKNYITENGKIVPSRITGTRAKFQRQLSRAIKKARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|307822879|ref|ZP_07653110.1| ribosomal protein S18 [Methylobacter tundripaludum SV96]
gi|307736483|gb|EFO07329.1| ribosomal protein S18 [Methylobacter tundripaludum SV96]
Length = 75
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ RN+ R+K C S +G +IDYKD+ LL+ ++++ GKIVPSRI+ S K QR+L AI
Sbjct: 1 MARNI-RRKKFCRFSAEGGTQIDYKDLDLLSDYITETGKIVPSRITGTSAKYQRQLGVAI 59
Query: 70 KRARYLGLIAYVN 82
KRAR++ L+ + +
Sbjct: 60 KRARFIALLPFCD 72
>gi|68171814|ref|ZP_00545152.1| Ribosomal protein S18 [Ehrlichia chaffeensis str. Sapulpa]
gi|88657819|ref|YP_507130.1| 30S ribosomal protein S18 [Ehrlichia chaffeensis str. Arkansas]
gi|123722798|sp|Q2GHF3|RS18_EHRCR RecName: Full=30S ribosomal protein S18
gi|67998763|gb|EAM85477.1| Ribosomal protein S18 [Ehrlichia chaffeensis str. Sapulpa]
gi|88599276|gb|ABD44745.1| putative ribosomal protein S18 [Ehrlichia chaffeensis str.
Arkansas]
Length = 95
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +KQR
Sbjct: 19 SPLAYLKRPYFKRSKACPLEQCPNEDIDYKNKGLLSKFTSEYGRILPSRITSVSSRKQRL 78
Query: 65 LAKAIKRARYLGLIAYV 81
L+ A+KRARYL L+ Y
Sbjct: 79 LSTAVKRARYLALLPYC 95
>gi|258546023|ref|ZP_05706257.1| 50S ribosomal protein L21 [Cardiobacterium hominis ATCC 15826]
gi|258518752|gb|EEV87611.1| 50S ribosomal protein L21 [Cardiobacterium hominis ATCC 15826]
Length = 70
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+SC + +G IDYKD+ L FL++ GKIVP+RI+ + QR+LA AIKRAR+L
Sbjct: 3 RRRSCRFTAEGVKEIDYKDLETLKAFLTETGKIVPARITGTNAFYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYSD 68
>gi|16272489|ref|NP_438703.1| 30S ribosomal protein S18 [Haemophilus influenzae Rd KW20]
gi|32033888|ref|ZP_00134159.1| COG0238: Ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|33152179|ref|NP_873532.1| 30S ribosomal protein S18 [Haemophilus ducreyi 35000HP]
gi|68249142|ref|YP_248254.1| 30S ribosomal protein S18 [Haemophilus influenzae 86-028NP]
gi|145628926|ref|ZP_01784726.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.1-21]
gi|145630274|ref|ZP_01786055.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|145633503|ref|ZP_01789232.1| 30S ribosomal protein S18 [Haemophilus influenzae 3655]
gi|145635374|ref|ZP_01791076.1| 30S ribosomal protein S18 [Haemophilus influenzae PittAA]
gi|145637414|ref|ZP_01793073.1| 30S ribosomal protein S18 [Haemophilus influenzae PittHH]
gi|145638545|ref|ZP_01794154.1| 30S ribosomal protein S18 [Haemophilus influenzae PittII]
gi|145640518|ref|ZP_01796102.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|148825181|ref|YP_001289934.1| 30S ribosomal protein S18 [Haemophilus influenzae PittEE]
gi|148827736|ref|YP_001292489.1| 30S ribosomal protein S18 [Haemophilus influenzae PittGG]
gi|165976597|ref|YP_001652190.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|167855349|ref|ZP_02478116.1| 30S ribosomal protein S18 [Haemophilus parasuis 29755]
gi|190150497|ref|YP_001969022.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|219871260|ref|YP_002475635.1| 30S ribosomal protein S18 [Haemophilus parasuis SH0165]
gi|229844296|ref|ZP_04464436.1| 30S ribosomal protein S18 [Haemophilus influenzae 6P18H1]
gi|229846628|ref|ZP_04466736.1| 30S ribosomal protein S18 [Haemophilus influenzae 7P49H1]
gi|254361769|ref|ZP_04977904.1| ribosomal protein S18 [Mannheimia haemolytica PHL213]
gi|260580992|ref|ZP_05848815.1| ribosomal protein S18 [Haemophilus influenzae RdAW]
gi|260582751|ref|ZP_05850538.1| ribosomal protein S18 [Haemophilus influenzae NT127]
gi|261494029|ref|ZP_05990532.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496211|ref|ZP_05992617.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|303250080|ref|ZP_07336282.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303253253|ref|ZP_07339402.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246085|ref|ZP_07528167.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250425|ref|ZP_07532372.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252810|ref|ZP_07534700.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307257225|ref|ZP_07538996.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307259503|ref|ZP_07541228.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|319775534|ref|YP_004138022.1| 30S ribosomal protein S18 [Haemophilus influenzae F3047]
gi|319897938|ref|YP_004136135.1| 30S ribosomal protein s18 [Haemophilus influenzae F3031]
gi|322515404|ref|ZP_08068396.1| 50S ribosomal protein L21 [Actinobacillus ureae ATCC 25976]
gi|329122423|ref|ZP_08251010.1| 50S ribosomal protein L21 [Haemophilus aegyptius ATCC 11116]
gi|54039411|sp|P66458|RS18_HAEDU RecName: Full=30S ribosomal protein S18
gi|54042146|sp|P66457|RS18_HAEIN RecName: Full=30S ribosomal protein S18
gi|81336451|sp|Q4QN03|RS18_HAEI8 RecName: Full=30S ribosomal protein S18
gi|166220952|sp|A5U9V0|RS18_HAEIE RecName: Full=30S ribosomal protein S18
gi|166220953|sp|A5UH50|RS18_HAEIG RecName: Full=30S ribosomal protein S18
gi|229470504|sp|B3GY57|RS18_ACTP7 RecName: Full=30S ribosomal protein S18
gi|229470509|sp|B0BQB1|RS18_ACTPJ RecName: Full=30S ribosomal protein S18
gi|254812943|sp|B8F5T5|RS18_HAEPS RecName: Full=30S ribosomal protein S18
gi|1573530|gb|AAC22203.1| ribosomal protein S18 (rpS18) [Haemophilus influenzae Rd KW20]
gi|33148401|gb|AAP95921.1| 30S ribosomal protein S18 [Haemophilus ducreyi 35000HP]
gi|68057341|gb|AAX87594.1| 30S ribosomal protein S18 [Haemophilus influenzae 86-028NP]
gi|144979396|gb|EDJ89082.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.1-21]
gi|144984009|gb|EDJ91446.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|144985872|gb|EDJ92480.1| 30S ribosomal protein S18 [Haemophilus influenzae 3655]
gi|145267380|gb|EDK07382.1| 30S ribosomal protein S18 [Haemophilus influenzae PittAA]
gi|145269360|gb|EDK09304.1| 30S ribosomal protein S18 [Haemophilus influenzae PittHH]
gi|145272140|gb|EDK12048.1| 30S ribosomal protein S18 [Haemophilus influenzae PittII]
gi|145275104|gb|EDK14966.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.4-21]
gi|148715341|gb|ABQ97551.1| 30S ribosomal protein S18 [Haemophilus influenzae PittEE]
gi|148718978|gb|ABR00106.1| 30S ribosomal protein S18 [Haemophilus influenzae PittGG]
gi|153093304|gb|EDN74300.1| ribosomal protein S18 [Mannheimia haemolytica PHL213]
gi|165876698|gb|ABY69746.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|167853497|gb|EDS24744.1| 30S ribosomal protein S18 [Haemophilus parasuis 29755]
gi|189915628|gb|ACE61880.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|219691464|gb|ACL32687.1| 30S ribosomal protein S18 [Haemophilus parasuis SH0165]
gi|229810721|gb|EEP46439.1| 30S ribosomal protein S18 [Haemophilus influenzae 7P49H1]
gi|229812545|gb|EEP48234.1| 30S ribosomal protein S18 [Haemophilus influenzae 6P18H1]
gi|260092351|gb|EEW76291.1| ribosomal protein S18 [Haemophilus influenzae RdAW]
gi|260094201|gb|EEW78102.1| ribosomal protein S18 [Haemophilus influenzae NT127]
gi|261308163|gb|EEY09460.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310195|gb|EEY11395.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|301169260|emb|CBW28857.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae 10810]
gi|302647935|gb|EFL78142.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651143|gb|EFL81297.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853020|gb|EFM85243.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857554|gb|EFM89663.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859709|gb|EFM91732.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306864267|gb|EFM96179.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306866439|gb|EFM98302.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|309750049|gb|ADO80033.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae R2866]
gi|309972304|gb|ADO95505.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae R2846]
gi|317433444|emb|CBY81827.1| 30S ribosomal protein S18 [Haemophilus influenzae F3031]
gi|317450125|emb|CBY86339.1| 30S ribosomal protein S18 [Haemophilus influenzae F3047]
gi|322118559|gb|EFX90791.1| 50S ribosomal protein L21 [Actinobacillus ureae ATCC 25976]
gi|327473705|gb|EGF19124.1| 50S ribosomal protein L21 [Haemophilus aegyptius ATCC 11116]
Length = 75
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|56965862|ref|YP_177596.1| 30S ribosomal protein S18 [Bacillus clausii KSM-K16]
gi|59798604|sp|Q5WAH5|RS18_BACSK RecName: Full=30S ribosomal protein S18
gi|56912108|dbj|BAD66636.1| 30S ribosomal protein S18 [Bacillus clausii KSM-K16]
Length = 77
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + IDYKD+ LL RF+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCFFTANKITHIDYKDVDLLKRFISERGKILPRRVTGTSAKYQRKLTVA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YVN
Sbjct: 61 IKRARQVALLPYVN 74
>gi|152977671|ref|YP_001377188.1| 30S ribosomal protein S18 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189029666|sp|A7GVN5|RS18_BACCN RecName: Full=30S ribosomal protein S18
gi|152026423|gb|ABS24193.1| ribosomal protein S18 [Bacillus cytotoxicus NVH 391-98]
Length = 77
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 9 AKRRKVCFFTANGITHIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQ 68
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 69 MALLPYVG 76
>gi|197294287|ref|YP_001798828.1| 30S ribosomal protein S18 [Candidatus Phytoplasma australiense]
gi|171853614|emb|CAM11485.1| 30S ribosomal protein S18 [Candidatus Phytoplasma australiense]
Length = 78
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 10 LRRNVSH----RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+++N H RRK C + +ID+KDI LL +F+++RGKI+ RI++ S K QR+L
Sbjct: 1 MKKNKRHVFKKRRKVCYFTENKFSKIDFKDIELLKKFITERGKIISRRITNTSAKWQRQL 60
Query: 66 AKAIKRARYLGLIAYVN 82
A AIKRAR++ LI+++
Sbjct: 61 AVAIKRARHMALISFIQ 77
>gi|262279563|ref|ZP_06057348.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus RUH2202]
gi|262259914|gb|EEY78647.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus RUH2202]
Length = 75
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAENVVYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLS 66
Query: 77 LIAYVN 82
LIAY +
Sbjct: 67 LIAYTD 72
>gi|88810600|ref|ZP_01125857.1| 30S ribosomal protein S18 [Nitrococcus mobilis Nb-231]
gi|88792230|gb|EAR23340.1| 30S ribosomal protein S18 [Nitrococcus mobilis Nb-231]
Length = 74
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA AIKRARYL
Sbjct: 7 RRKYCRFTAEGVREIDYKDLNTLKSYVTETGKIVPSRITGTRAKYQRQLASAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|118594784|ref|ZP_01552131.1| 30S ribosomal protein S18 [Methylophilales bacterium HTCC2181]
gi|118440562|gb|EAV47189.1| 30S ribosomal protein S18 [Methylophilales bacterium HTCC2181]
Length = 75
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RR+ C S +G +DYKDI LL F+++ GK++P+RI+ K QR+L A+
Sbjct: 1 MAREMYKRRRYCRFSAEGIKEVDYKDIDLLKDFITENGKLIPARITGTKSKYQRQLGTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|22124560|ref|NP_667983.1| 30S ribosomal protein S18 [Yersinia pestis KIM 10]
gi|45440398|ref|NP_991937.1| 30S ribosomal protein S18 [Yersinia pestis biovar Microtus str.
91001]
gi|51594792|ref|YP_068983.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 32953]
gi|108806085|ref|YP_650001.1| 30S ribosomal protein S18 [Yersinia pestis Antiqua]
gi|108813441|ref|YP_649208.1| 30S ribosomal protein S18 [Yersinia pestis Nepal516]
gi|123440775|ref|YP_001004767.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145600833|ref|YP_001164909.1| 30S ribosomal protein S18 [Yersinia pestis Pestoides F]
gi|153949310|ref|YP_001402591.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 31758]
gi|153997314|ref|ZP_02022414.1| 30S ribosomal protein S18 [Yersinia pestis CA88-4125]
gi|157368695|ref|YP_001476684.1| 30S ribosomal protein S18 [Serratia proteamaculans 568]
gi|162420420|ref|YP_001605262.1| 30S ribosomal protein S18 [Yersinia pestis Angola]
gi|165928152|ref|ZP_02223984.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937415|ref|ZP_02225978.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011310|ref|ZP_02232208.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213997|ref|ZP_02240032.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401213|ref|ZP_02306713.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420501|ref|ZP_02312254.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423736|ref|ZP_02315489.1| ribosomal protein S18 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170025997|ref|YP_001722502.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis YPIII]
gi|186893801|ref|YP_001870913.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis PB1/+]
gi|218930551|ref|YP_002348426.1| 30S ribosomal protein S18 [Yersinia pestis CO92]
gi|229836651|ref|ZP_04456817.1| 30S ribosomal subunit protein S18 [Yersinia pestis Pestoides A]
gi|229839191|ref|ZP_04459350.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899755|ref|ZP_04514896.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903917|ref|ZP_04519030.1| 30S ribosomal subunit protein S18 [Yersinia pestis Nepal516]
gi|238750086|ref|ZP_04611589.1| 30S ribosomal protein S18 [Yersinia rohdei ATCC 43380]
gi|238787555|ref|ZP_04631353.1| 30S ribosomal protein S18 [Yersinia frederiksenii ATCC 33641]
gi|238792979|ref|ZP_04636608.1| 30S ribosomal protein S18 [Yersinia intermedia ATCC 29909]
gi|261342859|ref|ZP_05970717.1| ribosomal protein S18 [Enterobacter cancerogenus ATCC 35316]
gi|270265016|ref|ZP_06193279.1| 30S ribosomal protein S18 [Serratia odorifera 4Rx13]
gi|270489093|ref|ZP_06206167.1| ribosomal protein S18 [Yersinia pestis KIM D27]
gi|304396940|ref|ZP_07378820.1| ribosomal protein S18 [Pantoea sp. aB]
gi|308188253|ref|YP_003932384.1| 30S ribosomal protein S18 [Pantoea vagans C9-1]
gi|311281252|ref|YP_003943483.1| ribosomal protein S18 [Enterobacter cloacae SCF1]
gi|322831171|ref|YP_004211198.1| ribosomal protein S18 [Rahnella sp. Y9602]
gi|332160037|ref|YP_004296614.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|20978696|sp|Q8ZB83|RS18_YERPE RecName: Full=30S ribosomal protein S18
gi|59798666|sp|Q66FA0|RS18_YERPS RecName: Full=30S ribosomal protein S18
gi|122979828|sp|Q1CBW6|RS18_YERPA RecName: Full=30S ribosomal protein S18
gi|123246216|sp|Q1CEH2|RS18_YERPN RecName: Full=30S ribosomal protein S18
gi|166222257|sp|A1JIT0|RS18_YERE8 RecName: Full=30S ribosomal protein S18
gi|166222258|sp|A4TRM4|RS18_YERPP RecName: Full=30S ribosomal protein S18
gi|167011194|sp|A8G8W6|RS18_SERP5 RecName: Full=30S ribosomal protein S18
gi|167011195|sp|A7FMW3|RS18_YERP3 RecName: Full=30S ribosomal protein S18
gi|229560085|sp|B2K2L5|RS18_YERPB RecName: Full=30S ribosomal protein S18
gi|229560086|sp|A9QYL4|RS18_YERPG RecName: Full=30S ribosomal protein S18
gi|229560087|sp|B1JMM2|RS18_YERPY RecName: Full=30S ribosomal protein S18
gi|21957360|gb|AAM84234.1|AE013667_7 30S ribosomal subunit protein S18 [Yersinia pestis KIM 10]
gi|45435255|gb|AAS60814.1| 30S ribosomal protein S18 [Yersinia pestis biovar Microtus str.
91001]
gi|51588074|emb|CAH19680.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 32953]
gi|108777089|gb|ABG19608.1| SSU ribosomal protein S18P [Yersinia pestis Nepal516]
gi|108777998|gb|ABG12056.1| SSU ribosomal protein S18P [Yersinia pestis Antiqua]
gi|115349162|emb|CAL22125.1| 30S ribosomal protein S18 [Yersinia pestis CO92]
gi|122087736|emb|CAL10521.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145212529|gb|ABP41936.1| 30S ribosomal protein S18 [Yersinia pestis Pestoides F]
gi|149288951|gb|EDM39031.1| 30S ribosomal protein S18 [Yersinia pestis CA88-4125]
gi|152960805|gb|ABS48266.1| ribosomal protein S18 [Yersinia pseudotuberculosis IP 31758]
gi|157320459|gb|ABV39556.1| ribosomal protein S18 [Serratia proteamaculans 568]
gi|162353235|gb|ABX87183.1| ribosomal protein S18 [Yersinia pestis Angola]
gi|165914520|gb|EDR33134.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
IP275]
gi|165919839|gb|EDR37140.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989694|gb|EDR41995.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204792|gb|EDR49272.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961307|gb|EDR57328.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049238|gb|EDR60646.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057906|gb|EDR67652.1| ribosomal protein S18 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752531|gb|ACA70049.1| ribosomal protein S18 [Yersinia pseudotuberculosis YPIII]
gi|186696827|gb|ACC87456.1| ribosomal protein S18 [Yersinia pseudotuberculosis PB1/+]
gi|229679687|gb|EEO75790.1| 30S ribosomal subunit protein S18 [Yersinia pestis Nepal516]
gi|229687247|gb|EEO79322.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695557|gb|EEO85604.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706335|gb|EEO92343.1| 30S ribosomal subunit protein S18 [Yersinia pestis Pestoides A]
gi|238711630|gb|EEQ03845.1| 30S ribosomal protein S18 [Yersinia rohdei ATCC 43380]
gi|238724342|gb|EEQ15984.1| 30S ribosomal protein S18 [Yersinia frederiksenii ATCC 33641]
gi|238727579|gb|EEQ19104.1| 30S ribosomal protein S18 [Yersinia intermedia ATCC 29909]
gi|270040950|gb|EFA14051.1| 30S ribosomal protein S18 [Serratia odorifera 4Rx13]
gi|270337597|gb|EFA48374.1| ribosomal protein S18 [Yersinia pestis KIM D27]
gi|288314902|gb|EFC53840.1| ribosomal protein S18 [Enterobacter cancerogenus ATCC 35316]
gi|304355736|gb|EFM20103.1| ribosomal protein S18 [Pantoea sp. aB]
gi|308058763|gb|ADO10935.1| 30S ribosomal protein S18 [Pantoea vagans C9-1]
gi|308750447|gb|ADO50199.1| ribosomal protein S18 [Enterobacter cloacae SCF1]
gi|318607403|emb|CBY28901.1| SSU ribosomal protein S18p [Yersinia enterocolitica subsp.
palearctica Y11]
gi|320013741|gb|ADV97312.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|321166372|gb|ADW72071.1| ribosomal protein S18 [Rahnella sp. Y9602]
gi|325664267|gb|ADZ40911.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862079|emb|CBX72245.1| 30S ribosomal protein S18 [Yersinia enterocolitica W22703]
Length = 75
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRARYL
Sbjct: 7 RRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARCIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|292493500|ref|YP_003528939.1| ribosomal protein S18 [Nitrosococcus halophilus Nc4]
gi|291582095|gb|ADE16552.1| ribosomal protein S18 [Nitrosococcus halophilus Nc4]
Length = 74
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+L++A+KRARYL
Sbjct: 7 RRKFCRFTAEGVKEIDYKDLATLKEYITETGKIVPSRITGTKAKYQRQLSRAVKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|218514153|ref|ZP_03510993.1| 30S ribosomal protein S18 [Rhizobium etli 8C-3]
Length = 55
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISS 56
M+E + P+ RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++
Sbjct: 1 MSEASSAPV-RRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITA 55
>gi|52424526|ref|YP_087663.1| 30S ribosomal protein S18 [Mannheimia succiniciproducens MBEL55E]
gi|113461579|ref|YP_719648.1| 30S ribosomal protein S18 [Haemophilus somnus 129PT]
gi|152978437|ref|YP_001344066.1| 30S ribosomal protein S18 [Actinobacillus succinogenes 130Z]
gi|170718759|ref|YP_001783944.1| 30S ribosomal protein S18 [Haemophilus somnus 2336]
gi|332289560|ref|YP_004420412.1| 30S ribosomal protein S18 [Gallibacterium anatis UMN179]
gi|59798655|sp|Q65VD2|RS18_MANSM RecName: Full=30S ribosomal protein S18
gi|123132188|sp|Q0I4E7|RS18_HAES1 RecName: Full=30S ribosomal protein S18
gi|171704224|sp|A6VMD4|RS18_ACTSZ RecName: Full=30S ribosomal protein S18
gi|189029679|sp|B0US45|RS18_HAES2 RecName: Full=30S ribosomal protein S18
gi|52306578|gb|AAU37078.1| RpsR protein [Mannheimia succiniciproducens MBEL55E]
gi|112823622|gb|ABI25711.1| SSU ribosomal protein S18P [Haemophilus somnus 129PT]
gi|150840160|gb|ABR74131.1| ribosomal protein S18 [Actinobacillus succinogenes 130Z]
gi|168826888|gb|ACA32259.1| ribosomal protein S18 [Haemophilus somnus 2336]
gi|330432456|gb|AEC17515.1| 30S ribosomal protein S18 [Gallibacterium anatis UMN179]
Length = 75
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|238757533|ref|ZP_04618718.1| 30S ribosomal protein S18 [Yersinia aldovae ATCC 35236]
gi|238764708|ref|ZP_04625652.1| 30S ribosomal protein S18 [Yersinia kristensenii ATCC 33638]
gi|300715053|ref|YP_003739856.1| 30S ribosomal protein S18 [Erwinia billingiae Eb661]
gi|238697104|gb|EEP89877.1| 30S ribosomal protein S18 [Yersinia kristensenii ATCC 33638]
gi|238704295|gb|EEP96827.1| 30S ribosomal protein S18 [Yersinia aldovae ATCC 35236]
gi|299060889|emb|CAX57996.1| 30S ribosomal protein S18 [Erwinia billingiae Eb661]
Length = 75
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRARYL
Sbjct: 7 RRKFCRFTAEGVVEIDYKDIATLKNYVTESGKIVPSRITGTRAKYQRQLARCIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|325295181|ref|YP_004281695.1| 30S ribosomal protein S18 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065629|gb|ADY73636.1| 30S ribosomal protein S18 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 80
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R RRK C + +IDYK++ LL F+S+RG+I+P RIS V K QR+LA+A
Sbjct: 5 LPQRRFVRRRKYCKFCAEKIEKIDYKNVELLKPFISERGRIIPRRISGVCSKHQRQLARA 64
Query: 69 IKRARYLGLIAYVNL 83
+KRAR+L L+ +V +
Sbjct: 65 VKRARHLALLPFVKI 79
>gi|300721500|ref|YP_003710775.1| 30S ribosomal subunit protein S18 [Xenorhabdus nematophila ATCC
19061]
gi|297627992|emb|CBJ88541.1| 30S ribosomal subunit protein S18 [Xenorhabdus nematophila ATCC
19061]
Length = 75
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRAR+L
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARHLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|238783557|ref|ZP_04627579.1| 30S ribosomal protein S18 [Yersinia bercovieri ATCC 43970]
gi|238715612|gb|EEQ07602.1| 30S ribosomal protein S18 [Yersinia bercovieri ATCC 43970]
Length = 75
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRARYL
Sbjct: 7 RRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKFQRQLARCIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|78485707|ref|YP_391632.1| ribosomal protein S18 [Thiomicrospira crunogena XCL-2]
gi|123741575|sp|Q31FW5|RS18_THICR RecName: Full=30S ribosomal protein S18
gi|78363993|gb|ABB41958.1| SSU ribosomal protein S18P [Thiomicrospira crunogena XCL-2]
Length = 75
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +G IDYKD+ L ++++ GKIVPSRI+ S K QR+L+ AIKRARYL
Sbjct: 7 RKKFCRFTVEGVKEIDYKDLDTLKSYITETGKIVPSRITGTSAKYQRQLSTAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|56708146|ref|YP_170042.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670617|ref|YP_667174.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis FSC198]
gi|118497542|ref|YP_898592.1| 30S ribosomal protein S18 [Francisella tularensis subsp. novicida
U112]
gi|134301959|ref|YP_001121928.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931624|ref|YP_001891608.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457242|ref|ZP_03665715.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370630|ref|ZP_04986635.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254372903|ref|ZP_04988392.1| 30S ribosomal protein S18 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374357|ref|ZP_04989839.1| hypothetical protein FTDG_00524 [Francisella novicida GA99-3548]
gi|254874949|ref|ZP_05247659.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|81677050|sp|Q5NG00|RS18_FRATT RecName: Full=30S ribosomal protein S18
gi|122970929|sp|Q14HF2|RS18_FRAT1 RecName: Full=30S ribosomal protein S18
gi|205558096|sp|A0Q6H3|RS18_FRATN RecName: Full=30S ribosomal protein S18
gi|205558144|sp|A4IY06|RS18_FRATW RecName: Full=30S ribosomal protein S18
gi|56604638|emb|CAG45694.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320950|emb|CAL09077.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis FSC198]
gi|118423448|gb|ABK89838.1| 30S ribosomal protein S18 [Francisella novicida U112]
gi|134049736|gb|ABO46807.1| ribosomal protein S18 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568873|gb|EDN34527.1| hypothetical protein FTBG_00419 [Francisella tularensis subsp.
tularensis FSC033]
gi|151570630|gb|EDN36284.1| 30S ribosomal protein S18 [Francisella novicida GA99-3549]
gi|151572077|gb|EDN37731.1| hypothetical protein FTDG_00524 [Francisella novicida GA99-3548]
gi|187712533|gb|ACD30830.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840948|gb|EET19384.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159352|gb|ADA78743.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis NE061598]
gi|332184104|gb|AEE26358.1| SSU ribosomal protein S18p [Francisella cf. novicida 3523]
gi|332678241|gb|AEE87370.1| SSU ribosomal protein S18p [Francisella cf. novicida Fx1]
Length = 72
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|251793280|ref|YP_003008008.1| 30S ribosomal protein S18 [Aggregatibacter aphrophilus NJ8700]
gi|261867098|ref|YP_003255020.1| 30S ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293390733|ref|ZP_06635067.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|315633585|ref|ZP_07888875.1| 50S ribosomal protein L21 [Aggregatibacter segnis ATCC 33393]
gi|247534675|gb|ACS97921.1| ribosomal protein S18 [Aggregatibacter aphrophilus NJ8700]
gi|261412430|gb|ACX81801.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951267|gb|EFE01386.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|315477627|gb|EFU68369.1| 50S ribosomal protein L21 [Aggregatibacter segnis ATCC 33393]
Length = 76
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|16767639|ref|NP_463254.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|20978699|sp|Q8ZK81|RS18_SALTY RecName: Full=30S ribosomal protein S18
gi|16422955|gb|AAL23213.1| 30S ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
Length = 75
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+L +AIKRARYL
Sbjct: 7 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLRRAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|269959107|ref|YP_003328896.1| 30S ribosomal protein S18 [Anaplasma centrale str. Israel]
gi|269848938|gb|ACZ49582.1| 30S ribosomal protein S18 [Anaplasma centrale str. Israel]
Length = 96
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A +P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS KK
Sbjct: 17 AAHSPLVYLKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSKK 76
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+ LA+A+KRAR+L L+ Y
Sbjct: 77 QKLLARAVKRARFLALLPYC 96
>gi|253999141|ref|YP_003051204.1| 30S ribosomal protein S18 [Methylovorus sp. SIP3-4]
gi|313201242|ref|YP_004039900.1| 30S ribosomal protein S18 [Methylovorus sp. MP688]
gi|253985820|gb|ACT50677.1| ribosomal protein S18 [Methylovorus sp. SIP3-4]
gi|312440558|gb|ADQ84664.1| ribosomal protein S18 [Methylovorus sp. MP688]
Length = 75
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R++ RR+ C S +G +DYKD+ LL F+++ GKI+P+RI+ + QR+L A+KR
Sbjct: 3 RDMFKRRRYCRFSAEGIKEVDYKDVDLLKDFINENGKIIPARITGTKARYQRQLTTAVKR 62
Query: 72 ARYLGLIAYVN 82
AR+L L+ Y +
Sbjct: 63 ARFLALLPYTD 73
>gi|325579200|ref|ZP_08149156.1| 50S ribosomal protein L21 [Haemophilus parainfluenzae ATCC 33392]
gi|301155579|emb|CBW15047.1| 30S ribosomal subunit protein S18 [Haemophilus parainfluenzae
T3T1]
gi|325159435|gb|EGC71569.1| 50S ribosomal protein L21 [Haemophilus parainfluenzae ATCC 33392]
Length = 76
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|15603043|ref|NP_246115.1| 30S ribosomal protein S18 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|260912756|ref|ZP_05919242.1| 50S ribosomal protein L21 [Pasteurella dagmatis ATCC 43325]
gi|13431845|sp|P57916|RS18_PASMU RecName: Full=30S ribosomal protein S18
gi|12721529|gb|AAK03262.1| RpS18 [Pasteurella multocida subsp. multocida str. Pm70]
gi|260633134|gb|EEX51299.1| 50S ribosomal protein L21 [Pasteurella dagmatis ATCC 43325]
Length = 75
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTAENVVEIDYKDVATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|242243301|ref|ZP_04797746.1| 30S ribosomal protein S18 [Staphylococcus epidermidis W23144]
gi|251811311|ref|ZP_04825784.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
BCM-HMP0060]
gi|293367634|ref|ZP_06614286.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|242233250|gb|EES35562.1| 30S ribosomal protein S18 [Staphylococcus epidermidis W23144]
gi|251805178|gb|EES57835.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
BCM-HMP0060]
gi|291318204|gb|EFE58598.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 88
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 21 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 80
Query: 78 IAYV 81
+ YV
Sbjct: 81 LPYV 84
>gi|254369338|ref|ZP_04985350.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122288|gb|EDO66428.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC022]
Length = 72
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYYD 68
>gi|82703070|ref|YP_412636.1| 30S ribosomal protein S18 [Nitrosospira multiformis ATCC 25196]
gi|123768178|sp|Q2Y7M7|RS18_NITMU RecName: Full=30S ribosomal protein S18
gi|82411135|gb|ABB75244.1| SSU ribosomal protein S18P [Nitrosospira multiformis ATCC 25196]
Length = 94
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + +G +DYKDI LL F+++ GKI+P+RI+ + QR+L+ A++R
Sbjct: 22 RPLFKRRKFCRFTAEGIKTVDYKDIELLKDFINENGKIIPARITGTKSRYQRQLSTAVER 81
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 82 ARFLALLPYTDL 93
>gi|15618861|ref|NP_225147.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae CWL029]
gi|15836485|ref|NP_301009.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae J138]
gi|16752078|ref|NP_445444.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae AR39]
gi|33242320|ref|NP_877261.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae TW-183]
gi|6707742|sp|Q9Z6V4|RS18_CHLPN RecName: Full=30S ribosomal protein S18
gi|4377277|gb|AAD19090.1| S18 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189819|gb|AAF38692.1| ribosomal protein S18 [Chlamydophila pneumoniae AR39]
gi|8979326|dbj|BAA99160.1| S18 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236831|gb|AAP98918.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae TW-183]
gi|269302744|gb|ACZ32844.1| ribosomal protein S18 [Chlamydophila pneumoniae LPCoLN]
Length = 82
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 13 NVSHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
N HRRK CP G IDYKD+ L +F+++RGK++P RI+ VS + Q L++A
Sbjct: 7 NNEHRRKRFNKKCPFVSAGWKTIDYKDVETLKKFITERGKVLPRRITGVSSRFQGVLSQA 66
Query: 69 IKRARYLGLIAYV 81
IKRAR+LGL+ +V
Sbjct: 67 IKRARHLGLLPFV 79
>gi|289551779|ref|YP_003472683.1| SSU ribosomal protein S18p [Staphylococcus lugdunensis HKU09-01]
gi|315660049|ref|ZP_07912907.1| 30S ribosomal protein S18 [Staphylococcus lugdunensis M23590]
gi|289181310|gb|ADC88555.1| SSU ribosomal protein S18p [Staphylococcus lugdunensis HKU09-01]
gi|315494950|gb|EFU83287.1| 30S ribosomal protein S18 [Staphylococcus lugdunensis M23590]
Length = 80
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|239828694|ref|YP_002951318.1| 30S ribosomal protein S18 [Geobacillus sp. WCH70]
gi|295402141|ref|ZP_06812100.1| ribosomal protein S18 [Geobacillus thermoglucosidasius C56-YS93]
gi|312112738|ref|YP_003991054.1| ribosomal protein S18 [Geobacillus sp. Y4.1MC1]
gi|259494811|sp|C5D9X4|RS18_GEOSW RecName: Full=30S ribosomal protein S18
gi|239808987|gb|ACS26052.1| ribosomal protein S18 [Geobacillus sp. WCH70]
gi|294975824|gb|EFG51443.1| ribosomal protein S18 [Geobacillus thermoglucosidasius C56-YS93]
gi|311217839|gb|ADP76443.1| ribosomal protein S18 [Geobacillus sp. Y4.1MC1]
Length = 78
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 9 AKRRKVCYFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQ 68
Query: 75 LGLIAYV 81
+ L+ YV
Sbjct: 69 MALLPYV 75
>gi|27469288|ref|NP_765925.1| 30S ribosomal protein S18 [Staphylococcus epidermidis ATCC 12228]
gi|57865985|ref|YP_187646.1| 30S ribosomal protein S18 [Staphylococcus epidermidis RP62A]
gi|223043454|ref|ZP_03613500.1| ribosomal protein S18 [Staphylococcus capitis SK14]
gi|242372656|ref|ZP_04818230.1| 30S ribosomal protein S18 [Staphylococcus epidermidis M23864:W1]
gi|282874664|ref|ZP_06283546.1| ribosomal protein S18 [Staphylococcus epidermidis SK135]
gi|314935023|ref|ZP_07842382.1| ribosomal protein S18 [Staphylococcus caprae C87]
gi|38258566|sp|Q8CQP6|RS18_STAES RecName: Full=30S ribosomal protein S18
gi|71153728|sp|Q5HRZ3|RS18_STAEQ RecName: Full=30S ribosomal protein S18
gi|27316838|gb|AAO06013.1|AE016752_46 30S ribosomal protein S18 [Staphylococcus epidermidis ATCC 12228]
gi|57636643|gb|AAW53431.1| ribosomal protein S18 [Staphylococcus epidermidis RP62A]
gi|222443243|gb|EEE49342.1| ribosomal protein S18 [Staphylococcus capitis SK14]
gi|242349573|gb|EES41174.1| 30S ribosomal protein S18 [Staphylococcus epidermidis M23864:W1]
gi|281296588|gb|EFA89100.1| ribosomal protein S18 [Staphylococcus epidermidis SK135]
gi|313652953|gb|EFS16716.1| ribosomal protein S18 [Staphylococcus caprae C87]
gi|319399801|gb|EFV88049.1| ribosomal protein S18 [Staphylococcus epidermidis FRI909]
gi|329723856|gb|EGG60383.1| ribosomal protein S18 [Staphylococcus epidermidis VCU144]
gi|329734384|gb|EGG70698.1| ribosomal protein S18 [Staphylococcus epidermidis VCU028]
gi|329736079|gb|EGG72352.1| ribosomal protein S18 [Staphylococcus epidermidis VCU045]
Length = 80
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|88606855|ref|YP_504776.1| 30S ribosomal protein S18 [Anaplasma phagocytophilum HZ]
gi|123736454|sp|Q2GLH5|RS18_ANAPZ RecName: Full=30S ribosomal protein S18
gi|88597918|gb|ABD43388.1| ribosomal protein S18 [Anaplasma phagocytophilum HZ]
Length = 96
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+ L
Sbjct: 21 PLVYLKRPYFRKSRSCPLAQCPDEDIDYKNKVLLSKFVSEYGRILPSRITSVSARKQKLL 80
Query: 66 AKAIKRARYLGLIAYV 81
A+AIKRARYL L+ Y
Sbjct: 81 ARAIKRARYLALLPYC 96
>gi|70727625|ref|YP_254541.1| 30S ribosomal protein S18 [Staphylococcus haemolyticus JCSC1435]
gi|228474191|ref|ZP_04058928.1| ribosomal protein S18 [Staphylococcus hominis SK119]
gi|314935171|ref|ZP_07842524.1| ribosomal protein S18 [Staphylococcus hominis subsp. hominis C80]
gi|123762271|sp|Q4L342|RS18_STAHJ RecName: Full=30S ribosomal protein S18
gi|68448351|dbj|BAE05935.1| 30S ribosomal protein S18 [Staphylococcus haemolyticus JCSC1435]
gi|228271886|gb|EEK13223.1| ribosomal protein S18 [Staphylococcus hominis SK119]
gi|313656506|gb|EFS20245.1| ribosomal protein S18 [Staphylococcus hominis subsp. hominis C80]
Length = 80
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|46447225|ref|YP_008590.1| ribosomal protein S18 [Candidatus Protochlamydia amoebophila
UWE25]
gi|59798733|sp|Q6MAT4|RS18_PARUW RecName: Full=30S ribosomal protein S18
gi|46400866|emb|CAF24315.1| probable ribosomal protein S18 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 86
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S +RK CP + G IDYKDI L +F+++RGKI+P RI+ VS Q++L AIKRAR+
Sbjct: 17 SKKRKRCPFTAAGIREIDYKDIDTLTKFITERGKILPRRITGVSAYHQKKLTAAIKRARH 76
Query: 75 LGLIAYV 81
+ L+ +V
Sbjct: 77 VALLPFV 83
>gi|192362397|ref|YP_001983436.1| 30S ribosomal protein S18 [Cellvibrio japonicus Ueda107]
gi|229559974|sp|B3PCS1|RS18_CELJU RecName: Full=30S ribosomal protein S18
gi|190688562|gb|ACE86240.1| ribosomal protein S18 [Cellvibrio japonicus Ueda107]
Length = 75
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G RIDYKDI L ++++ GKIVPSRI+ K QR+LA AIKRARYL LI Y +
Sbjct: 14 TAEGTKRIDYKDIETLKAYITETGKIVPSRITGTKAKYQRQLATAIKRARYLALIPYTD 72
>gi|222474849|ref|YP_002563264.1| small subunit ribosomal protein S18 (rpsR) [Anaplasma marginale
str. Florida]
gi|254994706|ref|ZP_05276896.1| 30S ribosomal protein S18 [Anaplasma marginale str. Mississippi]
gi|255002819|ref|ZP_05277783.1| 30S ribosomal protein S18 [Anaplasma marginale str. Puerto Rico]
gi|255003952|ref|ZP_05278753.1| 30S ribosomal protein S18 [Anaplasma marginale str. Virginia]
gi|222418985|gb|ACM49008.1| small subunit ribosomal protein S18 (rpsR) [Anaplasma marginale
str. Florida]
Length = 100
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+
Sbjct: 24 SPLVYLKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSRKQKL 83
Query: 65 LAKAIKRARYLGLIAYV 81
LA+A+KRAR+L L+ Y
Sbjct: 84 LARAVKRARFLALLPYC 100
>gi|238650507|ref|YP_002916359.1| 30S ribosomal protein S18 [Rickettsia peacockii str. Rustic]
gi|259494818|sp|C4K160|RS18_RICPU RecName: Full=30S ribosomal protein S18
gi|238624605|gb|ACR47311.1| 30S ribosomal protein S18 [Rickettsia peacockii str. Rustic]
Length = 95
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVSNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|167627911|ref|YP_001678411.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241668463|ref|ZP_04756041.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876997|ref|ZP_05249707.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|205557713|sp|B0U080|RS18_FRAP2 RecName: Full=30S ribosomal protein S18
gi|167597912|gb|ABZ87910.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254843018|gb|EET21432.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 72
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVDGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|91204936|ref|YP_537291.1| 30S ribosomal protein S18 [Rickettsia bellii RML369-C]
gi|157827736|ref|YP_001496800.1| 30S ribosomal protein S18 [Rickettsia bellii OSU 85-389]
gi|123084595|sp|Q1RKB2|RS18_RICBR RecName: Full=30S ribosomal protein S18
gi|166220983|sp|A8GY13|RS18_RICB8 RecName: Full=30S ribosomal protein S18
gi|91068480|gb|ABE04202.1| 30S ribosomal protein S18 [Rickettsia bellii RML369-C]
gi|157803040|gb|ABV79763.1| 30S ribosomal protein S18 [Rickettsia bellii OSU 85-389]
Length = 94
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 26 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 85
Query: 77 LIAYV 81
L+ +V
Sbjct: 86 LLPFV 90
>gi|115314809|ref|YP_763532.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica OSU18]
gi|122325175|sp|Q0BLY9|RS18_FRATO RecName: Full=30S ribosomal protein S18
gi|115129708|gb|ABI82895.1| ribosomal protein S18 [Francisella tularensis subsp. holarctica
OSU18]
Length = 72
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYINETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|15605536|ref|NP_220322.1| 30S ribosomal protein S18 [Chlamydia trachomatis D/UW-3/CX]
gi|76789545|ref|YP_328631.1| 30S ribosomal protein S18 [Chlamydia trachomatis A/HAR-13]
gi|166154144|ref|YP_001654262.1| 30S ribosomal protein S18 [Chlamydia trachomatis 434/Bu]
gi|166155019|ref|YP_001653274.1| 30S ribosomal protein S18 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803233|ref|YP_002888427.1| 30S ribosomal protein S18 [Chlamydia trachomatis B/Jali20/OT]
gi|237805154|ref|YP_002889308.1| 30S ribosomal protein S18 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311638|ref|ZP_05354208.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276]
gi|255317939|ref|ZP_05359185.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276s]
gi|255349202|ref|ZP_05381209.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70]
gi|255503739|ref|ZP_05382129.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70s]
gi|255507420|ref|ZP_05383059.1| 30S ribosomal protein S18 [Chlamydia trachomatis D(s)2923]
gi|301335384|ref|ZP_07223628.1| 30S ribosomal protein S18 [Chlamydia trachomatis L2tet1]
gi|6831541|sp|O84808|RS18_CHLTR RecName: Full=30S ribosomal protein S18
gi|123606576|sp|Q3KKN9|RS18_CHLTA RecName: Full=30S ribosomal protein S18
gi|229559975|sp|B0B929|RS18_CHLT2 RecName: Full=30S ribosomal protein S18
gi|229559976|sp|B0BAQ8|RS18_CHLTB RecName: Full=30S ribosomal protein S18
gi|3329268|gb|AAC68397.1| S18 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76168075|gb|AAX51083.1| SSU ribosomal protein S18P [Chlamydia trachomatis A/HAR-13]
gi|165930132|emb|CAP03616.1| SSU ribosomal protein S18 [Chlamydia trachomatis 434/Bu]
gi|165931007|emb|CAP06570.1| SSU ribosomal protein S18 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273454|emb|CAX10369.1| SSU ribosomal protein S18 [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274467|emb|CAX11262.1| SSU ribosomal protein S18 [Chlamydia trachomatis B/Jali20/OT]
gi|289525847|emb|CBJ15328.1| SSU ribosomal protein S18 [Chlamydia trachomatis Sweden2]
gi|296435429|gb|ADH17607.1| 30S ribosomal protein S18 [Chlamydia trachomatis E/150]
gi|296436353|gb|ADH18527.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/9768]
gi|296437284|gb|ADH19454.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/11222]
gi|296438212|gb|ADH20373.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/11074]
gi|296439146|gb|ADH21299.1| 30S ribosomal protein S18 [Chlamydia trachomatis E/11023]
gi|297140713|gb|ADH97471.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/9301]
gi|297748930|gb|ADI51476.1| SSU ribosomal protein S18P [Chlamydia trachomatis D-EC]
gi|297749810|gb|ADI52488.1| SSU ribosomal protein S18P [Chlamydia trachomatis D-LC]
Length = 81
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 15 SHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
HRRK CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 8 EHRRKRFAKKCPFVSAGWKTIDYKDVTTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLIAYVN 82
RAR++GL+ +V
Sbjct: 68 RARHVGLLPFVG 79
>gi|239637255|ref|ZP_04678243.1| ribosomal protein S18 [Staphylococcus warneri L37603]
gi|239597211|gb|EEQ79720.1| ribosomal protein S18 [Staphylococcus warneri L37603]
gi|330685075|gb|EGG96742.1| ribosomal protein S18 [Staphylococcus epidermidis VCU121]
Length = 80
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTAAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|157825190|ref|YP_001492910.1| 30S ribosomal protein S18 [Rickettsia akari str. Hartford]
gi|166220982|sp|A8GLX7|RS18_RICAH RecName: Full=30S ribosomal protein S18
gi|157799148|gb|ABV74402.1| 30S ribosomal protein S18 [Rickettsia akari str. Hartford]
Length = 95
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVHNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|15603919|ref|NP_220434.1| 30S ribosomal protein S18 [Rickettsia prowazekii str. Madrid E]
gi|6226086|sp|Q9ZEA5|RS18_RICPR RecName: Full=30S ribosomal protein S18
gi|3860610|emb|CAA14511.1| 30S RIBOSOMAL PROTEIN S18 (rpsR) [Rickettsia prowazekii]
gi|292571636|gb|ADE29551.1| 30S ribosomal protein S18 [Rickettsia prowazekii Rp22]
Length = 95
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|229586275|ref|YP_002844776.1| 30S ribosomal protein S18 [Rickettsia africae ESF-5]
gi|259494817|sp|C3PM73|RS18_RICAE RecName: Full=30S ribosomal protein S18
gi|228021325|gb|ACP53033.1| 30S ribosomal protein S18 [Rickettsia africae ESF-5]
Length = 95
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|27904981|ref|NP_778107.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29611842|sp|P59502|RS18_BUCBP RecName: Full=30S ribosomal protein S18
gi|27904379|gb|AAO27212.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 75
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKD+ +L ++++ GKIVPSRI+ S + QR+LA+AIKRARYL
Sbjct: 7 RRKFCRFTVEKIKEIDYKDLSMLKNYITESGKIVPSRITGTSARYQRQLARAIKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|157803227|ref|YP_001491776.1| 30S ribosomal protein S18 [Rickettsia canadensis str. McKiel]
gi|166220984|sp|A8EXA8|RS18_RICCK RecName: Full=30S ribosomal protein S18
gi|157784490|gb|ABV72991.1| 30S ribosomal protein S18 [Rickettsia canadensis str. McKiel]
Length = 95
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|51473301|ref|YP_067058.1| 30S ribosomal protein S18 [Rickettsia typhi str. Wilmington]
gi|59798674|sp|Q68XR6|RS18_RICTY RecName: Full=30S ribosomal protein S18
gi|51459613|gb|AAU03576.1| 30S ribosomal protein S18 [Rickettsia typhi str. Wilmington]
Length = 95
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|15891988|ref|NP_359702.1| 30S ribosomal protein S18 [Rickettsia conorii str. Malish 7]
gi|34580977|ref|ZP_00142457.1| 30S ribosomal protein S18 [Rickettsia sibirica 246]
gi|157827936|ref|YP_001494178.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932624|ref|YP_001649413.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. Iowa]
gi|20140122|sp|Q92JK2|RS18_RICCN RecName: Full=30S ribosomal protein S18
gi|166220985|sp|A8GQJ5|RS18_RICRS RecName: Full=30S ribosomal protein S18
gi|189029685|sp|B0BVY1|RS18_RICRO RecName: Full=30S ribosomal protein S18
gi|15619102|gb|AAL02603.1| 30S ribosomal protein S18 [Rickettsia conorii str. Malish 7]
gi|28262362|gb|EAA25866.1| 30S ribosomal protein S18 [Rickettsia sibirica 246]
gi|157800417|gb|ABV75670.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907711|gb|ABY72007.1| SSU ribosomal protein S18P [Rickettsia rickettsii str. Iowa]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|224475522|ref|YP_002633128.1| 30S ribosomal protein S18 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254812955|sp|B9DIC0|RS18_STACT RecName: Full=30S ribosomal protein S18
gi|222420129|emb|CAL26943.1| 30S ribosomal protein S18 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 80
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTDLLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|67458534|ref|YP_246158.1| 30S ribosomal protein S18 [Rickettsia felis URRWXCal2]
gi|75536999|sp|Q4UN65|RS18_RICFE RecName: Full=30S ribosomal protein S18
gi|67004067|gb|AAY60993.1| 30S ribosomal protein S18 [Rickettsia felis URRWXCal2]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|13358116|ref|NP_078390.1| ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971294|ref|ZP_02553571.1| ribosomal protein S18 [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168281884|ref|ZP_02689551.1| ribosomal protein S18 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308033|ref|ZP_02690708.1| ribosomal protein S18 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762263|ref|YP_001752636.1| 30S ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|11387108|sp|Q9PPT8|RS18_UREPA RecName: Full=30S ribosomal protein S18
gi|189029695|sp|B1AJJ2|RS18_UREP2 RecName: Full=30S ribosomal protein S18
gi|11357040|pir||A82875 ribosomal protein S18 UU552 [imported] - Ureaplasma urealyticum
gi|6899558|gb|AAF30965.1|AE002154_1 ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827840|gb|ACA33102.1| ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902461|gb|EDT48750.1| ribosomal protein S18 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675876|gb|EDT87781.1| ribosomal protein S18 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700896|gb|EDU19178.1| ribosomal protein S18 [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 79
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN R+K C LS KG +DYKD+ LL RF++ KI R++ S + QR +A AIKR
Sbjct: 8 RNRKPRKKVCILSAKGIEHVDYKDVELLQRFINNNNKIASRRVTGASARMQRRIANAIKR 67
Query: 72 ARYLGLIAYV 81
AR++GL+ YV
Sbjct: 68 ARFVGLLPYV 77
>gi|302879168|ref|YP_003847732.1| 30S ribosomal protein S18 [Gallionella capsiferriformans ES-2]
gi|302581957|gb|ADL55968.1| ribosomal protein S18 [Gallionella capsiferriformans ES-2]
Length = 91
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R N+ RRK C + + +DYKD+ +L F+S+ GK++P+RI+ + QR+L+ A+K
Sbjct: 18 RNNLFKRRKFCRFTVEKIAEVDYKDVNILKEFISENGKLIPARITGTKTRYQRQLSTAVK 77
Query: 71 RARYLGLIAYVNL 83
RAR+L L+ Y +L
Sbjct: 78 RARFLALLPYTDL 90
>gi|239946941|ref|ZP_04698694.1| ribosomal protein S18 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921217|gb|EER21241.1| ribosomal protein S18 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 95
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK AR L
Sbjct: 27 RRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|224542221|ref|ZP_03682760.1| hypothetical protein CATMIT_01396 [Catenibacterium mitsuokai DSM
15897]
gi|224524856|gb|EEF93961.1| hypothetical protein CATMIT_01396 [Catenibacterium mitsuokai DSM
15897]
Length = 76
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK C + IDYKD+ LL RF+S GKI+P R++ S K QR+LA+AI
Sbjct: 3 FRRQRMGRRKVCYFTKNKIDYIDYKDVELLKRFISANGKIIPRRVTGTSAKYQRKLARAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|89256364|ref|YP_513726.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica LVS]
gi|167010709|ref|ZP_02275640.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC200]
gi|169656607|ref|YP_001428514.2| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367700|ref|ZP_04983721.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica 257]
gi|290954057|ref|ZP_06558678.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312550|ref|ZP_06803310.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica URFT1]
gi|122999744|sp|Q2A3H6|RS18_FRATH RecName: Full=30S ribosomal protein S18
gi|205562308|sp|A7NC55|RS18_FRATF RecName: Full=30S ribosomal protein S18
gi|89144195|emb|CAJ79464.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica LVS]
gi|134253511|gb|EBA52605.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica 257]
gi|164551675|gb|ABU61558.2| ribosomal protein S18 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 72
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTIEGVKEIDYKDVNKLKAYINETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|167973255|ref|ZP_02555532.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|167974085|ref|ZP_02556362.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975519|ref|ZP_02557796.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167988271|ref|ZP_02569942.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|168362598|ref|ZP_02695777.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|195867992|ref|ZP_03079988.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273409|ref|ZP_03205945.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554606|ref|YP_002284999.1| 30S ribosomal protein S18 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550837|ref|ZP_03771786.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551101|ref|ZP_03772047.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|229560079|sp|B5ZC59|RS18_UREU1 RecName: Full=30S ribosomal protein S18
gi|171903293|gb|EDT49582.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184209001|gb|EDU06044.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188019112|gb|EDU57152.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188998109|gb|EDU67206.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659849|gb|EDX53229.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660326|gb|EDX53587.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249929|gb|EDY74709.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209542107|gb|ACI60336.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378916|gb|EEH01281.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379991|gb|EEH02353.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 79
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN R+K C LS KG +DYKD+ LL RF++ KI R++ S + QR +A AIKR
Sbjct: 8 RNRKPRKKVCILSAKGIEHVDYKDVELLQRFINNNNKIASRRVTGASARMQRRIANAIKR 67
Query: 72 ARYLGLIAYV 81
AR++GL+ YV
Sbjct: 68 ARFVGLLPYV 77
>gi|75763190|ref|ZP_00742955.1| SSU ribosomal protein S18P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489322|gb|EAO52773.1| SSU ribosomal protein S18P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 64
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 2 CFFTANGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 61
Query: 81 VN 82
V
Sbjct: 62 VG 63
>gi|297621053|ref|YP_003709190.1| 30S ribosomal protein S18 [Waddlia chondrophila WSU 86-1044]
gi|297376354|gb|ADI38184.1| 30S ribosomal protein S18 [Waddlia chondrophila WSU 86-1044]
Length = 88
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K CP + G IDYK+I L++F+++RGKI+P RI+ VS QR L+ AIKRAR++
Sbjct: 22 RKKRCPFTTAGVKEIDYKNIEQLSKFITERGKILPRRITGVSAHHQRMLSTAIKRARHMA 81
Query: 77 LIAYV 81
L+ +V
Sbjct: 82 LLPFV 86
>gi|88800242|ref|ZP_01115809.1| ribosomal protein S18 [Reinekea sp. MED297]
gi|88776957|gb|EAR08165.1| ribosomal protein S18 [Reinekea sp. MED297]
Length = 75
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ LL ++++ GKIVPSRI+ S K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGITEIDYKDVDLLKGYITETGKIVPSRITGTSAKYQRQLATAIKRARYLALLPYTD 72
>gi|15616610|ref|NP_244916.1| 30S ribosomal protein S18 [Bacillus halodurans C-125]
gi|11387101|sp|Q9K5P0|RS18_BACHD RecName: Full=30S ribosomal protein S18
gi|10176673|dbj|BAB07767.1| 30S ribosomal protein S18 [Bacillus halodurans C-125]
Length = 77
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD+ LL +F+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCYFTVNKIEKIDYKDVDLLKKFVSERGKILPRRVTGTSAKYQRQLTTA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YV
Sbjct: 61 IKRARQIALLPYVT 74
>gi|71278137|ref|YP_267175.1| 30S ribosomal protein S18 [Colwellia psychrerythraea 34H]
gi|123774971|sp|Q489T9|RS18_COLP3 RecName: Full=30S ribosomal protein S18
gi|71143877|gb|AAZ24350.1| ribosomal protein S18 [Colwellia psychrerythraea 34H]
Length = 75
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ +GA IDYKDI L ++++ GKIVPSRI+ + K QR+L +AIKRARYL L+ Y +L
Sbjct: 14 TAEGATSIDYKDIATLKNYITESGKIVPSRITGTAAKYQRQLTRAIKRARYLSLLPYTDL 73
>gi|50085516|ref|YP_047026.1| 30S ribosomal protein S18 [Acinetobacter sp. ADP1]
gi|255319499|ref|ZP_05360713.1| ribosomal protein S18 [Acinetobacter radioresistens SK82]
gi|262378477|ref|ZP_06071634.1| ribosomal protein S18 [Acinetobacter radioresistens SH164]
gi|59798698|sp|Q6F9Q9|RS18_ACIAD RecName: Full=30S ribosomal protein S18
gi|49531492|emb|CAG69204.1| 30S ribosomal protein S18 [Acinetobacter sp. ADP1]
gi|255303439|gb|EET82642.1| ribosomal protein S18 [Acinetobacter radioresistens SK82]
gi|262299762|gb|EEY87674.1| ribosomal protein S18 [Acinetobacter radioresistens SH164]
Length = 75
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|255020465|ref|ZP_05292530.1| SSU ribosomal protein S18p [Acidithiobacillus caldus ATCC 51756]
gi|254970075|gb|EET27572.1| SSU ribosomal protein S18p [Acidithiobacillus caldus ATCC 51756]
Length = 92
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +G IDYKD++ L F+ + GKIVPSRI+ S QR+LA AIKRAR+L L+
Sbjct: 28 KFCRFKAEGVKEIDYKDLKTLQAFIGETGKIVPSRITGTSTLYQRQLATAIKRARFLALL 87
Query: 79 AYV 81
YV
Sbjct: 88 PYV 90
>gi|15834805|ref|NP_296564.1| 30S ribosomal protein S18 [Chlamydia muridarum Nigg]
gi|270284971|ref|ZP_06194365.1| 30S ribosomal protein S18 [Chlamydia muridarum Nigg]
gi|270288995|ref|ZP_06195297.1| 30S ribosomal protein S18 [Chlamydia muridarum Weiss]
gi|301336368|ref|ZP_07224570.1| 30S ribosomal protein S18 [Chlamydia muridarum MopnTet14]
gi|7404461|sp|P24286|RS18_CHLMU RecName: Full=30S ribosomal protein S18
gi|7190222|gb|AAF39059.1| ribosomal protein S18 [Chlamydia muridarum Nigg]
Length = 81
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 15 SHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
HRRK CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 8 EHRRKRFAKKCPFVSAGWKTIDYKDVVTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLIAYVN 82
RAR++GL+ +V
Sbjct: 68 RARHVGLLPFVG 79
>gi|117925749|ref|YP_866366.1| 30S ribosomal protein S18P [Magnetococcus sp. MC-1]
gi|205558242|sp|A0LAG7|RS18_MAGSM RecName: Full=30S ribosomal protein S18
gi|117609505|gb|ABK44960.1| SSU ribosomal protein S18P [Magnetococcus sp. MC-1]
Length = 106
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP +IDYKD ++L+R++++RGK+VPSRI+ V QR+L+ AIK
Sbjct: 34 RRPFFRRRKVCPFCADKGLKIDYKDPKMLSRYITERGKMVPSRITGVCAPHQRKLSVAIK 93
Query: 71 RARYLGLIAYV 81
RAR + L+ ++
Sbjct: 94 RARNIALLPFI 104
>gi|262369755|ref|ZP_06063083.1| 30S ribosomal protein S18 [Acinetobacter johnsonii SH046]
gi|262375305|ref|ZP_06068538.1| ribosomal protein S18 [Acinetobacter lwoffii SH145]
gi|262309559|gb|EEY90689.1| ribosomal protein S18 [Acinetobacter lwoffii SH145]
gi|262315823|gb|EEY96862.1| 30S ribosomal protein S18 [Acinetobacter johnsonii SH046]
Length = 75
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAENVTYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLS 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|15923357|ref|NP_370891.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926068|ref|NP_373601.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
N315]
gi|21282072|ref|NP_645160.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482597|ref|YP_039821.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485247|ref|YP_042468.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57652627|ref|YP_185330.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
COL]
gi|82750079|ref|YP_415820.1| 30S ribosomal protein S18 [Staphylococcus aureus RF122]
gi|87160951|ref|YP_493082.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194149|ref|YP_498939.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266854|ref|YP_001245797.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JH9]
gi|150392900|ref|YP_001315575.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JH1]
gi|151220571|ref|YP_001331393.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978695|ref|YP_001440954.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508639|ref|YP_001574298.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142675|ref|ZP_03567168.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316532|ref|ZP_04839745.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253730731|ref|ZP_04864896.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735110|ref|ZP_04869275.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005162|ref|ZP_05143763.2| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424511|ref|ZP_05600940.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427180|ref|ZP_05603582.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429816|ref|ZP_05606203.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
68-397]
gi|257432520|ref|ZP_05608883.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus E1410]
gi|257435422|ref|ZP_05611473.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M876]
gi|257794202|ref|ZP_05643181.1| 30S ribosomal protein S18 [Staphylococcus aureus A9781]
gi|258413513|ref|ZP_05681788.1| 30S ribosomal protein S18 [Staphylococcus aureus A9763]
gi|258421363|ref|ZP_05684290.1| SSU ribosomal protein S18 [Staphylococcus aureus A9719]
gi|258424580|ref|ZP_05687457.1| SSU ribosomal protein S18 [Staphylococcus aureus A9635]
gi|258436936|ref|ZP_05689276.1| ribosomal protein S18 [Staphylococcus aureus A9299]
gi|258444347|ref|ZP_05692681.1| ribosomal protein S18 [Staphylococcus aureus A8115]
gi|258444884|ref|ZP_05693205.1| ribosomal protein S18 [Staphylococcus aureus A6300]
gi|258448089|ref|ZP_05696218.1| ribosomal protein S18 [Staphylococcus aureus A6224]
gi|258453040|ref|ZP_05701033.1| ribosomal protein S18 [Staphylococcus aureus A5948]
gi|258455922|ref|ZP_05703877.1| ribosomal protein S18 [Staphylococcus aureus A5937]
gi|262048929|ref|ZP_06021809.1| 30S ribosomal protein S18 [Staphylococcus aureus D30]
gi|262052853|ref|ZP_06025038.1| 30S ribosomal protein S18 [Staphylococcus aureus 930918-3]
gi|269202015|ref|YP_003281284.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893528|ref|ZP_06301761.1| 30S ribosomal protein S18 [Staphylococcus aureus A8117]
gi|282902953|ref|ZP_06310846.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus C160]
gi|282907350|ref|ZP_06315198.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907693|ref|ZP_06315535.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912600|ref|ZP_06320396.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913226|ref|ZP_06321018.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M899]
gi|282915690|ref|ZP_06323461.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
D139]
gi|282921665|ref|ZP_06329383.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C427]
gi|282922341|ref|ZP_06330032.1| 30S ribosomal protein S18 [Staphylococcus aureus A9765]
gi|282922853|ref|ZP_06330543.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C101]
gi|282927422|ref|ZP_06335040.1| 30S ribosomal protein S18 [Staphylococcus aureus A10102]
gi|283768095|ref|ZP_06341010.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
H19]
gi|283959806|ref|ZP_06377247.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023376|ref|ZP_06377774.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
132]
gi|293498275|ref|ZP_06666129.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509216|ref|ZP_06667934.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M809]
gi|293550480|ref|ZP_06673152.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M1015]
gi|294850016|ref|ZP_06790754.1| 30S ribosomal protein S18 [Staphylococcus aureus A9754]
gi|295405640|ref|ZP_06815450.1| 30S ribosomal protein S18 [Staphylococcus aureus A8819]
gi|295426902|ref|ZP_06819541.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275194|ref|ZP_06857701.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MR1]
gi|297209119|ref|ZP_06925518.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245547|ref|ZP_06929415.1| 30S ribosomal protein S18 [Staphylococcus aureus A8796]
gi|297588886|ref|ZP_06947527.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MN8]
gi|300911120|ref|ZP_07128569.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380333|ref|ZP_07363053.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54039414|sp|P66468|RS18_STAAN RecName: Full=30S ribosomal protein S18
gi|54039415|sp|P66469|RS18_STAAW RecName: Full=30S ribosomal protein S18
gi|54042149|sp|P66467|RS18_STAAM RecName: Full=30S ribosomal protein S18
gi|56749541|sp|Q6GCA5|RS18_STAAS RecName: Full=30S ribosomal protein S18
gi|56749588|sp|Q6GJV1|RS18_STAAR RecName: Full=30S ribosomal protein S18
gi|71153727|sp|Q5HIS7|RS18_STAAC RecName: Full=30S ribosomal protein S18
gi|123098065|sp|Q2G111|RS18_STAA8 RecName: Full=30S ribosomal protein S18
gi|123736012|sp|Q2FJP6|RS18_STAA3 RecName: Full=30S ribosomal protein S18
gi|123741000|sp|Q2YVJ0|RS18_STAAB RecName: Full=30S ribosomal protein S18
gi|166222245|sp|A7WY61|RS18_STAA1 RecName: Full=30S ribosomal protein S18
gi|172048763|sp|A6QE49|RS18_STAAE RecName: Full=30S ribosomal protein S18
gi|189029691|sp|A6TYM0|RS18_STAA2 RecName: Full=30S ribosomal protein S18
gi|189029692|sp|A5IPU8|RS18_STAA9 RecName: Full=30S ribosomal protein S18
gi|189029693|sp|A8YZJ3|RS18_STAAT RecName: Full=30S ribosomal protein S18
gi|13700281|dbj|BAB41579.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
N315]
gi|14246135|dbj|BAB56529.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203508|dbj|BAB94208.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MW2]
gi|49240726|emb|CAG39387.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49243690|emb|CAG42114.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286813|gb|AAW38907.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus COL]
gi|82655610|emb|CAI80006.1| 30S ribosomal protein S18 [Staphylococcus aureus RF122]
gi|87126925|gb|ABD21439.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201707|gb|ABD29517.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147739923|gb|ABQ48221.1| SSU ribosomal protein S18P [Staphylococcus aureus subsp. aureus
JH9]
gi|149945352|gb|ABR51288.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus JH1]
gi|150373371|dbj|BAF66631.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156720830|dbj|BAF77247.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367448|gb|ABX28419.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725575|gb|EES94304.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726910|gb|EES95639.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273529|gb|EEV05631.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276811|gb|EEV08262.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280297|gb|EEV10884.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
68-397]
gi|257283399|gb|EEV13531.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus E1410]
gi|257286018|gb|EEV16134.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M876]
gi|257788174|gb|EEV26514.1| 30S ribosomal protein S18 [Staphylococcus aureus A9781]
gi|257839760|gb|EEV64229.1| 30S ribosomal protein S18 [Staphylococcus aureus A9763]
gi|257842787|gb|EEV67209.1| SSU ribosomal protein S18 [Staphylococcus aureus A9719]
gi|257845175|gb|EEV69212.1| SSU ribosomal protein S18 [Staphylococcus aureus A9635]
gi|257848727|gb|EEV72714.1| ribosomal protein S18 [Staphylococcus aureus A9299]
gi|257850606|gb|EEV74554.1| ribosomal protein S18 [Staphylococcus aureus A8115]
gi|257856202|gb|EEV79116.1| ribosomal protein S18 [Staphylococcus aureus A6300]
gi|257858604|gb|EEV81478.1| ribosomal protein S18 [Staphylococcus aureus A6224]
gi|257859250|gb|EEV82105.1| ribosomal protein S18 [Staphylococcus aureus A5948]
gi|257862134|gb|EEV84907.1| ribosomal protein S18 [Staphylococcus aureus A5937]
gi|259159254|gb|EEW44313.1| 30S ribosomal protein S18 [Staphylococcus aureus 930918-3]
gi|259163001|gb|EEW47563.1| 30S ribosomal protein S18 [Staphylococcus aureus D30]
gi|262074305|gb|ACY10278.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ED98]
gi|269939947|emb|CBI48319.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TW20]
gi|282315074|gb|EFB45460.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C101]
gi|282316080|gb|EFB46464.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C427]
gi|282320506|gb|EFB50845.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
D139]
gi|282323326|gb|EFB53645.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M899]
gi|282324296|gb|EFB54612.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328598|gb|EFB58869.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330249|gb|EFB59770.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590746|gb|EFB95822.1| 30S ribosomal protein S18 [Staphylococcus aureus A10102]
gi|282593467|gb|EFB98462.1| 30S ribosomal protein S18 [Staphylococcus aureus A9765]
gi|282597412|gb|EFC02371.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus C160]
gi|282764214|gb|EFC04341.1| 30S ribosomal protein S18 [Staphylococcus aureus A8117]
gi|283461974|gb|EFC09058.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
H19]
gi|283469674|emb|CAQ48885.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ST398]
gi|283789398|gb|EFC28225.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816089|gb|ADC36576.1| SSU ribosomal protein S18p [Staphylococcus aureus 04-02981]
gi|290919527|gb|EFD96603.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M1015]
gi|291097206|gb|EFE27464.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467968|gb|EFF10476.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M809]
gi|294823150|gb|EFG39581.1| 30S ribosomal protein S18 [Staphylococcus aureus A9754]
gi|294969715|gb|EFG45734.1| 30S ribosomal protein S18 [Staphylococcus aureus A8819]
gi|295129354|gb|EFG58981.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296886052|gb|EFH24986.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177533|gb|EFH36784.1| 30S ribosomal protein S18 [Staphylococcus aureus A8796]
gi|297577397|gb|EFH96110.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MN8]
gi|298693705|gb|ADI96927.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ED133]
gi|300887299|gb|EFK82495.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332104|gb|ADL22297.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750239|gb|ADL64416.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341314|gb|EFM07233.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312436518|gb|ADQ75589.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828889|emb|CBX33731.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130015|gb|EFT86004.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194827|gb|EFU25216.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198049|gb|EFU28381.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139324|gb|EFW31203.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142874|gb|EFW34670.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438827|gb|EGA96565.1| 30S ribosomal protein S18 [Staphylococcus aureus O11]
gi|323442576|gb|EGB00204.1| 30S ribosomal protein S18 [Staphylococcus aureus O46]
gi|329313060|gb|AEB87473.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
T0131]
gi|329724234|gb|EGG60747.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21189]
gi|329725657|gb|EGG62136.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21172]
gi|329732622|gb|EGG68972.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21193]
Length = 80
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKR+R++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRSRHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|319891325|ref|YP_004148200.1| SSU ribosomal protein S18p [Staphylococcus pseudintermedius
HKU10-03]
gi|317161021|gb|ADV04564.1| SSU ribosomal protein S18p [Staphylococcus pseudintermedius
HKU10-03]
gi|323465518|gb|ADX77671.1| ribosomal protein S18 [Staphylococcus pseudintermedius ED99]
Length = 80
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ +V
Sbjct: 73 LPFV 76
>gi|254467876|ref|ZP_05081282.1| ribosomal protein S18 [beta proteobacterium KB13]
gi|207086686|gb|EDZ63969.1| ribosomal protein S18 [beta proteobacterium KB13]
Length = 75
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R++ RR+ C S +G +DYKD+ LL F+ + GKI+P+RI+ + QR+L A+KR
Sbjct: 3 RDMIRRRRYCRFSAEGIKEVDYKDVDLLKDFILENGKIIPARITGTKARYQRQLTTAVKR 62
Query: 72 ARYLGLIAYVN 82
AR+L L+ Y +
Sbjct: 63 ARFLALLPYTD 73
>gi|53803659|ref|YP_114469.1| 30S ribosomal protein S18 [Methylococcus capsulatus str. Bath]
gi|59798627|sp|Q606H9|RS18_METCA RecName: Full=30S ribosomal protein S18
gi|53757420|gb|AAU91711.1| ribosomal protein S18 [Methylococcus capsulatus str. Bath]
Length = 76
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ C + + IDYKD+ L ++S+ GKIVPSRI+ S K QR+LA AIKRAR+L
Sbjct: 7 RRRYCRFTAEDVKEIDYKDLDTLREYVSETGKIVPSRITGTSAKYQRQLATAIKRARFLA 66
Query: 77 LIAYVN 82
L+ + +
Sbjct: 67 LLPFCD 72
>gi|126642217|ref|YP_001085201.1| 30S ribosomal protein S18 [Acinetobacter baumannii ATCC 17978]
gi|169633237|ref|YP_001706973.1| 30S ribosomal protein S18 [Acinetobacter baumannii SDF]
gi|169795503|ref|YP_001713296.1| 30S ribosomal protein S18 [Acinetobacter baumannii AYE]
gi|184158695|ref|YP_001847034.1| 30S ribosomal protein S18 [Acinetobacter baumannii ACICU]
gi|213158557|ref|YP_002319855.1| ribosomal protein S18 [Acinetobacter baumannii AB0057]
gi|215482990|ref|YP_002325195.1| ribosomal protein S18 [Acinetobacter baumannii AB307-0294]
gi|226952676|ref|ZP_03823140.1| 30S ribosomal protein S18 [Acinetobacter sp. ATCC 27244]
gi|239501437|ref|ZP_04660747.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB900]
gi|260549409|ref|ZP_05823628.1| ribosomal protein S18 [Acinetobacter sp. RUH2624]
gi|260554565|ref|ZP_05826786.1| ribosomal protein S18 [Acinetobacter baumannii ATCC 19606]
gi|262372195|ref|ZP_06065474.1| ribosomal protein S18 [Acinetobacter junii SH205]
gi|293609461|ref|ZP_06691763.1| 30S ribosomal protein S18 [Acinetobacter sp. SH024]
gi|294649990|ref|ZP_06727378.1| 30S ribosomal protein S18 [Acinetobacter haemolyticus ATCC 19194]
gi|301345097|ref|ZP_07225838.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB056]
gi|301510831|ref|ZP_07236068.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB058]
gi|301595324|ref|ZP_07240332.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB059]
gi|332850734|ref|ZP_08432981.1| ribosomal protein S18 [Acinetobacter baumannii 6013150]
gi|332866955|ref|ZP_08437281.1| ribosomal protein S18 [Acinetobacter baumannii 6013113]
gi|332873687|ref|ZP_08441630.1| ribosomal protein S18 [Acinetobacter baumannii 6014059]
gi|166220917|sp|A3M6Q5|RS18_ACIBT RecName: Full=30S ribosomal protein S18
gi|226735105|sp|B7H0J9|RS18_ACIB3 RecName: Full=30S ribosomal protein S18
gi|226735106|sp|B7IBC2|RS18_ACIB5 RecName: Full=30S ribosomal protein S18
gi|229470506|sp|B2HUA3|RS18_ACIBC RecName: Full=30S ribosomal protein S18
gi|229470507|sp|B0VM09|RS18_ACIBS RecName: Full=30S ribosomal protein S18
gi|229470508|sp|B0V7G6|RS18_ACIBY RecName: Full=30S ribosomal protein S18
gi|126388101|gb|ABO12599.1| 30S ribosomal protein S18 [Acinetobacter baumannii ATCC 17978]
gi|169148430|emb|CAM86296.1| 30S ribosomal protein S18 [Acinetobacter baumannii AYE]
gi|169152029|emb|CAP00909.1| 30S ribosomal protein S18 [Acinetobacter baumannii]
gi|183210289|gb|ACC57687.1| putative 30S ribosomal protein S18 [Acinetobacter baumannii
ACICU]
gi|213057717|gb|ACJ42619.1| ribosomal protein S18 [Acinetobacter baumannii AB0057]
gi|213989129|gb|ACJ59428.1| ribosomal protein S18 [Acinetobacter baumannii AB307-0294]
gi|226836582|gb|EEH68965.1| 30S ribosomal protein S18 [Acinetobacter sp. ATCC 27244]
gi|260407518|gb|EEX00992.1| ribosomal protein S18 [Acinetobacter sp. RUH2624]
gi|260411107|gb|EEX04404.1| ribosomal protein S18 [Acinetobacter baumannii ATCC 19606]
gi|262312220|gb|EEY93305.1| ribosomal protein S18 [Acinetobacter junii SH205]
gi|292824083|gb|EFF82898.1| 30S ribosomal protein S18 [Acinetobacter haemolyticus ATCC 19194]
gi|292827913|gb|EFF86276.1| 30S ribosomal protein S18 [Acinetobacter sp. SH024]
gi|322507495|gb|ADX02949.1| rpsR [Acinetobacter baumannii 1656-2]
gi|323518609|gb|ADX92990.1| 30S ribosomal protein S18 [Acinetobacter baumannii TCDC-AB0715]
gi|325122723|gb|ADY82246.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus PHEA-2]
gi|332730571|gb|EGJ61887.1| ribosomal protein S18 [Acinetobacter baumannii 6013150]
gi|332734336|gb|EGJ65463.1| ribosomal protein S18 [Acinetobacter baumannii 6013113]
gi|332738075|gb|EGJ68959.1| ribosomal protein S18 [Acinetobacter baumannii 6014059]
Length = 75
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLS 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|254424438|ref|ZP_05038156.1| ribosomal protein S18 [Synechococcus sp. PCC 7335]
gi|196191927|gb|EDX86891.1| ribosomal protein S18 [Synechococcus sp. PCC 7335]
Length = 71
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ K +IDYKD+ LL +F+++RGKI+P RI+ ++ K+QR+L KAIKRAR +
Sbjct: 4 FRRRVSPI--KPEEKIDYKDVDLLRKFVTERGKILPRRITGLTSKQQRDLTKAIKRARVV 61
Query: 76 GLIAYVN 82
L+ YVN
Sbjct: 62 ALLPYVN 68
>gi|56416480|ref|YP_153554.1| 30S ribosomal protein S18 [Anaplasma marginale str. St. Maries]
gi|81677669|sp|Q5PBN0|RS18_ANAMM RecName: Full=30S ribosomal protein S18
gi|56387712|gb|AAV86299.1| small subunit ribosomal protein S18 [Anaplasma marginale str. St.
Maries]
Length = 75
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+ LA+A+
Sbjct: 4 LKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSRKQKLLARAV 63
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ Y
Sbjct: 64 KRARFLALLPYC 75
>gi|291614206|ref|YP_003524363.1| ribosomal protein S18 [Sideroxydans lithotrophicus ES-1]
gi|291584318|gb|ADE11976.1| ribosomal protein S18 [Sideroxydans lithotrophicus ES-1]
Length = 89
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKDI +L F+++ GK++P+RI+ + QR+L+ A+KR
Sbjct: 17 RQLFKRRKFCRFTAEKIAEVDYKDINILKEFITENGKLIPARITGTKTRFQRQLSVAVKR 76
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 77 ARFLALLPYTDL 88
>gi|330443831|ref|YP_004376817.1| 30S ribosomal protein S18 [Chlamydophila pecorum E58]
gi|328806941|gb|AEB41114.1| ribosomal protein S18 [Chlamydophila pecorum E58]
Length = 82
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G IDYKD+ L +F+++RGKI+P RI+ VS + Q LA+AIKRAR LGL+
Sbjct: 17 KKCPFVSAGWKTIDYKDVETLKKFITERGKILPRRITGVSSRFQGILAQAIKRARLLGLL 76
Query: 79 AYVN 82
+V
Sbjct: 77 PFVG 80
>gi|262277395|ref|ZP_06055188.1| ribosomal protein S18 [alpha proteobacterium HIMB114]
gi|262224498|gb|EEY74957.1| ribosomal protein S18 [alpha proteobacterium HIMB114]
Length = 88
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K+CPL+ K I+YK+I+LL +++S KI+P+RI++VSH KQ+ L K IK+AR L L
Sbjct: 23 KKNCPLAKKSDEEINYKNIKLLKKYISDSAKILPTRITNVSHGKQKILVKEIKKARALAL 82
Query: 78 IAYV 81
+ YV
Sbjct: 83 LPYV 86
>gi|332971411|gb|EGK10369.1| 30S ribosomal protein S18 [Desmospora sp. 8437]
Length = 75
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR + RRK C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRRGNKRRKVCFFTVNKIEYIDYKDVDLLRKFISERGKILPRRVTGTSSKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ Y
Sbjct: 61 IKRARQMALLPYTT 74
>gi|212640664|ref|YP_002317184.1| 30S ribosomal protein S18 [Anoxybacillus flavithermus WK1]
gi|212562144|gb|ACJ35199.1| Ribosomal protein S18 [Anoxybacillus flavithermus WK1]
Length = 84
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + G IDYKD+ L +F+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 15 TKRRKVCYFTANGITHIDYKDVDTLKKFISERGKILPRRVTGTSAKYQRKLTIAIKRARQ 74
Query: 75 LGLIAYV 81
+ L+ YV
Sbjct: 75 MALLPYV 81
>gi|39938497|ref|NP_950263.1| 30S ribosomal protein S18 [Onion yellows phytoplasma OY-M]
gi|59798755|sp|Q6YRK3|RS18_ONYPE RecName: Full=30S ribosomal protein S18
gi|39721606|dbj|BAD04096.1| ribosomal protein S18 [Onion yellows phytoplasma OY-M]
Length = 79
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +ID+KDI LL RF++ RG+I+ R+++ S K QR+LA AIKRAR++
Sbjct: 13 RRKVCFFTENKVTKIDFKDIELLQRFITDRGRILSRRVTNTSAKWQRQLAIAIKRARHMA 72
Query: 77 LIAYV 81
LI ++
Sbjct: 73 LIPFI 77
>gi|299769499|ref|YP_003731525.1| 30S ribosomal protein S18 [Acinetobacter sp. DR1]
gi|298699587|gb|ADI90152.1| 30S ribosomal protein S18 [Acinetobacter sp. DR1]
Length = 75
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+ARYL
Sbjct: 7 RRKFCRFTAENVVYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQARYLS 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|28199811|ref|NP_780125.1| 30S ribosomal protein S18 [Xylella fastidiosa Temecula1]
gi|71275195|ref|ZP_00651482.1| Ribosomal protein S18 [Xylella fastidiosa Dixon]
gi|71898275|ref|ZP_00680449.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|71899833|ref|ZP_00681983.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|170731186|ref|YP_001776619.1| 30S ribosomal protein S18 [Xylella fastidiosa M12]
gi|182682563|ref|YP_001830723.1| 30S ribosomal protein S18 [Xylella fastidiosa M23]
gi|32129999|sp|Q87A84|RS18_XYLFT RecName: Full=30S ribosomal protein S18
gi|229560083|sp|B2I9S8|RS18_XYLF2 RecName: Full=30S ribosomal protein S18
gi|229560084|sp|B0U5H1|RS18_XYLFM RecName: Full=30S ribosomal protein S18
gi|28057932|gb|AAO29774.1| 30S ribosomal protein S18 [Xylella fastidiosa Temecula1]
gi|71164004|gb|EAO13719.1| Ribosomal protein S18 [Xylella fastidiosa Dixon]
gi|71730424|gb|EAO32505.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|71732014|gb|EAO34071.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|167965979|gb|ACA12989.1| 30S ribosomal protein S18 [Xylella fastidiosa M12]
gi|182632673|gb|ACB93449.1| ribosomal protein S18 [Xylella fastidiosa M23]
gi|307578843|gb|ADN62812.1| 30S ribosomal protein S18 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 76
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++L++ G+IVPSR++ K QR+L A+K AR+L
Sbjct: 7 RRKFCKFTAEGIKEIDYKDLNTLRQYLTENGRIVPSRVTGTKSKYQRQLTTAVKLARFLA 66
Query: 77 LIAYVN 82
LI Y +
Sbjct: 67 LIPYTD 72
>gi|253996552|ref|YP_003048616.1| 30S ribosomal protein S18 [Methylotenera mobilis JLW8]
gi|253983231|gb|ACT48089.1| ribosomal protein S18 [Methylotenera mobilis JLW8]
Length = 77
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ LL F+S+ KI+P+R++ + QR+L A+
Sbjct: 1 MARDMYKRRRYCRFSAEGIKEVDYKDVDLLKDFISENAKIIPARMTGTKARYQRQLTSAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|325981281|ref|YP_004293683.1| 30S ribosomal protein S18 [Nitrosomonas sp. AL212]
gi|325530800|gb|ADZ25521.1| ribosomal protein S18 [Nitrosomonas sp. AL212]
Length = 94
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + R+K C + +G ++DYKDI +L F+S+ GK++P+RI+ + QR+L AI+R
Sbjct: 22 RPLFKRKKFCRFTAEGIKQVDYKDIEILKDFISENGKVIPARITGTTSFYQRQLGTAIER 81
Query: 72 ARYLGLIAYVN 82
AR+L L+ Y +
Sbjct: 82 ARFLALLPYTD 92
>gi|157964105|ref|YP_001498929.1| 30S ribosomal protein S18 [Rickettsia massiliae MTU5]
gi|167011193|sp|A8F0E6|RS18_RICM5 RecName: Full=30S ribosomal protein S18
gi|157843881|gb|ABV84382.1| 30S ribosomal protein S18 [Rickettsia massiliae MTU5]
Length = 95
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L A+K AR L
Sbjct: 27 RRKGCPLSVPHAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAVKIARILA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|119713694|gb|ABL97744.1| ribosomal protein S18 [uncultured marine bacterium EB0_41B09]
Length = 75
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 50/73 (68%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ +L F+++ GK++P+RI+ + QR+L+ A+
Sbjct: 1 MARDMYKRRRYCRFSAEGISEVDYKDVSILKDFITENGKLIPARITGTKARYQRQLSTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ + +
Sbjct: 61 KRARFLALLPFTD 73
>gi|29840574|ref|NP_829680.1| 30S ribosomal protein S18 [Chlamydophila caviae GPIC]
gi|33301610|sp|Q821W8|RS18_CHLCV RecName: Full=30S ribosomal protein S18
gi|29834924|gb|AAP05558.1| ribosomal protein S18 [Chlamydophila caviae GPIC]
Length = 82
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 13 NVSHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
N HRRK CP G IDYKD L +F+++RGKI+P RI+ VS + Q L A
Sbjct: 7 NNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITERGKILPRRITGVSSRFQGTLTLA 66
Query: 69 IKRARYLGLIAYV 81
IKRAR++GL+ +V
Sbjct: 67 IKRARHIGLLPFV 79
>gi|15640395|ref|NP_230022.1| 30S ribosomal protein S18 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590975|ref|ZP_01678295.1| ribosomal protein S18 [Vibrio cholerae 2740-80]
gi|121730199|ref|ZP_01682589.1| ribosomal protein S18 [Vibrio cholerae V52]
gi|147675772|ref|YP_001218637.1| 30S ribosomal protein S18 [Vibrio cholerae O395]
gi|153216652|ref|ZP_01950559.1| ribosomal protein S18 [Vibrio cholerae 1587]
gi|153820254|ref|ZP_01972921.1| ribosomal protein S18 [Vibrio cholerae NCTC 8457]
gi|153824149|ref|ZP_01976816.1| ribosomal protein S18 [Vibrio cholerae B33]
gi|153827640|ref|ZP_01980307.1| ribosomal protein S18 [Vibrio cholerae MZO-2]
gi|153830451|ref|ZP_01983118.1| ribosomal protein S18 [Vibrio cholerae 623-39]
gi|227080580|ref|YP_002809131.1| ribosomal protein S18 [Vibrio cholerae M66-2]
gi|229504951|ref|ZP_04394462.1| SSU ribosomal protein S18p [Vibrio cholerae BX 330286]
gi|229508611|ref|ZP_04398107.1| SSU ribosomal protein S18p [Vibrio cholerae B33]
gi|229512612|ref|ZP_04402082.1| SSU ribosomal protein S18p [Vibrio cholerae TMA 21]
gi|229516023|ref|ZP_04405474.1| SSU ribosomal protein S18p [Vibrio cholerae RC9]
gi|229519925|ref|ZP_04409356.1| SSU ribosomal protein S18p [Vibrio cholerae TM 11079-80]
gi|229525062|ref|ZP_04414467.1| SSU ribosomal protein S18p [Vibrio cholerae bv. albensis VL426]
gi|229526943|ref|ZP_04416340.1| SSU ribosomal protein S18p [Vibrio cholerae 12129(1)]
gi|229606351|ref|YP_002876999.1| 30S ribosomal protein S18 [Vibrio cholerae MJ-1236]
gi|254286208|ref|ZP_04961167.1| ribosomal protein S18 [Vibrio cholerae AM-19226]
gi|254851679|ref|ZP_05241029.1| 30S ribosomal protein S18 [Vibrio cholerae MO10]
gi|255747166|ref|ZP_05421109.1| SSU ribosomal protein S18p [Vibrio cholera CIRS 101]
gi|258622405|ref|ZP_05717428.1| 30S ribosomal protein S18 [Vibrio mimicus VM573]
gi|258625990|ref|ZP_05720855.1| 30S ribosomal protein S18 [Vibrio mimicus VM603]
gi|261210395|ref|ZP_05924689.1| SSU ribosomal protein S18p [Vibrio sp. RC341]
gi|262163855|ref|ZP_06031595.1| SSU ribosomal protein S18p [Vibrio mimicus VM223]
gi|262166874|ref|ZP_06034596.1| SSU ribosomal protein S18p [Vibrio cholerae RC27]
gi|262172536|ref|ZP_06040214.1| SSU ribosomal protein S18p [Vibrio mimicus MB-451]
gi|262401541|ref|ZP_06078108.1| SSU ribosomal protein S18p [Vibrio sp. RC586]
gi|297582252|ref|ZP_06944167.1| ribosomal protein S18 [Vibrio cholerae RC385]
gi|298501265|ref|ZP_07011063.1| SSU ribosomal protein S18 [Vibrio cholerae MAK 757]
gi|11387102|sp|Q9KUZ0|RS18_VIBCH RecName: Full=30S ribosomal protein S18
gi|172047710|sp|A5F3K5|RS18_VIBC3 RecName: Full=30S ribosomal protein S18
gi|254812964|sp|C3LRA0|RS18_VIBCM RecName: Full=30S ribosomal protein S18
gi|9654785|gb|AAF93541.1| ribosomal protein S18 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547201|gb|EAX57328.1| ribosomal protein S18 [Vibrio cholerae 2740-80]
gi|121628057|gb|EAX60602.1| ribosomal protein S18 [Vibrio cholerae V52]
gi|124114163|gb|EAY32983.1| ribosomal protein S18 [Vibrio cholerae 1587]
gi|126509205|gb|EAZ71799.1| ribosomal protein S18 [Vibrio cholerae NCTC 8457]
gi|126518326|gb|EAZ75549.1| ribosomal protein S18 [Vibrio cholerae B33]
gi|146317655|gb|ABQ22194.1| ribosomal protein S18 [Vibrio cholerae O395]
gi|148874053|gb|EDL72188.1| ribosomal protein S18 [Vibrio cholerae 623-39]
gi|149737890|gb|EDM52795.1| ribosomal protein S18 [Vibrio cholerae MZO-2]
gi|150423623|gb|EDN15565.1| ribosomal protein S18 [Vibrio cholerae AM-19226]
gi|227008468|gb|ACP04680.1| ribosomal protein S18 [Vibrio cholerae M66-2]
gi|227012224|gb|ACP08434.1| ribosomal protein S18 [Vibrio cholerae O395]
gi|229335555|gb|EEO01035.1| SSU ribosomal protein S18p [Vibrio cholerae 12129(1)]
gi|229338643|gb|EEO03660.1| SSU ribosomal protein S18p [Vibrio cholerae bv. albensis VL426]
gi|229343053|gb|EEO08040.1| SSU ribosomal protein S18p [Vibrio cholerae TM 11079-80]
gi|229346926|gb|EEO11893.1| SSU ribosomal protein S18p [Vibrio cholerae RC9]
gi|229350394|gb|EEO15344.1| SSU ribosomal protein S18p [Vibrio cholerae TMA 21]
gi|229354379|gb|EEO19306.1| SSU ribosomal protein S18p [Vibrio cholerae B33]
gi|229358009|gb|EEO22925.1| SSU ribosomal protein S18p [Vibrio cholerae BX 330286]
gi|229369006|gb|ACQ59429.1| SSU ribosomal protein S18p [Vibrio cholerae MJ-1236]
gi|254847384|gb|EET25798.1| 30S ribosomal protein S18 [Vibrio cholerae MO10]
gi|255735215|gb|EET90617.1| SSU ribosomal protein S18p [Vibrio cholera CIRS 101]
gi|258581738|gb|EEW06622.1| 30S ribosomal protein S18 [Vibrio mimicus VM603]
gi|258585319|gb|EEW10045.1| 30S ribosomal protein S18 [Vibrio mimicus VM573]
gi|260840453|gb|EEX67019.1| SSU ribosomal protein S18p [Vibrio sp. RC341]
gi|261893612|gb|EEY39598.1| SSU ribosomal protein S18p [Vibrio mimicus MB-451]
gi|262024704|gb|EEY43383.1| SSU ribosomal protein S18p [Vibrio cholerae RC27]
gi|262027835|gb|EEY46500.1| SSU ribosomal protein S18p [Vibrio mimicus VM223]
gi|262352256|gb|EEZ01385.1| SSU ribosomal protein S18p [Vibrio sp. RC586]
gi|297533510|gb|EFH72356.1| ribosomal protein S18 [Vibrio cholerae RC385]
gi|297540019|gb|EFH76082.1| SSU ribosomal protein S18 [Vibrio cholerae MAK 757]
gi|327483226|gb|AEA77633.1| SSU ribosomal protein S18p [Vibrio cholerae LMA3894-4]
Length = 75
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRARYLALLPYTD 72
>gi|22299604|ref|NP_682851.1| 30S ribosomal protein S18 [Thermosynechococcus elongatus BP-1]
gi|59798900|sp|Q8DH98|RS18_THEEB RecName: Full=30S ribosomal protein S18
gi|22295788|dbj|BAC09613.1| 30S ribosomal protein S18 [Thermosynechococcus elongatus BP-1]
Length = 71
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL RF+++RGKI+P R++ ++ K+QR+LA AIKRAR +
Sbjct: 4 YRRRISPIP-PGQP-IDYKDVDLLRRFITERGKILPRRVTGLTAKQQRQLAVAIKRARIM 61
Query: 76 GLIAYVNL 83
L+ ++NL
Sbjct: 62 ALLPFLNL 69
>gi|73663680|ref|YP_302461.1| 30S ribosomal protein S18 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123747836|sp|Q49UQ2|RS18_STAS1 RecName: Full=30S ribosomal protein S18
gi|72496195|dbj|BAE19516.1| 30S ribosomal protein S18 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 80
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKR+R++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTLAIKRSRHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|226941616|ref|YP_002796690.1| 30S ribosomal protein S18 [Laribacter hongkongensis HLHK9]
gi|254812944|sp|C1DCR2|RS18_LARHH RecName: Full=30S ribosomal protein S18
gi|226716543|gb|ACO75681.1| RpsR [Laribacter hongkongensis HLHK9]
Length = 75
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RRK C + +G +DYK + LL F+++ GKI+P+RI+ + QR+L+ AI
Sbjct: 1 MARQLFKRRKFCRFTAEGIKEVDYKAVDLLKDFIAENGKIIPARITGTKARYQRQLSTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALMPYTD 73
>gi|224824683|ref|ZP_03697790.1| ribosomal protein S18 [Lutiella nitroferrum 2002]
gi|224603176|gb|EEG09352.1| ribosomal protein S18 [Lutiella nitroferrum 2002]
Length = 75
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + R+K C + +G IDYK + LL F+++ GKI+PSRI+ + QR+L AI
Sbjct: 1 MARQLFKRKKFCRFTAEGIKEIDYKSVDLLKDFIAENGKIIPSRITGTKARYQRQLTTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L + Y +
Sbjct: 61 KRARFLAFLPYTD 73
>gi|85713276|ref|ZP_01044299.1| Ribosomal protein S18 [Idiomarina baltica OS145]
gi|85692894|gb|EAQ30869.1| Ribosomal protein S18 [Idiomarina baltica OS145]
Length = 75
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 15 AEGVKEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLARAIKRARYLSLLPYTD 72
>gi|149071994|ref|YP_001293556.1| ribosomal protein S18 [Rhodomonas salina]
gi|205831411|sp|A6MVX7|RR18_RHDSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134302945|gb|ABO70749.1| ribosomal protein S18 [Rhodomonas salina]
Length = 73
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RRK+ P+ K IDYKD+ LL+ FL+++GKI+P R++ +++K+Q ++ KAIKRAR L
Sbjct: 4 YRRKASPI--KIGDAIDYKDVELLSNFLTEQGKILPKRLTGLTNKQQNKVTKAIKRARML 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 SLLPFVN 68
>gi|23100932|ref|NP_694399.1| 30S ribosomal protein S18 [Oceanobacillus iheyensis HTE831]
gi|59798907|sp|Q8EKV5|RS18_OCEIH RecName: Full=30S ribosomal protein S18
gi|22779167|dbj|BAC15433.1| 30S ribosomal protein S18 [Oceanobacillus iheyensis HTE831]
Length = 76
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 14 CYFTANGITHIDYKDVDLLRRFISERGKILPRRVTGTSAKYQRKLTIAIKRARTMALLPY 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|148284318|ref|YP_001248408.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Boryong]
gi|205616184|sp|A5CCY6|RS18_ORITB RecName: Full=30S ribosomal protein S18
gi|146739757|emb|CAM79615.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Boryong]
Length = 102
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 17 RRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RRK CPLS AP I YKD LL++F+S+ G+++P+R+++V KQREL KAIK AR
Sbjct: 33 RRKGCPLSAPDGTAPIITYKDPDLLSKFISECGRVLPARVTNVCRSKQRELTKAIKIARE 92
Query: 75 LGLIAYV 81
L L+ +V
Sbjct: 93 LALLPFV 99
>gi|220906338|ref|YP_002481649.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7425]
gi|219862949|gb|ACL43288.1| ribosomal protein S18 [Cyanothece sp. PCC 7425]
Length = 71
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ + A IDYKD+ LL RF+++RGKI+P RI+ ++ K+QR+L +++KRAR L
Sbjct: 4 YRRRVSPIKPEEA--IDYKDVDLLRRFITERGKILPRRITGLTAKQQRQLTQSVKRARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFIN 68
>gi|317130989|ref|YP_004097271.1| ribosomal protein S18 [Bacillus cellulosilyticus DSM 2522]
gi|315475937|gb|ADU32540.1| ribosomal protein S18 [Bacillus cellulosilyticus DSM 2522]
Length = 75
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRGRPKRRKVCYFTVNKITSIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
IKR+R + L+ YV
Sbjct: 61 IKRSRTMALLPYVT 74
>gi|189183704|ref|YP_001937489.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Ikeda]
gi|229560049|sp|B3CRZ8|RS18_ORITI RecName: Full=30S ribosomal protein S18
gi|189180475|dbj|BAG40255.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Ikeda]
Length = 102
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 17 RRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RRK CPLS AP I YKD LL++F+S+ G+++P+R+++V KQREL KAIK AR
Sbjct: 33 RRKGCPLSAPDGTAPIITYKDPDLLSKFISECGRVLPARVTNVCRSKQRELTKAIKIARE 92
Query: 75 LGLIAYV 81
L L+ +V
Sbjct: 93 LALLPFV 99
>gi|225023646|ref|ZP_03712838.1| hypothetical protein EIKCOROL_00509 [Eikenella corrodens ATCC
23834]
gi|224943528|gb|EEG24737.1| hypothetical protein EIKCOROL_00509 [Eikenella corrodens ATCC
23834]
Length = 76
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + +G ++DYK + LL F+S+ GKI+P+RI+ QR+L+ A+
Sbjct: 1 MARQTFKRRKFCRFTAEGIKQVDYKSVDLLKDFISENGKIIPARITGTKAHYQRQLSVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|56461038|ref|YP_156319.1| ribosomal protein S18 [Idiomarina loihiensis L2TR]
gi|81678373|sp|Q5QY03|RS18_IDILO RecName: Full=30S ribosomal protein S18
gi|56180048|gb|AAV82770.1| Ribosomal protein S18 [Idiomarina loihiensis L2TR]
Length = 75
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 17 GVKEIDYKDIATLKNYITETGKIVPSRITGTSAKYQRQLARAIKRARYLSLLPYTD 72
>gi|85057285|ref|YP_456201.1| 30S ribosomal protein S18 [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123725354|sp|Q2NKC1|RS18_AYWBP RecName: Full=30S ribosomal protein S18
gi|84789390|gb|ABC65122.1| SSU ribosomal protein S18P [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 79
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +ID+KDI LL RF++ RG+I+ R+++ S + QR+LA AIKRAR++
Sbjct: 13 RRKVCFFTENKVTKIDFKDIELLQRFITDRGRILSRRVTNTSARWQRQLAIAIKRARHMA 72
Query: 77 LIAYV 81
LI ++
Sbjct: 73 LIPFI 77
>gi|241888999|ref|ZP_04776303.1| ribosomal protein S18 [Gemella haemolysans ATCC 10379]
gi|241864248|gb|EER68626.1| ribosomal protein S18 [Gemella haemolysans ATCC 10379]
Length = 82
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNVEFIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|329769493|ref|ZP_08260903.1| 30S ribosomal protein S18 [Gemella sanguinis M325]
gi|328838708|gb|EGF88306.1| 30S ribosomal protein S18 [Gemella sanguinis M325]
Length = 82
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNIETIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|319778266|ref|YP_004129179.1| SSU ribosomal protein S18p [Taylorella equigenitalis MCE9]
gi|317108290|gb|ADU91036.1| SSU ribosomal protein S18p [Taylorella equigenitalis MCE9]
Length = 91
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKDI L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 23 RRKFCRFTAAGVDEIDYKDIDTLKDFITETGKIIPARLTGTKANYQRQLDTAIKRARFLA 82
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 83 LLPYTD 88
>gi|110835050|ref|YP_693909.1| 30S ribosomal protein S18 [Alcanivorax borkumensis SK2]
gi|254427140|ref|ZP_05040847.1| ribosomal protein S18 [Alcanivorax sp. DG881]
gi|123149283|sp|Q0VMG1|RS18_ALCBS RecName: Full=30S ribosomal protein S18
gi|110648161|emb|CAL17637.1| 30S ribosomal protein S18 [Alcanivorax borkumensis SK2]
gi|196193309|gb|EDX88268.1| ribosomal protein S18 [Alcanivorax sp. DG881]
Length = 76
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIK+AR+L
Sbjct: 7 RRKFCRFTAEGVEYIDYKDLDTLKAYITETGKIVPSRITGTKARYQRQLASAIKQARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|109900046|ref|YP_663301.1| ribosomal protein S18 [Pseudoalteromonas atlantica T6c]
gi|332308094|ref|YP_004435945.1| ribosomal protein S18 [Glaciecola agarilytica 4H-3-7+YE-5]
gi|123064136|sp|Q15PE1|RS18_PSEA6 RecName: Full=30S ribosomal protein S18
gi|109702327|gb|ABG42247.1| SSU ribosomal protein S18P [Pseudoalteromonas atlantica T6c]
gi|332175423|gb|AEE24677.1| ribosomal protein S18 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 75
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
S G +IDYKDI +L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 SADGVVQIDYKDIAMLKNYVTESGKIVPSRITGTSAKYQRQLSTAIKRARFLALLPYTD 72
>gi|317496133|ref|ZP_07954493.1| ribosomal protein S18 [Gemella moribillum M424]
gi|329768685|ref|ZP_08260169.1| 30S ribosomal protein S18 [Gemella haemolysans M341]
gi|316913708|gb|EFV35194.1| ribosomal protein S18 [Gemella moribillum M424]
gi|328836399|gb|EGF86064.1| 30S ribosomal protein S18 [Gemella haemolysans M341]
Length = 82
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNVEFIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|209528144|ref|ZP_03276618.1| ribosomal protein S18 [Arthrospira maxima CS-328]
gi|284050077|ref|ZP_06380287.1| 30S ribosomal protein S18 [Arthrospira platensis str. Paraca]
gi|209491432|gb|EDZ91813.1| ribosomal protein S18 [Arthrospira maxima CS-328]
gi|291568150|dbj|BAI90422.1| 30S ribosomal protein S18 [Arthrospira platensis NIES-39]
Length = 71
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ K IDYK+I LL +F+++RGKI+P RI+ ++ K+QR+L KAIKRAR L
Sbjct: 4 FRRQVSPIDPKTP--IDYKNIELLKKFMTERGKILPRRITGLTCKQQRDLTKAIKRARIL 61
Query: 76 GLIAYVN 82
++ +VN
Sbjct: 62 AMLPFVN 68
>gi|149182312|ref|ZP_01860791.1| RpsR [Bacillus sp. SG-1]
gi|148850004|gb|EDL64175.1| RpsR [Bacillus sp. SG-1]
Length = 65
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR L +AIKRAR + L+ Y
Sbjct: 2 CYFTSNGITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRRLTRAIKRARTMALLPY 61
Query: 81 V 81
V
Sbjct: 62 V 62
>gi|319938326|ref|ZP_08012722.1| 30S ribosomal protein S18 [Coprobacillus sp. 29_1]
gi|319806509|gb|EFW03171.1| 30S ribosomal protein S18 [Coprobacillus sp. 29_1]
Length = 76
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR+LA AI
Sbjct: 3 FKRQRMGRKKVCFFTKNKIDYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRQLAAAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|306820942|ref|ZP_07454562.1| 30S ribosomal protein S18 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551056|gb|EFM39027.1| 30S ribosomal protein S18 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 83
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P +G +IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR +
Sbjct: 17 RKKVDPFAGDKINQIDYKDVALLKKFISERGKILPRRVTGTSAKAQRKLTNAIKRARIVA 76
Query: 77 LIAYV 81
L+ Y
Sbjct: 77 LLPYT 81
>gi|295698471|ref|YP_003603126.1| ribosomal protein S18 [Candidatus Riesia pediculicola USDA]
gi|291157471|gb|ADD79916.1| ribosomal protein S18 [Candidatus Riesia pediculicola USDA]
Length = 76
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ N R+K C + + A IDYKDI L ++++ GKIVPSRI+ K QR+L++AI
Sbjct: 1 MKHNFFRRKKFCRFTAEKAREIDYKDIEKLRNYITESGKIVPSRITGTKVKYQRKLSRAI 60
Query: 70 KRARYLGLIAYVN 82
K ARYL L+ Y +
Sbjct: 61 KIARYLALLPYTD 73
>gi|223982851|ref|ZP_03633072.1| hypothetical protein HOLDEFILI_00346 [Holdemania filiformis DSM
12042]
gi|223965173|gb|EEF69464.1| hypothetical protein HOLDEFILI_00346 [Holdemania filiformis DSM
12042]
Length = 76
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNNITSIDYKDVELLKRFVSANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YVN
Sbjct: 70 LLPYVN 75
>gi|332712187|ref|ZP_08432115.1| SSU ribosomal protein S18P [Lyngbya majuscula 3L]
gi|332348993|gb|EGJ28605.1| SSU ribosomal protein S18P [Lyngbya majuscula 3L]
Length = 71
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 44/52 (84%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+++RGKI+P RI++++ ++QR+L AIKRAR+L L+ Y+N
Sbjct: 17 IDYKDVELLRKFITERGKILPRRITNLTTQQQRKLTTAIKRARFLALLPYIN 68
>gi|320120636|gb|EFE27984.2| 30S ribosomal protein S18 [Filifactor alocis ATCC 35896]
Length = 77
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
NV R+K P +G IDYKD+ LL +++S+RGKI+P R++ S K QR+L AIKRA
Sbjct: 7 NVRKRKKVDPFAGDKINTIDYKDVALLKKYISERGKILPRRVTGTSAKAQRKLTLAIKRA 66
Query: 73 RYLGLIAYV 81
R + L+ Y
Sbjct: 67 RNIALLPYT 75
>gi|27364783|ref|NP_760311.1| 30S ribosomal protein S18 [Vibrio vulnificus CMCP6]
gi|28899512|ref|NP_799117.1| 30S ribosomal protein S18 [Vibrio parahaemolyticus RIMD 2210633]
gi|37681166|ref|NP_935775.1| 30S ribosomal protein S18 [Vibrio vulnificus YJ016]
gi|84393175|ref|ZP_00991939.1| 30S ribosomal protein S18 [Vibrio splendidus 12B01]
gi|86148223|ref|ZP_01066520.1| 30S ribosomal protein S18 [Vibrio sp. MED222]
gi|91227275|ref|ZP_01261700.1| 30S ribosomal protein S18 [Vibrio alginolyticus 12G01]
gi|148981037|ref|ZP_01816257.1| 30S ribosomal protein S18 [Vibrionales bacterium SWAT-3]
gi|149191590|ref|ZP_01869835.1| 30S ribosomal protein S18 [Vibrio shilonii AK1]
gi|153835847|ref|ZP_01988514.1| ribosomal protein S18 [Vibrio harveyi HY01]
gi|153846004|ref|ZP_01993817.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ3810]
gi|156972401|ref|YP_001443308.1| 30S ribosomal protein S18 [Vibrio harveyi ATCC BAA-1116]
gi|163803111|ref|ZP_02196995.1| 30S ribosomal protein S18 [Vibrio sp. AND4]
gi|218708334|ref|YP_002415955.1| 30S ribosomal protein S18 [Vibrio splendidus LGP32]
gi|260366343|ref|ZP_05778789.1| ribosomal protein S18 [Vibrio parahaemolyticus K5030]
gi|260767147|ref|ZP_05876091.1| SSU ribosomal protein S18p [Vibrio furnissii CIP 102972]
gi|260773678|ref|ZP_05882594.1| SSU ribosomal protein S18p [Vibrio metschnikovii CIP 69.14]
gi|260775635|ref|ZP_05884532.1| SSU ribosomal protein S18p [Vibrio coralliilyticus ATCC BAA-450]
gi|260879410|ref|ZP_05891765.1| ribosomal protein S18 [Vibrio parahaemolyticus AN-5034]
gi|260896871|ref|ZP_05905367.1| ribosomal protein S18 [Vibrio parahaemolyticus Peru-466]
gi|260902023|ref|ZP_05910418.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ4037]
gi|261254037|ref|ZP_05946610.1| SSU ribosomal protein S18p [Vibrio orientalis CIP 102891]
gi|262393107|ref|YP_003284961.1| 30S ribosomal protein S18p [Vibrio sp. Ex25]
gi|269961474|ref|ZP_06175838.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269964320|ref|ZP_06178568.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269964440|ref|ZP_06178681.1| 30S ribosomal protein S18 [Vibrio alginolyticus 40B]
gi|312881936|ref|ZP_07741693.1| 30S ribosomal protein S18 [Vibrio caribbenthicus ATCC BAA-2122]
gi|320155177|ref|YP_004187556.1| 30S ribosomal protein S18p [Vibrio vulnificus MO6-24/O]
gi|323493029|ref|ZP_08098164.1| 30S ribosomal protein S18 [Vibrio brasiliensis LMG 20546]
gi|323496054|ref|ZP_08101114.1| 30S ribosomal protein S18 [Vibrio sinaloensis DSM 21326]
gi|54039420|sp|P66479|RS18_VIBVU RecName: Full=30S ribosomal protein S18
gi|54042152|sp|P66478|RS18_VIBPA RecName: Full=30S ribosomal protein S18
gi|59798812|sp|Q7MH90|RS18_VIBVY RecName: Full=30S ribosomal protein S18
gi|166222256|sp|A7MSX6|RS18_VIBHB RecName: Full=30S ribosomal protein S18
gi|254812965|sp|B7VI66|RS18_VIBSL RecName: Full=30S ribosomal protein S18
gi|27360928|gb|AAO09838.1| ribosomal protein S18 [Vibrio vulnificus CMCP6]
gi|28807748|dbj|BAC61001.1| ribosomal protein S18 [Vibrio parahaemolyticus RIMD 2210633]
gi|37199917|dbj|BAC95746.1| ribosomal protein S18 [Vibrio vulnificus YJ016]
gi|84376227|gb|EAP93111.1| 30S ribosomal protein S18 [Vibrio splendidus 12B01]
gi|85833993|gb|EAQ52154.1| 30S ribosomal protein S18 [Vibrio sp. MED222]
gi|91188669|gb|EAS74958.1| 30S ribosomal protein S18 [Vibrio alginolyticus 12G01]
gi|145961013|gb|EDK26336.1| 30S ribosomal protein S18 [Vibrionales bacterium SWAT-3]
gi|148834548|gb|EDL51540.1| 30S ribosomal protein S18 [Vibrio shilonii AK1]
gi|148865657|gb|EDL66797.1| ribosomal protein S18 [Vibrio harveyi HY01]
gi|149745013|gb|EDM56315.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ3810]
gi|156523995|gb|ABU69081.1| hypothetical protein VIBHAR_00021 [Vibrio harveyi ATCC BAA-1116]
gi|159173103|gb|EDP57935.1| 30S ribosomal protein S18 [Vibrio sp. AND4]
gi|218321353|emb|CAV17303.1| Ribosomal protein S18 [Vibrio splendidus LGP32]
gi|260608816|gb|EEX34981.1| SSU ribosomal protein S18p [Vibrio coralliilyticus ATCC BAA-450]
gi|260612817|gb|EEX38020.1| SSU ribosomal protein S18p [Vibrio metschnikovii CIP 69.14]
gi|260617868|gb|EEX43043.1| SSU ribosomal protein S18p [Vibrio furnissii CIP 102972]
gi|260937428|gb|EEX93417.1| SSU ribosomal protein S18p [Vibrio orientalis CIP 102891]
gi|262336701|gb|ACY50496.1| SSU ribosomal protein S18p [Vibrio sp. Ex25]
gi|269830778|gb|EEZ84996.1| 30S ribosomal protein S18 [Vibrio alginolyticus 40B]
gi|269830944|gb|EEZ85155.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269833851|gb|EEZ87946.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|308086286|gb|EFO35981.1| ribosomal protein S18 [Vibrio parahaemolyticus Peru-466]
gi|308089682|gb|EFO39377.1| ribosomal protein S18 [Vibrio parahaemolyticus AN-5034]
gi|308109417|gb|EFO46957.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ4037]
gi|308112694|gb|EFO50234.1| ribosomal protein S18 [Vibrio parahaemolyticus K5030]
gi|309370372|gb|EFP97867.1| 30S ribosomal protein S18 [Vibrio caribbenthicus ATCC BAA-2122]
gi|315181337|gb|ADT88251.1| 30S ribosomal protein S18 [Vibrio furnissii NCTC 11218]
gi|319930489|gb|ADV85353.1| SSU ribosomal protein S18p [Vibrio vulnificus MO6-24/O]
gi|323312727|gb|EGA65856.1| 30S ribosomal protein S18 [Vibrio brasiliensis LMG 20546]
gi|323318798|gb|EGA71749.1| 30S ribosomal protein S18 [Vibrio sinaloensis DSM 21326]
gi|328472355|gb|EGF43225.1| 30S ribosomal protein S18 [Vibrio parahaemolyticus 10329]
Length = 75
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRSRYLALLPYTD 72
>gi|297585576|ref|YP_003701356.1| 30S ribosomal protein S18 [Bacillus selenitireducens MLS10]
gi|297144033|gb|ADI00791.1| ribosomal protein S18 [Bacillus selenitireducens MLS10]
Length = 75
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRGRPKRRKVCYFTVNKITKIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
+KR+R + L+ +V
Sbjct: 61 VKRSRTMALLPFVT 74
>gi|34499093|ref|NP_903308.1| 30S ribosomal protein S18 [Chromobacterium violaceum ATCC 12472]
gi|59798832|sp|Q7NRY9|RS18_CHRVO RecName: Full=30S ribosomal protein S18
gi|34104944|gb|AAQ61300.1| 30S ribosomal protein S18 [Chromobacterium violaceum ATCC 12472]
Length = 75
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + R+K C + +G IDYK + LL F+++ GKI+P+RI+ + QR+L AI
Sbjct: 1 MARQLFKRKKFCRFTAEGIKEIDYKSVDLLKDFIAENGKIIPARITGTKARYQRQLTTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L + Y +
Sbjct: 61 KRARFLAFLPYTD 73
>gi|144514|gb|AAA23134.1| ribosomal protein S18 homolog [Chlamydia muridarum]
Length = 77
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 15 SHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
HRRK CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 8 EHRRKRFAKKCPFVSAGWKTIDYKDVVTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLI 78
RAR++GL+
Sbjct: 68 RARHVGLL 75
>gi|212697312|ref|ZP_03305440.1| hypothetical protein ANHYDRO_01880 [Anaerococcus hydrogenalis DSM
7454]
gi|325848774|ref|ZP_08170284.1| ribosomal protein S18 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675761|gb|EEB35368.1| hypothetical protein ANHYDRO_01880 [Anaerococcus hydrogenalis DSM
7454]
gi|325480418|gb|EGC83480.1| ribosomal protein S18 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 74
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RRN R+K P + IDYKDI L RF+S RGKI+P R++ ++ K QRE+ +AI
Sbjct: 1 MRRNFRPRKKVDPFVKDPSKVIDYKDIDTLKRFISDRGKILPRRVTGLNAKHQREITRAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y +
Sbjct: 61 KRARQVALLPYED 73
>gi|254784760|ref|YP_003072188.1| 30S ribosomal protein S18 [Teredinibacter turnerae T7901]
gi|259494820|sp|C5BN46|RS18_TERTT RecName: Full=30S ribosomal protein S18
gi|237683566|gb|ACR10830.1| ribosomal protein S18 [Teredinibacter turnerae T7901]
Length = 75
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLETLKAYISETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYTD 72
>gi|256545548|ref|ZP_05472908.1| 30S ribosomal protein S18 [Anaerococcus vaginalis ATCC 51170]
gi|256398759|gb|EEU12376.1| 30S ribosomal protein S18 [Anaerococcus vaginalis ATCC 51170]
Length = 74
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RRN R+K P + IDYKDI L RF+S RGKI+P R++ ++ K QRE+ +AI
Sbjct: 1 MRRNFRPRKKVDPFVKDPSKVIDYKDIDTLKRFVSDRGKILPRRVTGLNAKHQREITRAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y +
Sbjct: 61 KRARQVALLPYED 73
>gi|169351670|ref|ZP_02868608.1| hypothetical protein CLOSPI_02451 [Clostridium spiroforme DSM
1552]
gi|169291892|gb|EDS74025.1| hypothetical protein CLOSPI_02451 [Clostridium spiroforme DSM
1552]
Length = 76
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR LA AI
Sbjct: 3 FRKQRMGRKKVCYFTKNNITYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRMLATAI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYV 74
>gi|153872064|ref|ZP_02001064.1| Ribosomal protein S18 [Beggiatoa sp. PS]
gi|152071467|gb|EDN68933.1| Ribosomal protein S18 [Beggiatoa sp. PS]
Length = 75
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +G IDYKD+ LL ++++ GKIVPSRI+ K QR+LA A+K AR+L
Sbjct: 7 RKKYCRFTAEGIKEIDYKDLNLLKGYVTETGKIVPSRITGTRTKYQRQLATAVKLARFLA 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYSD 72
>gi|218246505|ref|YP_002371876.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 8801]
gi|257059538|ref|YP_003137426.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 8802]
gi|218166983|gb|ACK65720.1| ribosomal protein S18 [Cyanothece sp. PCC 8801]
gi|256589704|gb|ACV00591.1| ribosomal protein S18 [Cyanothece sp. PCC 8802]
Length = 71
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 43/52 (82%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL +F+++RGK++P RI+ ++ K+QR+L KA+KRAR+L L+ +VN
Sbjct: 17 IDYKDTELLRKFITERGKLLPRRITGLTAKQQRDLTKAVKRARFLALLPFVN 68
>gi|163784039|ref|ZP_02178996.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880696|gb|EDP74243.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
Length = 79
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P + R+K C +G DYK+I +L F+S+RGKIVPSRIS K QR
Sbjct: 1 MANNPAQKPFFQKRKKYCKFCAEGI-EPDYKNIDILKEFISERGKIVPSRISGTCGKHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
+LA AIKRAR L L+ YV
Sbjct: 60 KLAVAIKRARQLALLPYV 77
>gi|239995320|ref|ZP_04715844.1| 30S ribosomal protein S18 [Alteromonas macleodii ATCC 27126]
gi|332143173|ref|YP_004428911.1| 30S ribosomal protein S18 [Alteromonas macleodii str. 'Deep
ecotype']
gi|229470505|sp|B4S011|RS18_ALTMD RecName: Full=30S ribosomal protein S18
gi|327553195|gb|AEA99913.1| 30S ribosomal protein S18 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 75
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKDI L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 TAEGVTEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLSSAIKRARFLALLPYTD 72
>gi|328956391|ref|YP_004373777.1| 30S ribosomal protein S18 [Carnobacterium sp. 17-4]
gi|328672715|gb|AEB28761.1| 30S ribosomal protein S18 [Carnobacterium sp. 17-4]
Length = 79
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK + +DYKDI LL RF+S+RG+I+P R++ K QR+L KAIK
Sbjct: 5 RRGGKKRRKVDFFAANHIEHVDYKDIDLLKRFISERGRILPRRVTGTYAKNQRKLTKAIK 64
Query: 71 RARYLGLIAYVN 82
RAR +GL+ +V
Sbjct: 65 RARIMGLLPFVT 76
>gi|331007839|ref|ZP_08330938.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC1989]
gi|330418356|gb|EGG92923.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC1989]
Length = 76
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGTKQIDYKDLETLKAYISETGKIVPSRITGTKAKYQRQLSTAIKRARYLALVPYTD 72
>gi|299820814|ref|ZP_07052703.1| 30S ribosomal protein S18 [Listeria grayi DSM 20601]
gi|299817835|gb|EFI85070.1| 30S ribosomal protein S18 [Listeria grayi DSM 20601]
Length = 79
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKR+R + L
Sbjct: 12 KKVCYFTANGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMAL 71
Query: 78 IAYV 81
+ +V
Sbjct: 72 LPFV 75
>gi|323342372|ref|ZP_08082604.1| 30S ribosomal protein S18 [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463484|gb|EFY08678.1| 30S ribosomal protein S18 [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 77
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD+ LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RRKVCYFTKNNVKTIDYKDVELLKRFISANGKIIPRRVTGTKAKYQRPLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 70 LLPYVS 75
>gi|167755264|ref|ZP_02427391.1| hypothetical protein CLORAM_00769 [Clostridium ramosum DSM 1402]
gi|237735012|ref|ZP_04565493.1| 30S ribosomal protein S18 [Mollicutes bacterium D7]
gi|167705314|gb|EDS19893.1| hypothetical protein CLORAM_00769 [Clostridium ramosum DSM 1402]
gi|229381788|gb|EEO31879.1| 30S ribosomal protein S18 [Coprobacillus sp. D7]
Length = 76
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR LA AI
Sbjct: 3 FRKQRMGRKKVCYFTKNKITYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|310659868|ref|YP_003937589.1| 30S ribosomal protein S18 [Clostridium sticklandii DSM 519]
gi|308826646|emb|CBH22684.1| 30S ribosomal subunit protein S18 [Clostridium sticklandii]
Length = 78
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P +GK IDYKD+ LL +++S+RGKI+P RI+ S K QR+L AIKR+R +
Sbjct: 12 RKKVDPFAGKKINMIDYKDVNLLKKYISERGKILPRRITGTSAKAQRKLTLAIKRSRNIA 71
Query: 77 LIAYV 81
L+ YV
Sbjct: 72 LLPYV 76
>gi|113477197|ref|YP_723258.1| 30S ribosomal protein S18 [Trichodesmium erythraeum IMS101]
gi|122964596|sp|Q10Y89|RS18_TRIEI RecName: Full=30S ribosomal protein S18
gi|110168245|gb|ABG52785.1| SSU ribosomal protein S18P [Trichodesmium erythraeum IMS101]
Length = 72
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+ G P IDYKD+ LL +++++RGKI+P RI+ ++ K+QR+L K+IKRAR +
Sbjct: 5 YRKRVSPIKP-GDP-IDYKDVELLKKYITERGKIMPRRITGLTSKQQRDLTKSIKRARLV 62
Query: 76 GLIAYVN 82
L+ YVN
Sbjct: 63 ALLPYVN 69
>gi|11467693|ref|NP_050745.1| ribosomal protein S18 [Guillardia theta]
gi|6094134|sp|O78488|RR18_GUITH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|3603018|gb|AAC35679.1| ribosomal protein S18 [Guillardia theta]
Length = 73
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK+ P+ K IDYKD+ LL++FL+++GKI+P RI+ ++ K+Q L KA+KRAR L
Sbjct: 4 FRRKNSPI--KKDDFIDYKDVELLSKFLTEQGKILPRRITGLTMKQQSRLTKAVKRARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFIN 68
>gi|16799118|ref|NP_469386.1| 30S ribosomal protein S18 [Listeria innocua Clip11262]
gi|16802094|ref|NP_463579.1| 30S ribosomal protein S18 [Listeria monocytogenes EGD-e]
gi|46906277|ref|YP_012666.1| 30S ribosomal protein S18 [Listeria monocytogenes serotype 4b
str. F2365]
gi|47092171|ref|ZP_00229963.1| ribosomal protein S18 [Listeria monocytogenes str. 4b H7858]
gi|47095114|ref|ZP_00232726.1| ribosomal protein S18 [Listeria monocytogenes str. 1/2a F6854]
gi|116871459|ref|YP_848240.1| 30S ribosomal protein S18 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217965895|ref|YP_002351573.1| ribosomal protein S18 [Listeria monocytogenes HCC23]
gi|224498256|ref|ZP_03666605.1| 30S ribosomal protein S18 [Listeria monocytogenes Finland 1988]
gi|224503029|ref|ZP_03671336.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL R2-561]
gi|226222691|ref|YP_002756798.1| ribosomal protein S18 [Listeria monocytogenes Clip81459]
gi|254824725|ref|ZP_05229726.1| rpsR [Listeria monocytogenes FSL J1-194]
gi|254827477|ref|ZP_05232164.1| ribosomal protein S18 [Listeria monocytogenes FSL N3-165]
gi|254830661|ref|ZP_05235316.1| 30S ribosomal protein S18 [Listeria monocytogenes 10403S]
gi|254851788|ref|ZP_05241136.1| rpsR [Listeria monocytogenes FSL R2-503]
gi|254899633|ref|ZP_05259557.1| 30S ribosomal protein S18 [Listeria monocytogenes J0161]
gi|254913164|ref|ZP_05263176.1| ribosomal protein S18 [Listeria monocytogenes J2818]
gi|254930815|ref|ZP_05264174.1| ribosomal protein S18 [Listeria monocytogenes HPB2262]
gi|254937545|ref|ZP_05269242.1| ribosomal protein S18 [Listeria monocytogenes F6900]
gi|254992264|ref|ZP_05274454.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J2-064]
gi|255017794|ref|ZP_05289920.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL F2-515]
gi|255022435|ref|ZP_05294421.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J1-208]
gi|255025177|ref|ZP_05297163.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J2-003]
gi|255030368|ref|ZP_05302319.1| 30S ribosomal protein S18 [Listeria monocytogenes LO28]
gi|255519953|ref|ZP_05387190.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J1-175]
gi|284803213|ref|YP_003415078.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5578]
gi|284996354|ref|YP_003418122.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5923]
gi|289433406|ref|YP_003463278.1| 30S ribosomal protein S18 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|290892370|ref|ZP_06555365.1| ribosomal protein S18 [Listeria monocytogenes FSL J2-071]
gi|300765696|ref|ZP_07075673.1| ribosomal protein S18 [Listeria monocytogenes FSL N1-017]
gi|54039413|sp|P66462|RS18_LISIN RecName: Full=30S ribosomal protein S18
gi|54042148|sp|P66461|RS18_LISMO RecName: Full=30S ribosomal protein S18
gi|59798761|sp|Q725B8|RS18_LISMF RecName: Full=30S ribosomal protein S18
gi|123463368|sp|A0AEM3|RS18_LISW6 RecName: Full=30S ribosomal protein S18
gi|254812945|sp|B8DAM0|RS18_LISMH RecName: Full=30S ribosomal protein S18
gi|259494813|sp|C1KV87|RS18_LISMC RecName: Full=30S ribosomal protein S18
gi|16409405|emb|CAC98261.1| ribosomal protein S18 [Listeria monocytogenes EGD-e]
gi|16412460|emb|CAC95272.1| ribosomal protein S18 [Listeria innocua Clip11262]
gi|46879541|gb|AAT02843.1| ribosomal protein S18 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016459|gb|EAL07380.1| ribosomal protein S18 [Listeria monocytogenes str. 1/2a F6854]
gi|47019373|gb|EAL10114.1| ribosomal protein S18 [Listeria monocytogenes str. 4b H7858]
gi|116740337|emb|CAK19455.1| 30S ribosomal protein S18 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217335165|gb|ACK40959.1| ribosomal protein S18 [Listeria monocytogenes HCC23]
gi|225875153|emb|CAS03845.1| ribosomal protein S18 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599854|gb|EEW13179.1| ribosomal protein S18 [Listeria monocytogenes FSL N3-165]
gi|258605081|gb|EEW17689.1| rpsR [Listeria monocytogenes FSL R2-503]
gi|258610146|gb|EEW22754.1| ribosomal protein S18 [Listeria monocytogenes F6900]
gi|284058775|gb|ADB69716.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5578]
gi|284061821|gb|ADB72760.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5923]
gi|289169650|emb|CBH26186.1| 30S ribosomal protein S18 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|290558196|gb|EFD91715.1| ribosomal protein S18 [Listeria monocytogenes FSL J2-071]
gi|293582357|gb|EFF94389.1| ribosomal protein S18 [Listeria monocytogenes HPB2262]
gi|293591165|gb|EFF99499.1| ribosomal protein S18 [Listeria monocytogenes J2818]
gi|293593964|gb|EFG01725.1| rpsR [Listeria monocytogenes FSL J1-194]
gi|300513569|gb|EFK40639.1| ribosomal protein S18 [Listeria monocytogenes FSL N1-017]
gi|307569562|emb|CAR82741.1| rpsR [Listeria monocytogenes L99]
gi|328468374|gb|EGF39380.1| 30S ribosomal protein S18 [Listeria monocytogenes 1816]
gi|328476182|gb|EGF46888.1| 30S ribosomal protein S18 [Listeria monocytogenes 220]
gi|332310392|gb|EGJ23487.1| 30S ribosomal protein S18 [Listeria monocytogenes str. Scott A]
Length = 79
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKR+R + L
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMAL 71
Query: 78 IAYV 81
+ +V
Sbjct: 72 LPFV 75
>gi|32491010|ref|NP_871264.1| hypothetical protein WGLp261 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340412|sp|Q8D2U3|RS18_WIGBR RecName: Full=30S ribosomal protein S18
gi|25166216|dbj|BAC24407.1| rpsR [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 75
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKDI LL ++++ GKIVPSRI+ + QR+L++A+KRARYL
Sbjct: 7 RRKFCRFTLEKINNIDYKDIILLKNYITENGKIVPSRITGTRARYQRQLSRAVKRARYLS 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYTD 72
>gi|294501974|ref|YP_003565674.1| 30S ribosomal protein S18 [Bacillus megaterium QM B1551]
gi|295707325|ref|YP_003600400.1| 30S ribosomal protein S18 [Bacillus megaterium DSM 319]
gi|294351911|gb|ADE72240.1| 30S ribosomal protein S18 [Bacillus megaterium QM B1551]
gi|294804984|gb|ADF42050.1| 30S ribosomal protein S18 [Bacillus megaterium DSM 319]
Length = 79
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ +L +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 16 CFFTANGITHIDYKDVDMLKKFVSERGKILPRRVTGTSAKYQRKLTIAIKRARQMALLPY 75
Query: 81 VN 82
V+
Sbjct: 76 VS 77
>gi|329896991|ref|ZP_08271784.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC3088]
gi|328921499|gb|EGG28884.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC3088]
Length = 75
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLETLKAYITETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYTD 72
>gi|298372706|ref|ZP_06982696.1| ribosomal protein S18 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275610|gb|EFI17161.1| ribosomal protein S18 [Bacteroidetes oral taxon 274 str. F0058]
Length = 93
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K C G IDYKD L +FL+++GKI+P RI+ S K QR++A+A+KRAR+L
Sbjct: 23 NRKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRKVAQAVKRARHL 82
Query: 76 GLIAYVN 82
L+ YV
Sbjct: 83 ALLPYVT 89
>gi|261414896|ref|YP_003248579.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371352|gb|ACX74097.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326241|gb|ADL25442.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 83
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K+C + IDYKD + L RF+S+RGKI+P RIS S K QR L +AIKRAR +
Sbjct: 14 RKKTCWFTENNVKFIDYKDEKTLRRFISERGKIIPRRISGTSAKYQRMLNEAIKRARQMA 73
Query: 77 LIAYVN 82
++ +V+
Sbjct: 74 ILPFVS 79
>gi|52082634|ref|YP_081425.1| 30S ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|52788033|ref|YP_093862.1| 30S ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|319648500|ref|ZP_08002716.1| 30S ribosomal protein S18 [Bacillus sp. BT1B_CT2]
gi|81690794|sp|Q65CP5|RS18_BACLD RecName: Full=30S ribosomal protein S18
gi|52005845|gb|AAU25787.1| ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|52350535|gb|AAU43169.1| RpsR [Bacillus licheniformis ATCC 14580]
gi|317389579|gb|EFV70390.1| 30S ribosomal protein S18 [Bacillus sp. BT1B_CT2]
Length = 79
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 16 CYFTSNGITHIDYKDVDLLRKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 75
Query: 81 V 81
V
Sbjct: 76 V 76
>gi|467373|dbj|BAA05219.1| ribosomal protein S18 [Bacillus subtilis]
Length = 81
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 18 CYFTSNGITHIDYKDVDLLKKFVSERGKILPRRVTGTNAKYQRKLTAAIKRARQMALLPY 77
Query: 81 VN 82
V+
Sbjct: 78 VS 79
>gi|89100929|ref|ZP_01173776.1| ribosomal protein S18 [Bacillus sp. NRRL B-14911]
gi|89084338|gb|EAR63492.1| ribosomal protein S18 [Bacillus sp. NRRL B-14911]
Length = 81
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 18 CYFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTNAKYQRKLTVAIKRARIMALLPY 77
Query: 81 VN 82
V+
Sbjct: 78 VS 79
>gi|158337925|ref|YP_001519101.1| 30S ribosomal protein S18 [Acaryochloris marina MBIC11017]
gi|189029665|sp|B0C2J3|RS18_ACAM1 RecName: Full=30S ribosomal protein S18
gi|158308166|gb|ABW29783.1| 30S ribosomal protein S18 [Acaryochloris marina MBIC11017]
Length = 71
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL RF+++RGKI+P RI+ ++ ++QR+L +AIK+AR L
Sbjct: 4 YRRRVSPIK-PGDP-IDYKDVDLLRRFITERGKILPRRITGLTARQQRDLTRAIKQARVL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFIN 68
>gi|149907734|ref|ZP_01896481.1| 30S ribosomal protein S18 [Moritella sp. PE36]
gi|149809404|gb|EDM69333.1| 30S ribosomal protein S18 [Moritella sp. PE36]
Length = 75
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ +G IDYKDI L ++++ GKIVPSRI+ K QR+L +AIKRARYL L+ Y +L
Sbjct: 14 TSEGVTEIDYKDIATLKNYVTESGKIVPSRITGTRAKYQRQLGRAIKRARYLSLLPYTDL 73
>gi|332995432|gb|AEF05487.1| 30S ribosomal protein S18 [Alteromonas sp. SN2]
Length = 75
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ G IDYKDI L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 TADGVTEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLSSAIKRARFLALLPYTD 72
>gi|206895301|ref|YP_002246973.1| ribosomal protein S18 [Coprothermobacter proteolyticus DSM 5265]
gi|229559979|sp|B5Y876|RS18_COPPD RecName: Full=30S ribosomal protein S18
gi|206737918|gb|ACI16996.1| ribosomal protein S18 [Coprothermobacter proteolyticus DSM 5265]
Length = 74
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CPL G +DYKD+ L RF S RGKI+P R++ V QR L++AIKRAR + L+
Sbjct: 10 KLCPLCADGVREVDYKDVNRLRRFTSDRGKILPRRVTGVCAFHQRSLSRAIKRAREMALL 69
Query: 79 AYV 81
YV
Sbjct: 70 PYV 72
>gi|205371930|ref|ZP_03224750.1| 30S ribosomal protein S18 [Bacillus coahuilensis m4-4]
Length = 79
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 16 CYFTSNNITNIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTTAIKRARMMALLPY 75
Query: 81 VN 82
V
Sbjct: 76 VT 77
>gi|293375552|ref|ZP_06621826.1| ribosomal protein S18 [Turicibacter sanguinis PC909]
gi|325845115|ref|ZP_08168426.1| ribosomal protein S18 [Turicibacter sp. HGF1]
gi|292645769|gb|EFF63805.1| ribosomal protein S18 [Turicibacter sanguinis PC909]
gi|325488857|gb|EGC91255.1| ribosomal protein S18 [Turicibacter sp. HGF1]
Length = 77
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + +IDYKD+ LL RF+S RGKI+P R++ S K QREL AIKRAR++ L+
Sbjct: 13 KVCYFTTNKITKIDYKDVDLLKRFVSDRGKILPRRVTGTSAKYQRELTVAIKRARHMALL 72
Query: 79 AY 80
+
Sbjct: 73 PF 74
>gi|15600127|ref|NP_253621.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PAO1]
gi|107104033|ref|ZP_01367951.1| hypothetical protein PaerPA_01005106 [Pseudomonas aeruginosa
PACS2]
gi|116053083|ref|YP_793402.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152988792|ref|YP_001350982.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PA7]
gi|218894029|ref|YP_002442898.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa LESB58]
gi|254238351|ref|ZP_04931674.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa C3719]
gi|254244175|ref|ZP_04937497.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 2192]
gi|296391774|ref|ZP_06881249.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PAb1]
gi|313109936|ref|ZP_07795864.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 39016]
gi|20978739|sp|Q9HUN0|RS18_PSEAE RecName: Full=30S ribosomal protein S18
gi|122256904|sp|Q02F84|RS18_PSEAB RecName: Full=30S ribosomal protein S18
gi|166220975|sp|A6VD47|RS18_PSEA7 RecName: Full=30S ribosomal protein S18
gi|226735123|sp|B7V1Z7|RS18_PSEA8 RecName: Full=30S ribosomal protein S18
gi|9951213|gb|AAG08319.1|AE004906_7 30S ribosomal protein S18 [Pseudomonas aeruginosa PAO1]
gi|115588304|gb|ABJ14319.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170282|gb|EAZ55793.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa C3719]
gi|126197553|gb|EAZ61616.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 2192]
gi|150963950|gb|ABR85975.1| ribosomal protein S18 [Pseudomonas aeruginosa PA7]
gi|218774257|emb|CAW30074.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa LESB58]
gi|310882366|gb|EFQ40960.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 39016]
Length = 76
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLKAYVSETGKIVPSRITGTKAKYQRQLATAIKRARYLALLPYTD 72
>gi|295425406|ref|ZP_06818104.1| 30S ribosomal protein S18 [Lactobacillus amylolyticus DSM 11664]
gi|295064908|gb|EFG55818.1| 30S ribosomal protein S18 [Lactobacillus amylolyticus DSM 11664]
Length = 77
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL RF+S+RGKI+P R++ S K QR++AKAIKRAR +GL+ +V
Sbjct: 24 VDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVAKAIKRARIMGLLPFV 74
>gi|163790927|ref|ZP_02185350.1| 30S ribosomal protein S18 [Carnobacterium sp. AT7]
gi|159873769|gb|EDP67850.1| 30S ribosomal protein S18 [Carnobacterium sp. AT7]
Length = 79
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK + +DYKD+ LL RF+S+RG+I+P R++ K QR+L KAIK
Sbjct: 5 RRGGKKRRKVDFFAANHIEHVDYKDVDLLKRFISERGRILPRRVTGTYAKNQRKLTKAIK 64
Query: 71 RARYLGLIAYVN 82
RAR +GL+ +V
Sbjct: 65 RARIMGLLPFVT 76
>gi|89898004|ref|YP_515114.1| 30S ribosomal protein S18 [Chlamydophila felis Fe/C-56]
gi|329943157|ref|ZP_08291931.1| ribosomal protein S18 [Chlamydophila psittaci Cal10]
gi|332287739|ref|YP_004422640.1| 30S ribosomal protein S18 [Chlamydophila psittaci 6BC]
gi|123763226|sp|Q255R9|RS18_CHLFF RecName: Full=30S ribosomal protein S18
gi|89331376|dbj|BAE80969.1| 30S ribosomal protein S18 [Chlamydophila felis Fe/C-56]
gi|313848310|emb|CBY17313.1| 30S ribosomal protein S18 [Chlamydophila psittaci RD1]
gi|325507290|gb|ADZ18928.1| 30S ribosomal protein S18 [Chlamydophila psittaci 6BC]
gi|328814704|gb|EGF84694.1| ribosomal protein S18 [Chlamydophila psittaci Cal10]
gi|328914993|gb|AEB55826.1| ribosomal protein S18 [Chlamydophila psittaci 6BC]
Length = 82
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 13 NVSHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
N HRRK CP G IDYKD L +F+++RGKI+P RI+ VS + Q L A
Sbjct: 7 NNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITERGKILPRRITGVSSRFQGILTLA 66
Query: 69 IKRARYLGLIAYV 81
IKRAR++G + +V
Sbjct: 67 IKRARHIGFLPFV 79
>gi|74318121|ref|YP_315861.1| 30S ribosomal protein S18 [Thiobacillus denitrificans ATCC 25259]
gi|74057616|gb|AAZ98056.1| ribosomal protein S18 [Thiobacillus denitrificans ATCC 25259]
Length = 95
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKD+ +L F+++ G+I+P+RI+ QR+L AIKR
Sbjct: 23 RGLFKRRKFCRFTAEKVVEVDYKDVDVLKEFIAENGRIIPARITGTKAHYQRQLGTAIKR 82
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 83 ARFLALMPYTDL 94
>gi|50812313|ref|NP_391969.2| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312071|ref|ZP_03593918.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|221316396|ref|ZP_03598201.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221321309|ref|ZP_03602603.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221325592|ref|ZP_03606886.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|296330018|ref|ZP_06872502.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676742|ref|YP_003868414.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|321313649|ref|YP_004205936.1| 30S ribosomal protein S18 [Bacillus subtilis BSn5]
gi|585940|sp|P21475|RS18_BACSU RecName: Full=30S ribosomal protein S18; AltName: Full=BS21
gi|32468848|emb|CAB16126.2| ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|296153057|gb|EFG93922.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414986|gb|ADM40105.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|320019923|gb|ADV94909.1| 30S ribosomal protein S18 [Bacillus subtilis BSn5]
Length = 79
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 16 CYFTSNGITHIDYKDVDLLKKFVSERGKILPRRVTGTNAKYQRKLTAAIKRARQMALLPY 75
Query: 81 VN 82
V+
Sbjct: 76 VS 77
>gi|205620144|sp|Q3SH33|RS18_THIDA RecName: Full=30S ribosomal protein S18
Length = 91
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKD+ +L F+++ G+I+P+RI+ QR+L AIKR
Sbjct: 19 RGLFKRRKFCRFTAEKVVEVDYKDVDVLKEFIAENGRIIPARITGTKAHYQRQLGTAIKR 78
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 79 ARFLALMPYTDL 90
>gi|282882898|ref|ZP_06291503.1| ribosomal protein S18 [Peptoniphilus lacrimalis 315-B]
gi|300813419|ref|ZP_07093767.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297309|gb|EFA89800.1| ribosomal protein S18 [Peptoniphilus lacrimalis 315-B]
gi|300512469|gb|EFK39621.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 74
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R + R+K P +IDYKD+ +L ++S+RGKI+P RI+ ++ K QRE+ AI
Sbjct: 1 MQRRFTRRKKVDPFEKDKTKKIDYKDVDMLRNYISERGKILPRRITGLNAKHQREMTVAI 60
Query: 70 KRARYLGLIAY 80
KRAR + LI Y
Sbjct: 61 KRARQIALIPY 71
>gi|11466410|ref|NP_038414.1| ribosomal protein S18 [Mesostigma viride]
gi|12230596|sp|Q9MUP6|RR18_MESVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|7259553|gb|AAF43854.1|AF166114_66 ribosomal protein S18 [Mesostigma viride]
Length = 71
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR++ P+ K IDYK+I LL++F++++GKI+P R++++S K+QR + KAIK+AR+L
Sbjct: 5 RRRTSPI--KPTDSIDYKNIDLLSQFITEQGKILPRRVNNISAKQQRAITKAIKQARFLT 62
Query: 77 LIAYVN 82
L+ ++N
Sbjct: 63 LLPFLN 68
>gi|260101870|ref|ZP_05752107.1| 30S ribosomal protein S18 [Lactobacillus helveticus DSM 20075]
gi|260084298|gb|EEW68418.1| 30S ribosomal protein S18 [Lactobacillus helveticus DSM 20075]
Length = 76
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +G
Sbjct: 9 RRKVDYIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMG 68
Query: 77 LIAYV 81
L+ +V
Sbjct: 69 LLPFV 73
>gi|229825620|ref|ZP_04451689.1| hypothetical protein GCWU000182_00982 [Abiotrophia defectiva ATCC
49176]
gi|229790183|gb|EEP26297.1| hypothetical protein GCWU000182_00982 [Abiotrophia defectiva ATCC
49176]
Length = 92
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + R+K C L+ + +DYKD L +F+S+RGKI+P RI+ S + QR L AIK
Sbjct: 20 RRPMHRRKKVCALTPEELDNLDYKDAAKLKKFISERGKILPRRITGTSARHQRILTTAIK 79
Query: 71 RARYLGLIAYV 81
RAR+L LI YV
Sbjct: 80 RARHLALIPYV 90
>gi|319651070|ref|ZP_08005204.1| ribosomal protein S18 [Bacillus sp. 2_A_57_CT2]
gi|317397240|gb|EFV77944.1| ribosomal protein S18 [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 16 CFFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLPY 75
Query: 81 VN 82
V+
Sbjct: 76 VS 77
>gi|254283309|ref|ZP_04958277.1| ribosomal protein S18 [gamma proteobacterium NOR51-B]
gi|219679512|gb|EED35861.1| ribosomal protein S18 [gamma proteobacterium NOR51-B]
Length = 75
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L +++++ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLETLKQYVTETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYSD 72
>gi|172038260|ref|YP_001804761.1| 30S ribosomal protein S18 [Cyanothece sp. ATCC 51142]
gi|171699714|gb|ACB52695.1| 30S ribosomal protein S18 [Cyanothece sp. ATCC 51142]
Length = 71
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+L
Sbjct: 4 YRKRLSPIPPKQP--IDYKDTELLRKFITERGKILPRRITGLTAKQQRALTSAVKRARFL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|126660661|ref|ZP_01731762.1| 30S ribosomal protein S18 [Cyanothece sp. CCY0110]
gi|126618054|gb|EAZ88822.1| 30S ribosomal protein S18 [Cyanothece sp. CCY0110]
Length = 71
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+L
Sbjct: 4 YRKRLSPIPPKQP--IDYKDTELLRKFITERGKILPRRITGLTAKQQRALTAAVKRARFL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens
NRL30031/H210]
gi|241760281|ref|ZP_04758376.1| ribosomal protein S18 [Neisseria flavescens SK114]
gi|261365214|ref|ZP_05978097.1| ribosomal protein S18 [Neisseria mucosa ATCC 25996]
gi|261379686|ref|ZP_05984259.1| ribosomal protein S18 [Neisseria subflava NJ9703]
gi|298368603|ref|ZP_06979921.1| ribosomal protein S18 [Neisseria sp. oral taxon 014 str. F0314]
gi|319637637|ref|ZP_07992403.1| 30S ribosomal protein S18 [Neisseria mucosa C102]
gi|224953622|gb|EEG34831.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens
NRL30031/H210]
gi|241319159|gb|EER55637.1| ribosomal protein S18 [Neisseria flavescens SK114]
gi|284797348|gb|EFC52695.1| ribosomal protein S18 [Neisseria subflava NJ9703]
gi|288566476|gb|EFC88036.1| ribosomal protein S18 [Neisseria mucosa ATCC 25996]
gi|298282606|gb|EFI24093.1| ribosomal protein S18 [Neisseria sp. oral taxon 014 str. F0314]
gi|317400792|gb|EFV81447.1| 30S ribosomal protein S18 [Neisseria mucosa C102]
Length = 76
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+S+ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|49082502|gb|AAT50651.1| PA4934 [synthetic construct]
Length = 77
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLRAYVSETGKIVPSRITGTKAKYQRQLATAIKRARYLALLPYTD 72
>gi|83644550|ref|YP_432985.1| ribosomal protein S18 [Hahella chejuensis KCTC 2396]
gi|123739986|sp|Q2SLB4|RS18_HAHCH RecName: Full=30S ribosomal protein S18
gi|83632593|gb|ABC28560.1| ribosomal protein S18 [Hahella chejuensis KCTC 2396]
Length = 76
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ +L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDVEVLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|297538624|ref|YP_003674393.1| 30S ribosomal protein S18 [Methylotenera sp. 301]
gi|297257971|gb|ADI29816.1| ribosomal protein S18 [Methylotenera sp. 301]
Length = 76
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RR+ C S +G +DYKD+ LL F+S+ KI+P+R++ + QR+L A+
Sbjct: 1 MAREMYKRRRYCRFSAEGIKEVDYKDVDLLKDFISENAKIIPARMTGTKARYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
K AR+L L+ Y +
Sbjct: 61 KLARFLALLPYTD 73
>gi|114332337|ref|YP_748559.1| 30S ribosomal protein S18 [Nitrosomonas eutropha C91]
gi|114309351|gb|ABI60594.1| SSU ribosomal protein S18P [Nitrosomonas eutropha C91]
Length = 92
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A PL +R +K C + +G +IDYKD+ LL F+S+ G+I+P+RI+ QR
Sbjct: 17 MANRPLFKR-----KKFCRFTAEGIKKIDYKDVDLLKDFISENGRIIPARITGTRSYYQR 71
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AI+RAR+L L+ Y +
Sbjct: 72 QLNLAIERARFLALLPYTD 90
>gi|309390332|gb|ADO78212.1| SSU ribosomal protein S18P [Halanaerobium praevalens DSM 2228]
Length = 71
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R KSC +IDYKD+R LNR+L+ RGKI+P R++ K Q+ + KA+KRAR +
Sbjct: 5 RNKSCHFCANENKKIDYKDLRTLNRYLTDRGKIMPRRVTGNCSKHQKLITKAVKRARSVA 64
Query: 77 LIAYV 81
L+ YV
Sbjct: 65 LLPYV 69
>gi|205562195|sp|Q0ADI8|RS18_NITEC RecName: Full=30S ribosomal protein S18
Length = 76
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + R+K C + +G +IDYKD+ LL F+S+ G+I+P+RI+ QR+L AI+R
Sbjct: 4 RPLFKRKKFCRFTAEGIKKIDYKDVDLLKDFISENGRIIPARITGTRSYYQRQLNLAIER 63
Query: 72 ARYLGLIAYVN 82
AR+L L+ Y +
Sbjct: 64 ARFLALLPYTD 74
>gi|315652548|ref|ZP_07905530.1| 30S ribosomal protein S18 [Eubacterium saburreum DSM 3986]
gi|315485191|gb|EFU75591.1| 30S ribosomal protein S18 [Eubacterium saburreum DSM 3986]
Length = 89
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P LRR R+K C G+ IDYKD+ L +++S+RGKI+P RIS K QRE+
Sbjct: 16 PANGLRR----RKKVCAFCGEKEKAIDYKDVATLRKYISERGKILPRRISGSCAKHQREI 71
Query: 66 AKAIKRARYLGLIAYV 81
AIK+AR++ L+ YV
Sbjct: 72 TVAIKKARHIALLPYV 87
>gi|302669612|ref|YP_003829572.1| ribosomal protein S18 RpsR [Butyrivibrio proteoclasticus B316]
gi|302394085|gb|ADL32990.1| ribosomal protein S18 RpsR [Butyrivibrio proteoclasticus B316]
Length = 87
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKS-CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
++ + P+ R+ HRRK C GK IDYKD L +F+S+ GKI+P RI+ K
Sbjct: 6 SDKSDAPMRRKGGMHRRKKVCVFCGKDNV-IDYKDTAKLKKFVSESGKILPRRITGNCAK 64
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QREL A+KRAR+L L+ YV
Sbjct: 65 HQRELTSAVKRARHLALMPYV 85
>gi|282901219|ref|ZP_06309148.1| Ribosomal protein S18 [Cylindrospermopsis raciborskii CS-505]
gi|281193919|gb|EFA68887.1| Ribosomal protein S18 [Cylindrospermopsis raciborskii CS-505]
Length = 71
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+L AIKRAR L
Sbjct: 4 YRRRLSPIK-PGEP-IDYKDVELLRKFMTERGKILPRRITGLTSQQQRQLTLAIKRARIL 61
Query: 76 GLIAYVN 82
++ ++N
Sbjct: 62 AMLPFIN 68
>gi|166367546|ref|YP_001659819.1| 30S ribosomal protein S18 [Microcystis aeruginosa NIES-843]
gi|189029681|sp|B0JVN4|RS18_MICAN RecName: Full=30S ribosomal protein S18
gi|166089919|dbj|BAG04627.1| 30S ribosomal protein S18 [Microcystis aeruginosa NIES-843]
Length = 71
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+S IDYKD LL +F+++RGKI+P RI+ ++ K+QR+L +A+KRAR +
Sbjct: 4 YRKRLSPISPSQP--IDYKDTELLRKFITERGKILPRRITGLTSKQQRDLTEAVKRARLM 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|238021237|ref|ZP_04601663.1| hypothetical protein GCWU000324_01135 [Kingella oralis ATCC
51147]
gi|294669620|ref|ZP_06734687.1| hypothetical protein NEIELOOT_01521 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|294788326|ref|ZP_06753569.1| ribosomal protein S18 [Simonsiella muelleri ATCC 29453]
gi|325265837|ref|ZP_08132523.1| 50S ribosomal protein L21 [Kingella denitrificans ATCC 33394]
gi|329119366|ref|ZP_08248052.1| 50S ribosomal protein L21 [Neisseria bacilliformis ATCC BAA-1200]
gi|237868217|gb|EEP69223.1| hypothetical protein GCWU000324_01135 [Kingella oralis ATCC
51147]
gi|291308533|gb|EFE49776.1| hypothetical protein NEIELOOT_01521 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|294483757|gb|EFG31441.1| ribosomal protein S18 [Simonsiella muelleri ATCC 29453]
gi|324982475|gb|EGC18101.1| 50S ribosomal protein L21 [Kingella denitrificans ATCC 33394]
gi|327464511|gb|EGF10810.1| 50S ribosomal protein L21 [Neisseria bacilliformis ATCC BAA-1200]
gi|332970412|gb|EGK09404.1| 50S ribosomal protein L21 [Kingella kingae ATCC 23330]
Length = 76
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+++ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQTFKRRKFCRFTAEKIQEVDYKQVDLLKDFITENGKIIPARITGTKAHYQRQLAVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|154688193|ref|YP_001423354.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens FZB42]
gi|308175795|ref|YP_003922500.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens DSM 7]
gi|154354044|gb|ABS76123.1| RpsR [Bacillus amyloliquefaciens FZB42]
gi|307608659|emb|CBI45030.1| ribosomal protein S18 [Bacillus amyloliquefaciens DSM 7]
Length = 81
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 18 CYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLPY 77
Query: 81 VN 82
V
Sbjct: 78 VT 79
>gi|300869626|ref|ZP_07114206.1| 30S ribosomal protein S18 [Oscillatoria sp. PCC 6506]
gi|300332404|emb|CBN59406.1| 30S ribosomal protein S18 [Oscillatoria sp. PCC 6506]
Length = 71
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ K+QR+L IKRAR L
Sbjct: 4 FRRRVSPIK-PGDP-IDYKDVDLLRKFVTERGKILPRRITGLTAKQQRDLTTGIKRARIL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALMPFVN 68
>gi|300311392|ref|YP_003775484.1| 30S ribosomal protein S18 [Herbaspirillum seropedicae SmR1]
gi|300074177|gb|ADJ63576.1| 30S ribosomal subunit S18 protein [Herbaspirillum seropedicae
SmR1]
Length = 94
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G ++DYKD+ L F+ + GKI+P+R++ QR++ AIKRARYL
Sbjct: 25 RKKFCRFTAAGVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAHYQRQVDTAIKRARYLA 84
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 85 LLPYTDL 91
>gi|162447065|ref|YP_001620197.1| 30S ribosomal protein S18 [Acholeplasma laidlawii PG-8A]
gi|205556720|sp|A9NEP1|RS18_ACHLI RecName: Full=30S ribosomal protein S18
gi|161985172|gb|ABX80821.1| small subunit ribosomal protein S18 [Acholeplasma laidlawii
PG-8A]
Length = 80
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + ID+KD LL RF+++RGKI+P R++ S K QR LA AIKRAR++
Sbjct: 14 RKKVCFFTQNKFTHIDFKDTELLKRFITERGKILPRRVTGTSAKWQRPLAVAIKRARHMA 73
Query: 77 LIAYV 81
L+ +V
Sbjct: 74 LLPFV 78
>gi|298493170|ref|YP_003723347.1| 30S ribosomal protein S18 ['Nostoc azollae' 0708]
gi|298235088|gb|ADI66224.1| ribosomal protein S18 ['Nostoc azollae' 0708]
Length = 71
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ ++QREL AIKRAR +
Sbjct: 4 YRRRLSPIK-PGEP-IDYKDVDLLRKFITERGKILPRRITGLTSQQQRELTLAIKRARIV 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFIN 68
>gi|146328891|ref|YP_001210004.1| 30S ribosomal protein S18 [Dichelobacter nodosus VCS1703A]
gi|205557281|sp|A5EXN0|RS18_DICNV RecName: Full=30S ribosomal protein S18
gi|146232361|gb|ABQ13339.1| 30S ribosomal protein S18 [Dichelobacter nodosus VCS1703A]
Length = 71
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ R++ C + +G IDYKD+ L ++++ GKIVP+RI+ + QR+LA A+KRAR
Sbjct: 1 MARRKRICRFTAEGVKEIDYKDLETLKAYITEVGKIVPARITGTNVFYQRQLATAVKRAR 60
Query: 74 YLGLIAYVN 82
+L L+ Y +
Sbjct: 61 FLALLPYTD 69
>gi|119488089|ref|ZP_01621533.1| 30S ribosomal protein S18 [Lyngbya sp. PCC 8106]
gi|119455378|gb|EAW36517.1| 30S ribosomal protein S18 [Lyngbya sp. PCC 8106]
Length = 71
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ K IDYK+I LL +F+++RGKI+P RI+ ++ K+QR+L KAIK+AR L
Sbjct: 4 FRRQVSPIDPKTP--IDYKNIELLRKFVTERGKILPRRITGLTCKQQRDLTKAIKQARIL 61
Query: 76 GLIAYVN 82
++ +VN
Sbjct: 62 AMLPFVN 68
>gi|86609095|ref|YP_477857.1| 30S ribosomal protein S18 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123724452|sp|Q2JL28|RS18_SYNJB RecName: Full=30S ribosomal protein S18
gi|86557637|gb|ABD02594.1| ribosomal protein S18 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 71
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
V RR+ P+ G P I Y D+ LL +F+++RGKI+P RI+ ++ K+QREL AIKRAR
Sbjct: 2 VYARRRLSPIK-PGEP-IRYTDVELLKKFVTERGKILPRRITGLTAKQQRELTAAIKRAR 59
Query: 74 YLGLIAYVN 82
+GL+ +VN
Sbjct: 60 IMGLLYFVN 68
>gi|295099557|emb|CBK88646.1| SSU ribosomal protein S18P [Eubacterium cylindroides T2-87]
Length = 76
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF++ GKI+P R++ K QR LAKAIKRAR +
Sbjct: 10 RKKVCYFTKNKIKEIDYKDVELLKRFINANGKIIPRRVTGTRAKYQRMLAKAIKRARQMA 69
Query: 77 LIAYV 81
L+ YV
Sbjct: 70 LLPYV 74
>gi|146283969|ref|YP_001174122.1| 30S ribosomal protein S18 [Pseudomonas stutzeri A1501]
gi|166220978|sp|A4VQM9|RS18_PSEU5 RecName: Full=30S ribosomal protein S18
gi|145572174|gb|ABP81280.1| 30S ribosomal protein S18 [Pseudomonas stutzeri A1501]
gi|327482297|gb|AEA85607.1| 30S ribosomal protein S18 [Pseudomonas stutzeri DSM 4166]
Length = 76
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|323487706|ref|ZP_08092964.1| ribosomal protein S18 [Planococcus donghaensis MPA1U2]
gi|323398440|gb|EGA91228.1| ribosomal protein S18 [Planococcus donghaensis MPA1U2]
Length = 78
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R+K C + IDYKD LL +F+S+RGKI+P R++ S K QR+L AIK
Sbjct: 4 RRGGKKRKKVCYFTSNNITHIDYKDTDLLKKFISERGKILPRRVTGTSAKWQRKLTIAIK 63
Query: 71 RARYLGLIAYV 81
R+R + L+ +V
Sbjct: 64 RSRIMALLPFV 74
>gi|240144659|ref|ZP_04743260.1| ribosomal protein S18 [Roseburia intestinalis L1-82]
gi|257203299|gb|EEV01584.1| ribosomal protein S18 [Roseburia intestinalis L1-82]
gi|291537110|emb|CBL10222.1| SSU ribosomal protein S18P [Roseburia intestinalis M50/1]
gi|291540345|emb|CBL13456.1| SSU ribosomal protein S18P [Roseburia intestinalis XB6B4]
Length = 87
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A+ P+ RR + R+K C GK IDYKD L R++S+RGKI+P RI+ K
Sbjct: 7 ADKDGAPMKRRPMHRRKKVCVFCGKDNV-IDYKDTNKLKRYISERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ YV
Sbjct: 66 QRALTVAIKRARHVALMPYV 85
>gi|332685544|ref|YP_004455318.1| 30S ribosomal protein S18p [Melissococcus plutonius ATCC 35311]
gi|332369553|dbj|BAK20509.1| SSU ribosomal protein S18p [Melissococcus plutonius ATCC 35311]
Length = 79
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V+
Sbjct: 25 IDYKDIELLKRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLPFVS 76
>gi|227508138|ref|ZP_03938187.1| 30S ribosomal protein S18 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227511162|ref|ZP_03941211.1| 30S ribosomal protein S18 [Lactobacillus buchneri ATCC 11577]
gi|227523349|ref|ZP_03953398.1| 30S ribosomal protein S18 [Lactobacillus hilgardii ATCC 8290]
gi|227085644|gb|EEI20956.1| 30S ribosomal protein S18 [Lactobacillus buchneri ATCC 11577]
gi|227089455|gb|EEI24767.1| 30S ribosomal protein S18 [Lactobacillus hilgardii ATCC 8290]
gi|227192367|gb|EEI72434.1| 30S ribosomal protein S18 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 78
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+++V
Sbjct: 25 IDYKDVDLLKRFVSERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLMSFV 75
>gi|205562353|sp|A7ZAU7|RS18_BACA2 RecName: Full=30S ribosomal protein S18
gi|328555771|gb|AEB26263.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens TA208]
Length = 79
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+ Y
Sbjct: 16 CYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLPY 75
Query: 81 VN 82
V
Sbjct: 76 VT 77
>gi|229542337|ref|ZP_04431397.1| ribosomal protein S18 [Bacillus coagulans 36D1]
gi|229326757|gb|EEN92432.1| ribosomal protein S18 [Bacillus coagulans 36D1]
Length = 79
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 15 CYFTANHITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTTAIKRARQMALLPY 74
Query: 81 V 81
V
Sbjct: 75 V 75
>gi|313900367|ref|ZP_07833861.1| ribosomal protein S18 [Clostridium sp. HGF2]
gi|312954916|gb|EFR36590.1| ribosomal protein S18 [Clostridium sp. HGF2]
Length = 76
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKDI LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNKIESIDYKDIELLKRFISANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 70 LLPYVS 75
>gi|138897054|ref|YP_001127507.1| 30S ribosomal protein S18 [Geobacillus thermodenitrificans
NG80-2]
gi|134268567|gb|ABO68762.1| Ribosomal protein S18 [Geobacillus thermodenitrificans NG80-2]
Length = 91
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 28 CYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 87
Query: 81 V 81
V
Sbjct: 88 V 88
>gi|17231943|ref|NP_488491.1| 30S ribosomal protein S18 [Nostoc sp. PCC 7120]
gi|75907544|ref|YP_321840.1| 30S ribosomal protein S18 [Anabaena variabilis ATCC 29413]
gi|20978694|sp|Q8YNW0|RS18_ANASP RecName: Full=30S ribosomal protein S18
gi|123731561|sp|Q3MDJ1|RS18_ANAVT RecName: Full=30S ribosomal protein S18
gi|17133587|dbj|BAB76150.1| 30S ribosomal protein S18 [Nostoc sp. PCC 7120]
gi|75701269|gb|ABA20945.1| SSU ribosomal protein S18P [Anabaena variabilis ATCC 29413]
Length = 71
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ K+QREL AIKR+R +
Sbjct: 4 YRRRLSPIK-PGEP-IDYKDVDLLRKFITERGKILPRRITGLTAKQQRELTLAIKRSRLV 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFIN 68
>gi|229917472|ref|YP_002886118.1| ribosomal protein S18 [Exiguobacterium sp. AT1b]
gi|229468901|gb|ACQ70673.1| ribosomal protein S18 [Exiguobacterium sp. AT1b]
Length = 76
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKR+R + L+
Sbjct: 12 KVCFFTSNNITHIDYKDVELLKRFVSERGKILPRRVTGTSAKYQRPLTVAIKRSRQMALL 71
Query: 79 AYV 81
YV
Sbjct: 72 PYV 74
>gi|158520026|ref|YP_001527896.1| ribosomal protein S18 [Desulfococcus oleovorans Hxd3]
gi|205557251|sp|A8ZRQ2|RS18_DESOH RecName: Full=30S ribosomal protein S18
gi|158508852|gb|ABW65819.1| ribosomal protein S18 [Desulfococcus oleovorans Hxd3]
Length = 83
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P+P ++ V HRRK C + IDYK+ + L F+++RGKI+P RIS K QR +
Sbjct: 3 PSPRGKKRVFHRRKYCRFCADSSLPIDYKNPKSLKSFITERGKIIPRRISGTCAKHQRAI 62
Query: 66 AKAIKRARYLGLIAYV 81
+ IKRAR + L+ YV
Sbjct: 63 TREIKRARTIALLPYV 78
>gi|62185391|ref|YP_220176.1| 30S ribosomal protein S18 [Chlamydophila abortus S26/3]
gi|81312459|sp|Q5L566|RS18_CHLAB RecName: Full=30S ribosomal protein S18
gi|62148458|emb|CAH64228.1| 30S ribosomal protein S18 [Chlamydophila abortus S26/3]
Length = 87
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 13 NVSHRRK----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
N HRRK CP G IDYKD L +F++++GKI+P RI+ VS + Q L A
Sbjct: 12 NNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITEKGKILPRRITGVSSRFQGILTLA 71
Query: 69 IKRARYLGLIAYV 81
IKRAR++G + +V
Sbjct: 72 IKRARHIGFLPFV 84
>gi|59798883|sp|Q82XQ8|RS18_NITEU RecName: Full=30S ribosomal protein S18
Length = 76
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +G IDYKDI LL F+S+ G+I+P+RI+ QR+L AI+RAR+L
Sbjct: 9 RKKFCRFTAEGIKHIDYKDIDLLKDFVSENGRIIPARITGTRAYYQRQLNLAIERARFLA 68
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 69 LLPYTD 74
>gi|56422015|ref|YP_149333.1| 30S ribosomal protein S18 [Geobacillus kaustophilus HTA426]
gi|196249872|ref|ZP_03148568.1| ribosomal protein S18 [Geobacillus sp. G11MC16]
gi|261420889|ref|YP_003254571.1| 30S ribosomal protein S18 [Geobacillus sp. Y412MC61]
gi|297531674|ref|YP_003672949.1| ribosomal protein S18 [Geobacillus sp. C56-T3]
gi|319768560|ref|YP_004134061.1| ribosomal protein S18 [Geobacillus sp. Y412MC52]
gi|585939|sp|P10806|RS18_BACST RecName: Full=30S ribosomal protein S18; AltName: Full=BS19;
AltName: Full=BS21
gi|81675665|sp|Q5KU71|RS18_GEOKA RecName: Full=30S ribosomal protein S18
gi|205562283|sp|A4ITV8|RS18_GEOTN RecName: Full=30S ribosomal protein S18
gi|56381857|dbj|BAD77765.1| 30S ribosomal protein S18 (BS21) [Geobacillus kaustophilus
HTA426]
gi|196210748|gb|EDY05511.1| ribosomal protein S18 [Geobacillus sp. G11MC16]
gi|261377346|gb|ACX80089.1| ribosomal protein S18 [Geobacillus sp. Y412MC61]
gi|297254926|gb|ADI28372.1| ribosomal protein S18 [Geobacillus sp. C56-T3]
gi|317113426|gb|ADU95918.1| ribosomal protein S18 [Geobacillus sp. Y412MC52]
Length = 78
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 15 CYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 74
Query: 81 V 81
V
Sbjct: 75 V 75
>gi|28376983|ref|NP_783875.1| 30S ribosomal protein S18 [Lactobacillus plantarum WCFS1]
gi|254555178|ref|YP_003061595.1| 30S ribosomal protein S18 [Lactobacillus plantarum JDM1]
gi|300769114|ref|ZP_07079003.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179200|ref|YP_003923328.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258549|sp|Q890K0|RS18_LACPL RecName: Full=30S ribosomal protein S18
gi|28269814|emb|CAD62711.1| ribosomal protein S18 [Lactobacillus plantarum WCFS1]
gi|254044105|gb|ACT60898.1| 30S ribosomal protein S18 [Lactobacillus plantarum JDM1]
gi|300493354|gb|EFK28533.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308044691|gb|ADN97234.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 78
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+A+V+
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRSLTIAIKRARIMGLLAFVS 76
>gi|206901836|ref|YP_002251075.1| ribosomal protein S18 [Dictyoglomus thermophilum H-6-12]
gi|254765427|sp|B5YEW7|RS18_DICT6 RecName: Full=30S ribosomal protein S18
gi|206740939|gb|ACI19997.1| ribosomal protein S18 [Dictyoglomus thermophilum H-6-12]
Length = 84
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E T + S ++K C + IDYK++ L RF++++GKI+P RIS + Q
Sbjct: 4 EKTSTKAPKFTYSSKKKFCVFCSEKIDYIDYKNVERLKRFMTEKGKIIPRRISGNCARHQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R+L+ AIKRARY+ L+ YV
Sbjct: 64 RQLSTAIKRARYMALLPYV 82
>gi|30248220|ref|NP_840290.1| 30S ribosomal protein S18 [Nitrosomonas europaea ATCC 19718]
gi|30180105|emb|CAD84107.1| Ribosomal protein S18 [Nitrosomonas europaea ATCC 19718]
Length = 92
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A PL +R +K C + +G IDYKDI LL F+S+ G+I+P+RI+ QR
Sbjct: 17 MANRPLFKR-----KKFCRFTAEGIKHIDYKDIDLLKDFVSENGRIIPARITGTRAYYQR 71
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AI+RAR+L L+ Y +
Sbjct: 72 QLNLAIERARFLALLPYTD 90
>gi|89075972|ref|ZP_01162344.1| 30S ribosomal protein S18 [Photobacterium sp. SKA34]
gi|90581364|ref|ZP_01237160.1| 30S ribosomal protein S18 [Vibrio angustum S14]
gi|262275142|ref|ZP_06052953.1| SSU ribosomal protein S18p [Grimontia hollisae CIP 101886]
gi|269103597|ref|ZP_06156294.1| SSU ribosomal protein S18p [Photobacterium damselae subsp.
damselae CIP 102761]
gi|330445015|ref|ZP_08308669.1| ribosomal protein S18 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|89048321|gb|EAR53900.1| 30S ribosomal protein S18 [Photobacterium sp. SKA34]
gi|90437474|gb|EAS62669.1| 30S ribosomal protein S18 [Vibrio angustum S14]
gi|262221705|gb|EEY73019.1| SSU ribosomal protein S18p [Grimontia hollisae CIP 101886]
gi|268163495|gb|EEZ41991.1| SSU ribosomal protein S18p [Photobacterium damselae subsp.
damselae CIP 102761]
gi|328493133|dbj|GAA03166.1| ribosomal protein S18 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 75
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|226308|prf||1506337A ribosomal protein S18
Length = 77
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 14 CYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|300812002|ref|ZP_07092458.1| ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497028|gb|EFK32094.1| ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 78
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|160916101|ref|ZP_02078308.1| hypothetical protein EUBDOL_02128 [Eubacterium dolichum DSM 3991]
gi|158431825|gb|EDP10114.1| hypothetical protein EUBDOL_02128 [Eubacterium dolichum DSM 3991]
Length = 76
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNKIETIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 70 LLPYVS 75
>gi|59712918|ref|YP_205694.1| 30S ribosomal protein S18 [Vibrio fischeri ES114]
gi|197335451|ref|YP_002157106.1| ribosomal protein S18 [Vibrio fischeri MJ11]
gi|209696170|ref|YP_002264100.1| 30S ribosomal protein S18 [Aliivibrio salmonicida LFI1238]
gi|75506909|sp|Q5E2E0|RS18_VIBF1 RecName: Full=30S ribosomal protein S18
gi|229470510|sp|B6EMP4|RS18_ALISL RecName: Full=30S ribosomal protein S18
gi|229560080|sp|B5FBQ1|RS18_VIBFM RecName: Full=30S ribosomal protein S18
gi|59481019|gb|AAW86806.1| 30S ribosomal subunit protein S18 [Vibrio fischeri ES114]
gi|197316941|gb|ACH66388.1| ribosomal protein S18 [Vibrio fischeri MJ11]
gi|208010123|emb|CAQ80448.1| 30S ribosomal subunit protein S18 [Aliivibrio salmonicida
LFI1238]
Length = 75
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|212550375|ref|YP_002308692.1| 30S ribosomal protein S18 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548613|dbj|BAG83281.1| 30S ribosomal protein S18 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 92
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ +R+K C G IDYKD L +FL+++GKI+P RI+ S K Q +A+A+KRA
Sbjct: 19 DTKNRKKYCRFKKNGIKFIDYKDPEFLKKFLNEQGKILPRRITGTSAKFQHRVAQAVKRA 78
Query: 73 RYLGLIAYV 81
R+L L+ YV
Sbjct: 79 RHLALLPYV 87
>gi|163857367|ref|YP_001631665.1| 30S ribosomal protein S18 [Bordetella petrii DSM 12804]
gi|229559965|sp|A9IT96|RS18_BORPD RecName: Full=30S ribosomal protein S18
gi|163261095|emb|CAP43397.1| 30S ribosomal protein S18 [Bordetella petrii]
Length = 90
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 22 RRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|331003444|ref|ZP_08326943.1| hypothetical protein HMPREF0491_01805 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412490|gb|EGG91879.1| hypothetical protein HMPREF0491_01805 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 89
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P LRR R+K C G IDYKD+ L +++S+RGKI+P RIS K QRE+
Sbjct: 16 PANGLRR----RKKVCTFCGDKEKAIDYKDVATLRKYISERGKILPRRISGSCAKHQREI 71
Query: 66 AKAIKRARYLGLIAYV 81
AIK+AR++ L+ YV
Sbjct: 72 TVAIKKARHIALLPYV 87
>gi|291561870|emb|CBL40671.1| SSU ribosomal protein S18P [butyrate-producing bacterium SS3/4]
Length = 88
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKS-CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ + + +RR HRRK C G IDYKD+ L R++S+RGKI+P RI+ K
Sbjct: 6 GDKSDSSRVRRGGMHRRKKVCVFCGDKNGEIDYKDVNKLKRYVSERGKILPRRITGNCAK 65
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ Y
Sbjct: 66 HQRALTVAIKRARHIALMPYT 86
>gi|311032234|ref|ZP_07710324.1| 30S ribosomal protein S18 [Bacillus sp. m3-13]
Length = 79
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD +L +F+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 16 CYFTANGITHIDYKDTDVLKKFVSERGKILPRRVTGTSAKYQRKLTIAIKRARQMALLPY 75
Query: 81 VN 82
V+
Sbjct: 76 VS 77
>gi|148381563|ref|YP_001256104.1| ribosomal protein S18 [Clostridium botulinum A str. ATCC 3502]
gi|153932032|ref|YP_001385940.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
19397]
gi|153934477|ref|YP_001389347.1| 30S ribosomal protein S18 [Clostridium botulinum A str. Hall]
gi|153939405|ref|YP_001392982.1| 30S ribosomal protein S18 [Clostridium botulinum F str.
Langeland]
gi|168181093|ref|ZP_02615757.1| ribosomal protein S18 [Clostridium botulinum NCTC 2916]
gi|168183704|ref|ZP_02618368.1| 30S ribosomal protein S18 [Clostridium botulinum Bf]
gi|170756238|ref|YP_001783261.1| 30S ribosomal protein S18 [Clostridium botulinum B1 str. Okra]
gi|170759820|ref|YP_001788968.1| 30S ribosomal protein S18 [Clostridium botulinum A3 str. Loch
Maree]
gi|226951078|ref|YP_002806169.1| ribosomal protein S18 [Clostridium botulinum A2 str. Kyoto]
gi|237797083|ref|YP_002864635.1| 30S ribosomal protein S18 [Clostridium botulinum Ba4 str. 657]
gi|166220944|sp|A7FZG9|RS18_CLOB1 RecName: Full=30S ribosomal protein S18
gi|166220945|sp|A5I7Z9|RS18_CLOBH RecName: Full=30S ribosomal protein S18
gi|166220946|sp|A7GJM2|RS18_CLOBL RecName: Full=30S ribosomal protein S18
gi|229559977|sp|B1IHQ2|RS18_CLOBK RecName: Full=30S ribosomal protein S18
gi|229559978|sp|B1KU95|RS18_CLOBM RecName: Full=30S ribosomal protein S18
gi|254765421|sp|C1FP14|RS18_CLOBJ RecName: Full=30S ribosomal protein S18
gi|259494803|sp|C3KWH8|RS18_CLOB6 RecName: Full=30S ribosomal protein S18
gi|148291047|emb|CAL85184.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
3502]
gi|152928076|gb|ABS33576.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
19397]
gi|152930391|gb|ABS35890.1| 30S ribosomal protein S18 [Clostridium botulinum A str. Hall]
gi|152935301|gb|ABS40799.1| 30S ribosomal protein S18 [Clostridium botulinum F str.
Langeland]
gi|169121450|gb|ACA45286.1| 30S ribosomal protein S18 [Clostridium botulinum B1 str. Okra]
gi|169406809|gb|ACA55220.1| 30S ribosomal protein S18 [Clostridium botulinum A3 str. Loch
Maree]
gi|182668122|gb|EDT80101.1| ribosomal protein S18 [Clostridium botulinum NCTC 2916]
gi|182673233|gb|EDT85194.1| 30S ribosomal protein S18 [Clostridium botulinum Bf]
gi|226841199|gb|ACO83865.1| ribosomal protein S18 [Clostridium botulinum A2 str. Kyoto]
gi|229260880|gb|ACQ51913.1| 30S ribosomal protein S18 [Clostridium botulinum Ba4 str. 657]
gi|295320957|gb|ADG01335.1| 30S ribosomal protein S18 [Clostridium botulinum F str. 230613]
gi|322807950|emb|CBZ05525.1| SSU ribosomal protein S18p [Clostridium botulinum H04402 065]
Length = 80
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + + IDYKDI L +F+++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 14 KRKVCTFCAEKSEAIDYKDINKLRKFVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|220933166|ref|YP_002510074.1| ribosomal protein S18 [Halothermothrix orenii H 168]
gi|219994476|gb|ACL71079.1| ribosomal protein S18 [Halothermothrix orenii H 168]
Length = 70
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ R K C ++DYK+++ L RFL+ RGKIVP RI+ K QR+L +AIKRAR
Sbjct: 1 MARRNKPCYFCTNKKAKLDYKEVKTLERFLTNRGKIVPRRITGNCAKHQRQLTRAIKRAR 60
Query: 74 YLGLIAYV 81
+ L+ YV
Sbjct: 61 NIALLPYV 68
>gi|114773242|ref|ZP_01450477.1| 30S ribosomal subunit protein S18 [alpha proteobacterium
HTCC2255]
gi|114546361|gb|EAU49270.1| 30S ribosomal subunit protein S18 [alpha proteobacterium
HTCC2255]
Length = 75
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
S +G IDYKD L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 SAEGVVEIDYKDTATLRNYVTESGKIVPSRITGTSAKYQRQLSTAIKRARFLALLPYTD 72
>gi|15677187|ref|NP_274340.1| 30S ribosomal protein S18 [Neisseria meningitidis MC58]
gi|59801014|ref|YP_207726.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA 1090]
gi|121635032|ref|YP_975277.1| 30S ribosomal protein S18 [Neisseria meningitidis FAM18]
gi|161870196|ref|YP_001599366.1| 30S ribosomal protein S18 [Neisseria meningitidis 053442]
gi|194098898|ref|YP_002001963.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae NCCP11945]
gi|218768341|ref|YP_002342853.1| 30S ribosomal protein S18 [Neisseria meningitidis Z2491]
gi|239999181|ref|ZP_04719105.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|240013911|ref|ZP_04720824.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI18]
gi|240016353|ref|ZP_04722893.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA6140]
gi|240080472|ref|ZP_04725015.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|240113160|ref|ZP_04727650.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|240115916|ref|ZP_04729978.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|240118214|ref|ZP_04732276.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|240121480|ref|ZP_04734442.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID24-1]
gi|240123762|ref|ZP_04736718.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|240125953|ref|ZP_04738839.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|240128465|ref|ZP_04741126.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|254493952|ref|ZP_05107123.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 1291]
gi|254805120|ref|YP_003083341.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha14]
gi|260440269|ref|ZP_05794085.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|261379073|ref|ZP_05983646.1| ribosomal protein S18 [Neisseria cinerea ATCC 14685]
gi|268595011|ref|ZP_06129178.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|268596609|ref|ZP_06130776.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|268599239|ref|ZP_06133406.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|268601586|ref|ZP_06135753.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|268603925|ref|ZP_06138092.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|268682388|ref|ZP_06149250.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|268684546|ref|ZP_06151408.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|268686856|ref|ZP_06153718.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|291043563|ref|ZP_06569279.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|293398877|ref|ZP_06643042.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae F62]
gi|296314492|ref|ZP_06864433.1| ribosomal protein S18 [Neisseria polysaccharea ATCC 43768]
gi|304387368|ref|ZP_07369560.1| 30S ribosomal protein S18 [Neisseria meningitidis ATCC 13091]
gi|313668458|ref|YP_004048742.1| 30S ribosomal protein S18 [Neisseria lactamica ST-640]
gi|60397121|sp|P0A0X6|RS18_NEIMA RecName: Full=30S ribosomal protein S18
gi|60397126|sp|P0A0X7|RS18_NEIMB RecName: Full=30S ribosomal protein S18
gi|60397129|sp|P0A0X8|RS18_NEIGO RecName: Full=30S ribosomal protein S18
gi|75507399|sp|Q5F923|RS18_NEIG1 RecName: Full=30S ribosomal protein S18
gi|166220963|sp|A1KUE8|RS18_NEIMF RecName: Full=30S ribosomal protein S18
gi|189029682|sp|A9LZQ1|RS18_NEIM0 RecName: Full=30S ribosomal protein S18
gi|229560046|sp|B4RMH8|RS18_NEIG2 RecName: Full=30S ribosomal protein S18
gi|2196759|gb|AAB61230.1| ribosomal protein S18 [Neisseria gonorrhoeae]
gi|7226563|gb|AAF41696.1| 30S ribosomal protein S18 [Neisseria meningitidis MC58]
gi|59717909|gb|AAW89314.1| putative 30S ribosomal protein S18 [Neisseria gonorrhoeae FA
1090]
gi|120866738|emb|CAM10491.1| 30S ribosomal protein S18 [Neisseria meningitidis FAM18]
gi|121052349|emb|CAM08681.1| 30S ribosomal protein S18 [Neisseria meningitidis Z2491]
gi|161595749|gb|ABX73409.1| 30S ribosomal protein S18 [Neisseria meningitidis 053442]
gi|193934188|gb|ACF30012.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae NCCP11945]
gi|226512992|gb|EEH62337.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 1291]
gi|254668662|emb|CBA06343.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha14]
gi|254671749|emb|CBA09574.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha153]
gi|254673115|emb|CBA07862.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha275]
gi|261392399|emb|CAX49941.1| 30S ribosomal protein S18 [Neisseria meningitidis 8013]
gi|268548400|gb|EEZ43818.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|268550397|gb|EEZ45416.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|268583370|gb|EEZ48046.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|268585717|gb|EEZ50393.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|268588056|gb|EEZ52732.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|268622672|gb|EEZ55072.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|268624830|gb|EEZ57230.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|268627140|gb|EEZ59540.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|269144452|gb|EEZ70870.1| ribosomal protein S18 [Neisseria cinerea ATCC 14685]
gi|291012026|gb|EFE04015.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|291610291|gb|EFF39401.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae F62]
gi|296838794|gb|EFH22732.1| ribosomal protein S18 [Neisseria polysaccharea ATCC 43768]
gi|304338619|gb|EFM04737.1| 30S ribosomal protein S18 [Neisseria meningitidis ATCC 13091]
gi|308389439|gb|ADO31759.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha710]
gi|309379250|emb|CBX22207.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005920|emb|CBN87377.1| 30S ribosomal protein S18 [Neisseria lactamica 020-06]
gi|316984123|gb|EFV63101.1| ribosomal protein S18 [Neisseria meningitidis H44/76]
gi|317164469|gb|ADV08010.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae TCDC-NG08107]
gi|319410587|emb|CBY90956.1| 30S ribosomal protein S18 [Neisseria meningitidis WUE 2594]
gi|325128382|gb|EGC51265.1| ribosomal protein S18 [Neisseria meningitidis N1568]
gi|325130390|gb|EGC53155.1| ribosomal protein S18 [Neisseria meningitidis OX99.30304]
gi|325132479|gb|EGC55172.1| ribosomal protein S18 [Neisseria meningitidis M6190]
gi|325134439|gb|EGC57084.1| ribosomal protein S18 [Neisseria meningitidis M13399]
gi|325136176|gb|EGC58784.1| ribosomal protein S18 [Neisseria meningitidis M0579]
gi|325138253|gb|EGC60822.1| ribosomal protein S18 [Neisseria meningitidis ES14902]
gi|325140455|gb|EGC62976.1| ribosomal protein S18 [Neisseria meningitidis CU385]
gi|325142508|gb|EGC64909.1| ribosomal protein S18 [Neisseria meningitidis 961-5945]
gi|325144539|gb|EGC66838.1| ribosomal protein S18 [Neisseria meningitidis M01-240013]
gi|325198472|gb|ADY93928.1| ribosomal protein S18 [Neisseria meningitidis G2136]
gi|325200054|gb|ADY95509.1| ribosomal protein S18 [Neisseria meningitidis H44/76]
gi|325201969|gb|ADY97423.1| ribosomal protein S18 [Neisseria meningitidis M01-240149]
gi|325204320|gb|ADY99773.1| ribosomal protein S18 [Neisseria meningitidis M01-240355]
gi|325205907|gb|ADZ01360.1| ribosomal protein S18 [Neisseria meningitidis M04-240196]
gi|325208280|gb|ADZ03732.1| ribosomal protein S18 [Neisseria meningitidis NZ-05/33]
Length = 76
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+S+ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAFYQRQLAVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|15675656|ref|NP_269830.1| 30S ribosomal protein S18 [Streptococcus pyogenes M1 GAS]
gi|19746762|ref|NP_607898.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS8232]
gi|21911116|ref|NP_665384.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS315]
gi|28895199|ref|NP_801549.1| 30S ribosomal protein S18 [Streptococcus pyogenes SSI-1]
gi|50914911|ref|YP_060883.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10394]
gi|71904202|ref|YP_281005.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS6180]
gi|71911366|ref|YP_282916.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS5005]
gi|94989188|ref|YP_597289.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS9429]
gi|94991129|ref|YP_599229.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10270]
gi|94993075|ref|YP_601174.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS2096]
gi|94995008|ref|YP_603106.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10750]
gi|139473173|ref|YP_001127888.1| 30S ribosomal protein S18 [Streptococcus pyogenes str. Manfredo]
gi|195977489|ref|YP_002122733.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|222153664|ref|YP_002562841.1| 30S ribosomal protein S18 [Streptococcus uberis 0140J]
gi|225869195|ref|YP_002745143.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus]
gi|225869851|ref|YP_002745798.1| 30S ribosomal protein S18 [Streptococcus equi subsp. equi 4047]
gi|251783273|ref|YP_002997578.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306826730|ref|ZP_07460032.1| 30S ribosomal protein S18 [Streptococcus pyogenes ATCC 10782]
gi|313889713|ref|ZP_07823356.1| ribosomal protein S18 [Streptococcus pseudoporcinus SPIN 20026]
gi|332523695|ref|ZP_08399947.1| ribosomal protein S18 [Streptococcus porcinus str. Jelinkova 176]
gi|54039418|sp|P66476|RS18_STRP3 RecName: Full=30S ribosomal protein S18
gi|54039419|sp|P66477|RS18_STRP8 RecName: Full=30S ribosomal protein S18
gi|54042151|sp|P66475|RS18_STRP1 RecName: Full=30S ribosomal protein S18
gi|59798612|sp|Q5XA63|RS18_STRP6 RecName: Full=30S ribosomal protein S18
gi|122986815|sp|Q1J524|RS18_STRPF RecName: Full=30S ribosomal protein S18
gi|123080292|sp|Q1JF74|RS18_STRPD RecName: Full=30S ribosomal protein S18
gi|123382262|sp|Q1JA31|RS18_STRPB RecName: Full=30S ribosomal protein S18
gi|123382494|sp|Q1JK78|RS18_STRPC RecName: Full=30S ribosomal protein S18
gi|123761392|sp|Q48RL0|RS18_STRPM RecName: Full=30S ribosomal protein S18
gi|166222246|sp|A2RCR6|RS18_STRPG RecName: Full=30S ribosomal protein S18
gi|229560067|sp|B4U153|RS18_STREM RecName: Full=30S ribosomal protein S18
gi|254812956|sp|C0MB81|RS18_STRE4 RecName: Full=30S ribosomal protein S18
gi|254812959|sp|B9DVK2|RS18_STRU0 RecName: Full=30S ribosomal protein S18
gi|259494819|sp|C0MEL9|RS18_STRS7 RecName: Full=30S ribosomal protein S18
gi|13622868|gb|AAK34551.1| 30S ribosomal protein S18 [Streptococcus pyogenes M1 GAS]
gi|19748993|gb|AAL98397.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS8232]
gi|21905326|gb|AAM80187.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS315]
gi|28810445|dbj|BAC63382.1| 30S ribosomal protein S18 [Streptococcus pyogenes SSI-1]
gi|50903985|gb|AAT87700.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10394]
gi|71803297|gb|AAX72650.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS6180]
gi|71854148|gb|AAZ52171.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS5005]
gi|94542696|gb|ABF32745.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS9429]
gi|94544637|gb|ABF34685.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10270]
gi|94546583|gb|ABF36630.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS2096]
gi|94548516|gb|ABF38562.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10750]
gi|134271419|emb|CAM29639.1| 30S ribosomal protein S18 [Streptococcus pyogenes str. Manfredo]
gi|195974194|gb|ACG61720.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|222114477|emb|CAR43335.1| 30S ribosomal protein S18 [Streptococcus uberis 0140J]
gi|225699255|emb|CAW92568.1| 30S ribosomal protein S18 [Streptococcus equi subsp. equi 4047]
gi|225702471|emb|CAX00375.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus]
gi|242391905|dbj|BAH82364.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304431019|gb|EFM34026.1| 30S ribosomal protein S18 [Streptococcus pyogenes ATCC 10782]
gi|313122010|gb|EFR45106.1| ribosomal protein S18 [Streptococcus pseudoporcinus SPIN 20026]
gi|322412656|gb|EFY03564.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323127997|gb|ADX25294.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|332314959|gb|EGJ27944.1| ribosomal protein S18 [Streptococcus porcinus str. Jelinkova 176]
Length = 79
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDFIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YVN
Sbjct: 65 KRARVMALMPYVN 77
>gi|161506643|ref|YP_001576591.1| 30S ribosomal protein S18 [Lactobacillus helveticus DPC 4571]
gi|172048334|sp|A8YW49|RS18_LACH4 RecName: Full=30S ribosomal protein S18
gi|160347632|gb|ABX26306.1| 30S ribosomal protein S18 [Lactobacillus helveticus DPC 4571]
gi|328468768|gb|EGF39739.1| 30S ribosomal protein S18 [Lactobacillus helveticus MTCC 5463]
Length = 77
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +GL+ +V
Sbjct: 24 VDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLLPFV 74
>gi|58336363|ref|YP_192948.1| 30S ribosomal protein S18 [Lactobacillus acidophilus NCFM]
gi|227877549|ref|ZP_03995609.1| 30S ribosomal protein S18 [Lactobacillus crispatus JV-V01]
gi|227893830|ref|ZP_04011635.1| 30S ribosomal protein S18 [Lactobacillus ultunensis DSM 16047]
gi|227902586|ref|ZP_04020391.1| 30S ribosomal protein S18 [Lactobacillus acidophilus ATCC 4796]
gi|256843823|ref|ZP_05549310.1| 30S ribosomal protein S18 [Lactobacillus crispatus 125-2-CHN]
gi|256849622|ref|ZP_05555054.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-1A-US]
gi|262046290|ref|ZP_06019253.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-3A-US]
gi|293380899|ref|ZP_06626935.1| 30S ribosomal protein S18 [Lactobacillus crispatus 214-1]
gi|295691871|ref|YP_003600481.1| 30S ribosomal protein s18 [Lactobacillus crispatus ST1]
gi|312977110|ref|ZP_07788859.1| ribosomal protein S18 [Lactobacillus crispatus CTV-05]
gi|315037239|ref|YP_004030807.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1112]
gi|325955730|ref|YP_004286340.1| 30S ribosomal protein S18 [Lactobacillus acidophilus 30SC]
gi|75507681|sp|Q5FN07|RS18_LACAC RecName: Full=30S ribosomal protein S18
gi|58253680|gb|AAV41917.1| 30S Ribosomal protein S18 [Lactobacillus acidophilus NCFM]
gi|227862848|gb|EEJ70307.1| 30S ribosomal protein S18 [Lactobacillus crispatus JV-V01]
gi|227864319|gb|EEJ71740.1| 30S ribosomal protein S18 [Lactobacillus ultunensis DSM 16047]
gi|227869675|gb|EEJ77096.1| 30S ribosomal protein S18 [Lactobacillus acidophilus ATCC 4796]
gi|256613728|gb|EEU18930.1| 30S ribosomal protein S18 [Lactobacillus crispatus 125-2-CHN]
gi|256713738|gb|EEU28727.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-1A-US]
gi|260573620|gb|EEX30177.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-3A-US]
gi|290922572|gb|EFD99538.1| 30S ribosomal protein S18 [Lactobacillus crispatus 214-1]
gi|295029977|emb|CBL49456.1| 30S ribosomal protein S18 [Lactobacillus crispatus ST1]
gi|310896438|gb|EFQ45503.1| ribosomal protein S18 [Lactobacillus crispatus CTV-05]
gi|312275372|gb|ADQ58012.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1112]
gi|323465566|gb|ADX69253.1| 30S ribosomal protein S18 [Lactobacillus helveticus H10]
gi|325332295|gb|ADZ06203.1| 30S ribosomal protein S18 [Lactobacillus acidophilus 30SC]
gi|327182558|gb|AEA31005.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1118]
Length = 78
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|309776775|ref|ZP_07671749.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 3_1_53]
gi|308915523|gb|EFP61289.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 3_1_53]
Length = 76
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNKIESIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 70 LLPYVS 75
>gi|225677181|ref|ZP_03788177.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590768|gb|EEH11999.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 91
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R S R K CPL+ +DYK+I LL++F S G+I+P R++ V KKQR+L AI R
Sbjct: 18 RTGSRRSKVCPLAASKDEDVDYKNIDLLSKFTSDYGRILPRRLTGVCAKKQRKLRLAIIR 77
Query: 72 ARYLGLIAYV 81
AR+L LI Y
Sbjct: 78 ARFLALIPYC 87
>gi|22537851|ref|NP_688702.1| 30S ribosomal protein S18 [Streptococcus agalactiae 2603V/R]
gi|25011796|ref|NP_736191.1| 30S ribosomal protein S18 [Streptococcus agalactiae NEM316]
gi|76786818|ref|YP_330321.1| 30S ribosomal protein S18 [Streptococcus agalactiae A909]
gi|76798964|ref|ZP_00781165.1| ribosomal protein S18 [Streptococcus agalactiae 18RS21]
gi|77406986|ref|ZP_00784002.1| ribosomal protein S18 [Streptococcus agalactiae H36B]
gi|77410339|ref|ZP_00786755.1| ribosomal protein S18 [Streptococcus agalactiae COH1]
gi|77412637|ref|ZP_00788913.1| ribosomal protein S18 [Streptococcus agalactiae CJB111]
gi|228477147|ref|ZP_04061785.1| ribosomal protein S18 [Streptococcus salivarius SK126]
gi|312863068|ref|ZP_07723306.1| ribosomal protein S18 [Streptococcus vestibularis F0396]
gi|322516033|ref|ZP_08068970.1| 30S ribosomal protein S18 [Streptococcus vestibularis ATCC 49124]
gi|59798902|sp|Q8DXY3|RS18_STRA5 RecName: Full=30S ribosomal protein S18
gi|59798903|sp|Q8E3K2|RS18_STRA3 RecName: Full=30S ribosomal protein S18
gi|123601328|sp|Q3JZI2|RS18_STRA1 RecName: Full=30S ribosomal protein S18
gi|22534746|gb|AAN00575.1|AE014269_19 ribosomal protein S18 [Streptococcus agalactiae 2603V/R]
gi|24413337|emb|CAD47416.1| 30S ribosomal protein S18 [Streptococcus agalactiae NEM316]
gi|76561875|gb|ABA44459.1| ribosomal protein S18 [Streptococcus agalactiae A909]
gi|76585685|gb|EAO62242.1| ribosomal protein S18 [Streptococcus agalactiae 18RS21]
gi|77161309|gb|EAO72344.1| ribosomal protein S18 [Streptococcus agalactiae CJB111]
gi|77171052|gb|EAO74505.1| ribosomal protein S18 [Streptococcus agalactiae COH1]
gi|77174410|gb|EAO77263.1| ribosomal protein S18 [Streptococcus agalactiae H36B]
gi|228251166|gb|EEK10337.1| ribosomal protein S18 [Streptococcus salivarius SK126]
gi|311100604|gb|EFQ58809.1| ribosomal protein S18 [Streptococcus vestibularis F0396]
gi|319745682|gb|EFV97981.1| 30S ribosomal protein S18 [Streptococcus agalactiae ATCC 13813]
gi|322125448|gb|EFX96794.1| 30S ribosomal protein S18 [Streptococcus vestibularis ATCC 49124]
Length = 79
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YVN
Sbjct: 65 KRARVMALMPYVN 77
>gi|56477753|ref|YP_159342.1| 30S ribosomal protein S18 [Aromatoleum aromaticum EbN1]
gi|56313796|emb|CAI08441.1| 30S Ribosomal protein S18 [Aromatoleum aromaticum EbN1]
Length = 91
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKD+ +L F+++ KI+P+RI+ QR+L+ A+KR
Sbjct: 18 RGLFKRRKFCRFTAEKIEEVDYKDVDILKDFVTENSKIMPARITGTKAGYQRQLSTAVKR 77
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 78 ARFLALLPYTDL 89
>gi|227540353|ref|ZP_03970402.1| ribosomal protein S18 [Sphingobacterium spiritivorum ATCC 33300]
gi|300771167|ref|ZP_07081043.1| 30S ribosomal protein S18 [Sphingobacterium spiritivorum ATCC
33861]
gi|227239677|gb|EEI89692.1| ribosomal protein S18 [Sphingobacterium spiritivorum ATCC 33300]
gi|300761837|gb|EFK58657.1| 30S ribosomal protein S18 [Sphingobacterium spiritivorum ATCC
33861]
Length = 87
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR+
Sbjct: 16 DNRKKYCRFKKNGIKYIDYKDANFLLKFVNDQGKILPRRLTGTSLKFQRKVAQAVKRARH 75
Query: 75 LGLIAYV 81
+GL+ YV
Sbjct: 76 IGLLPYV 82
>gi|86606307|ref|YP_475070.1| 30S ribosomal protein S18 [Synechococcus sp. JA-3-3Ab]
gi|123724575|sp|Q2JU22|RS18_SYNJA RecName: Full=30S ribosomal protein S18
gi|86554849|gb|ABC99807.1| ribosomal protein S18 [Synechococcus sp. JA-3-3Ab]
Length = 71
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
V RR+ P+ G P I Y D+ LL +F+++RGKI+P RI+ ++ K+QR+++KAIK+AR
Sbjct: 2 VYARRRLSPIK-PGEP-IKYTDVELLKKFVTERGKILPRRITGLTAKQQRQVSKAIKQAR 59
Query: 74 YLGLIAYVN 82
LGL+ +VN
Sbjct: 60 ILGLLYFVN 68
>gi|313122784|ref|YP_004033043.1| 30S ribosomal protein s18 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279347|gb|ADQ60066.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685098|gb|EGD27229.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 78
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL F+S+RGKI+P R++ S K QR++AKAIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKHFISERGKILPRRVTGTSAKNQRKVAKAIKRARIMGLLPFV 75
>gi|159027933|emb|CAO87096.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 71
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+S IDYKD LL +F+++RGK++P RI+ ++ K+QR+L +A+KRAR +
Sbjct: 4 YRKRLSPISPSQP--IDYKDTELLRKFITERGKLLPRRITGLTSKQQRDLTEAVKRARLM 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|282895502|ref|ZP_06303639.1| Ribosomal protein S18 [Raphidiopsis brookii D9]
gi|281199535|gb|EFA74398.1| Ribosomal protein S18 [Raphidiopsis brookii D9]
Length = 71
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+L AIKRAR L
Sbjct: 4 YRRRLSPIK-PGEP-IDYKDVDLLRKFMTERGKILPRRITGLTSQQQRQLTLAIKRARIL 61
Query: 76 GLIAYVN 82
+ ++N
Sbjct: 62 AFLPFIN 68
>gi|116493585|ref|YP_805319.1| 30S ribosomal protein S18 [Lactobacillus casei ATCC 334]
gi|191636835|ref|YP_001986001.1| 30S ribosomal protein S18 [Lactobacillus casei BL23]
gi|199598219|ref|ZP_03211640.1| Ribosomal protein S18 [Lactobacillus rhamnosus HN001]
gi|227533495|ref|ZP_03963544.1| ribosomal protein S18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229551090|ref|ZP_04439815.1| ribosomal protein S18 [Lactobacillus rhamnosus LMS2-1]
gi|239630816|ref|ZP_04673847.1| SSU ribosomal protein S18P [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|258507008|ref|YP_003169759.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus GG]
gi|258538205|ref|YP_003172704.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus Lc 705]
gi|301065139|ref|YP_003787162.1| 30S ribosomal protein L18 [Lactobacillus casei str. Zhang]
gi|122264952|sp|Q03D45|RS18_LACC3 RecName: Full=30S ribosomal protein S18
gi|229560041|sp|B3W6R6|RS18_LACCB RecName: Full=30S ribosomal protein S18
gi|116103735|gb|ABJ68877.1| SSU ribosomal protein S18P [Lactobacillus casei ATCC 334]
gi|190711137|emb|CAQ65143.1| 30S ribosomal protein S18 [Lactobacillus casei BL23]
gi|199590822|gb|EDY98907.1| Ribosomal protein S18 [Lactobacillus rhamnosus HN001]
gi|227188824|gb|EEI68891.1| ribosomal protein S18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229315551|gb|EEN81524.1| ribosomal protein S18 [Lactobacillus rhamnosus LMS2-1]
gi|239527099|gb|EEQ66100.1| SSU ribosomal protein S18P [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|257146935|emb|CAR85908.1| SSU/30S ribosomal protein S18P [Lactobacillus rhamnosus GG]
gi|257149881|emb|CAR88853.1| SSU/30S ribosomal protein S18P [Lactobacillus rhamnosus Lc 705]
gi|259648377|dbj|BAI40539.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus GG]
gi|300437546|gb|ADK17312.1| Ribosomal protein S18 [Lactobacillus casei str. Zhang]
gi|327380874|gb|AEA52350.1| 30S ribosomal protein S18 [Lactobacillus casei LC2W]
gi|327384038|gb|AEA55512.1| 30S ribosomal protein S18 [Lactobacillus casei BD-II]
gi|328463730|gb|EGF35304.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus MTCC 5462]
Length = 78
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL+RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V+
Sbjct: 25 IDYKDTNLLDRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLPFVS 76
>gi|293400277|ref|ZP_06644423.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306677|gb|EFE47920.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 76
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNKIEYIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 70 LLPYVS 75
>gi|170692294|ref|ZP_02883457.1| ribosomal protein S18 [Burkholderia graminis C4D1M]
gi|307729539|ref|YP_003906763.1| 30S ribosomal protein S18 [Burkholderia sp. CCGE1003]
gi|170142724|gb|EDT10889.1| ribosomal protein S18 [Burkholderia graminis C4D1M]
gi|307584074|gb|ADN57472.1| ribosomal protein S18 [Burkholderia sp. CCGE1003]
Length = 91
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G IDYKDI L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKSHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LVPYTD 87
>gi|116628692|ref|YP_813864.1| ribosomal protein S18 [Lactobacillus gasseri ATCC 33323]
gi|311111569|ref|ZP_07712966.1| ribosomal protein S18 [Lactobacillus gasseri MV-22]
gi|122274310|sp|Q047E6|RS18_LACGA RecName: Full=30S ribosomal protein S18
gi|116094274|gb|ABJ59426.1| SSU ribosomal protein S18P [Lactobacillus gasseri ATCC 33323]
gi|311066723|gb|EFQ47063.1| ribosomal protein S18 [Lactobacillus gasseri MV-22]
Length = 77
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 24 IDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTVAIKRARVMGLLPFV 74
>gi|124112116|ref|YP_001019134.1| ribosomal protein S18 [Chlorokybus atmophyticus]
gi|205831445|sp|Q19V75|RR18_CHLAT RecName: Full=30S ribosomal protein S18, chloroplastic
gi|124012224|gb|ABD62248.2| ribosomal protein S18 [Chlorokybus atmophyticus]
Length = 71
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N+S RR S P+ K IDYK+I LL++F++++GKI+P R++ +S K+QR + KAIK+A
Sbjct: 2 NLSRRRVS-PI--KPGETIDYKNIDLLSQFITEQGKILPRRVNGISAKQQRAITKAIKQA 58
Query: 73 RYLGLIAYVN 82
R+L L+ ++N
Sbjct: 59 RFLALLPFLN 68
>gi|42518093|ref|NP_964023.1| 30S ribosomal protein S18 [Lactobacillus johnsonii NCC 533]
gi|227889149|ref|ZP_04006954.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200]
gi|238853347|ref|ZP_04643727.1| ribosomal protein S18 [Lactobacillus gasseri 202-4]
gi|268318570|ref|YP_003292226.1| ribosomal protein S18 [Lactobacillus johnsonii FI9785]
gi|282852324|ref|ZP_06261666.1| ribosomal protein S18 [Lactobacillus gasseri 224-1]
gi|300362670|ref|ZP_07058846.1| 30S ribosomal protein S18 [Lactobacillus gasseri JV-V03]
gi|59798807|sp|Q74M26|RS18_LACJO RecName: Full=30S ribosomal protein S18
gi|41582377|gb|AAS07989.1| 30S ribosomal protein S19 [Lactobacillus johnsonii NCC 533]
gi|227850378|gb|EEJ60464.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200]
gi|238834035|gb|EEQ26292.1| ribosomal protein S18 [Lactobacillus gasseri 202-4]
gi|262396945|emb|CAX65959.1| ribosomal protein S18 [Lactobacillus johnsonii FI9785]
gi|282556066|gb|EFB61686.1| ribosomal protein S18 [Lactobacillus gasseri 224-1]
gi|300353661|gb|EFJ69533.1| 30S ribosomal protein S18 [Lactobacillus gasseri JV-V03]
gi|329666400|gb|AEB92348.1| 30S ribosomal protein S19 [Lactobacillus johnsonii DPC 6026]
Length = 78
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTVAIKRARVMGLLPFV 75
>gi|301062683|ref|ZP_07203301.1| ribosomal protein S18 [delta proteobacterium NaphS2]
gi|300443206|gb|EFK07353.1| ribosomal protein S18 [delta proteobacterium NaphS2]
Length = 93
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R HRRK C + IDYKD+++L F ++RGKI P RIS K QR L AIKR
Sbjct: 19 RKTYHRRKVCKFCADSSLSIDYKDVKILRYFTTERGKITPRRISGNCAKHQRMLTVAIKR 78
Query: 72 ARYLGLIAYVN 82
AR + L+ Y
Sbjct: 79 ARNIALLPYTT 89
>gi|118602663|ref|YP_903878.1| 30S ribosomal protein S18 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|205617138|sp|A1AWV0|RS18_RUTMC RecName: Full=30S ribosomal protein S18
gi|118567602|gb|ABL02407.1| SSU ribosomal protein S18P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 84
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G RIDYKD+ L + +++ GKI PSR++ S K QR+L AIKRAR+L LI Y
Sbjct: 19 CRFTAAGITRIDYKDVDTLLKNINESGKITPSRMTGTSAKFQRQLTTAIKRARFLALIPY 78
Query: 81 VN 82
+
Sbjct: 79 TD 80
>gi|55821724|ref|YP_140166.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMG 18311]
gi|55823644|ref|YP_142085.1| 30S ribosomal protein S18 [Streptococcus thermophilus CNRZ1066]
gi|116628444|ref|YP_821063.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMD-9]
gi|81676514|sp|Q5LY50|RS18_STRT1 RecName: Full=30S ribosomal protein S18
gi|81676666|sp|Q5M2Q5|RS18_STRT2 RecName: Full=30S ribosomal protein S18
gi|122266961|sp|Q03IV5|RS18_STRTD RecName: Full=30S ribosomal protein S18
gi|55737709|gb|AAV61351.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMG 18311]
gi|55739629|gb|AAV63270.1| 30S ribosomal protein S18 [Streptococcus thermophilus CNRZ1066]
gi|116101721|gb|ABJ66867.1| SSU ribosomal protein S18P [Streptococcus thermophilus LMD-9]
gi|312279064|gb|ADQ63721.1| 30S ribosomal protein S18 [Streptococcus thermophilus ND03]
Length = 79
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIKRAR +
Sbjct: 12 RKKFDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMA 71
Query: 77 LIAYVN 82
L+ YVN
Sbjct: 72 LMPYVN 77
>gi|172059038|ref|YP_001815498.1| ribosomal protein S18 [Exiguobacterium sibiricum 255-15]
gi|171991559|gb|ACB62481.1| ribosomal protein S18 [Exiguobacterium sibiricum 255-15]
Length = 76
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKR+R + LI Y
Sbjct: 14 CYFTSNHITHIDYKDVELLKRFISERGKILPRRVTGTSAKYQRPLTIAIKRSRQMALIPY 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|186475678|ref|YP_001857148.1| 30S ribosomal protein S18 [Burkholderia phymatum STM815]
gi|229559972|sp|B2JG20|RS18_BURP8 RecName: Full=30S ribosomal protein S18
gi|184192137|gb|ACC70102.1| ribosomal protein S18 [Burkholderia phymatum STM815]
Length = 91
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKDI L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEQIDYKDIDTLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LMPYTD 87
>gi|326799756|ref|YP_004317575.1| 30S ribosomal protein S18 [Sphingobacterium sp. 21]
gi|326550520|gb|ADZ78905.1| 30S ribosomal protein S18 [Sphingobacterium sp. 21]
Length = 87
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR+
Sbjct: 16 DNRKKYCRFKKNGIKYIDYKDANFLLKFVNDQGKILPRRLTGTSLKFQRKVAQAVKRARH 75
Query: 75 LGLIAYVN 82
+GL+ YV
Sbjct: 76 IGLLPYVT 83
>gi|29654192|ref|NP_819884.1| 30S ribosomal protein S18 [Coxiella burnetii RSA 493]
gi|153209209|ref|ZP_01947275.1| ribosomal protein S18 [Coxiella burnetii 'MSU Goat Q177']
gi|154705894|ref|YP_001424310.1| 30S ribosomal protein S18 [Coxiella burnetii Dugway 5J108-111]
gi|161829761|ref|YP_001596842.1| 30S ribosomal protein S18 [Coxiella burnetii RSA 331]
gi|165918540|ref|ZP_02218626.1| ribosomal protein S18 [Coxiella burnetii RSA 334]
gi|212212682|ref|YP_002303618.1| 30S ribosomal protein S18 [Coxiella burnetii CbuG_Q212]
gi|212218345|ref|YP_002305132.1| 30S ribosomal protein S18 [Coxiella burnetii CbuK_Q154]
gi|59798886|sp|Q83D75|RS18_COXBU RecName: Full=30S ribosomal protein S18
gi|189029674|sp|A9KFL6|RS18_COXBN RecName: Full=30S ribosomal protein S18
gi|189029675|sp|A9ND52|RS18_COXBR RecName: Full=30S ribosomal protein S18
gi|29541458|gb|AAO90398.1| SSU ribosomal protein S18P [Coxiella burnetii RSA 493]
gi|120575464|gb|EAX32088.1| ribosomal protein S18 [Coxiella burnetii 'MSU Goat Q177']
gi|154355180|gb|ABS76642.1| SSU ribosomal protein S18P [Coxiella burnetii Dugway 5J108-111]
gi|161761628|gb|ABX77270.1| ribosomal protein S18 [Coxiella burnetii RSA 331]
gi|165917786|gb|EDR36390.1| ribosomal protein S18 [Coxiella burnetii RSA 334]
gi|212011092|gb|ACJ18473.1| SSU ribosomal protein S18P [Coxiella burnetii CbuG_Q212]
gi|212012607|gb|ACJ19987.1| SSU ribosomal protein S18P [Coxiella burnetii CbuK_Q154]
Length = 73
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C K IDYKD+ L ++ + G++VPSRI+ K QR++++AIK ARYL
Sbjct: 5 RKKFCAFDAKNLQEIDYKDVNTLKDYIMESGRVVPSRITGTCAKHQRQISRAIKLARYLA 64
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 65 LLPYCD 70
>gi|119897011|ref|YP_932224.1| 30S ribosomal protein S18 [Azoarcus sp. BH72]
gi|237654323|ref|YP_002890637.1| 30S ribosomal protein S18 [Thauera sp. MZ1T]
gi|119669424|emb|CAL93337.1| 30S ribosomal protein S18 [Azoarcus sp. BH72]
gi|237625570|gb|ACR02260.1| ribosomal protein S18 [Thauera sp. MZ1T]
Length = 91
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKD+ +L F+++ KI+P+RI+ QR+L+ A+KR
Sbjct: 18 RGLFKRRKFCRFTAEKIEEVDYKDVDILKDFITENAKIMPARITGTKAGYQRQLSVAVKR 77
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 78 ARFLALMPYTDL 89
>gi|323526189|ref|YP_004228342.1| 30S ribosomal protein S18 [Burkholderia sp. CCGE1001]
gi|323383191|gb|ADX55282.1| ribosomal protein S18 [Burkholderia sp. CCGE1001]
Length = 91
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G IDYKDI L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LVPYTD 87
>gi|157694460|ref|YP_001488922.1| 30S ribosomal protein S18 [Bacillus pumilus SAFR-032]
gi|167011187|sp|A8FJE5|RS18_BACP2 RecName: Full=30S ribosomal protein S18
gi|157683218|gb|ABV64362.1| ribosomal protein S18 [Bacillus pumilus SAFR-032]
Length = 79
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK++R + L+ Y
Sbjct: 16 CFFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTSAKYQRKLTLAIKKSRQMALLPY 75
Query: 81 VN 82
V
Sbjct: 76 VT 77
>gi|56750435|ref|YP_171136.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 6301]
gi|81299932|ref|YP_400140.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 7942]
gi|81676949|sp|Q5N503|RS18_SYNP6 RecName: Full=30S ribosomal protein S18
gi|123769262|sp|Q31P66|RS18_SYNE7 RecName: Full=30S ribosomal protein S18
gi|56685394|dbj|BAD78616.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 6301]
gi|81168813|gb|ABB57153.1| SSU ribosomal protein S18P [Synechococcus elongatus PCC 7942]
Length = 71
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ K + IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+LA AIKRAR L
Sbjct: 4 FRRRLSPI--KPSDPIDYKDVDLLRKFITERGKILPRRITGLTARQQRDLAVAIKRARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFLN 68
>gi|148244753|ref|YP_001219447.1| 30S ribosomal protein S18 [Candidatus Vesicomyosocius okutanii
HA]
gi|205618817|sp|A5CWE0|RS18_VESOH RecName: Full=30S ribosomal protein S18
gi|146326580|dbj|BAF61723.1| 30S ribosomal protein S18 [Candidatus Vesicomyosocius okutanii
HA]
Length = 84
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G +IDYKDI +L + + + GKI PSR++ S K QR+L AIKRAR+L LI Y
Sbjct: 19 CRFTAAGVTKIDYKDIDILLKNIDESGKITPSRMTGTSAKFQRKLTTAIKRARFLALIPY 78
Query: 81 VN 82
+
Sbjct: 79 TD 80
>gi|269216494|ref|ZP_06160348.1| ribosomal protein S18 [Slackia exigua ATCC 700122]
gi|269130023|gb|EEZ61105.1| ribosomal protein S18 [Slackia exigua ATCC 700122]
Length = 86
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N RRK C G IDYKD +L +F++ RGKI P R++ + QR++A AIK A
Sbjct: 5 NKQPRRKFCQFCKDGTDYIDYKDTAMLRKFVTDRGKIKPRRVTGACVQHQRDIATAIKNA 64
Query: 73 RYLGLIAYV 81
R +GL+ YV
Sbjct: 65 REMGLMPYV 73
>gi|67924091|ref|ZP_00517538.1| Ribosomal protein S18 [Crocosphaera watsonii WH 8501]
gi|67854052|gb|EAM49364.1| Ribosomal protein S18 [Crocosphaera watsonii WH 8501]
Length = 71
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+ K I+YKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+L
Sbjct: 4 YRKRLSPIPPKQP--INYKDTELLRKFITERGKILPRRITGLTAKQQRALTTAVKRARFL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|255284244|ref|ZP_05348799.1| ribosomal protein S18 [Bryantella formatexigens DSM 14469]
gi|255265197|gb|EET58402.1| ribosomal protein S18 [Bryantella formatexigens DSM 14469]
Length = 87
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGTCAKHQRS 68
Query: 65 LAKAIKRARYLGLIAYVN 82
L AIKRAR+L ++ YV
Sbjct: 69 LTVAIKRARHLAMMPYVQ 86
>gi|72382180|ref|YP_291535.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. NATL2A]
gi|124025720|ref|YP_001014836.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. NATL1A]
gi|123759898|sp|Q46KZ6|RS18_PROMT RecName: Full=30S ribosomal protein S18
gi|166220971|sp|A2C261|RS18_PROM1 RecName: Full=30S ribosomal protein S18
gi|72002030|gb|AAZ57832.1| SSU ribosomal protein S18P [Prochlorococcus marinus str. NATL2A]
gi|123960788|gb|ABM75571.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. NATL1A]
Length = 73
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N ++K P+ G P IDYKD+ LL +F++ RGKI+P R++ ++ K+QR+L A+KRA
Sbjct: 3 NSLFKQKLSPIK-PGDP-IDYKDVELLKKFITDRGKILPRRLTGLTAKQQRDLTTAVKRA 60
Query: 73 RYLGLIAYVN 82
R + L+ +VN
Sbjct: 61 RIIALLPFVN 70
>gi|329116032|ref|ZP_08244749.1| ribosomal protein S18 [Streptococcus parauberis NCFD 2020]
gi|326906437|gb|EGE53351.1| ribosomal protein S18 [Streptococcus parauberis NCFD 2020]
Length = 79
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDFIAANKIEYVDYKDTELLGRFVSERGKILPRRVTGTSAKNQRKVTAAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YVN
Sbjct: 65 KRARVMALMPYVN 77
>gi|87303683|ref|ZP_01086458.1| 30S ribosomal protein S18 [Synechococcus sp. WH 5701]
gi|87281788|gb|EAQ73753.1| 30S ribosomal protein S18 [Synechococcus sp. WH 5701]
Length = 73
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R+S ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVDLLKKFITERGKILPRRLSGLTAKQQRDLTNAVKRARIVALLPFVN 70
>gi|284929339|ref|YP_003421861.1| 30S ribosomal protein S18P [cyanobacterium UCYN-A]
gi|284809783|gb|ADB95480.1| SSU ribosomal protein S18P [cyanobacterium UCYN-A]
Length = 71
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR L
Sbjct: 4 YRKRLSPIPPKQP--IDYKDTELLRKFITERGKILPRRITGLTAKQQRALTTAVKRARIL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|259500769|ref|ZP_05743671.1| 30S ribosomal protein S18 [Lactobacillus iners DSM 13335]
gi|302190780|ref|ZP_07267034.1| ribosomal protein S18 [Lactobacillus iners AB-1]
gi|309804084|ref|ZP_07698165.1| ribosomal protein S18 [Lactobacillus iners LactinV 11V1-d]
gi|309804852|ref|ZP_07698914.1| ribosomal protein S18 [Lactobacillus iners LactinV 09V1-c]
gi|309805906|ref|ZP_07699938.1| ribosomal protein S18 [Lactobacillus iners LactinV 03V1-b]
gi|309807825|ref|ZP_07701757.1| ribosomal protein S18 [Lactobacillus iners LactinV 01V1-a]
gi|309809776|ref|ZP_07703630.1| ribosomal protein S18 [Lactobacillus iners SPIN 2503V10-D]
gi|312871319|ref|ZP_07731417.1| ribosomal protein S18 [Lactobacillus iners LEAF 3008A-a]
gi|312872794|ref|ZP_07732859.1| ribosomal protein S18 [Lactobacillus iners LEAF 2062A-h1]
gi|312873277|ref|ZP_07733332.1| ribosomal protein S18 [Lactobacillus iners LEAF 2052A-d]
gi|312874897|ref|ZP_07734916.1| ribosomal protein S18 [Lactobacillus iners LEAF 2053A-b]
gi|315654139|ref|ZP_07907055.1| 30S ribosomal protein S18 [Lactobacillus iners ATCC 55195]
gi|325912331|ref|ZP_08174728.1| ribosomal protein S18 [Lactobacillus iners UPII 143-D]
gi|325913704|ref|ZP_08176066.1| ribosomal protein S18 [Lactobacillus iners UPII 60-B]
gi|329919826|ref|ZP_08276777.1| ribosomal protein S18 [Lactobacillus iners SPIN 1401G]
gi|259167463|gb|EEW51958.1| 30S ribosomal protein S18 [Lactobacillus iners DSM 13335]
gi|308163852|gb|EFO66118.1| ribosomal protein S18 [Lactobacillus iners LactinV 11V1-d]
gi|308165791|gb|EFO68012.1| ribosomal protein S18 [Lactobacillus iners LactinV 09V1-c]
gi|308167682|gb|EFO69829.1| ribosomal protein S18 [Lactobacillus iners LactinV 03V1-b]
gi|308168927|gb|EFO71013.1| ribosomal protein S18 [Lactobacillus iners LactinV 01V1-a]
gi|308169955|gb|EFO71994.1| ribosomal protein S18 [Lactobacillus iners SPIN 2503V10-D]
gi|311089642|gb|EFQ48067.1| ribosomal protein S18 [Lactobacillus iners LEAF 2053A-b]
gi|311091157|gb|EFQ49546.1| ribosomal protein S18 [Lactobacillus iners LEAF 2052A-d]
gi|311091836|gb|EFQ50215.1| ribosomal protein S18 [Lactobacillus iners LEAF 2062A-h1]
gi|311093333|gb|EFQ51679.1| ribosomal protein S18 [Lactobacillus iners LEAF 3008A-a]
gi|315488835|gb|EFU78481.1| 30S ribosomal protein S18 [Lactobacillus iners ATCC 55195]
gi|325475990|gb|EGC79159.1| ribosomal protein S18 [Lactobacillus iners UPII 143-D]
gi|325477063|gb|EGC80213.1| ribosomal protein S18 [Lactobacillus iners UPII 60-B]
gi|328937173|gb|EGG33601.1| ribosomal protein S18 [Lactobacillus iners SPIN 1401G]
Length = 78
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+S IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+ +V+
Sbjct: 17 ISANHIDYIDYKDVDLLKRFISERGKILPRRVTGTSAKNQRMLTVAIKRARVMGLLPFVS 76
>gi|160871730|ref|ZP_02061862.1| ribosomal protein S18 [Rickettsiella grylli]
gi|159120529|gb|EDP45867.1| ribosomal protein S18 [Rickettsiella grylli]
Length = 78
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +S +G +DYKD+ LL L++ KIVPSR + + QR+L +AIKRAR+LG
Sbjct: 8 RRKHCRISAEGME-VDYKDLALLKSHLTETAKIVPSRTTGTTACVQRKLTQAIKRARFLG 66
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 67 LLPYCD 72
>gi|77163756|ref|YP_342281.1| ribosomal protein S18 [Nitrosococcus oceani ATCC 19707]
gi|254435623|ref|ZP_05049130.1| ribosomal protein S18 [Nitrosococcus oceani AFC27]
gi|300115387|ref|YP_003761962.1| 30S ribosomal protein S18 [Nitrosococcus watsonii C-113]
gi|123595160|sp|Q3JEJ5|RS18_NITOC RecName: Full=30S ribosomal protein S18
gi|76882070|gb|ABA56751.1| SSU ribosomal protein S18P [Nitrosococcus oceani ATCC 19707]
gi|207088734|gb|EDZ66006.1| ribosomal protein S18 [Nitrosococcus oceani AFC27]
gi|299541324|gb|ADJ29641.1| ribosomal protein S18 [Nitrosococcus watsonii C-113]
Length = 74
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+L++A+KRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLATLKDYITETGKIVPSRITGTKAKYQRQLSRAVKRARYLALLPYCD 72
>gi|326790180|ref|YP_004308001.1| ribosomal protein S18 [Clostridium lentocellum DSM 5427]
gi|326540944|gb|ADZ82803.1| ribosomal protein S18 [Clostridium lentocellum DSM 5427]
Length = 77
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ +R+ RRK +G +I+YKDI L +F+S+RGKI+P RI+ S K QR+L A
Sbjct: 3 MQKRHNRRRRKINQFAGDNIKKINYKDINTLKKFISERGKILPRRITGNSAKAQRKLTVA 62
Query: 69 IKRARYLGLIAYV 81
IKRAR++ L+ Y
Sbjct: 63 IKRARHIALLPYT 75
>gi|91783365|ref|YP_558571.1| 30S ribosomal protein S18 [Burkholderia xenovorans LB400]
gi|296157726|ref|ZP_06840560.1| ribosomal protein S18 [Burkholderia sp. Ch1-1]
gi|123168536|sp|Q13ZH0|RS18_BURXL RecName: Full=30S ribosomal protein S18
gi|91687319|gb|ABE30519.1| SSU ribosomal protein S18P [Burkholderia xenovorans LB400]
gi|295891972|gb|EFG71756.1| ribosomal protein S18 [Burkholderia sp. Ch1-1]
Length = 91
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G IDYKD+ L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVDHIDYKDLETLKDFIGENGKITPARLTGTKSHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LVPYTD 87
>gi|310815618|ref|YP_003963582.1| ribosomal protein S18 [Ketogulonicigenium vulgare Y25]
gi|308754353|gb|ADO42282.1| ribosomal protein S18 [Ketogulonicigenium vulgare Y25]
Length = 65
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
+A P RR RKS P G+GAP IDYKD RLL R++S+RGKIVP+RI++VS
Sbjct: 1 MATKPFFRR-----RKSDPFEGEGAPVIDYKDTRLLQRYISERGKIVPARITAVS 50
>gi|293604275|ref|ZP_06686682.1| 30S ribosomal protein S18 [Achromobacter piechaudii ATCC 43553]
gi|311105035|ref|YP_003977888.1| 30S ribosomal protein S18 [Achromobacter xylosoxidans A8]
gi|292817152|gb|EFF76226.1| 30S ribosomal protein S18 [Achromobacter piechaudii ATCC 43553]
gi|310759724|gb|ADP15173.1| ribosomal protein S18 [Achromobacter xylosoxidans A8]
gi|317402865|gb|EFV83407.1| 30S ribosomal protein S18 [Achromobacter xylosoxidans C54]
Length = 90
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 22 RRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTKAIYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|295112204|emb|CBL28954.1| SSU ribosomal protein S18P [Synergistetes bacterium SGP1]
Length = 92
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
AP +RR R K C + ++DYKD+ L +++S+RGKIVP R++ K QR
Sbjct: 13 AAPRGGMRRGSKRRPKFCYYCVEKQEKVDYKDVEKLRKYISERGKIVPRRVTGNCAKHQR 72
Query: 64 ELAKAIKRARYLGLIAY 80
L +AIKRARY+ L+ Y
Sbjct: 73 LLTEAIKRARYMALLPY 89
>gi|166030697|ref|ZP_02233526.1| hypothetical protein DORFOR_00371 [Dorea formicigenerans ATCC
27755]
gi|166029489|gb|EDR48246.1| hypothetical protein DORFOR_00371 [Dorea formicigenerans ATCC
27755]
Length = 88
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 11 RRNVSHRRKS-CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RRN RRK C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AI
Sbjct: 15 RRNPGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRALTVAI 74
Query: 70 KRARYLGLIAYV 81
KRAR++ L+ YV
Sbjct: 75 KRARHVALMPYV 86
>gi|120555297|ref|YP_959648.1| 30S ribosomal protein S18 [Marinobacter aquaeolei VT8]
gi|166220958|sp|A1U392|RS18_MARAV RecName: Full=30S ribosomal protein S18
gi|120325146|gb|ABM19461.1| SSU ribosomal protein S18P [Marinobacter aquaeolei VT8]
Length = 76
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|92113017|ref|YP_572945.1| SSU ribosomal protein S18P [Chromohalobacter salexigens DSM 3043]
gi|123084170|sp|Q1QZ62|RS18_CHRSD RecName: Full=30S ribosomal protein S18
gi|91796107|gb|ABE58246.1| SSU ribosomal protein S18P [Chromohalobacter salexigens DSM 3043]
Length = 75
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKDI L ++++ GKIVPSRI+ + QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGVKYIDYKDIDTLKSYITETGKIVPSRITGTKARYQRQLSTAIKRARYLALLPYTD 72
>gi|254417640|ref|ZP_05031374.1| ribosomal protein S18 [Microcoleus chthonoplastes PCC 7420]
gi|196175558|gb|EDX70588.1| ribosomal protein S18 [Microcoleus chthonoplastes PCC 7420]
Length = 71
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR L ++IKRAR L L+ +VN
Sbjct: 14 GEP-IDYKDVELLRKFITERGKILPRRITGLTSQQQRALTRSIKRARLLALLPFVN 68
>gi|226942913|ref|YP_002797986.1| 30S ribosomal protein S18 [Azotobacter vinelandii DJ]
gi|259494801|sp|C1DLR3|RS18_AZOVD RecName: Full=30S ribosomal protein S18
gi|226717840|gb|ACO77011.1| 30S ribosomal protein S18 [Azotobacter vinelandii DJ]
Length = 76
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDFKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|257866284|ref|ZP_05645937.1| ribosomal protein S18 [Enterococcus casseliflavus EC30]
gi|257873200|ref|ZP_05652853.1| ribosomal protein S18 [Enterococcus casseliflavus EC10]
gi|257875901|ref|ZP_05655554.1| ribosomal protein S18 [Enterococcus casseliflavus EC20]
gi|325567633|ref|ZP_08144300.1| 30S ribosomal protein S18 [Enterococcus casseliflavus ATCC 12755]
gi|257800242|gb|EEV29270.1| ribosomal protein S18 [Enterococcus casseliflavus EC30]
gi|257807364|gb|EEV36186.1| ribosomal protein S18 [Enterococcus casseliflavus EC10]
gi|257810067|gb|EEV38887.1| ribosomal protein S18 [Enterococcus casseliflavus EC20]
gi|325159066|gb|EGC71212.1| 30S ribosomal protein S18 [Enterococcus casseliflavus ATCC 12755]
Length = 78
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDIELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLPFVG 76
>gi|325979062|ref|YP_004288778.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178990|emb|CBZ49034.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 79
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RSGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ +VN
Sbjct: 66 RARVMALMPFVN 77
>gi|28872046|ref|NP_794665.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66043849|ref|YP_233690.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae
B728a]
gi|70734082|ref|YP_257722.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf-5]
gi|71735317|ref|YP_272877.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77456763|ref|YP_346268.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf0-1]
gi|213967934|ref|ZP_03396080.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato T1]
gi|229588087|ref|YP_002870206.1| 30S ribosomal protein S18 [Pseudomonas fluorescens SBW25]
gi|237798288|ref|ZP_04586749.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257482398|ref|ZP_05636439.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289624607|ref|ZP_06457561.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648617|ref|ZP_06479960.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484905|ref|ZP_07003004.1| SSU ribosomal protein S18p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|301383749|ref|ZP_07232167.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato Max13]
gi|302059276|ref|ZP_07250817.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato K40]
gi|302132344|ref|ZP_07258334.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302185450|ref|ZP_07262123.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae 642]
gi|330807241|ref|YP_004351703.1| 30S ribosomal protein S18 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|38258466|sp|Q87VK4|RS18_PSESM RecName: Full=30S ribosomal protein S18
gi|81308571|sp|Q4ZYX0|RS18_PSEU2 RecName: Full=30S ribosomal protein S18
gi|123606171|sp|Q3KIX7|RS18_PSEPF RecName: Full=30S ribosomal protein S18
gi|123734036|sp|Q48NZ2|RS18_PSE14 RecName: Full=30S ribosomal protein S18
gi|123748561|sp|Q4KJ61|RS18_PSEF5 RecName: Full=30S ribosomal protein S18
gi|259494816|sp|C3KE68|RS18_PSEFS RecName: Full=30S ribosomal protein S18
gi|28855299|gb|AAO58360.1| ribosomal protein S18 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|63254556|gb|AAY35652.1| Ribosomal protein S18 [Pseudomonas syringae pv. syringae B728a]
gi|68348381|gb|AAY95987.1| ribosomal protein S18 [Pseudomonas fluorescens Pf-5]
gi|71555870|gb|AAZ35081.1| ribosomal protein S18 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77380766|gb|ABA72279.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf0-1]
gi|213927277|gb|EEB60826.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato T1]
gi|229359953|emb|CAY46807.1| 30S ribosomal protein S18 [Pseudomonas fluorescens SBW25]
gi|298160592|gb|EFI01614.1| SSU ribosomal protein S18p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320321873|gb|EFW77969.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331022|gb|EFW86996.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|327375349|gb|AEA66699.1| 30S ribosomal protein S18 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|330865905|gb|EGH00614.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330872264|gb|EGH06413.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330873775|gb|EGH07924.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330886612|gb|EGH20273.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. mori str.
301020]
gi|330899906|gb|EGH31325.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330939890|gb|EGH43112.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. pisi str.
1704B]
gi|330951488|gb|EGH51748.1| 30S ribosomal protein S18 [Pseudomonas syringae Cit 7]
gi|330960078|gb|EGH60338.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330965992|gb|EGH66252.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330971571|gb|EGH71637.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330978936|gb|EGH77995.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330984550|gb|EGH82653.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009772|gb|EGH89828.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331014621|gb|EGH94677.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331021140|gb|EGI01197.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 76
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 14 TAEDVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|90020705|ref|YP_526532.1| 30S ribosomal protein S18 [Saccharophagus degradans 2-40]
gi|122996417|sp|Q21LV9|RS18_SACD2 RecName: Full=30S ribosomal protein S18
gi|89950305|gb|ABD80320.1| SSU ribosomal protein S18P [Saccharophagus degradans 2-40]
Length = 75
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRAR++ L+ Y +
Sbjct: 14 TAEGVKSIDYKDLDTLKAYVSETGKIVPSRITGTKAKYQRQLATAIKRARFIALLPYTD 72
>gi|209520395|ref|ZP_03269158.1| ribosomal protein S18 [Burkholderia sp. H160]
gi|295676424|ref|YP_003604948.1| ribosomal protein S18 [Burkholderia sp. CCGE1002]
gi|209499180|gb|EDZ99272.1| ribosomal protein S18 [Burkholderia sp. H160]
gi|295436267|gb|ADG15437.1| ribosomal protein S18 [Burkholderia sp. CCGE1002]
Length = 91
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G IDYKDI L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LMPYTD 87
>gi|289672603|ref|ZP_06493493.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae FF5]
Length = 76
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 14 TAEDVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|255066238|ref|ZP_05318093.1| ribosomal protein S18 [Neisseria sicca ATCC 29256]
gi|255049448|gb|EET44912.1| ribosomal protein S18 [Neisseria sicca ATCC 29256]
Length = 76
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + +D+K + LL F+S+ GKI+P+RI+ QR+LA A+KRAR+L
Sbjct: 8 RRKFCRFTAEKIQEVDHKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAVKRARFLA 67
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 68 LLPYTD 73
>gi|331700406|ref|YP_004397365.1| 30S ribosomal protein S18 [Lactobacillus buchneri NRRL B-30929]
gi|329127749|gb|AEB72302.1| 30S ribosomal protein S18 [Lactobacillus buchneri NRRL B-30929]
Length = 79
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKDI LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+ +V
Sbjct: 26 IDYKDIDLLKRFVSERGKILPRRVTGTSAKNQRALTIAIKRARIMGLMPFV 76
>gi|317969855|ref|ZP_07971245.1| 30S ribosomal protein S18 [Synechococcus sp. CB0205]
Length = 73
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GEP-IDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARIVALLPFVN 70
>gi|187777390|ref|ZP_02993863.1| hypothetical protein CLOSPO_00946 [Clostridium sporogenes ATCC
15579]
gi|187774318|gb|EDU38120.1| hypothetical protein CLOSPO_00946 [Clostridium sporogenes ATCC
15579]
Length = 80
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + + IDYKDI L +F+++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 14 KRKVCTFCMEKSEAIDYKDINKLRKFVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|40062773|gb|AAR37667.1| ribosomal protein S18 [uncultured marine bacterium 439]
Length = 85
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 9 LLRRNVSHRRKS-------CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ ++ V+ RRK C + G IDYKD+ +L + + GKI PSRI+ S K
Sbjct: 1 MAKKQVTKRRKFQIPINRFCRFTKAGFKEIDYKDVDILLKNIDDSGKITPSRITGTSAKF 60
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR+L LI Y +
Sbjct: 61 QRQLTTAIKRARFLALIPYTD 81
>gi|218282110|ref|ZP_03488409.1| hypothetical protein EUBIFOR_00984 [Eubacterium biforme DSM 3989]
gi|218216903|gb|EEC90441.1| hypothetical protein EUBIFOR_00984 [Eubacterium biforme DSM 3989]
Length = 76
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ LL RF++ GKI+P R++ K QR LA AIKRAR +
Sbjct: 10 RKKVCYFTKNKIKEIDYKDVELLKRFINANGKIIPRRVTGTRAKYQRMLATAIKRARQMA 69
Query: 77 LIAYV 81
L+ YV
Sbjct: 70 LLPYV 74
>gi|94501371|ref|ZP_01307891.1| ribosomal protein S18 [Oceanobacter sp. RED65]
gi|94426484|gb|EAT11472.1| ribosomal protein S18 [Oceanobacter sp. RED65]
Length = 75
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ K QR+L+ AIKRARY+ L+ Y +
Sbjct: 14 TAEGVDQIDYKDLDTLKGYITETGKIVPSRITGTKAKYQRQLSSAIKRARYVALLPYTD 72
>gi|318041407|ref|ZP_07973363.1| 30S ribosomal protein S18 [Synechococcus sp. CB0101]
Length = 73
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARIVALLPFVN 70
>gi|307546115|ref|YP_003898594.1| 30S ribosomal protein S18 [Halomonas elongata DSM 2581]
gi|307218139|emb|CBV43409.1| 30S ribosomal protein S18 [Halomonas elongata DSM 2581]
Length = 75
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ + QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLDTLKAYVTETGKIVPSRITGTKARYQRQLSTAIKRARYLALLPYTD 72
>gi|238855514|ref|ZP_04645819.1| ribosomal protein S18 [Lactobacillus jensenii 269-3]
gi|256851682|ref|ZP_05557070.1| ribosomal protein S18 [Lactobacillus jensenii 27-2-CHN]
gi|260661601|ref|ZP_05862513.1| ribosomal protein S18 [Lactobacillus jensenii 115-3-CHN]
gi|260665218|ref|ZP_05866067.1| ribosomal protein S18 [Lactobacillus jensenii SJ-7A-US]
gi|282931540|ref|ZP_06337039.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|282934234|ref|ZP_06339511.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|297205291|ref|ZP_06922687.1| 30S ribosomal protein S18 [Lactobacillus jensenii JV-V16]
gi|313472771|ref|ZP_07813259.1| ribosomal protein S18 [Lactobacillus jensenii 1153]
gi|238831880|gb|EEQ24212.1| ribosomal protein S18 [Lactobacillus jensenii 269-3]
gi|239529058|gb|EEQ68059.1| ribosomal protein S18 [Lactobacillus jensenii 1153]
gi|256615640|gb|EEU20829.1| ribosomal protein S18 [Lactobacillus jensenii 27-2-CHN]
gi|260547658|gb|EEX23636.1| ribosomal protein S18 [Lactobacillus jensenii 115-3-CHN]
gi|260560955|gb|EEX26930.1| ribosomal protein S18 [Lactobacillus jensenii SJ-7A-US]
gi|281301708|gb|EFA93975.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|281304347|gb|EFA96450.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|297149869|gb|EFH30166.1| 30S ribosomal protein S18 [Lactobacillus jensenii JV-V16]
Length = 78
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLPFV 75
>gi|312958664|ref|ZP_07773184.1| 30S ribosomal protein S18 [Pseudomonas fluorescens WH6]
gi|311287207|gb|EFQ65768.1| 30S ribosomal protein S18 [Pseudomonas fluorescens WH6]
Length = 76
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 21 IDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|146319486|ref|YP_001199198.1| 30S ribosomal protein S18 [Streptococcus suis 05ZYH33]
gi|146321678|ref|YP_001201389.1| 30S ribosomal protein S18 [Streptococcus suis 98HAH33]
gi|223934218|ref|ZP_03626153.1| ribosomal protein S18 [Streptococcus suis 89/1591]
gi|253752497|ref|YP_003025638.1| 30S ribosomal protein S18 [Streptococcus suis SC84]
gi|253754323|ref|YP_003027464.1| 30S ribosomal protein S18 [Streptococcus suis P1/7]
gi|253756257|ref|YP_003029397.1| 30S ribosomal protein S18 [Streptococcus suis BM407]
gi|302024436|ref|ZP_07249647.1| 30S ribosomal protein S18 [Streptococcus suis 05HAS68]
gi|330833440|ref|YP_004402265.1| 30S ribosomal protein S18 [Streptococcus suis ST3]
gi|166222247|sp|A4W3Q0|RS18_STRS2 RecName: Full=30S ribosomal protein S18
gi|166222249|sp|A4VXF9|RS18_STRSY RecName: Full=30S ribosomal protein S18
gi|145690292|gb|ABP90798.1| 30S ribosomal protein S18 [Streptococcus suis 05ZYH33]
gi|145692484|gb|ABP92989.1| 30S ribosomal protein S18 [Streptococcus suis 98HAH33]
gi|223897115|gb|EEF63541.1| ribosomal protein S18 [Streptococcus suis 89/1591]
gi|251816786|emb|CAZ52429.1| 30S ribosomal protein S18 [Streptococcus suis SC84]
gi|251818721|emb|CAZ56557.1| 30S ribosomal protein S18 [Streptococcus suis BM407]
gi|251820569|emb|CAR47325.1| 30S ribosomal protein S18 [Streptococcus suis P1/7]
gi|292559103|gb|ADE32104.1| 30S ribosomal protein S18 [Streptococcus suis GZ1]
gi|319758905|gb|ADV70847.1| 30S ribosomal protein S18 [Streptococcus suis JS14]
gi|329307663|gb|AEB82079.1| 30S ribosomal protein S18 [Streptococcus suis ST3]
Length = 79
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFISERGKILPRRVTGTSAKNQRKVTTAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ +VN
Sbjct: 65 KRARVMALLPFVN 77
>gi|254520716|ref|ZP_05132772.1| ribosomal protein S18 [Clostridium sp. 7_2_43FAA]
gi|226914465|gb|EEH99666.1| ribosomal protein S18 [Clostridium sp. 7_2_43FAA]
Length = 80
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + A IDYKDI L +F+++RGKI+P RIS K QREL AIKR+R +
Sbjct: 14 KRKVCAFCVEKAEAIDYKDITKLRKFVTERGKILPRRISGTCAKHQRELTTAIKRSRNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|33861426|ref|NP_892987.1| 30S ribosomal protein S18 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|78779316|ref|YP_397428.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9312]
gi|123966183|ref|YP_001011264.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9515]
gi|123968526|ref|YP_001009384.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. AS9601]
gi|126696329|ref|YP_001091215.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9301]
gi|157413359|ref|YP_001484225.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9215]
gi|254525976|ref|ZP_05138028.1| ribosomal protein S18 [Prochlorococcus marinus str. MIT 9202]
gi|59798835|sp|Q7TUA0|RS18_PROMP RecName: Full=30S ribosomal protein S18
gi|123741464|sp|Q31AV3|RS18_PROM9 RecName: Full=30S ribosomal protein S18
gi|166220970|sp|A3PCY9|RS18_PROM0 RecName: Full=30S ribosomal protein S18
gi|166220973|sp|A2BWJ6|RS18_PROM5 RecName: Full=30S ribosomal protein S18
gi|166220974|sp|A2BR66|RS18_PROMS RecName: Full=30S ribosomal protein S18
gi|167011192|sp|A8G4V8|RS18_PROM2 RecName: Full=30S ribosomal protein S18
gi|33634003|emb|CAE19328.1| 30S Ribosomal protein S18 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|78712815|gb|ABB49992.1| SSU ribosomal protein S18P [Prochlorococcus marinus str. MIT
9312]
gi|123198636|gb|ABM70277.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. AS9601]
gi|123200549|gb|ABM72157.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9515]
gi|126543372|gb|ABO17614.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9301]
gi|157387934|gb|ABV50639.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9215]
gi|221537400|gb|EEE39853.1| ribosomal protein S18 [Prochlorococcus marinus str. MIT 9202]
Length = 73
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVELLKKFITERGKILPRRMTGLTSKQQRDLTLAVKRARIVALLPFVN 70
>gi|210624078|ref|ZP_03294178.1| hypothetical protein CLOHIR_02130 [Clostridium hiranonis DSM
13275]
gi|210153211|gb|EEA84217.1| hypothetical protein CLOHIR_02130 [Clostridium hiranonis DSM
13275]
Length = 74
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYKD + L R++++RGKI+P RIS K QREL KAIKRAR + L+ Y
Sbjct: 12 CQFCADKNAKIDYKDTQRLQRYVTERGKILPRRISGTCAKHQRELTKAIKRARNIALLPY 71
Query: 81 V 81
Sbjct: 72 T 72
>gi|33593750|ref|NP_881394.1| 30S ribosomal protein S18 [Bordetella pertussis Tohama I]
gi|33597056|ref|NP_884699.1| 30S ribosomal protein S18 [Bordetella parapertussis 12822]
gi|33600901|ref|NP_888461.1| 30S ribosomal protein S18 [Bordetella bronchiseptica RB50]
gi|59798865|sp|Q7VV91|RS18_BORPE RecName: Full=30S ribosomal protein S18
gi|59798870|sp|Q7W7P6|RS18_BORPA RecName: Full=30S ribosomal protein S18
gi|59798872|sp|Q7WL33|RS18_BORBR RecName: Full=30S ribosomal protein S18
gi|33563823|emb|CAE43067.1| 30s ribosomal protein s18 [Bordetella pertussis Tohama I]
gi|33566507|emb|CAE37763.1| 30s ribosomal protein s18 [Bordetella parapertussis]
gi|33568501|emb|CAE32413.1| 30s ribosomal protein s18 [Bordetella bronchiseptica RB50]
gi|332383152|gb|AEE67999.1| 30S ribosomal protein S18 [Bordetella pertussis CS]
Length = 90
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 22 RRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTRAIYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|197302887|ref|ZP_03167939.1| hypothetical protein RUMLAC_01616 [Ruminococcus lactaris ATCC
29176]
gi|197298124|gb|EDY32672.1| hypothetical protein RUMLAC_01616 [Ruminococcus lactaris ATCC
29176]
Length = 88
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
V R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR
Sbjct: 19 VRRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRAR 78
Query: 74 YLGLIAYVN 82
++ L+ YV
Sbjct: 79 HISLMPYVQ 87
>gi|332639079|ref|ZP_08417942.1| 30S ribosomal protein S18 [Weissella cibaria KACC 11862]
Length = 80
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD LL RF+S+RGKI+P R++ S K QR++ AIKRAR +GL+ +V
Sbjct: 27 VDYKDTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARVMGLLPFV 77
>gi|33865759|ref|NP_897318.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102]
gi|78184710|ref|YP_377145.1| 30S ribosomal protein S18 [Synechococcus sp. CC9902]
gi|78212867|ref|YP_381646.1| 30S ribosomal protein S18 [Synechococcus sp. CC9605]
gi|87124491|ref|ZP_01080340.1| ribosomal protein S18 [Synechococcus sp. RS9917]
gi|88808524|ref|ZP_01124034.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805]
gi|113953413|ref|YP_730544.1| 30S ribosomal protein S18 [Synechococcus sp. CC9311]
gi|116070581|ref|ZP_01467850.1| 30S ribosomal protein S18 [Synechococcus sp. BL107]
gi|148239628|ref|YP_001225015.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803]
gi|194476530|ref|YP_002048709.1| 30S ribosomal protein S18 [Paulinella chromatophora]
gi|254430586|ref|ZP_05044289.1| ribosomal protein S18 [Cyanobium sp. PCC 7001]
gi|260436039|ref|ZP_05790009.1| ribosomal protein S18 [Synechococcus sp. WH 8109]
gi|59798843|sp|Q7U6W1|RS18_SYNPX RecName: Full=30S ribosomal protein S18
gi|123327838|sp|Q0IAH8|RS18_SYNS3 RecName: Full=30S ribosomal protein S18
gi|123743319|sp|Q3AJZ1|RS18_SYNSC RecName: Full=30S ribosomal protein S18
gi|123743504|sp|Q3AVJ4|RS18_SYNS9 RecName: Full=30S ribosomal protein S18
gi|166222251|sp|A5GLA3|RS18_SYNPW RecName: Full=30S ribosomal protein S18
gi|205831408|sp|B1X3I0|RR18_PAUCH RecName: Full=30S ribosomal protein S18, organellar chromatophore
gi|33632929|emb|CAE07740.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102]
gi|78169004|gb|ABB26101.1| SSU ribosomal protein S18P [Synechococcus sp. CC9902]
gi|78197326|gb|ABB35091.1| ribosomal protein S18 [Synechococcus sp. CC9605]
gi|86168063|gb|EAQ69321.1| ribosomal protein S18 [Synechococcus sp. RS9917]
gi|88787512|gb|EAR18669.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805]
gi|113880764|gb|ABI45722.1| ribosomal protein S18 [Synechococcus sp. CC9311]
gi|116065986|gb|EAU71743.1| 30S ribosomal protein S18 [Synechococcus sp. BL107]
gi|147848167|emb|CAK23718.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803]
gi|171191537|gb|ACB42499.1| 30S ribosomal protein S18 [Paulinella chromatophora]
gi|197625039|gb|EDY37598.1| ribosomal protein S18 [Cyanobium sp. PCC 7001]
gi|260413913|gb|EEX07209.1| ribosomal protein S18 [Synechococcus sp. WH 8109]
Length = 73
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARIVALLPFVN 70
>gi|187478663|ref|YP_786687.1| 30S ribosomal protein S18 [Bordetella avium 197N]
gi|123725072|sp|Q2KZ21|RS18_BORA1 RecName: Full=30S ribosomal protein S18
gi|115423249|emb|CAJ49782.1| 30S ribosomal protein S18 [Bordetella avium 197N]
Length = 90
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 22 RRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTRAIYQRQLDSAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|42520621|ref|NP_966536.1| 30S ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58698590|ref|ZP_00373488.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99034686|ref|ZP_01314626.1| hypothetical protein Wendoof_01000557 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630395|ref|YP_002727186.1| ribosomal protein S18 [Wolbachia sp. wRi]
gi|59798787|sp|Q73GZ6|RS18_WOLPM RecName: Full=30S ribosomal protein S18
gi|254812966|sp|C0R3A3|RS18_WOLWR RecName: Full=30S ribosomal protein S18
gi|42410360|gb|AAS14470.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58534886|gb|EAL58987.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592376|gb|ACN95395.1| ribosomal protein S18 [Wolbachia sp. wRi]
Length = 91
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K CPL+ IDYK+I LL++F S G+I+P R++ V KKQR+L AI RAR+L
Sbjct: 23 RSKVCPLAASKDEDIDYKNIDLLSKFTSDYGRILPRRLTGVCAKKQRKLRLAIIRARFLA 82
Query: 77 LIAYV 81
LI Y
Sbjct: 83 LIPYC 87
>gi|15901383|ref|NP_345987.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TIGR4]
gi|15903437|ref|NP_358987.1| 30S ribosomal protein S18 [Streptococcus pneumoniae R6]
gi|24380218|ref|NP_722173.1| 30S ribosomal protein S18 [Streptococcus mutans UA159]
gi|111658382|ref|ZP_01409069.1| hypothetical protein SpneT_02000461 [Streptococcus pneumoniae
TIGR4]
gi|116516750|ref|YP_816828.1| 30S ribosomal protein S18 [Streptococcus pneumoniae D39]
gi|125717306|ref|YP_001034439.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK36]
gi|148984887|ref|ZP_01818140.1| hypothetical protein CGSSp3BS71_09631 [Streptococcus pneumoniae
SP3-BS71]
gi|148988585|ref|ZP_01820018.1| hypothetical protein CGSSp6BS73_08674 [Streptococcus pneumoniae
SP6-BS73]
gi|148992571|ref|ZP_01822239.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP9-BS68]
gi|148997397|ref|ZP_01825002.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP11-BS70]
gi|149003239|ref|ZP_01828135.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP14-BS69]
gi|149007548|ref|ZP_01831183.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP18-BS74]
gi|149011777|ref|ZP_01832973.1| hypothetical protein CGSSp19BS75_07412 [Streptococcus pneumoniae
SP19-BS75]
gi|149021813|ref|ZP_01835820.1| hypothetical protein CGSSp23BS72_09623 [Streptococcus pneumoniae
SP23-BS72]
gi|157150434|ref|YP_001451145.1| 30S ribosomal protein S18 [Streptococcus gordonii str. Challis
substr. CH1]
gi|168484972|ref|ZP_02709917.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1873-00]
gi|168487509|ref|ZP_02712017.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1087-00]
gi|168488799|ref|ZP_02712998.1| ribosomal protein S18 [Streptococcus pneumoniae SP195]
gi|168491569|ref|ZP_02715712.1| ribosomal protein S18 [Streptococcus pneumoniae CDC0288-04]
gi|168493440|ref|ZP_02717583.1| ribosomal protein S18 [Streptococcus pneumoniae CDC3059-06]
gi|168575265|ref|ZP_02721228.1| ribosomal protein S18 [Streptococcus pneumoniae MLV-016]
gi|169832520|ref|YP_001694944.1| 30S ribosomal protein S18 [Streptococcus pneumoniae Hungary19A-6]
gi|171779262|ref|ZP_02920233.1| hypothetical protein STRINF_01110 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|182684495|ref|YP_001836242.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CGSP14]
gi|221232250|ref|YP_002511403.1| 30S ribosomal protein S18 [Streptococcus pneumoniae ATCC 700669]
gi|225854979|ref|YP_002736491.1| 30S ribosomal protein S18 [Streptococcus pneumoniae JJA]
gi|225857165|ref|YP_002738676.1| 30S ribosomal protein S18 [Streptococcus pneumoniae P1031]
gi|225859294|ref|YP_002740804.1| 30S ribosomal protein S18 [Streptococcus pneumoniae 70585]
gi|225861370|ref|YP_002742879.1| 30S ribosomal protein S18 [Streptococcus pneumoniae Taiwan19F-14]
gi|237650221|ref|ZP_04524473.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CCRI 1974]
gi|237820896|ref|ZP_04596741.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CCRI 1974M2]
gi|262283523|ref|ZP_06061289.1| ribosomal protein S18 [Streptococcus sp. 2_1_36FAA]
gi|270292432|ref|ZP_06198643.1| ribosomal protein S18 [Streptococcus sp. M143]
gi|288906099|ref|YP_003431321.1| ribosomal protein S18 [Streptococcus gallolyticus UCN34]
gi|289168354|ref|YP_003446623.1| 30S ribosomal protein S18 [Streptococcus mitis B6]
gi|290579807|ref|YP_003484199.1| 30S ribosomal protein S18 [Streptococcus mutans NN2025]
gi|293365826|ref|ZP_06612531.1| 30S ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|296875865|ref|ZP_06899926.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC
15912]
gi|298230728|ref|ZP_06964409.1| 30S ribosomal protein S18 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254951|ref|ZP_06978537.1| 30S ribosomal protein S18 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503275|ref|YP_003725215.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TCH8431/19A]
gi|303255325|ref|ZP_07341395.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS455]
gi|303260166|ref|ZP_07346138.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP-BS293]
gi|303262556|ref|ZP_07348497.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP14-BS292]
gi|303264958|ref|ZP_07350873.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS397]
gi|303266421|ref|ZP_07352309.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS457]
gi|303269403|ref|ZP_07355173.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS458]
gi|306824869|ref|ZP_07458213.1| 30S ribosomal protein S18 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306829849|ref|ZP_07463036.1| 30S ribosomal protein S18 [Streptococcus mitis ATCC 6249]
gi|306832138|ref|ZP_07465292.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834252|ref|ZP_07467371.1| 30S ribosomal protein S18 [Streptococcus bovis ATCC 700338]
gi|307068183|ref|YP_003877149.1| hypothetical protein SPAP_1561 [Streptococcus pneumoniae AP200]
gi|307127747|ref|YP_003879778.1| 30S ribosomal protein S18 [Streptococcus pneumoniae 670-6B]
gi|307703305|ref|ZP_07640250.1| ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|307704416|ref|ZP_07641328.1| ribosomal protein S18 [Streptococcus mitis SK597]
gi|307705993|ref|ZP_07642816.1| ribosomal protein S18 [Streptococcus mitis SK564]
gi|307706202|ref|ZP_07643019.1| ribosomal protein S18 [Streptococcus mitis SK321]
gi|307708378|ref|ZP_07644845.1| ribosomal protein S18 [Streptococcus mitis NCTC 12261]
gi|309798591|ref|ZP_07692866.1| ribosomal protein S18 [Streptococcus infantis SK1302]
gi|312864919|ref|ZP_07725149.1| ribosomal protein S18 [Streptococcus downei F0415]
gi|312868477|ref|ZP_07728677.1| ribosomal protein S18 [Streptococcus parasanguinis F0405]
gi|315222303|ref|ZP_07864209.1| ribosomal protein S18 [Streptococcus anginosus F0211]
gi|315613509|ref|ZP_07888416.1| 30S ribosomal protein S18 [Streptococcus sanguinis ATCC 49296]
gi|319939919|ref|ZP_08014274.1| 30S ribosomal protein S18 [Streptococcus anginosus 1_2_62CV]
gi|319946353|ref|ZP_08020591.1| 30S ribosomal protein S18 [Streptococcus australis ATCC 700641]
gi|320547485|ref|ZP_08041771.1| 30S ribosomal protein S18 [Streptococcus equinus ATCC 9812]
gi|322373706|ref|ZP_08048242.1| ribosomal protein S18 [Streptococcus sp. C150]
gi|322375590|ref|ZP_08050102.1| ribosomal protein S18 [Streptococcus sp. C300]
gi|322377026|ref|ZP_08051519.1| ribosomal protein S18 [Streptococcus sp. M334]
gi|322386752|ref|ZP_08060376.1| 30S ribosomal protein S18 [Streptococcus cristatus ATCC 51100]
gi|322387422|ref|ZP_08061032.1| 30S ribosomal protein S18 [Streptococcus infantis ATCC 700779]
gi|322390175|ref|ZP_08063707.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC 903]
gi|322391659|ref|ZP_08065127.1| 30S ribosomal protein S18 [Streptococcus peroris ATCC 700780]
gi|323353389|ref|ZP_08087922.1| 30S ribosomal protein S18 [Streptococcus sanguinis VMC66]
gi|331266016|ref|YP_004325646.1| 30S ribosomal protein S18 [Streptococcus oralis Uo5]
gi|54039416|sp|P66473|RS18_STRR6 RecName: Full=30S ribosomal protein S18
gi|54039417|sp|P66474|RS18_STRMU RecName: Full=30S ribosomal protein S18
gi|54042150|sp|P66472|RS18_STRPN RecName: Full=30S ribosomal protein S18
gi|122278326|sp|Q04JL0|RS18_STRP2 RecName: Full=30S ribosomal protein S18
gi|166222248|sp|A3CL34|RS18_STRSV RecName: Full=30S ribosomal protein S18
gi|189029694|sp|A8AZD5|RS18_STRGC RecName: Full=30S ribosomal protein S18
gi|229560071|sp|B1ICV9|RS18_STRPI RecName: Full=30S ribosomal protein S18
gi|229560072|sp|B2IR58|RS18_STRPS RecName: Full=30S ribosomal protein S18
gi|254812957|sp|C1C8C8|RS18_STRP7 RecName: Full=30S ribosomal protein S18
gi|254812958|sp|B8ZLD9|RS18_STRPJ RecName: Full=30S ribosomal protein S18
gi|254812960|sp|C1CFC0|RS18_STRZJ RecName: Full=30S ribosomal protein S18
gi|254812961|sp|C1CLN8|RS18_STRZP RecName: Full=30S ribosomal protein S18
gi|254812962|sp|C1CSF7|RS18_STRZT RecName: Full=30S ribosomal protein S18
gi|24378225|gb|AAN59479.1|AE015012_8 30S ribosomal protein S18 [Streptococcus mutans UA159]
gi|14973029|gb|AAK75627.1| ribosomal protein S18 [Streptococcus pneumoniae TIGR4]
gi|15459045|gb|AAL00198.1| 30S Ribosomal protein S18 [Streptococcus pneumoniae R6]
gi|116077326|gb|ABJ55046.1| ribosomal protein S18 [Streptococcus pneumoniae D39]
gi|125497223|gb|ABN43889.1| 30S ribosomal protein S18, putative [Streptococcus sanguinis
SK36]
gi|147756452|gb|EDK63493.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP11-BS70]
gi|147758699|gb|EDK65696.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP14-BS69]
gi|147760907|gb|EDK67877.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP18-BS74]
gi|147764208|gb|EDK71140.1| hypothetical protein CGSSp19BS75_07412 [Streptococcus pneumoniae
SP19-BS75]
gi|147922909|gb|EDK74025.1| hypothetical protein CGSSp3BS71_09631 [Streptococcus pneumoniae
SP3-BS71]
gi|147925786|gb|EDK76861.1| hypothetical protein CGSSp6BS73_08674 [Streptococcus pneumoniae
SP6-BS73]
gi|147928588|gb|EDK79602.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP9-BS68]
gi|147930049|gb|EDK81036.1| hypothetical protein CGSSp23BS72_09623 [Streptococcus pneumoniae
SP23-BS72]
gi|157075228|gb|ABV09911.1| ribosomal protein S18 [Streptococcus gordonii str. Challis
substr. CH1]
gi|168995022|gb|ACA35634.1| ribosomal protein S18 [Streptococcus pneumoniae Hungary19A-6]
gi|171282318|gb|EDT47745.1| hypothetical protein STRINF_01110 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|172041899|gb|EDT49945.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1873-00]
gi|182629829|gb|ACB90777.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CGSP14]
gi|183569672|gb|EDT90200.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1087-00]
gi|183572611|gb|EDT93139.1| ribosomal protein S18 [Streptococcus pneumoniae SP195]
gi|183574282|gb|EDT94810.1| ribosomal protein S18 [Streptococcus pneumoniae CDC0288-04]
gi|183576411|gb|EDT96939.1| ribosomal protein S18 [Streptococcus pneumoniae CDC3059-06]
gi|183578889|gb|EDT99417.1| ribosomal protein S18 [Streptococcus pneumoniae MLV-016]
gi|220674711|emb|CAR69284.1| 30S ribosomal protein S18 [Streptococcus pneumoniae ATCC 700669]
gi|225721900|gb|ACO17754.1| ribosomal protein S18 [Streptococcus pneumoniae 70585]
gi|225723663|gb|ACO19516.1| ribosomal protein S18 [Streptococcus pneumoniae JJA]
gi|225724494|gb|ACO20346.1| ribosomal protein S18 [Streptococcus pneumoniae P1031]
gi|225728310|gb|ACO24161.1| ribosomal protein S18 [Streptococcus pneumoniae Taiwan19F-14]
gi|254996706|dbj|BAH87307.1| 30S ribosomal protein S18 [Streptococcus mutans NN2025]
gi|262261014|gb|EEY79714.1| ribosomal protein S18 [Streptococcus sp. 2_1_36FAA]
gi|270278411|gb|EFA24257.1| ribosomal protein S18 [Streptococcus sp. M143]
gi|288732825|emb|CBI14401.1| ribosomal protein S18 [Streptococcus gallolyticus UCN34]
gi|288907921|emb|CBJ22761.1| 30S ribosomal protein S18 [Streptococcus mitis B6]
gi|291315650|gb|EFE56098.1| 30S ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|296433106|gb|EFH18892.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC
15912]
gi|298238870|gb|ADI70001.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TCH8431/19A]
gi|301794548|emb|CBW36992.1| 30S ribosomal protein S18 [Streptococcus pneumoniae INV104]
gi|301800372|emb|CBW33003.1| 30S ribosomal protein S18 [Streptococcus pneumoniae OXC141]
gi|301802257|emb|CBW35009.1| 30S ribosomal protein S18 [Streptococcus pneumoniae INV200]
gi|302597693|gb|EFL64769.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS455]
gi|302636273|gb|EFL66767.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP14-BS292]
gi|302638663|gb|EFL69126.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP-BS293]
gi|302641071|gb|EFL71448.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS458]
gi|302643999|gb|EFL74258.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS457]
gi|302645477|gb|EFL75709.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS397]
gi|304423601|gb|EFM26748.1| 30S ribosomal protein S18 [Streptococcus bovis ATCC 700338]
gi|304425577|gb|EFM28695.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427860|gb|EFM30953.1| 30S ribosomal protein S18 [Streptococcus mitis ATCC 6249]
gi|304433080|gb|EFM36052.1| 30S ribosomal protein S18 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306409720|gb|ADM85147.1| hypothetical protein SPAP_1561 [Streptococcus pneumoniae AP200]
gi|306484809|gb|ADM91678.1| ribosomal protein S18 [Streptococcus pneumoniae 670-6B]
gi|307615824|gb|EFN95030.1| ribosomal protein S18 [Streptococcus mitis NCTC 12261]
gi|307618392|gb|EFN97542.1| ribosomal protein S18 [Streptococcus mitis SK321]
gi|307620412|gb|EFN99525.1| ribosomal protein S18 [Streptococcus mitis SK564]
gi|307622029|gb|EFO01054.1| ribosomal protein S18 [Streptococcus mitis SK597]
gi|307623171|gb|EFO02163.1| ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|308117827|gb|EFO55228.1| ribosomal protein S18 [Streptococcus infantis SK1302]
gi|311096222|gb|EFQ54466.1| ribosomal protein S18 [Streptococcus parasanguinis F0405]
gi|311099539|gb|EFQ57753.1| ribosomal protein S18 [Streptococcus downei F0415]
gi|315188636|gb|EFU22345.1| ribosomal protein S18 [Streptococcus anginosus F0211]
gi|315314200|gb|EFU62245.1| 30S ribosomal protein S18 [Streptococcus sanguinis ATCC 49296]
gi|319747506|gb|EFV99761.1| 30S ribosomal protein S18 [Streptococcus australis ATCC 700641]
gi|319810930|gb|EFW07249.1| 30S ribosomal protein S18 [Streptococcus anginosus 1_2_62CV]
gi|320447830|gb|EFW88587.1| 30S ribosomal protein S18 [Streptococcus equinus ATCC 9812]
gi|321141951|gb|EFX37446.1| 30S ribosomal protein S18 [Streptococcus infantis ATCC 700779]
gi|321143135|gb|EFX38581.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC 903]
gi|321145470|gb|EFX40863.1| 30S ribosomal protein S18 [Streptococcus peroris ATCC 700780]
gi|321269034|gb|EFX51970.1| 30S ribosomal protein S18 [Streptococcus cristatus ATCC 51100]
gi|321278748|gb|EFX55817.1| ribosomal protein S18 [Streptococcus sp. C150]
gi|321279298|gb|EFX56339.1| ribosomal protein S18 [Streptococcus sp. C300]
gi|321282833|gb|EFX59840.1| ribosomal protein S18 [Streptococcus sp. M334]
gi|322121335|gb|EFX93098.1| 30S ribosomal protein S18 [Streptococcus sanguinis VMC66]
gi|324990242|gb|EGC22180.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK353]
gi|324992066|gb|EGC23988.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK405]
gi|324994159|gb|EGC26073.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK678]
gi|325688012|gb|EGD30031.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK72]
gi|325690403|gb|EGD32407.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK115]
gi|325693669|gb|EGD35588.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK150]
gi|325697625|gb|EGD39510.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK160]
gi|326682688|emb|CBZ00305.1| 30S ribosomal protein S18 [Streptococcus oralis Uo5]
gi|327389725|gb|EGE88070.1| ribosomal protein S18 [Streptococcus pneumoniae GA04375]
gi|327458971|gb|EGF05319.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1057]
gi|327459368|gb|EGF05714.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1]
gi|327469240|gb|EGF14712.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK330]
gi|327472789|gb|EGF18216.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK408]
gi|327490584|gb|EGF22365.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1058]
gi|328945789|gb|EGG39940.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1087]
gi|332072332|gb|EGI82815.1| ribosomal protein S18 [Streptococcus pneumoniae GA17570]
gi|332073877|gb|EGI84355.1| ribosomal protein S18 [Streptococcus pneumoniae GA41301]
gi|332074294|gb|EGI84771.1| ribosomal protein S18 [Streptococcus pneumoniae GA17545]
gi|332199584|gb|EGJ13659.1| ribosomal protein S18 [Streptococcus pneumoniae GA41317]
gi|332200101|gb|EGJ14174.1| ribosomal protein S18 [Streptococcus pneumoniae GA47368]
gi|332200980|gb|EGJ15051.1| ribosomal protein S18 [Streptococcus pneumoniae GA47901]
gi|332357976|gb|EGJ35809.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1056]
gi|332363248|gb|EGJ41033.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK49]
gi|332363798|gb|EGJ41577.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK355]
gi|332364668|gb|EGJ42437.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1059]
Length = 79
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ +VN
Sbjct: 65 KRARVMALMPFVN 77
>gi|134295902|ref|YP_001119637.1| 30S ribosomal protein S18 [Burkholderia vietnamiensis G4]
gi|166220935|sp|A4JEU9|RS18_BURVG RecName: Full=30S ribosomal protein S18
gi|134139059|gb|ABO54802.1| SSU ribosomal protein S18P [Burkholderia vietnamiensis G4]
Length = 91
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVDQIDYKDTETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|320528729|ref|ZP_08029881.1| ribosomal protein S18 [Solobacterium moorei F0204]
gi|320130939|gb|EFW23517.1| ribosomal protein S18 [Solobacterium moorei F0204]
Length = 76
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ RRK C + IDYKD+ LL +F+S GKI P R++ K QR LA AI
Sbjct: 3 FRKQRMGRRKVCYFTKNNITYIDYKDVELLKKFVSANGKITPRRVTGTRAKYQRMLAIAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVE 75
>gi|88704449|ref|ZP_01102163.1| 30S ribosomal protein S18 [Congregibacter litoralis KT71]
gi|88701500|gb|EAQ98605.1| 30S ribosomal protein S18 [Congregibacter litoralis KT71]
Length = 75
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ A+KRAR+L L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKAYISETGKIVPSRITGTKAKYQRQLSTAVKRARFLALLPYTD 72
>gi|186685032|ref|YP_001868228.1| 30S ribosomal protein S18 [Nostoc punctiforme PCC 73102]
gi|229560047|sp|B2J0D3|RS18_NOSP7 RecName: Full=30S ribosomal protein S18
gi|186467484|gb|ACC83285.1| ribosomal protein S18 [Nostoc punctiforme PCC 73102]
Length = 71
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ G P IDYKD+ LL +F+++RGKI+P RI+ ++ ++QREL AIKR+R +
Sbjct: 4 FRRRLSPIK-PGEP-IDYKDVDLLRKFVTERGKILPRRITGLTSQQQRELTLAIKRSRIV 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 ALLPFIN 68
>gi|317503266|ref|ZP_07961321.1| 30S ribosomal protein S18 [Prevotella salivae DSM 15606]
gi|315665623|gb|EFV05235.1| 30S ribosomal protein S18 [Prevotella salivae DSM 15606]
Length = 90
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ ++K C G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR
Sbjct: 19 TRKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQ 78
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 79 IALLPYVT 86
>gi|53719096|ref|YP_108082.1| 30S ribosomal protein S18 [Burkholderia pseudomallei K96243]
gi|53723579|ref|YP_103058.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 23344]
gi|67640202|ref|ZP_00439017.1| 30S ribosomal protein S18 [Burkholderia mallei GB8 horse 4]
gi|76812240|ref|YP_333809.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710b]
gi|83719433|ref|YP_442702.1| 30S ribosomal protein S18 [Burkholderia thailandensis E264]
gi|107028949|ref|YP_626044.1| 30S ribosomal protein S18 [Burkholderia cenocepacia AU 1054]
gi|116689893|ref|YP_835516.1| 30S ribosomal protein S18 [Burkholderia cenocepacia HI2424]
gi|121598687|ref|YP_993212.1| 30S ribosomal protein S18 [Burkholderia mallei SAVP1]
gi|124384536|ref|YP_001026013.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10229]
gi|126438832|ref|YP_001059285.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 668]
gi|126448650|ref|YP_001080720.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10247]
gi|126454887|ref|YP_001066553.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106a]
gi|134278013|ref|ZP_01764728.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 305]
gi|161524575|ref|YP_001579587.1| 30S ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|167002902|ref|ZP_02268692.1| 30S ribosomal protein S18 [Burkholderia mallei PRL-20]
gi|167562481|ref|ZP_02355397.1| ribosomal protein S18 [Burkholderia oklahomensis EO147]
gi|167569665|ref|ZP_02362539.1| ribosomal protein S18 [Burkholderia oklahomensis C6786]
gi|167581641|ref|ZP_02374515.1| ribosomal protein S18 [Burkholderia thailandensis TXDOH]
gi|167586988|ref|ZP_02379376.1| ribosomal protein S18 [Burkholderia ubonensis Bu]
gi|167619761|ref|ZP_02388392.1| ribosomal protein S18 [Burkholderia thailandensis Bt4]
gi|167719192|ref|ZP_02402428.1| ribosomal protein S18 [Burkholderia pseudomallei DM98]
gi|167738194|ref|ZP_02410968.1| ribosomal protein S18 [Burkholderia pseudomallei 14]
gi|167815383|ref|ZP_02447063.1| ribosomal protein S18 [Burkholderia pseudomallei 91]
gi|167823791|ref|ZP_02455262.1| ribosomal protein S18 [Burkholderia pseudomallei 9]
gi|167836331|ref|ZP_02463214.1| ribosomal protein S18 [Burkholderia thailandensis MSMB43]
gi|167845334|ref|ZP_02470842.1| ribosomal protein S18 [Burkholderia pseudomallei B7210]
gi|167893876|ref|ZP_02481278.1| ribosomal protein S18 [Burkholderia pseudomallei 7894]
gi|167902330|ref|ZP_02489535.1| ribosomal protein S18 [Burkholderia pseudomallei NCTC 13177]
gi|167910568|ref|ZP_02497659.1| ribosomal protein S18 [Burkholderia pseudomallei 112]
gi|167918594|ref|ZP_02505685.1| ribosomal protein S18 [Burkholderia pseudomallei BCC215]
gi|189350669|ref|YP_001946297.1| 30S ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|217421371|ref|ZP_03452875.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 576]
gi|221198144|ref|ZP_03571190.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2M]
gi|221208365|ref|ZP_03581368.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2]
gi|221215116|ref|ZP_03588083.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD1]
gi|226197276|ref|ZP_03792853.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pakistan 9]
gi|237812611|ref|YP_002897062.1| ribosomal protein S18 [Burkholderia pseudomallei MSHR346]
gi|242316691|ref|ZP_04815707.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106b]
gi|254178433|ref|ZP_04885088.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 10399]
gi|254179492|ref|ZP_04886091.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1655]
gi|254189116|ref|ZP_04895627.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pasteur
52237]
gi|254197494|ref|ZP_04903916.1| 30S ribosomal protein S18 [Burkholderia pseudomallei S13]
gi|254200004|ref|ZP_04906370.1| 30S ribosomal protein S18 [Burkholderia mallei FMH]
gi|254206337|ref|ZP_04912689.1| 30S ribosomal protein S18 [Burkholderia mallei JHU]
gi|254248017|ref|ZP_04941338.1| Ribosomal protein S18 [Burkholderia cenocepacia PC184]
gi|254261784|ref|ZP_04952838.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710a]
gi|254297374|ref|ZP_04964827.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 406e]
gi|254358248|ref|ZP_04974521.1| 30S ribosomal protein S18 [Burkholderia mallei 2002721280]
gi|257138914|ref|ZP_05587176.1| 30S ribosomal protein S18 [Burkholderia thailandensis E264]
gi|59798633|sp|Q62JR1|RS18_BURMA RecName: Full=30S ribosomal protein S18
gi|59798645|sp|Q63UY4|RS18_BURPS RecName: Full=30S ribosomal protein S18
gi|123179948|sp|Q1BH34|RS18_BURCA RecName: Full=30S ribosomal protein S18
gi|123598874|sp|Q3JRJ4|RS18_BURP1 RecName: Full=30S ribosomal protein S18
gi|123753784|sp|Q2SWJ7|RS18_BURTA RecName: Full=30S ribosomal protein S18
gi|166220929|sp|A0K7Z6|RS18_BURCH RecName: Full=30S ribosomal protein S18
gi|166220930|sp|A3MKD4|RS18_BURM7 RecName: Full=30S ribosomal protein S18
gi|166220931|sp|A2S244|RS18_BURM9 RecName: Full=30S ribosomal protein S18
gi|166220932|sp|A1V4Q9|RS18_BURMS RecName: Full=30S ribosomal protein S18
gi|166220933|sp|A3NW32|RS18_BURP0 RecName: Full=30S ribosomal protein S18
gi|166220934|sp|A3NAB4|RS18_BURP6 RecName: Full=30S ribosomal protein S18
gi|229559971|sp|A9AJW3|RS18_BURM1 RecName: Full=30S ribosomal protein S18
gi|52209510|emb|CAH35462.1| 30S ribosomal protein S18 [Burkholderia pseudomallei K96243]
gi|52427002|gb|AAU47595.1| ribosomal protein S18 [Burkholderia mallei ATCC 23344]
gi|76581693|gb|ABA51168.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710b]
gi|83653258|gb|ABC37321.1| ribosomal protein S18 [Burkholderia thailandensis E264]
gi|105898113|gb|ABF81071.1| SSU ribosomal protein S18P [Burkholderia cenocepacia AU 1054]
gi|116647982|gb|ABK08623.1| SSU ribosomal protein S18P [Burkholderia cenocepacia HI2424]
gi|121227497|gb|ABM50015.1| 30S ribosomal protein S18 [Burkholderia mallei SAVP1]
gi|124292556|gb|ABN01825.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10229]
gi|124872793|gb|EAY64509.1| Ribosomal protein S18 [Burkholderia cenocepacia PC184]
gi|126218325|gb|ABN81831.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 668]
gi|126228529|gb|ABN92069.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106a]
gi|126241520|gb|ABO04613.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10247]
gi|134251663|gb|EBA51742.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 305]
gi|147749600|gb|EDK56674.1| 30S ribosomal protein S18 [Burkholderia mallei FMH]
gi|147753780|gb|EDK60845.1| 30S ribosomal protein S18 [Burkholderia mallei JHU]
gi|148027375|gb|EDK85396.1| 30S ribosomal protein S18 [Burkholderia mallei 2002721280]
gi|157807650|gb|EDO84820.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 406e]
gi|157936795|gb|EDO92465.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pasteur
52237]
gi|160342004|gb|ABX15090.1| ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|160699472|gb|EDP89442.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 10399]
gi|169654235|gb|EDS86928.1| 30S ribosomal protein S18 [Burkholderia pseudomallei S13]
gi|184210032|gb|EDU07075.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1655]
gi|189334691|dbj|BAG43761.1| small subunit ribosomal protein S18 [Burkholderia multivorans
ATCC 17616]
gi|217395113|gb|EEC35131.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 576]
gi|221165052|gb|EED97531.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD1]
gi|221171778|gb|EEE04222.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2]
gi|221182076|gb|EEE14477.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2M]
gi|225930655|gb|EEH26665.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pakistan 9]
gi|237506129|gb|ACQ98447.1| ribosomal protein S18 [Burkholderia pseudomallei MSHR346]
gi|238520888|gb|EEP84344.1| 30S ribosomal protein S18 [Burkholderia mallei GB8 horse 4]
gi|242139930|gb|EES26332.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106b]
gi|243061456|gb|EES43642.1| 30S ribosomal protein S18 [Burkholderia mallei PRL-20]
gi|254220473|gb|EET09857.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710a]
gi|325522549|gb|EGD01101.1| 30S ribosomal protein S18 [Burkholderia sp. TJI49]
Length = 91
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEQIDYKDTETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|229496127|ref|ZP_04389848.1| ribosomal protein S18 [Porphyromonas endodontalis ATCC 35406]
gi|229316958|gb|EEN82870.1| ribosomal protein S18 [Porphyromonas endodontalis ATCC 35406]
Length = 90
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S+++K C G IDYKD L +FL+++G+I+P RI+ S K QR +A+A+KRAR+
Sbjct: 19 SNKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGRILPRRITGTSLKFQRRIARAVKRARH 78
Query: 75 LGLIAYVN 82
L L+ +V
Sbjct: 79 LALLPFVT 86
>gi|33240418|ref|NP_875360.1| 30S ribosomal protein S18 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|59798853|sp|Q7VBX4|RS18_PROMA RecName: Full=30S ribosomal protein S18
gi|33237945|gb|AAQ00013.1| Ribosomal protein S18 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 73
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N ++K P+ G P IDYKD+ L +F+++RGKI+P R++ ++ K+QR+L A+KRA
Sbjct: 3 NSLFKKKLSPIK-PGDP-IDYKDVETLKKFITERGKILPRRLTGLTAKQQRDLTTAVKRA 60
Query: 73 RYLGLIAYVN 82
R + L+ +VN
Sbjct: 61 RIIALLPFVN 70
>gi|241895860|ref|ZP_04783156.1| 30S ribosomal protein S18 [Weissella paramesenteroides ATCC
33313]
gi|241870903|gb|EER74654.1| 30S ribosomal protein S18 [Weissella paramesenteroides ATCC
33313]
Length = 80
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD LL RF+S+RGKI+P R++ S K QR++ AIKRAR +GL+ +V
Sbjct: 27 VDYKDTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMGLLPFV 77
>gi|313674400|ref|YP_004052396.1| SSU ribosomal protein s18p [Marivirga tractuosa DSM 4126]
gi|312941098|gb|ADR20288.1| SSU ribosomal protein S18P [Marivirga tractuosa DSM 4126]
Length = 85
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ ++ +++K C G IDYKD L +F++++GK++PSRI+ S K Q+++A+
Sbjct: 7 PINQKKQDNQKKYCRFKRYGIKYIDYKDPNFLLKFVNEQGKLLPSRITGTSAKYQKKVAQ 66
Query: 68 AIKRARYLGLIAYV 81
A+KRAR++ L+ YV
Sbjct: 67 AVKRARHIALLPYV 80
>gi|217967743|ref|YP_002353249.1| ribosomal protein S18 [Dictyoglomus turgidum DSM 6724]
gi|254765428|sp|B8E0J0|RS18_DICTD RecName: Full=30S ribosomal protein S18
gi|217336842|gb|ACK42635.1| ribosomal protein S18 [Dictyoglomus turgidum DSM 6724]
Length = 84
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + IDYK++ L RF++++GKI+P RIS + QR+L+ AIKRARY+
Sbjct: 18 KKKYCIFCSEKIDYIDYKNVERLKRFMTEKGKIIPRRISGNCARHQRQLSTAIKRARYMA 77
Query: 77 LIAYV 81
L+ YV
Sbjct: 78 LLPYV 82
>gi|194396735|ref|YP_002038171.1| 30S ribosomal protein S18 [Streptococcus pneumoniae G54]
gi|229560070|sp|B5E6A4|RS18_STRP4 RecName: Full=30S ribosomal protein S18
gi|194356402|gb|ACF54850.1| ribosomal protein S18 [Streptococcus pneumoniae G54]
Length = 79
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AI
Sbjct: 5 RRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTXAI 64
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ +VN
Sbjct: 65 KRARVMALMPFVN 77
>gi|78066641|ref|YP_369410.1| 30S ribosomal protein S18 [Burkholderia sp. 383]
gi|170703446|ref|ZP_02894217.1| ribosomal protein S18 [Burkholderia ambifaria IOP40-10]
gi|170733231|ref|YP_001765178.1| 30S ribosomal protein S18 [Burkholderia cenocepacia MC0-3]
gi|171321592|ref|ZP_02910523.1| ribosomal protein S18 [Burkholderia ambifaria MEX-5]
gi|206560307|ref|YP_002231071.1| 30S ribosomal protein S18 [Burkholderia cenocepacia J2315]
gi|238027018|ref|YP_002911249.1| 30S ribosomal protein S18 [Burkholderia glumae BGR1]
gi|254252204|ref|ZP_04945522.1| Ribosomal protein S18 [Burkholderia dolosa AUO158]
gi|330817223|ref|YP_004360928.1| 30S ribosomal protein S18 [Burkholderia gladioli BSR3]
gi|123742574|sp|Q39FK0|RS18_BURS3 RecName: Full=30S ribosomal protein S18
gi|229559969|sp|B1JTF1|RS18_BURCC RecName: Full=30S ribosomal protein S18
gi|229559970|sp|B4EBH1|RS18_BURCJ RecName: Full=30S ribosomal protein S18
gi|77967386|gb|ABB08766.1| SSU ribosomal protein S18P [Burkholderia sp. 383]
gi|124894813|gb|EAY68693.1| Ribosomal protein S18 [Burkholderia dolosa AUO158]
gi|169816473|gb|ACA91056.1| ribosomal protein S18 [Burkholderia cenocepacia MC0-3]
gi|170131644|gb|EDT00201.1| ribosomal protein S18 [Burkholderia ambifaria IOP40-10]
gi|171093125|gb|EDT38342.1| ribosomal protein S18 [Burkholderia ambifaria MEX-5]
gi|198036348|emb|CAR52244.1| 30S ribosomal protein S18 [Burkholderia cenocepacia J2315]
gi|237876212|gb|ACR28545.1| 30S ribosomal protein S18 [Burkholderia glumae BGR1]
gi|327369616|gb|AEA60972.1| 30S ribosomal protein S18 [Burkholderia gladioli BSR3]
Length = 91
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVEQIDYKDTETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|37522628|ref|NP_926005.1| 30S ribosomal protein S18 [Gloeobacter violaceus PCC 7421]
gi|59798825|sp|Q7NCC0|RS18_GLOVI RecName: Full=30S ribosomal protein S18
gi|35213629|dbj|BAC91000.1| 30S ribosomal protein S18 [Gloeobacter violaceus PCC 7421]
Length = 74
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 43/53 (81%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+IDYK++ LL +F+++RGKI+P RI+ ++ K+QR+L AIKRAR L L+ +VN
Sbjct: 19 KIDYKEVDLLRKFITERGKILPRRITGLTAKQQRDLTVAIKRARLLALLPFVN 71
>gi|33863012|ref|NP_894572.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9313]
gi|124023182|ref|YP_001017489.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9303]
gi|59798838|sp|Q7TUZ8|RS18_PROMM RecName: Full=30S ribosomal protein S18
gi|166220972|sp|A2C9R4|RS18_PROM3 RecName: Full=30S ribosomal protein S18
gi|33634929|emb|CAE20915.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9313]
gi|123963468|gb|ABM78224.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9303]
Length = 73
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F++ RGKI+P R++ ++ K+QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVDLLKKFITDRGKILPRRLTGLTSKQQRDLTNAVKRARIIALLPFVN 70
>gi|81427625|ref|YP_394622.1| 30S ribosomal protein S18 [Lactobacillus sakei subsp. sakei 23K]
gi|123742279|sp|Q38ZR6|RS18_LACSS RecName: Full=30S ribosomal protein S18
gi|78609264|emb|CAI54311.1| 30S Ribosomal protein S18 [Lactobacillus sakei subsp. sakei 23K]
Length = 79
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+ +V
Sbjct: 26 IDYKDTDLLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLLPFVT 77
>gi|15829080|ref|NP_326440.1| 30S ribosomal protein S18 [Mycoplasma pulmonis UAB CTIP]
gi|20978725|sp|Q98PW0|RS18_MYCPU RecName: Full=30S ribosomal protein S18
gi|14090024|emb|CAC13782.1| 30S RIBOSOMAL PROTEIN S18 [Mycoplasma pulmonis]
Length = 105
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
L +G IDYKD+ LL++F++ GKI+PS+I+ VS K+QR L +AIKRAR + L+ +
Sbjct: 20 LDEQGINYIDYKDVELLSKFINSHGKILPSKITDVSAKRQRMLTRAIKRARNMALLPFT 78
>gi|115351860|ref|YP_773699.1| 30S ribosomal protein S18 [Burkholderia ambifaria AMMD]
gi|172060830|ref|YP_001808482.1| 30S ribosomal protein S18 [Burkholderia ambifaria MC40-6]
gi|122323038|sp|Q0BEQ8|RS18_BURCM RecName: Full=30S ribosomal protein S18
gi|229559968|sp|B1YRJ2|RS18_BURA4 RecName: Full=30S ribosomal protein S18
gi|115281848|gb|ABI87365.1| SSU ribosomal protein S18P [Burkholderia ambifaria AMMD]
gi|171993347|gb|ACB64266.1| ribosomal protein S18 [Burkholderia ambifaria MC40-6]
Length = 91
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAAGVDQIDYKDTETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|237809238|ref|YP_002893678.1| 30S ribosomal protein S18 [Tolumonas auensis DSM 9187]
gi|259494821|sp|C4LAB7|RS18_TOLAT RecName: Full=30S ribosomal protein S18
gi|237501499|gb|ACQ94092.1| ribosomal protein S18 [Tolumonas auensis DSM 9187]
Length = 76
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
IDYKD L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +L
Sbjct: 21 IDYKDTVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLALLPYTDL 73
>gi|149377616|ref|ZP_01895354.1| ribosomal protein S18 [Marinobacter algicola DG893]
gi|149358089|gb|EDM46573.1| ribosomal protein S18 [Marinobacter algicola DG893]
gi|311693517|gb|ADP96390.1| ribosomal protein S18 [marine bacterium HP15]
Length = 76
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYSD 72
>gi|116491827|ref|YP_803562.1| SSU ribosomal protein S18P [Pediococcus pentosaceus ATCC 25745]
gi|122266709|sp|Q03I52|RS18_PEDPA RecName: Full=30S ribosomal protein S18
gi|116101977|gb|ABJ67120.1| SSU ribosomal protein S18P [Pediococcus pentosaceus ATCC 25745]
Length = 78
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTELLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLLPFV 75
>gi|323341109|ref|ZP_08081357.1| 30S ribosomal protein S18 [Lactobacillus ruminis ATCC 25644]
gi|323091530|gb|EFZ34154.1| 30S ribosomal protein S18 [Lactobacillus ruminis ATCC 25644]
Length = 78
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTDLLKRFISERGKILPRRVTGTSAKNQRKLTVAIKRARIMGLLPFV 75
>gi|326796491|ref|YP_004314311.1| 30S ribosomal protein S18 [Marinomonas mediterranea MMB-1]
gi|326547255|gb|ADZ92475.1| 30S ribosomal protein S18 [Marinomonas mediterranea MMB-1]
Length = 76
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYIALLPYTD 72
>gi|87119507|ref|ZP_01075404.1| 30S ribosomal protein S18 [Marinomonas sp. MED121]
gi|86164983|gb|EAQ66251.1| 30S ribosomal protein S18 [Marinomonas sp. MED121]
Length = 76
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ L+ Y +
Sbjct: 14 TAEGTVEIDYKDLDTLKGYVTETGKIVPSRITGTKARYQRQLATAIKRARYIALLPYTD 72
>gi|307152099|ref|YP_003887483.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7822]
gi|306982327|gb|ADN14208.1| ribosomal protein S18 [Cyanothece sp. PCC 7822]
Length = 71
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 42/52 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI LL +F+++RGKI+P RI+ ++ ++QR+L A+KRAR + L+ ++N
Sbjct: 17 IDYKDIELLRKFITERGKILPRRITGLTAQQQRDLTAAVKRARLIALLPFIN 68
>gi|154503456|ref|ZP_02040516.1| hypothetical protein RUMGNA_01280 [Ruminococcus gnavus ATCC
29149]
gi|153795556|gb|EDN77976.1| hypothetical protein RUMGNA_01280 [Ruminococcus gnavus ATCC
29149]
Length = 90
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++
Sbjct: 24 RKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRARHIA 83
Query: 77 LIAYVN 82
L+ YV
Sbjct: 84 LMPYVQ 89
>gi|110638978|ref|YP_679187.1| 30S ribosomal protein S18 [Cytophaga hutchinsonii ATCC 33406]
gi|122966648|sp|Q11RW9|RS18_CYTH3 RecName: Full=30S ribosomal protein S18
gi|110281659|gb|ABG59845.1| SSU ribosomal protein S18P [Cytophaga hutchinsonii ATCC 33406]
Length = 83
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
V +R+K C G IDYKD L +F++++GKI+P R++ S K QR++++A+KRAR
Sbjct: 11 VENRKKYCRFKKMGIFYIDYKDPNFLLKFVNEQGKILPRRLTGTSLKYQRKVSQAVKRAR 70
Query: 74 YLGLIAYV 81
+GL+ YV
Sbjct: 71 LIGLLPYV 78
>gi|270289884|ref|ZP_06196110.1| 30S ribosomal protein S18 [Pediococcus acidilactici 7_4]
gi|304385863|ref|ZP_07368207.1| 30S ribosomal protein S18 [Pediococcus acidilactici DSM 20284]
gi|270281421|gb|EFA27253.1| 30S ribosomal protein S18 [Pediococcus acidilactici 7_4]
gi|304328367|gb|EFL95589.1| 30S ribosomal protein S18 [Pediococcus acidilactici DSM 20284]
Length = 78
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTELLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLLPFV 75
>gi|119509768|ref|ZP_01628913.1| 30S ribosomal protein S18 [Nodularia spumigena CCY9414]
gi|119465634|gb|EAW46526.1| 30S ribosomal protein S18 [Nodularia spumigena CCY9414]
Length = 71
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ P+ G P IDYKD+ LL +++++RGKI+P RI+ ++ K+QR+L AIKRAR +
Sbjct: 4 YRRRLSPIK-PGDP-IDYKDVDLLRKYITERGKILPRRITGLTCKQQRDLTLAIKRARIV 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|209559923|ref|YP_002286395.1| 30S ribosomal protein S18 [Streptococcus pyogenes NZ131]
gi|238058158|sp|B5XI38|RS18_STRPZ RecName: Full=30S ribosomal protein S18
gi|209541124|gb|ACI61700.1| SSU ribosomal protein S18p [Streptococcus pyogenes NZ131]
Length = 79
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD LL+RF+S+RGKI+P R+ S K QR++ AIKRAR + L+ YVN
Sbjct: 26 VDYKDTELLSRFVSERGKILPRRVPGTSAKNQRKVTTAIKRARVMALMPYVN 77
>gi|331091911|ref|ZP_08340743.1| hypothetical protein HMPREF9477_01386 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402810|gb|EGG82377.1| hypothetical protein HMPREF9477_01386 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 87
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYV 81
L AIKRAR+L L+ YV
Sbjct: 69 LTVAIKRARHLALMPYV 85
>gi|268316170|ref|YP_003289889.1| 30S ribosomal protein S18 [Rhodothermus marinus DSM 4252]
gi|262333704|gb|ACY47501.1| ribosomal protein S18 [Rhodothermus marinus DSM 4252]
Length = 65
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 42/51 (82%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ L +F++++GKI+P RI+ VS K QR++A+AIKRAR+L L+ +V
Sbjct: 10 VDYKDVEFLKQFINEQGKILPRRITGVSAKTQRQIARAIKRARHLALLPFV 60
>gi|85859721|ref|YP_461923.1| 30S ribosomal protein S18P [Syntrophus aciditrophicus SB]
gi|123725273|sp|Q2LUJ7|RS18_SYNAS RecName: Full=30S ribosomal protein S18
gi|85722812|gb|ABC77755.1| SSU ribosomal protein S18P [Syntrophus aciditrophicus SB]
Length = 88
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ HRRK C +IDYK +L+ ++++RGKI+P RI+ K QREL +AIK
Sbjct: 13 RKKFFHRRKYCKFCSDSTIKIDYKRPDILHDYITERGKIMPRRITGSCSKHQRELTQAIK 72
Query: 71 RARYLGLIAYV 81
RAR + L+ +V
Sbjct: 73 RARSIALLPFV 83
>gi|319941486|ref|ZP_08015814.1| 30S ribosomal protein S18 [Sutterella wadsworthensis 3_1_45B]
gi|319805106|gb|EFW01936.1| 30S ribosomal protein S18 [Sutterella wadsworthensis 3_1_45B]
Length = 90
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + +IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 23 RRKFCRFTAEHVEQIDYKDVDTLRDFIQENGKIMPARLTGTQAHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 83 LLPYTD 88
>gi|312796133|ref|YP_004029055.1| SSU ribosomal protein S18P [Burkholderia rhizoxinica HKI 454]
gi|312167908|emb|CBW74911.1| SSU ribosomal protein S18P [Burkholderia rhizoxinica HKI 454]
Length = 91
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKDI L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAASVEYIDYKDIETLKDFIGENGKITPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 82 LLPYTDL 88
>gi|119474660|ref|ZP_01615013.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2143]
gi|119450863|gb|EAW32096.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2143]
Length = 75
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ IKRAR+L L+ Y +
Sbjct: 14 TAEGVDQIDYKDLDTLKAYVSETGKIVPSRITGTKAKYQRQLSTCIKRARFLALLPYTD 72
>gi|330718016|ref|ZP_08312616.1| 30S ribosomal protein S18 [Leuconostoc fallax KCTC 3537]
Length = 93
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK++ LL RF+S+RGKI+P R++ S K QR++ A+KRAR +GL+ +V
Sbjct: 40 IDYKNVELLERFISERGKILPRRVTGTSAKNQRKVTTAVKRARIMGLLPFVT 91
>gi|317502276|ref|ZP_07960447.1| ribosomal protein S18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896321|gb|EFV18421.1| ribosomal protein S18 [Lachnospiraceae bacterium 8_1_57FAA]
Length = 88
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++
Sbjct: 22 RKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRARHIA 81
Query: 77 LIAYVN 82
L+ YV
Sbjct: 82 LMPYVQ 87
>gi|116513237|ref|YP_812143.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275992|sp|Q04CW7|RS18_LACDB RecName: Full=30S ribosomal protein S18
gi|116092552|gb|ABJ57705.1| SSU ribosomal protein S18P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325124864|gb|ADY84194.1| 30S Ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 78
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL F+S+RGKI+P R++ S K QR++A AIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKHFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|69246714|ref|ZP_00604082.1| Ribosomal protein S18 [Enterococcus faecium DO]
gi|227550648|ref|ZP_03980697.1| ribosomal protein S18 [Enterococcus faecium TX1330]
gi|257878654|ref|ZP_05658307.1| ribosomal protein S18 [Enterococcus faecium 1,230,933]
gi|257881320|ref|ZP_05660973.1| ribosomal protein S18 [Enterococcus faecium 1,231,502]
gi|257885595|ref|ZP_05665248.1| ribosomal protein S18 [Enterococcus faecium 1,231,501]
gi|257888087|ref|ZP_05667740.1| ribosomal protein S18 [Enterococcus faecium 1,141,733]
gi|257890537|ref|ZP_05670190.1| ribosomal protein S18 [Enterococcus faecium 1,231,410]
gi|257893112|ref|ZP_05672765.1| ribosomal protein S18 [Enterococcus faecium 1,231,408]
gi|257896295|ref|ZP_05675948.1| ribosomal protein S18 [Enterococcus faecium Com12]
gi|257899279|ref|ZP_05678932.1| ribosomal protein S18 [Enterococcus faecium Com15]
gi|258615262|ref|ZP_05713032.1| 30S ribosomal protein S18 [Enterococcus faecium DO]
gi|260558235|ref|ZP_05830431.1| ribosomal protein S18 [Enterococcus faecium C68]
gi|261206925|ref|ZP_05921614.1| ribosomal protein S18 [Enterococcus faecium TC 6]
gi|289566498|ref|ZP_06446922.1| 30S ribosomal protein S18 [Enterococcus faecium D344SRF]
gi|293379376|ref|ZP_06625520.1| ribosomal protein S18 [Enterococcus faecium PC4.1]
gi|293557087|ref|ZP_06675645.1| ribosomal protein S18 [Enterococcus faecium E1039]
gi|293563259|ref|ZP_06677711.1| ribosomal protein S18 [Enterococcus faecium E1162]
gi|293569151|ref|ZP_06680457.1| ribosomal protein S18 [Enterococcus faecium E1071]
gi|293572726|ref|ZP_06683690.1| ribosomal protein S18 [Enterococcus faecium E980]
gi|294616651|ref|ZP_06696422.1| ribosomal protein S18 [Enterococcus faecium E1636]
gi|294619753|ref|ZP_06699158.1| ribosomal protein S18 [Enterococcus faecium E1679]
gi|294623767|ref|ZP_06702595.1| ribosomal protein S18 [Enterococcus faecium U0317]
gi|314940123|ref|ZP_07847303.1| ribosomal protein S18 [Enterococcus faecium TX0133a04]
gi|314943046|ref|ZP_07849850.1| ribosomal protein S18 [Enterococcus faecium TX0133C]
gi|314948164|ref|ZP_07851560.1| ribosomal protein S18 [Enterococcus faecium TX0082]
gi|314953422|ref|ZP_07856340.1| ribosomal protein S18 [Enterococcus faecium TX0133A]
gi|314993839|ref|ZP_07859175.1| ribosomal protein S18 [Enterococcus faecium TX0133B]
gi|314998136|ref|ZP_07863018.1| ribosomal protein S18 [Enterococcus faecium TX0133a01]
gi|68195128|gb|EAN09587.1| Ribosomal protein S18 [Enterococcus faecium DO]
gi|227180214|gb|EEI61186.1| ribosomal protein S18 [Enterococcus faecium TX1330]
gi|257812882|gb|EEV41640.1| ribosomal protein S18 [Enterococcus faecium 1,230,933]
gi|257816978|gb|EEV44306.1| ribosomal protein S18 [Enterococcus faecium 1,231,502]
gi|257821451|gb|EEV48581.1| ribosomal protein S18 [Enterococcus faecium 1,231,501]
gi|257824141|gb|EEV51073.1| ribosomal protein S18 [Enterococcus faecium 1,141,733]
gi|257826897|gb|EEV53523.1| ribosomal protein S18 [Enterococcus faecium 1,231,410]
gi|257829491|gb|EEV56098.1| ribosomal protein S18 [Enterococcus faecium 1,231,408]
gi|257832860|gb|EEV59281.1| ribosomal protein S18 [Enterococcus faecium Com12]
gi|257837191|gb|EEV62265.1| ribosomal protein S18 [Enterococcus faecium Com15]
gi|260075409|gb|EEW63715.1| ribosomal protein S18 [Enterococcus faecium C68]
gi|260078553|gb|EEW66255.1| ribosomal protein S18 [Enterococcus faecium TC 6]
gi|289161707|gb|EFD09583.1| 30S ribosomal protein S18 [Enterococcus faecium D344SRF]
gi|291588120|gb|EFF19962.1| ribosomal protein S18 [Enterococcus faecium E1071]
gi|291590471|gb|EFF22209.1| ribosomal protein S18 [Enterococcus faecium E1636]
gi|291594023|gb|EFF25492.1| ribosomal protein S18 [Enterococcus faecium E1679]
gi|291596721|gb|EFF27944.1| ribosomal protein S18 [Enterococcus faecium U0317]
gi|291600750|gb|EFF31044.1| ribosomal protein S18 [Enterococcus faecium E1039]
gi|291604798|gb|EFF34280.1| ribosomal protein S18 [Enterococcus faecium E1162]
gi|291607218|gb|EFF36576.1| ribosomal protein S18 [Enterococcus faecium E980]
gi|292641899|gb|EFF60065.1| ribosomal protein S18 [Enterococcus faecium PC4.1]
gi|313587848|gb|EFR66693.1| ribosomal protein S18 [Enterococcus faecium TX0133a01]
gi|313591730|gb|EFR70575.1| ribosomal protein S18 [Enterococcus faecium TX0133B]
gi|313594525|gb|EFR73370.1| ribosomal protein S18 [Enterococcus faecium TX0133A]
gi|313598246|gb|EFR77091.1| ribosomal protein S18 [Enterococcus faecium TX0133C]
gi|313640628|gb|EFS05208.1| ribosomal protein S18 [Enterococcus faecium TX0133a04]
gi|313645418|gb|EFS09998.1| ribosomal protein S18 [Enterococcus faecium TX0082]
Length = 78
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI LL RF+S+RGKI+P R++ K QR++ AIKRAR +GL+ +V+
Sbjct: 25 IDYKDIELLKRFISERGKILPRRVTGTGAKNQRKITVAIKRARIMGLLPFVS 76
>gi|259047889|ref|ZP_05738290.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
gi|259035566|gb|EEW36821.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
Length = 80
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C IDYKD+ LL R++S++GKI+P R++ K QR L AIKRAR +GL
Sbjct: 14 KKVCYFCANHVDYIDYKDVELLKRYISEKGKILPRRVTGTCAKHQRTLTVAIKRARIMGL 73
Query: 78 IAYVNL 83
+ + +
Sbjct: 74 LPFTTV 79
>gi|224534030|ref|ZP_03674614.1| ribosomal protein S18 [Borrelia burgdorferi CA-11.2a]
gi|225549263|ref|ZP_03770236.1| ribosomal protein S18 [Borrelia burgdorferi 94a]
gi|224512866|gb|EEF83233.1| ribosomal protein S18 [Borrelia burgdorferi CA-11.2a]
gi|225370121|gb|EEG99561.1| ribosomal protein S18 [Borrelia burgdorferi 94a]
gi|312148403|gb|ADQ31062.1| ribosomal protein S18 [Borrelia burgdorferi JD1]
Length = 96
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKDFEFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|332283720|ref|YP_004415631.1| 30S ribosomal protein S18 [Pusillimonas sp. T7-7]
gi|330427673|gb|AEC19007.1| 30S ribosomal protein S18 [Pusillimonas sp. T7-7]
Length = 90
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD+ L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 22 RRKFCRFTAANVDEIDYKDLDTLRDFIQENGKIIPARLTGTKAHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|281424416|ref|ZP_06255329.1| ribosomal protein S18 [Prevotella oris F0302]
gi|299140845|ref|ZP_07033983.1| ribosomal protein S18 [Prevotella oris C735]
gi|281401685|gb|EFB32516.1| ribosomal protein S18 [Prevotella oris F0302]
gi|298577811|gb|EFI49679.1| ribosomal protein S18 [Prevotella oris C735]
Length = 90
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ ++K C G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR
Sbjct: 19 TRKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQ 78
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 79 IALLPYVT 86
>gi|116074877|ref|ZP_01472138.1| 30S ribosomal protein S18 [Synechococcus sp. RS9916]
gi|116068099|gb|EAU73852.1| 30S ribosomal protein S18 [Synechococcus sp. RS9916]
Length = 73
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR + ++ +VN
Sbjct: 16 GDP-IDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARIVAMLPFVN 70
>gi|11467563|ref|NP_043709.1| ribosomal protein S18 [Odontella sinensis]
gi|1350880|sp|P49505|RR18_ODOSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1185258|emb|CAA91741.1| 30S ribosomal protein S18 [Odontella sinensis]
Length = 72
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K P+S +IDYKDI LL F++++GKI+P R + V+ ++QR++AKAIKRAR
Sbjct: 2 LAQKQKLSPISVNQ--KIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQIAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L+ +V
Sbjct: 60 VLSLLPFV 67
>gi|224510719|pdb|3FIH|R Chain R, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|251837152|pdb|3IY8|R Chain R, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
gi|294662234|pdb|2WWL|R Chain R, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387982|pdb|3OFO|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308388003|pdb|3OFP|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320040|pdb|3OFA|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320061|pdb|3OFB|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320144|pdb|3OFX|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320165|pdb|3OFY|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113629|pdb|3OAQ|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|315113650|pdb|3OAR|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The Second 70s Ribosome
Length = 55
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +
Sbjct: 2 IDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTD 53
>gi|328956357|ref|YP_004373690.1| SSU ribosomal protein S18P [Coriobacterium glomerans PW2]
gi|328456681|gb|AEB07875.1| SSU ribosomal protein S18P [Coriobacterium glomerans PW2]
Length = 88
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKDI+LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 11 RRKYCQFCKENTEHIDYKDIQLLRKYMTDRGKIKPRRVTGTCTQHQHDIANAIKRAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYT 75
>gi|255530652|ref|YP_003091024.1| 30S ribosomal protein S18 [Pedobacter heparinus DSM 2366]
gi|255343636|gb|ACU02962.1| ribosomal protein S18 [Pedobacter heparinus DSM 2366]
Length = 87
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR+
Sbjct: 16 DNRKKYCRFRKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKFQRKVAQAVKRARH 75
Query: 75 LGLIAYV 81
+GL+ +V
Sbjct: 76 IGLLPFV 82
>gi|169830183|ref|YP_001700341.1| 30S ribosomal protein S18 [Lysinibacillus sphaericus C3-41]
gi|168994671|gb|ACA42211.1| 30S ribosomal protein S18 [Lysinibacillus sphaericus C3-41]
Length = 78
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK +R +GL+ +
Sbjct: 14 CYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTSAIKVSRIMGLLPF 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|291548589|emb|CBL24851.1| SSU ribosomal protein S18P [Ruminococcus torques L2-14]
Length = 88
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++
Sbjct: 22 RKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRARHIS 81
Query: 77 LIAYVN 82
L+ YV
Sbjct: 82 LMPYVQ 87
>gi|291542457|emb|CBL15567.1| SSU ribosomal protein S18P [Ruminococcus bromii L2-63]
Length = 79
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKDI L R++S+RGKI+P R++ + QREL AIKRAR+L
Sbjct: 13 RKKVCGFCVDKVENIDYKDIARLRRYMSERGKILPRRVTGTCARHQRELTVAIKRARHLA 72
Query: 77 LIAYV 81
L+ Y
Sbjct: 73 LLPYT 77
>gi|303257677|ref|ZP_07343689.1| ribosomal protein S18 [Burkholderiales bacterium 1_1_47]
gi|331000769|ref|ZP_08324418.1| ribosomal protein S18 [Parasutterella excrementihominis YIT
11859]
gi|302859647|gb|EFL82726.1| ribosomal protein S18 [Burkholderiales bacterium 1_1_47]
gi|329570501|gb|EGG52226.1| ribosomal protein S18 [Parasutterella excrementihominis YIT
11859]
Length = 90
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +IDYKDI L F+ + GKI+P+R++ QR+L AIKRAR+L
Sbjct: 23 RKKFCRFTVDHVDQIDYKDIDTLRDFIQENGKIMPARLTGTKAHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVN 82
L+AY +
Sbjct: 83 LLAYTD 88
>gi|90960999|ref|YP_534915.1| 30S ribosomal protein S18 [Lactobacillus salivarius UCC118]
gi|227891677|ref|ZP_04009482.1| 30S ribosomal protein S18 [Lactobacillus salivarius ATCC 11741]
gi|301300480|ref|ZP_07206679.1| ribosomal protein S18 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|123270037|sp|Q1WVN7|RS18_LACS1 RecName: Full=30S ribosomal protein S18
gi|90820193|gb|ABD98832.1| SSU ribosomal protein S18P [Lactobacillus salivarius UCC118]
gi|227866480|gb|EEJ73901.1| 30S ribosomal protein S18 [Lactobacillus salivarius ATCC 11741]
gi|300851927|gb|EFK79612.1| ribosomal protein S18 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 78
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTVAIKRARIMGLLPFV 75
>gi|328954270|ref|YP_004371604.1| 30S ribosomal protein S18 [Desulfobacca acetoxidans DSM 11109]
gi|328454594|gb|AEB10423.1| 30S ribosomal protein S18 [Desulfobacca acetoxidans DSM 11109]
Length = 85
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + HRRK C ID+KD+ L F+++RGKI+P RIS + QR++ AIK
Sbjct: 9 RRPIFHRRKVCRFCVDSKLVIDHKDVNTLRHFITERGKIIPRRISGNCARHQRKVTLAIK 68
Query: 71 RARYLGLIAY 80
RAR+L L+ Y
Sbjct: 69 RARHLALMPY 78
>gi|118411014|ref|YP_874409.1| 30S ribosomal protein S18 [Phaeodactylum tricornutum]
gi|125987696|sp|A0T0D4|RR18_PHATC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116739761|gb|ABK20632.1| 30S ribosomal protein S18 [Phaeodactylum tricornutum]
Length = 72
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
VS ++K P+S IDYKDI LL F++++GKI+P R + V+ ++QR LAKAIKRAR
Sbjct: 2 VSKKQKLSPISLNQ--NIDYKDIDLLTLFVTEQGKILPRRATGVTVQQQRRLAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L +V
Sbjct: 60 VLSLFPFV 67
>gi|95930451|ref|ZP_01313187.1| ribosomal protein S18 [Desulfuromonas acetoxidans DSM 684]
gi|95133491|gb|EAT15154.1| ribosomal protein S18 [Desulfuromonas acetoxidans DSM 684]
Length = 85
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +IDYK++R L F+S+RGKIVP RIS QR++ +AIKRAR +
Sbjct: 15 RRKGCRFCADSSLKIDYKEVRTLRYFISERGKIVPRRISGNCATHQRKVTEAIKRARNIA 74
Query: 77 LIAYVN 82
L+++ +
Sbjct: 75 LLSFTS 80
>gi|126651975|ref|ZP_01724167.1| ribosomal protein S18 [Bacillus sp. B14905]
gi|299541785|ref|ZP_07052108.1| 30S ribosomal protein S18 [Lysinibacillus fusiformis ZC1]
gi|126591244|gb|EAZ85353.1| ribosomal protein S18 [Bacillus sp. B14905]
gi|298725523|gb|EFI66164.1| 30S ribosomal protein S18 [Lysinibacillus fusiformis ZC1]
Length = 78
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK +R +GL+ +
Sbjct: 14 CYFTSNNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTSAIKVSRIMGLLPF 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|311742122|ref|ZP_07715932.1| 30S ribosomal protein S18 [Aeromicrobium marinum DSM 15272]
gi|311314615|gb|EFQ84522.1| 30S ribosomal protein S18 [Aeromicrobium marinum DSM 15272]
Length = 78
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P++R+ ++KS PL+ G IDYKD LL +F+S RGKI R++ VS ++QR +AK
Sbjct: 4 PVIRK---PKKKSNPLAVAGVTTIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIAK 60
Query: 68 AIKRARYLGLIAYVN 82
AIK AR + L+ Y +
Sbjct: 61 AIKNAREMALLPYTS 75
>gi|149926828|ref|ZP_01915087.1| 30S ribosomal protein S18 [Limnobacter sp. MED105]
gi|149824380|gb|EDM83598.1| 30S ribosomal protein S18 [Limnobacter sp. MED105]
Length = 89
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +IDYKDI L F+S+ GKI+P+RI+ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTVGKVEQIDYKDIDTLKDFISENGKIMPARITGTKANYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LLPYTD 87
>gi|148543252|ref|YP_001270622.1| 30S ribosomal protein S18 [Lactobacillus reuteri DSM 20016]
gi|184152664|ref|YP_001841005.1| 30S ribosomal protein S18 [Lactobacillus reuteri JCM 1112]
gi|194467411|ref|ZP_03073398.1| ribosomal protein S18 [Lactobacillus reuteri 100-23]
gi|227364315|ref|ZP_03848408.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM2-3]
gi|227543727|ref|ZP_03973776.1| 30S ribosomal protein S18 [Lactobacillus reuteri CF48-3A]
gi|259502122|ref|ZP_05745024.1| 30S ribosomal protein S18 [Lactobacillus antri DSM 16041]
gi|300908792|ref|ZP_07126255.1| 30S ribosomal protein S18 [Lactobacillus reuteri SD2112]
gi|312869248|ref|ZP_07729420.1| ribosomal protein S18 [Lactobacillus oris PB013-T2-3]
gi|325683514|ref|ZP_08163030.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM4-1A]
gi|167011191|sp|A5VHG1|RS18_LACRD RecName: Full=30S ribosomal protein S18
gi|229560043|sp|B2G4Z3|RS18_LACRJ RecName: Full=30S ribosomal protein S18
gi|148530286|gb|ABQ82285.1| SSU ribosomal protein S18P [Lactobacillus reuteri DSM 20016]
gi|183224008|dbj|BAG24525.1| 30S ribosomal protein S18 [Lactobacillus reuteri JCM 1112]
gi|194454447|gb|EDX43344.1| ribosomal protein S18 [Lactobacillus reuteri 100-23]
gi|227070628|gb|EEI08958.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM2-3]
gi|227186295|gb|EEI66366.1| 30S ribosomal protein S18 [Lactobacillus reuteri CF48-3A]
gi|259169935|gb|EEW54430.1| 30S ribosomal protein S18 [Lactobacillus antri DSM 16041]
gi|300894199|gb|EFK87557.1| 30S ribosomal protein S18 [Lactobacillus reuteri SD2112]
gi|311095269|gb|EFQ53541.1| ribosomal protein S18 [Lactobacillus oris PB013-T2-3]
gi|324977864|gb|EGC14815.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM4-1A]
Length = 78
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLPFV 75
>gi|310818662|ref|YP_003951020.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|309391734|gb|ADO69193.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
Length = 69
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK PL +D+KD++LL F+++RG+++P R++ V+ ++QR++AKA+KRAR LG
Sbjct: 3 RRKPNPLGN--VRTLDFKDVQLLKYFVTERGRLIPRRLTGVTAQQQRQIAKAVKRARLLG 60
Query: 77 LIAYVN 82
L+ ++
Sbjct: 61 LLPFLQ 66
>gi|189501828|ref|YP_001957545.1| 30S ribosomal protein S18 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497269|gb|ACE05816.1| hypothetical protein Aasi_0398 [Candidatus Amoebophilus asiaticus
5a2]
Length = 83
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C G +DYK++ L RFL+++GKI+P RIS S K Q+++A+AIKRAR+L
Sbjct: 14 KKKYCRFKKLGIKYVDYKNLDFLFRFLNEQGKILPRRISGNSLKYQKKVAQAIKRARHLA 73
Query: 77 LIAYV 81
L+ YV
Sbjct: 74 LLPYV 78
>gi|227529854|ref|ZP_03959903.1| 30S ribosomal protein S18 [Lactobacillus vaginalis ATCC 49540]
gi|227350223|gb|EEJ40514.1| 30S ribosomal protein S18 [Lactobacillus vaginalis ATCC 49540]
Length = 78
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLPFV 75
>gi|224534892|ref|ZP_03675461.1| ribosomal protein S18 [Borrelia spielmanii A14S]
gi|224513832|gb|EEF84157.1| ribosomal protein S18 [Borrelia spielmanii A14S]
Length = 96
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|257871397|ref|ZP_05651050.1| ribosomal protein S18 [Enterococcus gallinarum EG2]
gi|257805561|gb|EEV34383.1| ribosomal protein S18 [Enterococcus gallinarum EG2]
Length = 78
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTVAIKRARIMGLLPFVG 76
>gi|260072537|gb|ACX30437.1| ribosomal protein S18 [uncultured SUP05 cluster bacterium]
gi|269468495|gb|EEZ80153.1| ribosomal protein S18 [uncultured SUP05 cluster bacterium]
Length = 84
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ +L + + + GKI PSR++ + K QR+L AIKRAR+L LI Y
Sbjct: 19 CRFTAAGVKEIDYKDVDVLLKNIDESGKITPSRMTGTTAKFQRQLTTAIKRARFLALIPY 78
Query: 81 VN 82
+
Sbjct: 79 TD 80
>gi|15594459|ref|NP_212247.1| 30S ribosomal protein S18 [Borrelia burgdorferi B31]
gi|216264194|ref|ZP_03436186.1| ribosomal protein S18 [Borrelia burgdorferi 156a]
gi|218249765|ref|YP_002374641.1| ribosomal protein S18 [Borrelia burgdorferi ZS7]
gi|221217474|ref|ZP_03588945.1| ribosomal protein S18 [Borrelia burgdorferi 72a]
gi|224532934|ref|ZP_03673544.1| ribosomal protein S18 [Borrelia burgdorferi WI91-23]
gi|225549865|ref|ZP_03770827.1| ribosomal protein S18 [Borrelia burgdorferi 118a]
gi|225552003|ref|ZP_03772943.1| ribosomal protein S18 [Borrelia sp. SV1]
gi|226320695|ref|ZP_03796253.1| ribosomal protein S18 [Borrelia burgdorferi 29805]
gi|226321976|ref|ZP_03797501.1| ribosomal protein S18 [Borrelia burgdorferi Bol26]
gi|6226082|sp|O51140|RS18_BORBU RecName: Full=30S ribosomal protein S18
gi|226735111|sp|B7J146|RS18_BORBZ RecName: Full=30S ribosomal protein S18
gi|2687990|gb|AAC66493.1| ribosomal protein S18 (rpsR) [Borrelia burgdorferi B31]
gi|215980667|gb|EEC21474.1| ribosomal protein S18 [Borrelia burgdorferi 156a]
gi|218164953|gb|ACK75014.1| ribosomal protein S18 [Borrelia burgdorferi ZS7]
gi|221192752|gb|EEE18968.1| ribosomal protein S18 [Borrelia burgdorferi 72a]
gi|224512133|gb|EEF82524.1| ribosomal protein S18 [Borrelia burgdorferi WI91-23]
gi|225369556|gb|EEG99007.1| ribosomal protein S18 [Borrelia burgdorferi 118a]
gi|225371001|gb|EEH00431.1| ribosomal protein S18 [Borrelia sp. SV1]
gi|226232566|gb|EEH31320.1| ribosomal protein S18 [Borrelia burgdorferi Bol26]
gi|226233911|gb|EEH32634.1| ribosomal protein S18 [Borrelia burgdorferi 29805]
gi|312149769|gb|ADQ29840.1| ribosomal protein S18 [Borrelia burgdorferi N40]
Length = 96
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|302543826|ref|ZP_07296168.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|302461444|gb|EFL24537.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
Length = 80
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR++ PL G +DYKD LL +F+S RGKI R++ V+ ++QR++A+AIK AR +
Sbjct: 14 RRRANPLDAAGITYVDYKDTDLLRKFISDRGKIRSRRVTHVTRRQQRQIARAIKNAREMA 73
Query: 77 LIAY 80
LI Y
Sbjct: 74 LIPY 77
>gi|289523469|ref|ZP_06440323.1| ribosomal protein S18 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503161|gb|EFD24325.1| ribosomal protein S18 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 76
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K C +DYK++ L RFL++RGKI+P R++ K QR+LA+AIKRAR++
Sbjct: 10 RPKVCTFCSNKIEYVDYKNVEQLKRFLTERGKILPHRVTGNCAKHQRQLARAIKRARFMA 69
Query: 77 LIAYV 81
L+ +
Sbjct: 70 LLPFT 74
>gi|124009489|ref|ZP_01694165.1| ribosomal protein S18 [Microscilla marina ATCC 23134]
gi|123984938|gb|EAY24901.1| ribosomal protein S18 [Microscilla marina ATCC 23134]
Length = 83
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P RI+ S K QR++++A+KRAR+
Sbjct: 12 ENRKKYCRFKKNGIKYIDYKDPNFLLKFVNDQGKILPRRITGTSLKYQRKVSQAVKRARH 71
Query: 75 LGLIAYV 81
L L+ YV
Sbjct: 72 LALLPYV 78
>gi|219684867|ref|ZP_03539809.1| ribosomal protein S18 [Borrelia garinii PBr]
gi|219685376|ref|ZP_03540195.1| ribosomal protein S18 [Borrelia garinii Far04]
gi|224532127|ref|ZP_03672759.1| ribosomal protein S18 [Borrelia valaisiana VS116]
gi|219671812|gb|EED28867.1| ribosomal protein S18 [Borrelia garinii PBr]
gi|219673149|gb|EED30169.1| ribosomal protein S18 [Borrelia garinii Far04]
gi|224511592|gb|EEF81998.1| ribosomal protein S18 [Borrelia valaisiana VS116]
Length = 96
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|299143652|ref|ZP_07036732.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518137|gb|EFI41876.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 74
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P +IDYKDI LL ++S+RGKI+P RI+ +S K QR + AI
Sbjct: 1 MQRRFRPRKKVDPFEKDKTKKIDYKDIALLRNYISERGKILPRRITGLSAKHQRAITTAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQVALLPY 71
>gi|170077198|ref|YP_001733836.1| 30S ribosomal protein S18 [Synechococcus sp. PCC 7002]
gi|169884867|gb|ACA98580.1| ribosomal protein S18 [Synechococcus sp. PCC 7002]
Length = 71
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 42/52 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR++ AIKRAR L L+ ++N
Sbjct: 17 IDYKDVELLRKFITERGKILPRRITGLTARQQRDVNTAIKRARMLALLPFIN 68
>gi|118411132|ref|YP_874526.1| 30S ribosomal protein S18 [Thalassiosira pseudonana]
gi|224015780|ref|XP_002297538.1| RR18, ribosomal protein 18 30S small ribosomal subunit,
chloroplast, translation, protein biosynthesis
[Thalassiosira pseudonana CCMP1335]
gi|125987698|sp|A0T0R4|RR18_THAPS RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116739879|gb|ABK20749.1| 30S ribosomal protein S18 [Thalassiosira pseudonana]
gi|220967802|gb|EED86178.1| RR18, ribosomal protein 18 30S small ribosomal subunit,
chloroplast, translation, protein biosynthesis
[Thalassiosira pseudonana CCMP1335]
Length = 72
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K P+ +IDYKDI LL F++++GKI+P R + V+ ++QR+LAKAIKRAR
Sbjct: 2 LAQKQKLAPIGIN--QKIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQLAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L+ +V
Sbjct: 60 ILSLLPFV 67
>gi|313888625|ref|ZP_07822290.1| ribosomal protein S18 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845354|gb|EFR32750.1| ribosomal protein S18 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 74
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P +IDYKD+ L ++S RGKI+P RI+ ++ K QRE+ AI
Sbjct: 1 MQRRFGRRKKVDPFEKDKTKKIDYKDVETLRNYISDRGKILPRRITGLNAKHQREMTVAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQIALLPY 71
>gi|16331711|ref|NP_442439.1| 30S ribosomal protein S18 [Synechocystis sp. PCC 6803]
gi|1350950|sp|P48946|RS18_SYNY3 RecName: Full=30S ribosomal protein S18
gi|1001265|dbj|BAA10509.1| 30S ribosomal protein S18 [Synechocystis sp. PCC 6803]
Length = 71
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R++ PL IDYKD LL +F+++RGKI+P RI+ ++ K+QR+L A+KR+R +
Sbjct: 4 YRKRLSPLPPNQP--IDYKDTELLRKFITERGKILPRRITGLTAKQQRDLTTAVKRSRLV 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|312889160|ref|ZP_07748717.1| SSU ribosomal protein S18P [Mucilaginibacter paludis DSM 18603]
gi|311298322|gb|EFQ75434.1| SSU ribosomal protein S18P [Mucilaginibacter paludis DSM 18603]
Length = 87
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GK++P R++ S K QR++A+A+KR+R+
Sbjct: 16 DNRKKYCRFKKNGIKYIDYKDANFLLKFINDQGKLLPRRLTGTSLKFQRKVAQAVKRSRH 75
Query: 75 LGLIAYVN 82
+GL+ YV
Sbjct: 76 IGLLPYVT 83
>gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC
51172]
gi|227235569|gb|EEI85584.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC
51172]
Length = 74
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKR
Sbjct: 3 RRFKPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAIKR 62
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 63 ARQVALLPY 71
>gi|152997467|ref|YP_001342302.1| 30S ribosomal protein S18 [Marinomonas sp. MWYL1]
gi|189029680|sp|A6W0Y8|RS18_MARMS RecName: Full=30S ribosomal protein S18
gi|150838391|gb|ABR72367.1| ribosomal protein S18 [Marinomonas sp. MWYL1]
Length = 76
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ ++ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYIAILPYTD 72
>gi|315640348|ref|ZP_07895464.1| 30S ribosomal protein S18 [Enterococcus italicus DSM 15952]
gi|315483884|gb|EFU74364.1| 30S ribosomal protein S18 [Enterococcus italicus DSM 15952]
Length = 78
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L+ +DYKDI LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+ +
Sbjct: 17 LAANHIEHVDYKDIELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLPFAT 76
>gi|153803832|ref|ZP_01958418.1| ribosomal protein S18 [Vibrio cholerae MZO-3]
gi|124120630|gb|EAY39373.1| ribosomal protein S18 [Vibrio cholerae MZO-3]
Length = 64
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKRARY
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRARY 64
>gi|58584758|ref|YP_198331.1| 30S ribosomal protein S18 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75507965|sp|Q5GSD5|RS18_WOLTR RecName: Full=30S ribosomal protein S18
gi|58419074|gb|AAW71089.1| Ribosomal protein S18 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 91
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K CPL+ IDYK+ LL+RF S G+I+P R++ V KKQR+L AI RAR+L
Sbjct: 23 RSKVCPLATSQDEDIDYKNTDLLSRFTSDYGRILPRRLTGVCAKKQRKLRLAIIRARFLA 82
Query: 77 LIAYV 81
L+ Y
Sbjct: 83 LVPYC 87
>gi|311070629|ref|YP_003975552.1| 30S ribosomal protein S18 [Bacillus atrophaeus 1942]
gi|310871146|gb|ADP34621.1| 30S ribosomal protein S18 [Bacillus atrophaeus 1942]
Length = 79
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIK +R + L+ Y
Sbjct: 16 CYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTAAIKLSRQMALLPY 75
Query: 81 VN 82
V
Sbjct: 76 VT 77
>gi|325261132|ref|ZP_08127870.1| ribosomal protein S18 [Clostridium sp. D5]
gi|324032586|gb|EGB93863.1| ribosomal protein S18 [Clostridium sp. D5]
Length = 88
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++
Sbjct: 22 RKKVCVFCGKENNDIDYKDVVKLKKYISERGKILPRRITGNCAKHQRALTVAIKRARHIA 81
Query: 77 LIAYVN 82
L+ YV
Sbjct: 82 LMPYVQ 87
>gi|194246576|ref|YP_002004215.1| 30S ribosomal protein S18 [Candidatus Phytoplasma mali]
gi|193806933|emb|CAP18365.1| SSU ribosomal protein S18P [Candidatus Phytoplasma mali]
Length = 78
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +ID+KDI LL +F++++GKI+P RI+ S QR LA AIKRAR++ L+ +
Sbjct: 16 CYFTDNKITKIDFKDIELLKKFITEQGKIIPKRITGTSAIWQRRLAIAIKRARHMALLPF 75
Query: 81 V 81
+
Sbjct: 76 I 76
>gi|210634873|ref|ZP_03298348.1| hypothetical protein COLSTE_02277 [Collinsella stercoris DSM
13279]
gi|210158588|gb|EEA89559.1| hypothetical protein COLSTE_02277 [Collinsella stercoris DSM
13279]
Length = 88
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +G IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 11 RRKYCQFCKEGTEYIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYA 75
>gi|73539550|ref|YP_299917.1| 30S ribosomal protein S18 [Ralstonia eutropha JMP134]
gi|123773854|sp|Q46P61|RS182_RALEJ RecName: Full=30S ribosomal protein S18 2
gi|72122887|gb|AAZ65073.1| SSU ribosomal protein S18P [Ralstonia eutropha JMP134]
Length = 92
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L AIKRAR+L
Sbjct: 23 RKRYCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLNTAIKRARFLA 82
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 83 LLPYTDL 89
>gi|54310417|ref|YP_131437.1| putative ribosomal protein S18 [Photobacterium profundum SS9]
gi|90414462|ref|ZP_01222438.1| putative ribosomal protein S18 [Photobacterium profundum 3TCK]
gi|59798724|sp|Q6LM43|RS18_PHOPR RecName: Full=30S ribosomal protein S18
gi|46914858|emb|CAG21635.1| putative ribosomal protein S18 [Photobacterium profundum SS9]
gi|90324467|gb|EAS41026.1| putative ribosomal protein S18 [Photobacterium profundum 3TCK]
Length = 75
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEDVQEIDYKDVVTLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|210613749|ref|ZP_03289863.1| hypothetical protein CLONEX_02070 [Clostridium nexile DSM 1787]
gi|210150958|gb|EEA81966.1| hypothetical protein CLONEX_02070 [Clostridium nexile DSM 1787]
Length = 87
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYV 81
L AIKRAR++ L+ YV
Sbjct: 69 LTVAIKRARHIALMPYV 85
>gi|83749657|ref|ZP_00946638.1| SSU ribosomal protein S18P [Ralstonia solanacearum UW551]
gi|207723263|ref|YP_002253662.1| 30s ribosomal protein s18 [Ralstonia solanacearum MolK2]
gi|207743342|ref|YP_002259734.1| 30s ribosomal protein s18 [Ralstonia solanacearum IPO1609]
gi|83723659|gb|EAP70856.1| SSU ribosomal protein S18P [Ralstonia solanacearum UW551]
gi|206588461|emb|CAQ35424.1| 30s ribosomal protein s18 [Ralstonia solanacearum MolK2]
gi|206594739|emb|CAQ61666.1| 30s ribosomal protein s18 [Ralstonia solanacearum IPO1609]
Length = 95
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 26 RKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRSHYQRQLDTAIKRARFLA 85
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 86 LMPYTD 91
>gi|325662894|ref|ZP_08151463.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086618|ref|ZP_08335696.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470946|gb|EGC74175.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330410451|gb|EGG89883.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 87
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYV 81
L AIKRAR++ L+ YV
Sbjct: 69 LTVAIKRARHIALMPYV 85
>gi|260584271|ref|ZP_05852018.1| 30S ribosomal protein S18 [Granulicatella elegans ATCC 700633]
gi|260157789|gb|EEW92858.1| 30S ribosomal protein S18 [Granulicatella elegans ATCC 700633]
Length = 80
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL R++S++GKI+P R++ K QR L AIKRAR +GL
Sbjct: 14 KKVCYFTANHITYIDYKDVELLKRYISEKGKILPRRVTGTCAKYQRLLTVAIKRARIMGL 73
Query: 78 IAYVNL 83
+ + +
Sbjct: 74 LPFTTV 79
>gi|213962614|ref|ZP_03390875.1| ribosomal protein S18 [Capnocytophaga sputigena Capno]
gi|256820494|ref|YP_003141773.1| 30S ribosomal protein S18 [Capnocytophaga ochracea DSM 7271]
gi|315223595|ref|ZP_07865450.1| 30S ribosomal protein S18 [Capnocytophaga ochracea F0287]
gi|213954609|gb|EEB65930.1| ribosomal protein S18 [Capnocytophaga sputigena Capno]
gi|256582077|gb|ACU93212.1| ribosomal protein S18 [Capnocytophaga ochracea DSM 7271]
gi|314946511|gb|EFS98505.1| 30S ribosomal protein S18 [Capnocytophaga ochracea F0287]
Length = 92
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + S ++K C G IDYKD L +F++++GK++P R++ S K QR++A
Sbjct: 14 TPL-NIDTSKQKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKLLPRRLTGTSLKFQRKVA 72
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 73 TAVKRARHLALMPYV 87
>gi|237748617|ref|ZP_04579097.1| 30S ribosomal protein S18 [Oxalobacter formigenes OXCC13]
gi|229379979|gb|EEO30070.1| 30S ribosomal protein S18 [Oxalobacter formigenes OXCC13]
Length = 94
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKDI L F+ + KI+P+R++ QR++ AIKRAR+L
Sbjct: 25 RKKFCRFTAAGVEQIDYKDIDTLKDFIQENCKIMPARLTGTKAHYQRQVDTAIKRARFLA 84
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 85 LLPYTSL 91
>gi|89094156|ref|ZP_01167099.1| 30S ribosomal protein S18 [Oceanospirillum sp. MED92]
gi|89081631|gb|EAR60860.1| 30S ribosomal protein S18 [Oceanospirillum sp. MED92]
Length = 75
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRAR++ L+ Y +
Sbjct: 14 TAEGVQEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARFVALLPYTD 72
>gi|258647410|ref|ZP_05734879.1| ribosomal protein S18 [Prevotella tannerae ATCC 51259]
gi|260852778|gb|EEX72647.1| ribosomal protein S18 [Prevotella tannerae ATCC 51259]
Length = 88
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +FL+++GKI+P R++ S K QR +A+A+KRAR L
Sbjct: 19 RKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRLTGTSLKYQRRVAQAVKRARQLA 78
Query: 77 LIAYVN 82
L+ +V
Sbjct: 79 LLPFVT 84
>gi|184154485|ref|YP_001842825.1| 30S ribosomal protein S18 [Lactobacillus fermentum IFO 3956]
gi|227514127|ref|ZP_03944176.1| ribosomal protein S18 [Lactobacillus fermentum ATCC 14931]
gi|256848498|ref|ZP_05553940.1| ribosomal protein S18 [Lactobacillus coleohominis 101-4-CHN]
gi|260662546|ref|ZP_05863441.1| 30S ribosomal protein S18 [Lactobacillus fermentum 28-3-CHN]
gi|229560042|sp|B2GEV6|RS18_LACF3 RecName: Full=30S ribosomal protein S18
gi|183225829|dbj|BAG26345.1| 30S ribosomal protein S18 [Lactobacillus fermentum IFO 3956]
gi|227087498|gb|EEI22810.1| ribosomal protein S18 [Lactobacillus fermentum ATCC 14931]
gi|256714765|gb|EEU29744.1| ribosomal protein S18 [Lactobacillus coleohominis 101-4-CHN]
gi|260553237|gb|EEX26180.1| 30S ribosomal protein S18 [Lactobacillus fermentum 28-3-CHN]
Length = 78
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+ +V
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRRLTIAIKRARIMGLLPFV 75
>gi|149279559|ref|ZP_01885688.1| 30S ribosomal protein S18 [Pedobacter sp. BAL39]
gi|149229595|gb|EDM34985.1| 30S ribosomal protein S18 [Pedobacter sp. BAL39]
Length = 87
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KR+R+
Sbjct: 16 DNRKKYCRFKKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKFQRKVAQAVKRSRH 75
Query: 75 LGLIAYV 81
+GL+ +V
Sbjct: 76 IGLLPFV 82
>gi|194289921|ref|YP_002005828.1| 30S ribosomal protein s18 [Cupriavidus taiwanensis LMG 19424]
gi|229559981|sp|B3R2P5|RS18_CUPTR RecName: Full=30S ribosomal protein S18
gi|193223756|emb|CAQ69763.1| 30S ribosomal protein S18 [Cupriavidus taiwanensis LMG 19424]
Length = 92
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L AIKRAR+L
Sbjct: 23 RKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 83 LLPYTDL 89
>gi|256618519|ref|ZP_05475365.1| ribosomal protein S18 [Enterococcus faecalis ATCC 4200]
gi|256598046|gb|EEU17222.1| ribosomal protein S18 [Enterococcus faecalis ATCC 4200]
Length = 79
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+ +V+
Sbjct: 25 IDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLPFVS 76
>gi|29374670|ref|NP_813822.1| 30S ribosomal protein S18 [Enterococcus faecalis V583]
gi|227518100|ref|ZP_03948149.1| 30S ribosomal protein S18 [Enterococcus faecalis TX0104]
gi|227555693|ref|ZP_03985740.1| 30S ribosomal protein S18 [Enterococcus faecalis HH22]
gi|229547121|ref|ZP_04435846.1| 30S ribosomal protein S18 [Enterococcus faecalis TX1322]
gi|229550691|ref|ZP_04439416.1| 30S ribosomal protein S18 [Enterococcus faecalis ATCC 29200]
gi|255971557|ref|ZP_05422143.1| ribosomal protein S18 [Enterococcus faecalis T1]
gi|255974530|ref|ZP_05425116.1| ribosomal protein S18 [Enterococcus faecalis T2]
gi|256761862|ref|ZP_05502442.1| ribosomal protein S18 [Enterococcus faecalis T3]
gi|256854989|ref|ZP_05560350.1| ribosomal protein S18 [Enterococcus faecalis T8]
gi|256957007|ref|ZP_05561178.1| ribosomal protein S18 [Enterococcus faecalis DS5]
gi|256960816|ref|ZP_05564987.1| 30S ribosomal protein S18 [Enterococcus faecalis Merz96]
gi|256963991|ref|ZP_05568162.1| 30S ribosomal protein S18 [Enterococcus faecalis HIP11704]
gi|257078684|ref|ZP_05573045.1| 30S ribosomal protein S18 [Enterococcus faecalis JH1]
gi|257081355|ref|ZP_05575716.1| 30S ribosomal protein S18 [Enterococcus faecalis E1Sol]
gi|257084012|ref|ZP_05578373.1| 30S ribosomal protein S18 [Enterococcus faecalis Fly1]
gi|257087842|ref|ZP_05582203.1| ribosomal protein S18 [Enterococcus faecalis D6]
gi|257088494|ref|ZP_05582855.1| 30S ribosomal protein S18 [Enterococcus faecalis CH188]
gi|257417434|ref|ZP_05594428.1| ribosomal protein S18 [Enterococcus faecalis AR01/DG]
gi|257418834|ref|ZP_05595828.1| 30S ribosomal protein S18 [Enterococcus faecalis T11]
gi|257421351|ref|ZP_05598341.1| 30S ribosomal protein S18 [Enterococcus faecalis X98]
gi|293382654|ref|ZP_06628582.1| ribosomal protein S18 [Enterococcus faecalis R712]
gi|293387934|ref|ZP_06632470.1| ribosomal protein S18 [Enterococcus faecalis S613]
gi|294780772|ref|ZP_06746130.1| ribosomal protein S18 [Enterococcus faecalis PC1.1]
gi|300861749|ref|ZP_07107829.1| ribosomal protein S18 [Enterococcus faecalis TUSoD Ef11]
gi|307268925|ref|ZP_07550289.1| ribosomal protein S18 [Enterococcus faecalis TX4248]
gi|307274020|ref|ZP_07555230.1| ribosomal protein S18 [Enterococcus faecalis TX0855]
gi|307276491|ref|ZP_07557611.1| ribosomal protein S18 [Enterococcus faecalis TX2134]
gi|307284067|ref|ZP_07564237.1| ribosomal protein S18 [Enterococcus faecalis TX0860]
gi|307287173|ref|ZP_07567244.1| ribosomal protein S18 [Enterococcus faecalis TX0109]
gi|307296598|ref|ZP_07576418.1| ribosomal protein S18 [Enterococcus faecalis TX0411]
gi|312901288|ref|ZP_07760571.1| ribosomal protein S18 [Enterococcus faecalis TX0470]
gi|312903115|ref|ZP_07762296.1| ribosomal protein S18 [Enterococcus faecalis TX0635]
gi|312908806|ref|ZP_07767745.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 512]
gi|312951712|ref|ZP_07770606.1| ribosomal protein S18 [Enterococcus faecalis TX0102]
gi|312979552|ref|ZP_07791234.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 516]
gi|59798885|sp|Q839Y8|RS18_ENTFA RecName: Full=30S ribosomal protein S18
gi|29342128|gb|AAO79894.1| ribosomal protein S18 [Enterococcus faecalis V583]
gi|227074448|gb|EEI12411.1| 30S ribosomal protein S18 [Enterococcus faecalis TX0104]
gi|227175151|gb|EEI56123.1| 30S ribosomal protein S18 [Enterococcus faecalis HH22]
gi|229304192|gb|EEN70188.1| 30S ribosomal protein S18 [Enterococcus faecalis ATCC 29200]
gi|229307777|gb|EEN73764.1| 30S ribosomal protein S18 [Enterococcus faecalis TX1322]
gi|255962575|gb|EET95051.1| ribosomal protein S18 [Enterococcus faecalis T1]
gi|255967402|gb|EET98024.1| ribosomal protein S18 [Enterococcus faecalis T2]
gi|256683113|gb|EEU22808.1| ribosomal protein S18 [Enterococcus faecalis T3]
gi|256709502|gb|EEU24549.1| ribosomal protein S18 [Enterococcus faecalis T8]
gi|256947503|gb|EEU64135.1| ribosomal protein S18 [Enterococcus faecalis DS5]
gi|256951312|gb|EEU67944.1| 30S ribosomal protein S18 [Enterococcus faecalis Merz96]
gi|256954487|gb|EEU71119.1| 30S ribosomal protein S18 [Enterococcus faecalis HIP11704]
gi|256986714|gb|EEU74016.1| 30S ribosomal protein S18 [Enterococcus faecalis JH1]
gi|256989385|gb|EEU76687.1| 30S ribosomal protein S18 [Enterococcus faecalis E1Sol]
gi|256992042|gb|EEU79344.1| 30S ribosomal protein S18 [Enterococcus faecalis Fly1]
gi|256995872|gb|EEU83174.1| ribosomal protein S18 [Enterococcus faecalis D6]
gi|256997306|gb|EEU83826.1| 30S ribosomal protein S18 [Enterococcus faecalis CH188]
gi|257159262|gb|EEU89222.1| ribosomal protein S18 [Enterococcus faecalis ARO1/DG]
gi|257160662|gb|EEU90622.1| 30S ribosomal protein S18 [Enterococcus faecalis T11]
gi|257163175|gb|EEU93135.1| 30S ribosomal protein S18 [Enterococcus faecalis X98]
gi|291079960|gb|EFE17324.1| ribosomal protein S18 [Enterococcus faecalis R712]
gi|291082671|gb|EFE19634.1| ribosomal protein S18 [Enterococcus faecalis S613]
gi|294452134|gb|EFG20578.1| ribosomal protein S18 [Enterococcus faecalis PC1.1]
gi|295112348|emb|CBL30985.1| SSU ribosomal protein S18P [Enterococcus sp. 7L76]
gi|300848274|gb|EFK76031.1| ribosomal protein S18 [Enterococcus faecalis TUSoD Ef11]
gi|306495934|gb|EFM65522.1| ribosomal protein S18 [Enterococcus faecalis TX0411]
gi|306501771|gb|EFM71062.1| ribosomal protein S18 [Enterococcus faecalis TX0109]
gi|306503438|gb|EFM72687.1| ribosomal protein S18 [Enterococcus faecalis TX0860]
gi|306506818|gb|EFM75968.1| ribosomal protein S18 [Enterococcus faecalis TX2134]
gi|306509328|gb|EFM78388.1| ribosomal protein S18 [Enterococcus faecalis TX0855]
gi|306514733|gb|EFM83284.1| ribosomal protein S18 [Enterococcus faecalis TX4248]
gi|310625244|gb|EFQ08527.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 512]
gi|310630285|gb|EFQ13568.1| ribosomal protein S18 [Enterococcus faecalis TX0102]
gi|310633506|gb|EFQ16789.1| ribosomal protein S18 [Enterococcus faecalis TX0635]
gi|311287734|gb|EFQ66290.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 516]
gi|311291665|gb|EFQ70221.1| ribosomal protein S18 [Enterococcus faecalis TX0470]
gi|315026669|gb|EFT38601.1| ribosomal protein S18 [Enterococcus faecalis TX2137]
gi|315030114|gb|EFT42046.1| ribosomal protein S18 [Enterococcus faecalis TX4000]
gi|315033548|gb|EFT45480.1| ribosomal protein S18 [Enterococcus faecalis TX0017]
gi|315036371|gb|EFT48303.1| ribosomal protein S18 [Enterococcus faecalis TX0027]
gi|315143587|gb|EFT87603.1| ribosomal protein S18 [Enterococcus faecalis TX2141]
gi|315148275|gb|EFT92291.1| ribosomal protein S18 [Enterococcus faecalis TX4244]
gi|315151299|gb|EFT95315.1| ribosomal protein S18 [Enterococcus faecalis TX0012]
gi|315153725|gb|EFT97741.1| ribosomal protein S18 [Enterococcus faecalis TX0031]
gi|315155115|gb|EFT99131.1| ribosomal protein S18 [Enterococcus faecalis TX0043]
gi|315158755|gb|EFU02772.1| ribosomal protein S18 [Enterococcus faecalis TX0312]
gi|315163339|gb|EFU07356.1| ribosomal protein S18 [Enterococcus faecalis TX0645]
gi|315165719|gb|EFU09736.1| ribosomal protein S18 [Enterococcus faecalis TX1302]
gi|315168228|gb|EFU12245.1| ribosomal protein S18 [Enterococcus faecalis TX1341]
gi|315170504|gb|EFU14521.1| ribosomal protein S18 [Enterococcus faecalis TX1342]
gi|315174174|gb|EFU18191.1| ribosomal protein S18 [Enterococcus faecalis TX1346]
gi|315573983|gb|EFU86174.1| ribosomal protein S18 [Enterococcus faecalis TX0309B]
gi|315578847|gb|EFU91038.1| ribosomal protein S18 [Enterococcus faecalis TX0630]
gi|315581934|gb|EFU94125.1| ribosomal protein S18 [Enterococcus faecalis TX0309A]
gi|323479248|gb|ADX78687.1| ribosomal protein S18 [Enterococcus faecalis 62]
gi|327533862|gb|AEA92696.1| 30S ribosomal protein S18 [Enterococcus faecalis OG1RF]
gi|329576169|gb|EGG57687.1| ribosomal protein S18 [Enterococcus faecalis TX1467]
Length = 79
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+ +V+
Sbjct: 25 IDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLPFVS 76
>gi|332295125|ref|YP_004437048.1| 30S ribosomal protein S18 [Thermodesulfobium narugense DSM 14796]
gi|332178228|gb|AEE13917.1| 30S ribosomal protein S18 [Thermodesulfobium narugense DSM 14796]
Length = 77
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK+C + IDYKD+ L ++LS RGKI+P R + + K QR+L AIKRAR +
Sbjct: 11 RRKACSFCAEKVKYIDYKDVNRLKKYLSDRGKILPKRATGLCAKHQRQLTTAIKRARMIA 70
Query: 77 LIAYV 81
L+ +
Sbjct: 71 LLPFT 75
>gi|218440037|ref|YP_002378366.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7424]
gi|218172765|gb|ACK71498.1| ribosomal protein S18 [Cyanothece sp. PCC 7424]
Length = 71
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 42/52 (80%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
I+YKDI LL +F+++RGKI+P RI+ ++ K+QR+L A+K+AR L L+ ++N
Sbjct: 17 INYKDIELLRKFITERGKILPRRITGLTAKQQRDLTTAVKQARILALLPFIN 68
>gi|299830553|ref|YP_003735001.1| 30S ribosomal protein S18 [Durinskia baltica]
gi|297384917|gb|ADI40216.1| 30S ribosomal protein S18 [Durinskia baltica]
Length = 72
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK P+S +IDYKDI LL F++++GKI+P R + V+ ++QR+L+KAIKRAR L
Sbjct: 5 KRKVSPISFNQ--KIDYKDIDLLTLFVTEQGKILPRRATGVTVQQQRKLSKAIKRARVLS 62
Query: 77 LIAYV 81
L +V
Sbjct: 63 LFPFV 67
>gi|302393056|ref|YP_003828876.1| 30S ribosomal protein S18P [Acetohalobium arabaticum DSM 5501]
gi|302205133|gb|ADL13811.1| SSU ribosomal protein S18P [Acetohalobium arabaticum DSM 5501]
Length = 71
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RKSC IDYK++ L+++L+ RGKIVP RIS + QR+L KAIKRAR + L
Sbjct: 6 RKSCEFCANKIDHIDYKEVNKLDKYLTDRGKIVPRRISGNCARHQRQLTKAIKRARSIAL 65
Query: 78 IAYV 81
+ +
Sbjct: 66 LPFT 69
>gi|256827566|ref|YP_003151525.1| 30S ribosomal protein S18P [Cryptobacterium curtum DSM 15641]
gi|256583709|gb|ACU94843.1| SSU ribosomal protein S18P [Cryptobacterium curtum DSM 15641]
Length = 87
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +G IDYKD ++L ++++ RGKI P R++ + QR++A A+KRAR +
Sbjct: 9 RRKYCQFCKEGTEYIDYKDTQMLRKYVTDRGKIKPRRVTGACTQHQRDIANAVKRAREMA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LMPY 72
>gi|73541692|ref|YP_296212.1| 30S ribosomal protein S18 [Ralstonia eutropha JMP134]
gi|123774065|sp|Q46ZR5|RS181_RALEJ RecName: Full=30S ribosomal protein S18 1
gi|72119105|gb|AAZ61368.1| SSU ribosomal protein S18P [Ralstonia eutropha JMP134]
Length = 92
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L AIKRAR+L
Sbjct: 23 RKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 83 LMPYTDL 89
>gi|94310915|ref|YP_584125.1| 30S ribosomal protein S18 [Cupriavidus metallidurans CH34]
gi|113868253|ref|YP_726742.1| 30S ribosomal protein S18 [Ralstonia eutropha H16]
gi|122946776|sp|Q0K9E7|RS18_RALEH RecName: Full=30S ribosomal protein S18
gi|122987924|sp|Q1LLX0|RS18_RALME RecName: Full=30S ribosomal protein S18
gi|93354767|gb|ABF08856.1| SSU ribosomal protein S18 [Cupriavidus metallidurans CH34]
gi|113527029|emb|CAJ93374.1| SSU ribosomal protein S18 [Ralstonia eutropha H16]
Length = 92
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L AIKRAR+L
Sbjct: 23 RKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 83 LMPYTDL 89
>gi|330850819|ref|YP_004376569.1| 30S ribosomal protein S18 [Fistulifera sp. JPCC DA0580]
gi|328835639|dbj|BAK18935.1| 30S ribosomal protein S18 [Fistulifera sp. JPCC DA0580]
Length = 70
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S ++ S P+S +IDYKDI LL+ F++++GKI+P R + V+ ++QR+LAKAIKRAR
Sbjct: 3 SKKQHSSPISL--TQKIDYKDIDLLSLFVTEQGKILPRRATGVTVQQQRKLAKAIKRARI 60
Query: 75 LGLIAYV 81
L L ++
Sbjct: 61 LSLFPFI 67
>gi|289449911|ref|YP_003475641.1| 30S ribosomal protein S18 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184458|gb|ADC90883.1| ribosomal protein S18 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 90
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L +F+S+RGKI+P R+S K QREL AIKRAR+L L+
Sbjct: 25 KVCNFCADHIETIDYKDVVRLRKFVSERGKILPKRMSGTCAKHQRELTIAIKRARHLALL 84
Query: 79 AYVN 82
++
Sbjct: 85 PFIG 88
>gi|320353929|ref|YP_004195268.1| 30S ribosomal protein S18P [Desulfobulbus propionicus DSM 2032]
gi|320122431|gb|ADW17977.1| SSU ribosomal protein S18P [Desulfobulbus propionicus DSM 2032]
Length = 79
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ V RR+ C IDYKD + L F+++RGKI+P RI K QREL +A+KR
Sbjct: 5 KKVFSRRRVCRFCTDKDVTIDYKDPKTLKNFVTERGKIIPRRIYGTCAKHQRELTEAVKR 64
Query: 72 ARYLGLIAYVN 82
AR L L+ Y+
Sbjct: 65 ARQLALLPYMG 75
>gi|115372930|ref|ZP_01460234.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115370008|gb|EAU68939.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 109
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK PL +D+KD++LL F+++RG+++P R++ V+ ++QR++AKA+KRAR LG
Sbjct: 43 RRKPNPLGN--VRTLDFKDVQLLKYFVTERGRLIPRRLTGVTAQQQRQIAKAVKRARLLG 100
Query: 77 LIAYVN 82
L+ ++
Sbjct: 101 LLPFLQ 106
>gi|225574408|ref|ZP_03783018.1| hypothetical protein RUMHYD_02477 [Blautia hydrogenotrophica DSM
10507]
gi|225038376|gb|EEG48622.1| hypothetical protein RUMHYD_02477 [Blautia hydrogenotrophica DSM
10507]
Length = 87
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ ++ Y
Sbjct: 25 CVFCGKENNEIDYKDVAKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHMAMMPY 84
Query: 81 V 81
V
Sbjct: 85 V 85
>gi|297569121|ref|YP_003690465.1| ribosomal protein S18 [Desulfurivibrio alkaliphilus AHT2]
gi|296925036|gb|ADH85846.1| ribosomal protein S18 [Desulfurivibrio alkaliphilus AHT2]
Length = 79
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ RRK C + IDYKD++ L FL++RGKI+P RI K QR+L++AIK
Sbjct: 4 RKKYFGRRKVCRFCSDKSLAIDYKDVKTLRGFLTERGKIIPRRIYGNCAKHQRQLSEAIK 63
Query: 71 RARYLGLIAYVN 82
RAR + L+ Y
Sbjct: 64 RARQIALLPYTG 75
>gi|226315507|ref|YP_002775403.1| 30S ribosomal protein S18 [Brevibacillus brevis NBRC 100599]
gi|254765413|sp|C0ZA45|RS18_BREBN RecName: Full=30S ribosomal protein S18
gi|226098457|dbj|BAH46899.1| 30S ribosomal protein S18 [Brevibacillus brevis NBRC 100599]
Length = 76
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C IDYKDI LL +F+S+RGKI+P R++ S K QR L AIKR+R
Sbjct: 8 NKRRKVCFFKVNKIKHIDYKDIDLLKKFISERGKILPRRVTGTSAKYQRALTIAIKRSRQ 67
Query: 75 LGLIAYV 81
+ L+ Y
Sbjct: 68 VALLPYT 74
>gi|17546028|ref|NP_519430.1| 30S ribosomal protein S18 [Ralstonia solanacearum GMI1000]
gi|300691703|ref|YP_003752698.1| 30S ribosomal protein S18 [Ralstonia solanacearum PSI07]
gi|300704316|ref|YP_003745919.1| 30S ribosomal protein S18 [Ralstonia solanacearum CFBP2957]
gi|20978684|sp|Q8XZT6|RS18_RALSO RecName: Full=30S ribosomal protein S18
gi|17428323|emb|CAD15011.1| probable 30s ribosomal protein s18 [Ralstonia solanacearum
GMI1000]
gi|299067361|emb|CBJ38560.1| 30S ribosomal protein S18 [Ralstonia solanacearum CMR15]
gi|299071980|emb|CBJ43310.1| 30S ribosomal protein S18 [Ralstonia solanacearum CFBP2957]
gi|299078763|emb|CBJ51423.1| 30S ribosomal protein S18 [Ralstonia solanacearum PSI07]
Length = 92
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 23 RKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRSHYQRQLDTAIKRARFLA 82
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 83 LMPYTD 88
>gi|71891875|ref|YP_277604.1| 30S ribosomal protein S18 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123761484|sp|Q493V4|RS18_BLOPB RecName: Full=30S ribosomal protein S18
gi|71795981|gb|AAZ40732.1| 30S ribosomal subunit protein S18 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 79
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
++ R V HR K C + + IDYKD+ + + + GKI+PSRI+ + QR+LA+A
Sbjct: 4 IMARFVRHR-KFCRFTAEKCINIDYKDLVTIQHSIIESGKIIPSRITGTRARYQRQLARA 62
Query: 69 IKRARYLGLIAYVN 82
IKRARYL L+ Y +
Sbjct: 63 IKRARYLSLLPYTD 76
>gi|51598376|ref|YP_072564.1| 30S ribosomal protein S18 [Borrelia garinii PBi]
gi|59798661|sp|Q662P9|RS18_BORGA RecName: Full=30S ribosomal protein S18
gi|51572947|gb|AAU06972.1| ribosomal protein S18 [Borrelia garinii PBi]
Length = 96
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA +KRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEVKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|302343161|ref|YP_003807690.1| ribosomal protein S18 [Desulfarculus baarsii DSM 2075]
gi|301639774|gb|ADK85096.1| ribosomal protein S18 [Desulfarculus baarsii DSM 2075]
Length = 78
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +IDYKD R L F ++RGKI+P RIS K QREL AIKR+R++
Sbjct: 10 RRKVCRFCADTTIKIDYKDPRTLRYFTTERGKIIPRRISGCCAKHQRELTLAIKRSRHIA 69
Query: 77 LIAY 80
L+ +
Sbjct: 70 LLPF 73
>gi|227500388|ref|ZP_03930450.1| possible ribosomal protein S18 [Anaerococcus tetradius ATCC
35098]
gi|227217451|gb|EEI82770.1| possible ribosomal protein S18 [Anaerococcus tetradius ATCC
35098]
Length = 76
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKRAR +
Sbjct: 10 RKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAIKRARQVA 69
Query: 77 LIAY 80
L+ Y
Sbjct: 70 LLPY 73
>gi|195941851|ref|ZP_03087233.1| 30S ribosomal protein S18 [Borrelia burgdorferi 80a]
gi|223889129|ref|ZP_03623718.1| ribosomal protein S18 [Borrelia burgdorferi 64b]
gi|223885378|gb|EEF56479.1| ribosomal protein S18 [Borrelia burgdorferi 64b]
Length = 96
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYKD L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCRFCDSGK-HPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|71906857|ref|YP_284444.1| SSU ribosomal protein S18P [Dechloromonas aromatica RCB]
gi|71846478|gb|AAZ45974.1| SSU ribosomal protein S18P [Dechloromonas aromatica RCB]
Length = 91
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + +IDYKD+ +L F+ + KI+P+R++ QR+L AIKRAR++
Sbjct: 23 RRKFCRFTAEKVEQIDYKDVDVLKEFIQENAKIMPARLTGTKAGYQRQLGTAIKRARFMA 82
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 83 LLPYTD 88
>gi|126665193|ref|ZP_01736176.1| ribosomal protein S18 [Marinobacter sp. ELB17]
gi|126630563|gb|EBA01178.1| ribosomal protein S18 [Marinobacter sp. ELB17]
Length = 76
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYVTETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYSD 72
>gi|116332690|ref|YP_794217.1| ribosomal protein S18 [Lactobacillus brevis ATCC 367]
gi|122270614|sp|Q03UD6|RS18_LACBA RecName: Full=30S ribosomal protein S18
gi|116098037|gb|ABJ63186.1| SSU ribosomal protein S18P [Lactobacillus brevis ATCC 367]
Length = 78
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKR+R +GL+ +V+
Sbjct: 25 IDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRSRIMGLMPFVS 76
>gi|11465722|ref|NP_053866.1| ribosomal protein S18 [Porphyra purpurea]
gi|1710698|sp|P51256|RR18_PORPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1276722|gb|AAC08142.1| 30S ribosomal protein S18 [Porphyra purpurea]
Length = 70
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K P+ A +DYKDI LL +F++++GKI+P R + ++ K+Q++L KAIK+AR L
Sbjct: 4 YRKKISPIKPTEA--VDYKDIDLLRKFITEQGKILPKRSTGLTSKQQKKLTKAIKQARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFLN 68
>gi|195536238|ref|ZP_03079245.1| ribosomal protein S18 [Francisella tularensis subsp. novicida
FTE]
gi|208779341|ref|ZP_03246687.1| ribosomal protein S18 [Francisella novicida FTG]
gi|194372715|gb|EDX27426.1| ribosomal protein S18 [Francisella tularensis subsp. novicida
FTE]
gi|208745141|gb|EDZ91439.1| ribosomal protein S18 [Francisella novicida FTG]
Length = 59
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L L+ Y +
Sbjct: 4 IDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLALLPYCD 55
>gi|257065997|ref|YP_003152253.1| 30S ribosomal protein S18 [Anaerococcus prevotii DSM 20548]
gi|256797877|gb|ACV28532.1| ribosomal protein S18 [Anaerococcus prevotii DSM 20548]
Length = 75
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKRAR +
Sbjct: 9 RKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAIKRARQVA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|187923778|ref|YP_001895420.1| 30S ribosomal protein S18 [Burkholderia phytofirmans PsJN]
gi|229559973|sp|B2T3N5|RS18_BURPP RecName: Full=30S ribosomal protein S18
gi|187714972|gb|ACD16196.1| ribosomal protein S18 [Burkholderia phytofirmans PsJN]
Length = 91
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 22 RKKFCRFTAANVDHIDYKDLETLKDFIGENGKITPARLTGTKSHYQRQLDTAIKRARFLA 81
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 82 LVPYTD 87
>gi|332529061|ref|ZP_08405026.1| 30S ribosomal protein S18 [Hylemonella gracilis ATCC 19624]
gi|332041505|gb|EGI77866.1| 30S ribosomal protein S18 [Hylemonella gracilis ATCC 19624]
Length = 93
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LLPYTD 89
>gi|291520307|emb|CBK75528.1| SSU ribosomal protein S18P [Butyrivibrio fibrisolvens 16/4]
Length = 84
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + R+K C GK IDYKD L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 13 RRPMHRRKKVCVFCGKDNV-IDYKDTAKLKKYISERGKILPRRITGTCAKHQRALTVAIK 71
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 72 RARHVALMPYV 82
>gi|187932713|ref|YP_001887719.1| 30S ribosomal protein S18 [Clostridium botulinum B str. Eklund
17B]
gi|188587867|ref|YP_001922702.1| 30S ribosomal protein S18 [Clostridium botulinum E3 str. Alaska
E43]
gi|251778070|ref|ZP_04820990.1| 30S ribosomal protein S18 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|187720866|gb|ACD22087.1| 30S ribosomal protein S18 [Clostridium botulinum B str. Eklund
17B]
gi|188498148|gb|ACD51284.1| 30S ribosomal protein S18 [Clostridium botulinum E3 str. Alaska
E43]
gi|243082385|gb|EES48275.1| 30S ribosomal protein S18 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 83
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C A IDYKDI L +++++RGKI+P RIS K QR+L AIKRAR +
Sbjct: 17 KRKVCAFCVDKADSIDYKDINKLRKYVTERGKILPRRISGTCAKHQRQLTDAIKRARNIA 76
Query: 77 LIAYVN 82
L+ +
Sbjct: 77 LLPFTT 82
>gi|110003930|emb|CAK98270.1| 30s ribosomal protein s18 [Spiroplasma citri]
Length = 74
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S G+I+P R++ + K QR LA AIKRAR + L
Sbjct: 9 KKQCYFTKNKITYIDYKDVELLKKFISGNGQILPKRVTGTTAKNQRMLATAIKRARQMAL 68
Query: 78 IAYV 81
+ +V
Sbjct: 69 LPFV 72
>gi|239814826|ref|YP_002943736.1| 30S ribosomal protein S18 [Variovorax paradoxus S110]
gi|319792759|ref|YP_004154399.1| ribosomal protein s18 [Variovorax paradoxus EPS]
gi|259494822|sp|C5CUP2|RS18_VARPS RecName: Full=30S ribosomal protein S18
gi|239801403|gb|ACS18470.1| ribosomal protein S18 [Variovorax paradoxus S110]
gi|315595222|gb|ADU36288.1| ribosomal protein S18 [Variovorax paradoxus EPS]
Length = 93
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+S+ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDIDTLRDFISENGKIIPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MVPYSD 89
>gi|325105010|ref|YP_004274664.1| SSU ribosomal protein S18P [Pedobacter saltans DSM 12145]
gi|324973858|gb|ADY52842.1| SSU ribosomal protein S18P [Pedobacter saltans DSM 12145]
Length = 87
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR
Sbjct: 16 DNRKKYCRFKKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKYQRKVAQAVKRARI 75
Query: 75 LGLIAYVN 82
+G++ +V
Sbjct: 76 IGILPFVT 83
>gi|296393674|ref|YP_003658558.1| 30S ribosomal protein S18 [Segniliparus rotundus DSM 44985]
gi|296180821|gb|ADG97727.1| ribosomal protein S18 [Segniliparus rotundus DSM 44985]
Length = 83
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA P LR + K PL +G ++DYKD LL F+S+RGKI R++ ++ +
Sbjct: 1 MARKPPVKKLRVAEIRKPKKNPLKAQGVEQVDYKDTNLLRTFISERGKIRSRRVTGLTPR 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + N
Sbjct: 61 QQRDVATAVKNAREMALLPFTN 82
>gi|108773338|ref|YP_635893.1| ribosomal protein S18 [Oltmannsiellopsis viridis]
gi|122238313|sp|Q20EV2|RR18_OLTVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|82541920|gb|ABB81961.1| ribosomal protein S18 [Oltmannsiellopsis viridis]
Length = 78
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 23 LSGKGAP---RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
L G P +DYK+I LL +++S GKI+P RI+ ++ K+QR +AKAIK AR +GL+
Sbjct: 12 LKSTGTPFQGTVDYKNIALLRKYISTEGKILPRRITGLTAKQQRAVAKAIKNARMVGLLP 71
Query: 80 YVNL 83
++NL
Sbjct: 72 FINL 75
>gi|325479860|gb|EGC82945.1| ribosomal protein S18 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 75
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKRAR +
Sbjct: 9 RKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREVTRAIKRARQVA 68
Query: 77 LIAY 80
L+ Y
Sbjct: 69 LLPY 72
>gi|251800229|ref|YP_003014960.1| ribosomal protein S18 [Paenibacillus sp. JDR-2]
gi|247547855|gb|ACT04874.1| ribosomal protein S18 [Paenibacillus sp. JDR-2]
Length = 94
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIKRAR
Sbjct: 26 NKRRKVCFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRLLTVAIKRART 85
Query: 75 LGLIAYVN 82
+ L+ Y
Sbjct: 86 VALLPYTT 93
>gi|226968685|ref|YP_002808645.1| small subunit ribosomal protein S18 [Micromonas sp. RCC299]
gi|226431163|gb|ACO55569.1| small subunit ribosomal protein S18 [Micromonas sp. RCC299]
Length = 70
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+++ P++ I+YK++ LL RF++++GKI+P R++ V+ K+QR+LAKA+K+AR LG
Sbjct: 5 RQRTSPINA--GEIINYKNVDLLRRFITEQGKILPRRLTGVTAKQQRQLAKAVKQARILG 62
Query: 77 LIAYV 81
+ ++
Sbjct: 63 FLQFL 67
>gi|152983164|ref|YP_001352993.1| 30S ribosomal protein S18 [Janthinobacterium sp. Marseille]
gi|151283241|gb|ABR91651.1| small subunit ribosomal protein S18 [Janthinobacterium sp.
Marseille]
Length = 94
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + ++DYKD+ L F+ + GKI+P+R++ QR++ AIKRARYL
Sbjct: 25 RKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAIYQRQVDTAIKRARYLA 84
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 85 LLPYTDL 91
>gi|149918391|ref|ZP_01906881.1| ribosomal protein S18 [Plesiocystis pacifica SIR-1]
gi|149820691|gb|EDM80101.1| ribosomal protein S18 [Plesiocystis pacifica SIR-1]
Length = 82
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ +LL FL++RGK++P+RI+ VS ++QR + KAIKRAR L L+ Y
Sbjct: 30 IDYKNPQLLKHFLTERGKVIPARITGVSARQQRAITKAIKRARQLALLPYT 80
>gi|255993995|ref|ZP_05427130.1| ribosomal protein S18 [Eubacterium saphenum ATCC 49989]
gi|255993663|gb|EEU03752.1| ribosomal protein S18 [Eubacterium saphenum ATCC 49989]
Length = 77
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL++F+S+RGKI+P R++ S QRELAKAIK++R + L+ Y
Sbjct: 25 IDYKNVDLLSKFVSERGKILPKRVTGASSAMQRELAKAIKKSRVMALMPYT 75
>gi|168335183|ref|ZP_02693288.1| 30S ribosomal protein S18 (BS21) [Epulopiscium sp. 'N.t.
morphotype B']
Length = 77
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K +G +I+YKDI L +F+S+RGKI+P RI+ S K QR+L AIKRAR++ L+
Sbjct: 13 KVNQFAGDNIKKINYKDINTLKKFISERGKILPRRITGNSAKAQRKLTAAIKRARHIALL 72
Query: 79 AYV 81
Y
Sbjct: 73 PYT 75
>gi|332881934|ref|ZP_08449576.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680169|gb|EGJ53124.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 92
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + S ++K C G IDYKD L +F++++GK++P R++ S K QR++A
Sbjct: 14 TPL-NIDTSKQKKYCRFKKLGIKYIDYKDADFLLKFVNEQGKLLPRRLTGTSLKFQRKVA 72
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 73 TAVKRARHLALMPYV 87
>gi|262065928|ref|ZP_06025540.1| ribosomal protein S18 [Fusobacterium periodonticum ATCC 33693]
gi|291380408|gb|EFE87926.1| ribosomal protein S18 [Fusobacterium periodonticum ATCC 33693]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|315320484|ref|YP_004072540.1| 30S ribosomal protein S18 [Thalassiosira oceanica CCMP1005]
gi|283568957|gb|ADB27494.1| 30S ribosomal protein S18 [Thalassiosira oceanica CCMP1005]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+S + K P+ +IDYKDI LL F++++GKI+P R + V+ ++QR++AKAIKRAR
Sbjct: 2 LSQKHKLAPIGIN--QKIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQIAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L+ +V
Sbjct: 60 VLSLLPFV 67
>gi|78224039|ref|YP_385786.1| 30S ribosomal protein S18 [Geobacter metallireducens GS-15]
gi|123742790|sp|Q39RR3|RS18_GEOMG RecName: Full=30S ribosomal protein S18
gi|78195294|gb|ABB33061.1| SSU ribosomal protein S18P [Geobacter metallireducens GS-15]
Length = 106
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R+L F+++RGKIVP RIS K QRE+ +AIKRAR +
Sbjct: 35 QRRKVCRFCADKDLVIDYKDPRVLRSFITERGKIVPRRISGNCSKHQREITEAIKRARNI 94
Query: 76 GLI 78
LI
Sbjct: 95 ALI 97
>gi|125974670|ref|YP_001038580.1| 30S ribosomal protein S18 [Clostridium thermocellum ATCC 27405]
gi|256004131|ref|ZP_05429115.1| ribosomal protein S18 [Clostridium thermocellum DSM 2360]
gi|281418858|ref|ZP_06249877.1| ribosomal protein S18 [Clostridium thermocellum JW20]
gi|166220948|sp|A3DHF8|RS18_CLOTH RecName: Full=30S ribosomal protein S18
gi|125714895|gb|ABN53387.1| SSU ribosomal protein S18P [Clostridium thermocellum ATCC 27405]
gi|255991879|gb|EEU01977.1| ribosomal protein S18 [Clostridium thermocellum DSM 2360]
gi|281407942|gb|EFB38201.1| ribosomal protein S18 [Clostridium thermocellum JW20]
gi|316941795|gb|ADU75829.1| ribosomal protein S18 [Clostridium thermocellum DSM 1313]
Length = 94
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C RIDYKD+ L +++S+RGKI+P RIS K QR+L AIKRAR++
Sbjct: 28 KKKICAFCVDKVERIDYKDVAKLKKYISERGKILPRRISGNCAKHQRQLTVAIKRARHIA 87
Query: 77 LIAYV 81
L+ Y
Sbjct: 88 LLPYT 92
>gi|206889919|ref|YP_002248636.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741857|gb|ACI20914.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 77
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYK+++LL F+++RGKI+ +++ K QREL KAIKRAR +
Sbjct: 11 RKKYCRFCAEKIDFIDYKNVKLLRGFMTERGKILSRKLTGTCSKHQRELTKAIKRARAVA 70
Query: 77 LIAYVNL 83
L+ Y+ +
Sbjct: 71 LLPYIEI 77
>gi|299830348|ref|YP_003734563.1| ribosomal protein S18 [Kryptoperidinium foliaceum]
gi|297385050|gb|ADI40348.1| ribosomal protein S18 [Kryptoperidinium foliaceum]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK P+S +IDYKDI LL+ F++++GKI+P R + V+ ++QR+L+KAIKRAR L
Sbjct: 5 KRKVSPISLNQ--KIDYKDIDLLSLFVTEQGKILPRRATGVTIQQQRKLSKAIKRARVLS 62
Query: 77 LIAYV 81
L +V
Sbjct: 63 LFPFV 67
>gi|237736139|ref|ZP_04566620.1| SSU ribosomal protein S18P [Fusobacterium mortiferum ATCC 9817]
gi|229421692|gb|EEO36739.1| SSU ribosomal protein S18P [Fusobacterium mortiferum ATCC 9817]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVDLLKRFVSDKGKINPSRVTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|51246448|ref|YP_066332.1| 30S ribosomal protein S18 [Desulfotalea psychrophila LSv54]
gi|59798684|sp|Q6AK01|RS18_DESPS RecName: Full=30S ribosomal protein S18
gi|50877485|emb|CAG37325.1| probable 30S ribosomal protein S18 [Desulfotalea psychrophila
LSv54]
Length = 81
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+AP P ++ + R+K C IDYKD+++L F+S+RGKI+P RI QR
Sbjct: 1 MAPRP--QKKLFTRKKVCRFCADKELVIDYKDVKVLRNFVSERGKIIPRRIVGTCASHQR 58
Query: 64 ELAKAIKRARYLGLIAY 80
+L +A+KRAR + L+ Y
Sbjct: 59 QLCEAVKRARQIALLPY 75
>gi|11467346|ref|NP_043203.1| ribosomal protein S18 [Cyanophora paradoxa]
gi|133835|sp|P15760|RR18_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S18
gi|11400|emb|CAA35533.1| S18 ribosomal protein [Cyanophora paradoxa]
gi|1016147|gb|AAA81234.1| ribosomal protein S18 [Cyanophora paradoxa]
Length = 71
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ PL IDY+D+ LL F++ +GKI+P R++ ++ K+QR + KAIK+AR L
Sbjct: 4 YRRRLSPLKPNQV--IDYQDVELLRTFITDQGKILPRRVTGLTAKQQRAVTKAIKQARVL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|291297665|ref|YP_003508943.1| 30S ribosomal protein S18 [Stackebrandtia nassauensis DSM 44728]
gi|290566885|gb|ADD39850.1| ribosomal protein S18 [Stackebrandtia nassauensis DSM 44728]
Length = 79
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++KS PL +G ID+KD LL +F+S RGKI R++ V+ ++QR++A+A+K AR +
Sbjct: 11 KKKSNPLDKEGITYIDFKDTALLRKFISDRGKIRARRVTGVTAQQQRQIARAVKNAREMA 70
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 71 LLPYTS 76
>gi|331089019|ref|ZP_08337926.1| hypothetical protein HMPREF1025_01509 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406471|gb|EGG85984.1| hypothetical protein HMPREF1025_01509 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 88
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C GK I+YKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++
Sbjct: 22 RKKVCVFCGKENNEINYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRARHIA 81
Query: 77 LIAYVN 82
L+ YV
Sbjct: 82 LMPYVQ 87
>gi|307326229|ref|ZP_07605426.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|306888172|gb|EFN19161.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 80
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ PL G +DYKD LL +F+S RGKI R+S V+ ++QR++A+AIK AR +
Sbjct: 14 RRRVNPLDAAGITYVDYKDTDLLRKFISDRGKIRSRRVSHVTRRQQRQIARAIKNAREMA 73
Query: 77 LIAY 80
L+ Y
Sbjct: 74 LLPY 77
>gi|229829467|ref|ZP_04455536.1| hypothetical protein GCWU000342_01557 [Shuttleworthia satelles
DSM 14600]
gi|229791898|gb|EEP28012.1| hypothetical protein GCWU000342_01557 [Shuttleworthia satelles
DSM 14600]
Length = 76
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK C G IDYKD L +++S+RGKI+P RI+ + QR L AIK
Sbjct: 5 RRPAHRRRKVCVFCGSEVA-IDYKDANQLRKYVSERGKILPRRITGTCARHQRALTSAIK 63
Query: 71 RARYLGLIAYVN 82
RAR+L ++ YV
Sbjct: 64 RARHLAIMPYVE 75
>gi|256826412|ref|YP_003150372.1| 30S ribosomal protein S18 [Kytococcus sedentarius DSM 20547]
gi|256689805|gb|ACV07607.1| SSU ribosomal protein S18P [Kytococcus sedentarius DSM 20547]
Length = 81
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++AKA+K AR +
Sbjct: 13 KKKANPLKAAKVEKIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAVKNAREMA 72
Query: 77 LIAY 80
L+ Y
Sbjct: 73 LLPY 76
>gi|304405909|ref|ZP_07387567.1| ribosomal protein S18 [Paenibacillus curdlanolyticus YK9]
gi|304345152|gb|EFM10988.1| ribosomal protein S18 [Paenibacillus curdlanolyticus YK9]
Length = 92
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ + RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIK
Sbjct: 20 RKGRNKRRKVCFFTVNKIKHIDYKDTDLLRKFISERGKILPRRVTGTSAKYQRLLTVAIK 79
Query: 71 RARYLGLIAYVN 82
R+R + L+ Y
Sbjct: 80 RSRQIALLPYTT 91
>gi|257452936|ref|ZP_05618235.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|257462524|ref|ZP_05626936.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|257466684|ref|ZP_05630995.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
gi|315917837|ref|ZP_07914077.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059477|ref|ZP_07923962.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|317060179|ref|ZP_07924664.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|313685153|gb|EFS21988.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|313685855|gb|EFS22690.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|313691712|gb|EFS28547.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
Length = 72
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVDLLKRFVSDKGKINPSRLTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTKI 70
>gi|218135342|ref|ZP_03464146.1| hypothetical protein BACPEC_03247 [Bacteroides pectinophilus ATCC
43243]
gi|217990727|gb|EEC56738.1| hypothetical protein BACPEC_03247 [Bacteroides pectinophilus ATCC
43243]
Length = 90
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL R++S+RGKI+P RI+ K QR L A+KRAR++ L
Sbjct: 25 KKVCIFCADQSKAIDYKDVNLLKRYVSERGKILPRRITGNCAKHQRALTVAVKRARHIAL 84
Query: 78 IAY 80
+ Y
Sbjct: 85 MPY 87
>gi|104773266|ref|YP_618246.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123252027|sp|Q1GC35|RS18_LACDA RecName: Full=30S ribosomal protein S18
gi|103422347|emb|CAI96855.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 78
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL F+S+RGKI+P ++ S K QR++A AIKRAR +GL+ +V
Sbjct: 25 VDYKDVDLLKHFISERGKILPRSVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|187928273|ref|YP_001898760.1| 30S ribosomal protein S18 [Ralstonia pickettii 12J]
gi|241662846|ref|YP_002981206.1| 30S ribosomal protein S18 [Ralstonia pickettii 12D]
gi|309782228|ref|ZP_07676957.1| ribosomal protein S18 [Ralstonia sp. 5_7_47FAA]
gi|187725163|gb|ACD26328.1| ribosomal protein S18 [Ralstonia pickettii 12J]
gi|240864873|gb|ACS62534.1| ribosomal protein S18 [Ralstonia pickettii 12D]
gi|308918999|gb|EFP64667.1| ribosomal protein S18 [Ralstonia sp. 5_7_47FAA]
Length = 95
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 26 RKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRAIYQRQLDTAIKRARFLA 85
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 86 LMPYTD 91
>gi|225016117|ref|ZP_03705350.1| hypothetical protein CLOSTMETH_00061 [Clostridium methylpentosum
DSM 5476]
gi|224951114|gb|EEG32323.1| hypothetical protein CLOSTMETH_00061 [Clostridium methylpentosum
DSM 5476]
Length = 77
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKDI L R++S+R KIVP R++ + QR+L A+KRAR+L
Sbjct: 11 RKKVCAFCVDKVENIDYKDIAKLRRYMSERAKIVPRRVTGTCARHQRQLTVAVKRARHLA 70
Query: 77 LIAYVN 82
++ Y++
Sbjct: 71 MLPYIS 76
>gi|15896953|ref|NP_350302.1| 30S ribosomal protein S18 [Clostridium acetobutylicum ATCC 824]
gi|20978716|sp|Q97CX4|RS18_CLOAB RecName: Full=30S ribosomal protein S18
gi|15026828|gb|AAK81642.1|AE007867_9 Ribosomal protein S18 [Clostridium acetobutylicum ATCC 824]
gi|325511130|gb|ADZ22766.1| 30S ribosomal protein S18 [Clostridium acetobutylicum EA 2018]
Length = 90
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN +RK C + + IDYKDI L +++++RGKI+P RIS K QREL AIKR
Sbjct: 19 RNRKMKRKICSFCMEKSESIDYKDINKLRKYVTERGKILPRRISGNCAKHQRELTIAIKR 78
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 79 ARNIALLPFT 88
>gi|15674171|ref|NP_268346.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis
Il1403]
gi|116513137|ref|YP_812044.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
SK11]
gi|125625229|ref|YP_001033712.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492845|ref|YP_003354825.1| 50S ribosomal protein S18P [Lactococcus lactis subsp. lactis
KF147]
gi|13878750|sp|Q9CDN0|RS18_LACLA RecName: Full=30S ribosomal protein S18
gi|122939895|sp|Q02VU1|RS18_LACLS RecName: Full=30S ribosomal protein S18
gi|166220956|sp|A2RNZ2|RS18_LACLM RecName: Full=30S ribosomal protein S18
gi|12725253|gb|AAK06287.1|AE006448_5 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis
Il1403]
gi|116108791|gb|ABJ73931.1| SSU ribosomal protein S18P [Lactococcus lactis subsp. cremoris
SK11]
gi|124494037|emb|CAL99037.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376497|gb|ADA65983.1| SSU ribosomal protein S18P [Lactococcus lactis subsp. lactis
KF147]
gi|300072039|gb|ADJ61439.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|326407763|gb|ADZ64834.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis CV56]
Length = 81
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+ +V
Sbjct: 26 VDYKDTELLKRFISERGKILPRRVTGTSAKNQRKVVNAIKRARVMALLPFV 76
>gi|295108217|emb|CBL22170.1| SSU ribosomal protein S18P [Ruminococcus obeum A2-162]
Length = 87
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L A+KRAR+L L+ Y
Sbjct: 25 CVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRALTVAVKRARHLSLMPY 84
Query: 81 V 81
V
Sbjct: 85 V 85
>gi|19704977|ref|NP_602472.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|34763885|ref|ZP_00144789.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237742686|ref|ZP_04573167.1| SSU ribosomal protein S18P [Fusobacterium sp. 4_1_13]
gi|237743347|ref|ZP_04573828.1| SSU ribosomal protein S18P [Fusobacterium sp. 7_1]
gi|256028465|ref|ZP_05442299.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|256846081|ref|ZP_05551539.1| ribosomal protein S18 [Fusobacterium sp. 3_1_36A2]
gi|260495033|ref|ZP_05815162.1| ribosomal protein S18 [Fusobacterium sp. 3_1_33]
gi|289766386|ref|ZP_06525764.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|294784789|ref|ZP_06750077.1| ribosomal protein S18 [Fusobacterium sp. 3_1_27]
gi|296329232|ref|ZP_06871733.1| 30S ribosomal protein S18 [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|22257028|sp|Q8RIE4|RS18_FUSNN RecName: Full=30S ribosomal protein S18
gi|19712881|gb|AAL93771.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|27886348|gb|EAA23619.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229430334|gb|EEO40546.1| SSU ribosomal protein S18P [Fusobacterium sp. 4_1_13]
gi|229433126|gb|EEO43338.1| SSU ribosomal protein S18P [Fusobacterium sp. 7_1]
gi|256719640|gb|EEU33195.1| ribosomal protein S18 [Fusobacterium sp. 3_1_36A2]
gi|260197476|gb|EEW94994.1| ribosomal protein S18 [Fusobacterium sp. 3_1_33]
gi|289717941|gb|EFD81953.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|294486503|gb|EFG33865.1| ribosomal protein S18 [Fusobacterium sp. 3_1_27]
gi|296153588|gb|EFG94405.1| 30S ribosomal protein S18 [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 72
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR++AKA+KRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAVKRARN 61
Query: 75 LGLIAYV 81
+ LI Y
Sbjct: 62 IALIPYT 68
>gi|167766039|ref|ZP_02438092.1| hypothetical protein CLOSS21_00532 [Clostridium sp. SS2/1]
gi|317499404|ref|ZP_07957671.1| ribosomal protein S18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712119|gb|EDS22698.1| hypothetical protein CLOSS21_00532 [Clostridium sp. SS2/1]
gi|291559997|emb|CBL38797.1| SSU ribosomal protein S18P [butyrate-producing bacterium SSC/2]
gi|316893276|gb|EFV15491.1| ribosomal protein S18 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 84
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
+P+ RR RRK C + IDYKD+ L +++S+RGKI+P RI+ K QR +
Sbjct: 8 SPMRRRGGRRRRKVCAFCTEADAVIDYKDVATLKKYVSERGKILPRRITGTCAKHQRAVT 67
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR+L L+ Y
Sbjct: 68 GAIKRARHLALMPYT 82
>gi|167773044|ref|ZP_02445097.1| hypothetical protein ANACOL_04433 [Anaerotruncus colihominis DSM
17241]
gi|167664977|gb|EDS09107.1| hypothetical protein ANACOL_04433 [Anaerotruncus colihominis DSM
17241]
Length = 86
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R N R+K C IDYKD+ L R+LS+R KIVP R++ + QR+L AIK
Sbjct: 14 RGNRKGRKKVCAFCVDKLGPIDYKDVPRLRRYLSERAKIVPRRVTGTCARHQRQLTLAIK 73
Query: 71 RARYLGLIAYVN 82
RAR++GL+ Y++
Sbjct: 74 RARHIGLLPYIS 85
>gi|237739060|ref|ZP_04569541.1| SSU ribosomal protein S18P [Fusobacterium sp. 2_1_31]
gi|254303426|ref|ZP_04970784.1| ribosomal protein S18 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|294783934|ref|ZP_06749256.1| ribosomal protein S18 [Fusobacterium sp. 1_1_41FAA]
gi|148323618|gb|EDK88868.1| ribosomal protein S18 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|229423660|gb|EEO38707.1| SSU ribosomal protein S18P [Fusobacterium sp. 2_1_31]
gi|294479746|gb|EFG27525.1| ribosomal protein S18 [Fusobacterium sp. 1_1_41FAA]
Length = 72
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR++AKA+KRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAVKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|189425664|ref|YP_001952841.1| 30S ribosomal protein S18 [Geobacter lovleyi SZ]
gi|226735121|sp|B3E6H4|RS18_GEOLS RecName: Full=30S ribosomal protein S18
gi|189421923|gb|ACD96321.1| ribosomal protein S18 [Geobacter lovleyi SZ]
Length = 110
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C + IDYKD R L F+++RGKIVP RIS K QRE+ +AIKRAR L
Sbjct: 39 QRRKVCRFCAEKDTTIDYKDPRTLRYFITERGKIVPRRISGNCSKHQREITEAIKRARNL 98
Query: 76 GLI 78
L+
Sbjct: 99 ALL 101
>gi|253581412|ref|ZP_04858638.1| ribosomal protein S18 [Fusobacterium varium ATCC 27725]
gi|257470800|ref|ZP_05634890.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
gi|317065004|ref|ZP_07929489.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
gi|251836776|gb|EES65310.1| ribosomal protein S18 [Fusobacterium varium ATCC 27725]
gi|313690680|gb|EFS27515.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
Length = 72
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L K A IDYK++ LL RF+S +GKI PSR++ + K QR +AKAIKRAR
Sbjct: 3 EFRRRRAKLRVK-AEEIDYKNVDLLKRFVSDKGKINPSRVTGANAKLQRRIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|319943303|ref|ZP_08017586.1| 50S ribosomal protein L21 [Lautropia mirabilis ATCC 51599]
gi|319743845|gb|EFV96249.1| 50S ribosomal protein L21 [Lautropia mirabilis ATCC 51599]
Length = 91
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + + IDYKD+ L F++++GKI+P+R++ QR+L AI+RAR+L
Sbjct: 24 RKKFCRFTAEKVEWIDYKDVDTLKDFVTEQGKIIPARLTGTRAHYQRQLGVAIRRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LMPYTD 89
>gi|329913487|ref|ZP_08275956.1| SSU ribosomal protein S18p [Oxalobacteraceae bacterium IMCC9480]
gi|327545345|gb|EGF30580.1| SSU ribosomal protein S18p [Oxalobacteraceae bacterium IMCC9480]
Length = 96
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + ++DYKD+ L F+ + GKI+P+R++ QR++ AIKRAR+L
Sbjct: 27 RKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTRAHYQRQVDTAIKRARFLA 86
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 87 LLPYTDL 93
>gi|307325551|ref|ZP_07604752.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|306888679|gb|EFN19664.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 94
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G+ IDYKD LL +F+S RGKI R++ VS ++QR+LA+AIK AR + L+ Y
Sbjct: 33 PLDKAGSTYIDYKDTELLRKFISDRGKIRGRRVTRVSAQQQRQLARAIKNAREMALLPY 91
>gi|159903436|ref|YP_001550780.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9211]
gi|159888612|gb|ABX08826.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9211]
Length = 73
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD+ L +F+++RGKI+P R++ ++ ++QR+L A+KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDVETLKKFITERGKILPRRLTGLTAQQQRDLTVAVKRARIIALLPFVN 70
>gi|42560585|ref|NP_975036.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|331703042|ref|YP_004399729.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|59798739|sp|Q6MUK6|RS18_MYCMS RecName: Full=30S ribosomal protein S18
gi|42492081|emb|CAE76678.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|256384267|gb|ACU78837.1| ribosomal protein S18 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256385100|gb|ACU79669.1| ribosomal protein S18 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455226|gb|ADH21461.1| ribosomal protein S18 [synthetic Mycoplasma mycoides JCVI-syn1.0]
gi|301320649|gb|ADK69292.1| ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
gi|328801597|emb|CBW53750.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 75
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKDI LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+ YV
Sbjct: 23 IDYKDIELLKKFISPNGQILPRRITGTSPKDQRQLALAIKRARQMALLPYV 73
>gi|269837478|ref|YP_003319706.1| 30S ribosomal protein S18 [Sphaerobacter thermophilus DSM 20745]
gi|269786741|gb|ACZ38884.1| ribosomal protein S18 [Sphaerobacter thermophilus DSM 20745]
Length = 128
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C G +DYKDI L R++S+RGKI P R + K QR LA AIKRAR++
Sbjct: 63 RRKVCGFCMDGIGEVDYKDIGRLRRYISERGKIEPRRQTGTCAKHQRSLAVAIKRARHVA 122
Query: 77 LIAYVN 82
L+ +
Sbjct: 123 LLPFTQ 128
>gi|121607971|ref|YP_995778.1| 30S ribosomal protein S18 [Verminephrobacter eiseniae EF01-2]
gi|241764689|ref|ZP_04762701.1| ribosomal protein S18 [Acidovorax delafieldii 2AN]
gi|166222255|sp|A1WGK3|RS18_VEREI RecName: Full=30S ribosomal protein S18
gi|121552611|gb|ABM56760.1| SSU ribosomal protein S18P [Verminephrobacter eiseniae EF01-2]
gi|241365859|gb|EER60508.1| ribosomal protein S18 [Acidovorax delafieldii 2AN]
Length = 93
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVTGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIFQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LVPYSD 89
>gi|182416746|ref|ZP_02948143.1| ribosomal protein S18 [Clostridium butyricum 5521]
gi|237669618|ref|ZP_04529596.1| ribosomal protein S18 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379403|gb|EDT76898.1| ribosomal protein S18 [Clostridium butyricum 5521]
gi|237654852|gb|EEP52414.1| ribosomal protein S18 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 85
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C A IDYKDI L +++++RGKI+P RIS K QREL +IKRAR +
Sbjct: 19 RKKVCAFCVDKAEFIDYKDINKLRKYVTERGKILPRRISGTCAKHQRELTTSIKRARNIA 78
Query: 77 LIAYV 81
L+ +
Sbjct: 79 LLPFT 83
>gi|167760811|ref|ZP_02432938.1| hypothetical protein CLOSCI_03196 [Clostridium scindens ATCC
35704]
gi|167661698|gb|EDS05828.1| hypothetical protein CLOSCI_03196 [Clostridium scindens ATCC
35704]
Length = 88
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHVALMPY 85
Query: 81 V 81
V
Sbjct: 86 V 86
>gi|24214377|ref|NP_711858.1| 30S ribosomal protein S18 [Leptospira interrogans serovar Lai str.
56601]
gi|304570496|ref|YP_002045.2| 30S ribosomal protein S18 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24195312|gb|AAN48876.1| 30S ribosomal protein S18 [Leptospira interrogans serovar Lai str.
56601]
Length = 103
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSG--KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
AE+ P ++N +++K C + + A +I+YK+I LL RF++ RGKI+P RI+ S
Sbjct: 21 AEMEGKPQRKQN-KYKKKVCRFTADPELAKQINYKNIELLERFITNRGKIIPRRITGTSA 79
Query: 60 KKQRELAKAIKRARYLGLIAY 80
+ QR LA+ I++AR +GL+ Y
Sbjct: 80 RYQRVLAREIRKARSIGLLPY 100
>gi|298345837|ref|YP_003718524.1| putative 30S ribosomal protein S18 [Mobiluncus curtisii ATCC
43063]
gi|304390460|ref|ZP_07372413.1| 30S ribosomal protein S18 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315654410|ref|ZP_07907318.1| ribosomal protein S18 [Mobiluncus curtisii ATCC 51333]
gi|315657668|ref|ZP_07910550.1| ribosomal protein S18 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235898|gb|ADI67030.1| possible 30S ribosomal protein S18 [Mobiluncus curtisii ATCC
43063]
gi|304326216|gb|EFL93461.1| 30S ribosomal protein S18 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315491445|gb|EFU81062.1| ribosomal protein S18 [Mobiluncus curtisii ATCC 51333]
gi|315492140|gb|EFU81749.1| ribosomal protein S18 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 81
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K+ PL + IDYKD LL +F+S RGKI R++ VS ++QR++AKA+K AR +
Sbjct: 13 KKKTNPLKAQKVGNIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAVKNAREMA 72
Query: 77 LIAY 80
L+ Y
Sbjct: 73 LLPY 76
>gi|145588609|ref|YP_001155206.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189029683|sp|A4SVX8|RS18_POLSQ RecName: Full=30S ribosomal protein S18
gi|145047015|gb|ABP33642.1| SSU ribosomal protein S18P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 90
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A PL +R ++ C + G +IDYKD+ L F+ + KI P+R++ K QR+
Sbjct: 14 AQNPLFKR-----KRYCRFTVAGVEQIDYKDVDTLKDFIGENAKITPARLTGTKAKYQRQ 68
Query: 65 LAKAIKRARYLGLIAYVN 82
L AIKRARYL L+ + +
Sbjct: 69 LDTAIKRARYLALLPFSD 86
>gi|120609917|ref|YP_969595.1| 30S ribosomal protein S18 [Acidovorax citrulli AAC00-1]
gi|319763794|ref|YP_004127731.1| ribosomal protein s18 [Alicycliphilus denitrificans BC]
gi|326316064|ref|YP_004233736.1| 30S ribosomal protein S18 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|330823942|ref|YP_004387245.1| 30S ribosomal protein S18 [Alicycliphilus denitrificans K601]
gi|166220916|sp|A1TLI3|RS18_ACIAC RecName: Full=30S ribosomal protein S18
gi|120588381|gb|ABM31821.1| SSU ribosomal protein S18P [Acidovorax citrulli AAC00-1]
gi|317118355|gb|ADV00844.1| ribosomal protein S18 [Alicycliphilus denitrificans BC]
gi|323372900|gb|ADX45169.1| 30S ribosomal protein S18 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|329309314|gb|AEB83729.1| 30S ribosomal protein S18 [Alicycliphilus denitrificans K601]
Length = 93
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LVPYSD 89
>gi|160940069|ref|ZP_02087414.1| hypothetical protein CLOBOL_04958 [Clostridium bolteae ATCC
BAA-613]
gi|239624860|ref|ZP_04667891.1| ribosomal protein S18 [Clostridiales bacterium 1_7_47_FAA]
gi|158436649|gb|EDP14416.1| hypothetical protein CLOBOL_04958 [Clostridium bolteae ATCC
BAA-613]
gi|239521246|gb|EEQ61112.1| ribosomal protein S18 [Clostridiales bacterium 1_7_47FAA]
Length = 89
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L
Sbjct: 24 KKVCVFCGDKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIAL 83
Query: 78 IAYV 81
+ Y
Sbjct: 84 MPYT 87
>gi|160900659|ref|YP_001566241.1| 30S ribosomal protein S18 [Delftia acidovorans SPH-1]
gi|229559982|sp|A9BNG1|RS18_DELAS RecName: Full=30S ribosomal protein S18
gi|160366243|gb|ABX37856.1| ribosomal protein S18 [Delftia acidovorans SPH-1]
Length = 93
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+ + GKIVP+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDVDTLRDFIGENGKIVPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LVPYSD 89
>gi|111114935|ref|YP_709553.1| 30S ribosomal protein S18 [Borrelia afzelii PKo]
gi|216263818|ref|ZP_03435812.1| ribosomal protein S18 [Borrelia afzelii ACA-1]
gi|123047064|sp|Q0SP51|RS18_BORAP RecName: Full=30S ribosomal protein S18
gi|110890209|gb|ABH01377.1| ribosomal protein S18 [Borrelia afzelii PKo]
gi|215979862|gb|EEC20684.1| ribosomal protein S18 [Borrelia afzelii ACA-1]
Length = 96
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RKSC G DYK+ L +F++++GKI+P RI+ S K QR LA IKRARY+
Sbjct: 31 KRKSCKFCDSGK-HPDYKEFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRARYMA 89
Query: 77 LIAYV 81
L+ +V
Sbjct: 90 LLPFV 94
>gi|325298154|ref|YP_004258071.1| 30S ribosomal protein S18 [Bacteroides salanitronis DSM 18170]
gi|324317707|gb|ADY35598.1| 30S ribosomal protein S18 [Bacteroides salanitronis DSM 18170]
Length = 89
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 85
>gi|153808732|ref|ZP_01961400.1| hypothetical protein BACCAC_03031 [Bacteroides caccae ATCC 43185]
gi|255691414|ref|ZP_05415089.1| ribosomal protein S18 [Bacteroides finegoldii DSM 17565]
gi|293368836|ref|ZP_06615440.1| ribosomal protein S18 [Bacteroides ovatus SD CMC 3f]
gi|298483612|ref|ZP_07001787.1| ribosomal protein S18 [Bacteroides sp. D22]
gi|149128558|gb|EDM19776.1| hypothetical protein BACCAC_03031 [Bacteroides caccae ATCC 43185]
gi|260623060|gb|EEX45931.1| ribosomal protein S18 [Bacteroides finegoldii DSM 17565]
gi|292636141|gb|EFF54629.1| ribosomal protein S18 [Bacteroides ovatus SD CMC 3f]
gi|298270182|gb|EFI11768.1| ribosomal protein S18 [Bacteroides sp. D22]
Length = 90
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|325679786|ref|ZP_08159360.1| ribosomal protein S18 [Ruminococcus albus 8]
gi|324108601|gb|EGC02843.1| ribosomal protein S18 [Ruminococcus albus 8]
Length = 83
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C A +IDYKDI L + +++R KI+P R++ QREL KAIKRAR++
Sbjct: 17 RKKVCMFCVDRAEKIDYKDIAKLRKCMTERAKILPRRVTGTCAYHQRELTKAIKRARHVA 76
Query: 77 LIAYV 81
L+ YV
Sbjct: 77 LLPYV 81
>gi|312144682|ref|YP_003996128.1| ribosomal protein S18 [Halanaerobium sp. 'sapolanicus']
gi|311905333|gb|ADQ15774.1| ribosomal protein S18 [Halanaerobium sp. 'sapolanicus']
Length = 70
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R KSC G IDYKD+R L R+L+ RGKI+P R + K QR++ A+KRAR +
Sbjct: 5 RNKSCHFCGSDKT-IDYKDLRTLKRYLTDRGKIMPRRTTGNCSKHQRDITIAVKRARAIA 63
Query: 77 LIAYV 81
L+ YV
Sbjct: 64 LLPYV 68
>gi|261855980|ref|YP_003263263.1| ribosomal protein S18 [Halothiobacillus neapolitanus c2]
gi|261836449|gb|ACX96216.1| ribosomal protein S18 [Halothiobacillus neapolitanus c2]
Length = 74
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + +IDYKD+ L ++L++ GKIVP+R++ + + QR+L AIKRAR+L L+ Y +
Sbjct: 14 TAENVKQIDYKDLDTLKQYLTETGKIVPARVTGTAARYQRQLQTAIKRARFLALLPYTD 72
>gi|213966078|ref|ZP_03394266.1| ribosomal protein S18 [Corynebacterium amycolatum SK46]
gi|213951276|gb|EEB62670.1| ribosomal protein S18 [Corynebacterium amycolatum SK46]
Length = 83
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI LL +F+S RGKI R++ ++ ++QR++A A+K AR
Sbjct: 15 SRRPKKNPLKAAGVEKVDYKDINLLRQFISDRGKIRSRRVTGLTPQQQRQVATAVKNARE 74
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 75 MALLPFT 81
>gi|225386697|ref|ZP_03756461.1| hypothetical protein CLOSTASPAR_00445 [Clostridium asparagiforme
DSM 15981]
gi|225047224|gb|EEG57470.1| hypothetical protein CLOSTASPAR_00445 [Clostridium asparagiforme
DSM 15981]
Length = 89
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L
Sbjct: 24 KKVCVFCGDKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIAL 83
Query: 78 IAYV 81
+ Y
Sbjct: 84 MPYT 87
>gi|218264329|ref|ZP_03478186.1| hypothetical protein PRABACTJOHN_03877 [Parabacteroides johnsonii
DSM 18315]
gi|218222097|gb|EEC94747.1| hypothetical protein PRABACTJOHN_03877 [Parabacteroides johnsonii
DSM 18315]
Length = 89
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 85
>gi|221633229|ref|YP_002522454.1| 30S ribosomal protein S18 [Thermomicrobium roseum DSM 5159]
gi|221155713|gb|ACM04840.1| 30S ribosomal protein S18 [Thermomicrobium roseum DSM 5159]
Length = 106
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G +IDYKD L R+LS + KI P R + K QR+LA+AIKRAR+L
Sbjct: 39 RKKVCSFCMDGIKKIDYKDFGRLRRYLSPQAKIEPRRATGTCAKHQRQLARAIKRARHLA 98
Query: 77 LIAYV 81
L+ +V
Sbjct: 99 LLPFV 103
>gi|153810611|ref|ZP_01963279.1| hypothetical protein RUMOBE_00992 [Ruminococcus obeum ATCC 29174]
gi|149833790|gb|EDM88871.1| hypothetical protein RUMOBE_00992 [Ruminococcus obeum ATCC 29174]
Length = 87
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L A+KRAR+L ++ Y
Sbjct: 25 CVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRALTVAVKRARHLSMMPY 84
Query: 81 V 81
V
Sbjct: 85 V 85
>gi|113170433|ref|YP_717225.1| Rps18 [Ostreococcus tauri]
gi|122228947|sp|Q0P3N0|RR18_OSTTA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112806840|emb|CAL36347.1| Rps18 [Ostreococcus tauri]
Length = 70
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+++ P+ I YK++ LL RF++++GKI+P R++ V+ K+QR+LAKAIK+AR LG
Sbjct: 5 RQRTSPIHA--GEIISYKNVDLLRRFITEQGKILPRRLTGVTAKEQRQLAKAIKQARILG 62
Query: 77 LIAYV 81
+ ++
Sbjct: 63 FLQFL 67
>gi|310830125|ref|YP_003962482.1| hypothetical protein ELI_4585 [Eubacterium limosum KIST612]
gi|308741859|gb|ADO39519.1| hypothetical protein ELI_4585 [Eubacterium limosum KIST612]
Length = 75
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P RR RK C + +DYKD+ L +++S+RGKI+P R + K QR++
Sbjct: 2 PKPFKRR-----RKVCEFCERHETEVDYKDVATLKKYISERGKILPRRATGTCAKHQRKV 56
Query: 66 AKAIKRARYLGLIAYVN 82
+A+KRAR + L+ Y +
Sbjct: 57 TEAVKRARNIALLPYTS 73
>gi|317057125|ref|YP_004105592.1| 30S ribosomal protein S18 [Ruminococcus albus 7]
gi|315449394|gb|ADU22958.1| ribosomal protein S18 [Ruminococcus albus 7]
Length = 81
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C A +IDYKDI L + +++R KI+P R++ QREL KAIKRAR++
Sbjct: 15 RKKVCMFCVDRAEKIDYKDIAKLRKCMTERAKILPRRVTGTCAYHQRELTKAIKRARHVA 74
Query: 77 LIAYV 81
L+ YV
Sbjct: 75 LLPYV 79
>gi|197119136|ref|YP_002139563.1| 30S ribosomal protein S18 [Geobacter bemidjiensis Bem]
gi|253700102|ref|YP_003021291.1| 30S ribosomal protein S18 [Geobacter sp. M21]
gi|226735120|sp|B5EHW8|RS18_GEOBB RecName: Full=30S ribosomal protein S18
gi|259494810|sp|C6E504|RS18_GEOSM RecName: Full=30S ribosomal protein S18
gi|197088496|gb|ACH39767.1| ribosomal protein S18 [Geobacter bemidjiensis Bem]
gi|251774952|gb|ACT17533.1| ribosomal protein S18 [Geobacter sp. M21]
Length = 92
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIKRAR +
Sbjct: 21 QRRKVCRFCADKQVTIDYKDPRTLRYFVSERGKIIPRRISGNCSKHQREITEAIKRARNI 80
Query: 76 GLI 78
L+
Sbjct: 81 ALL 83
>gi|282600706|ref|ZP_05979550.2| 30S ribosomal protein S18 [Subdoligranulum variabile DSM 15176]
gi|282571488|gb|EFB77023.1| 30S ribosomal protein S18 [Subdoligranulum variabile DSM 15176]
Length = 100
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QREL AIKRARY+
Sbjct: 34 RKKVCSFCVDRVEHIDYKDLPRLRKYVSERAKIIPRRVTGTCAFHQRELTVAIKRARYMA 93
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 94 LMPYVS 99
>gi|154508266|ref|ZP_02043908.1| hypothetical protein ACTODO_00762 [Actinomyces odontolyticus ATCC
17982]
gi|293191178|ref|ZP_06609111.1| ribosomal protein S18 [Actinomyces odontolyticus F0309]
gi|153797900|gb|EDN80320.1| hypothetical protein ACTODO_00762 [Actinomyces odontolyticus ATCC
17982]
gi|292820599|gb|EFF79568.1| ribosomal protein S18 [Actinomyces odontolyticus F0309]
Length = 80
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIEKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 67 AREMALLPY 75
>gi|171463205|ref|YP_001797318.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229560050|sp|B1XTM7|RS18_POLNS RecName: Full=30S ribosomal protein S18
gi|171192743|gb|ACB43704.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 84
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A PL +R ++ C + G +IDYKD+ L F+ + KI P+R++ K QR+
Sbjct: 8 AQNPLFKR-----KRYCRFTVAGVEQIDYKDVDTLKGFIGENAKITPARLTGTKAKYQRQ 62
Query: 65 LAKAIKRARYLGLIAYVN 82
L AIKRARYL L+ + +
Sbjct: 63 LDTAIKRARYLALLPFSD 80
>gi|290968075|ref|ZP_06559624.1| ribosomal protein S18 [Megasphaera genomosp. type_1 str. 28L]
gi|290781981|gb|EFD94560.1| ribosomal protein S18 [Megasphaera genomosp. type_1 str. 28L]
Length = 76
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C IDYKD L RF ++RGKI+P RIS V K QR+L AIKRAR +
Sbjct: 10 RRKVCNFCVDHVDLIDYKDTAKLRRFTTERGKILPRRISGVCAKHQRKLTIAIKRARAIA 69
Query: 77 LIAYV 81
L+ Y
Sbjct: 70 LLPYT 74
>gi|332983146|ref|YP_004464587.1| 30S ribosomal protein S18P [Mahella australiensis 50-1 BON]
gi|332700824|gb|AEE97765.1| SSU ribosomal protein S18P [Mahella australiensis 50-1 BON]
Length = 85
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C A +IDYKDI L +++++RGKI+P RI+ K QR+L AIKRAR + L
Sbjct: 20 KKVCAFCADKAYQIDYKDINRLKKYVTERGKIIPRRITGNCAKHQRQLTIAIKRARAIAL 79
Query: 78 IAYVN 82
+ Y
Sbjct: 80 LPYTT 84
>gi|134095345|ref|YP_001100420.1| 30S ribosomal protein S18 [Herminiimonas arsenicoxydans]
gi|133739248|emb|CAL62297.1| 30S ribosomal protein S18 [Herminiimonas arsenicoxydans]
Length = 94
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + ++DYKD+ L F+ + GKI+P+R++ QR++ AIKRAR+L
Sbjct: 25 RKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAIYQRQVDTAIKRARFLA 84
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 85 LLPYTDL 91
>gi|21221852|ref|NP_627631.1| 30S ribosomal protein S18 [Streptomyces coelicolor A3(2)]
gi|256786968|ref|ZP_05525399.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|7388047|sp|Q9X8K4|RS182_STRCO RecName: Full=30S ribosomal protein S18 2
gi|4808364|emb|CAB42778.1| putative 30S ribosomal protein S18 [Streptomyces coelicolor
A3(2)]
Length = 79
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ PL G +DYKD LL +F+S RGKI R++ V+ ++QR+LA+AIK AR +
Sbjct: 13 RQRPNPLDRDGVTYVDYKDTELLRKFVSDRGKIRSRRVTRVTSQQQRQLARAIKNAREMA 72
Query: 77 LIAY 80
L+ Y
Sbjct: 73 LLPY 76
>gi|295835236|ref|ZP_06822169.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|197698172|gb|EDY45105.1| ribosomal protein S18 [Streptomyces sp. SPB74]
Length = 79
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G IDYKD LL +FLS RGKI R++ VS ++QR+LA AIK AR + L+ Y
Sbjct: 18 PLDAAGITYIDYKDTDLLRKFLSDRGKIRSRRVTRVSAQQQRQLATAIKNAREMALLPY 76
>gi|283768493|ref|ZP_06341405.1| ribosomal protein S18 [Bulleidia extructa W1219]
gi|283104885|gb|EFC06257.1| ribosomal protein S18 [Bulleidia extructa W1219]
Length = 76
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ RRK C + IDYKD+ LL +F+S KI P R++ K QR LA AI
Sbjct: 3 FRKQRMGRRKVCYFTKNNIKFIDYKDVELLKKFISPNAKITPRRVTGTRAKYQRPLAIAI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYV 74
>gi|320095140|ref|ZP_08026848.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977922|gb|EFW09557.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 80
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIEKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 67 AREMALLPY 75
>gi|150019892|ref|YP_001312146.1| 30S ribosomal protein S18 [Clostridium beijerinckii NCIMB 8052]
gi|189029672|sp|A6M3L0|RS18_CLOB8 RecName: Full=30S ribosomal protein S18
gi|149906357|gb|ABR37190.1| ribosomal protein S18 [Clostridium beijerinckii NCIMB 8052]
Length = 86
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +RR+ R+K C A IDYKDI L +++++RGKI+P RIS K QREL
Sbjct: 12 PGGKMRRS---RKKVCAFCVDKAEFIDYKDINKLRKYVTERGKILPRRISGTCAKHQREL 68
Query: 66 AKAIKRARYLGLIAYVN 82
+IKRAR + L+ +
Sbjct: 69 TSSIKRARNIALLPFTT 85
>gi|146305681|ref|YP_001186146.1| 30S ribosomal protein S18 [Pseudomonas mendocina ymp]
gi|330501635|ref|YP_004378504.1| 30S ribosomal protein S18 [Pseudomonas mendocina NK-01]
gi|166220976|sp|A4XPZ8|RS18_PSEMY RecName: Full=30S ribosomal protein S18
gi|145573882|gb|ABP83414.1| SSU ribosomal protein S18P [Pseudomonas mendocina ymp]
gi|328915921|gb|AEB56752.1| 30S ribosomal protein S18 [Pseudomonas mendocina NK-01]
Length = 76
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEDVKEIDFKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTD 72
>gi|300777789|ref|ZP_07087647.1| 30S ribosomal protein S18 [Chryseobacterium gleum ATCC 35910]
gi|300503299|gb|EFK34439.1| 30S ribosomal protein S18 [Chryseobacterium gleum ATCC 35910]
Length = 100
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL N +K C G +DYKD L +F++++GKI+P R + S K QR+++
Sbjct: 22 TPL-DINTKSEKKYCRFKKYGIKHVDYKDADFLLQFVNEQGKILPRRYTGTSLKYQRKVS 80
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR+L L+ YV
Sbjct: 81 AAIKRARHLALLPYV 95
>gi|160890914|ref|ZP_02071917.1| hypothetical protein BACUNI_03359 [Bacteroides uniformis ATCC
8492]
gi|167764865|ref|ZP_02436986.1| hypothetical protein BACSTE_03257 [Bacteroides stercoris ATCC
43183]
gi|218128603|ref|ZP_03457407.1| hypothetical protein BACEGG_00173 [Bacteroides eggerthii DSM
20697]
gi|270295895|ref|ZP_06202095.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317475593|ref|ZP_07934855.1| ribosomal protein S18 [Bacteroides eggerthii 1_2_48FAA]
gi|317479666|ref|ZP_07938790.1| ribosomal protein S18 [Bacteroides sp. 4_1_36]
gi|319899907|ref|YP_004159635.1| SSU ribosomal protein S18P [Bacteroides helcogenes P 36-108]
gi|329957654|ref|ZP_08298129.1| ribosomal protein S18 [Bacteroides clarus YIT 12056]
gi|329960227|ref|ZP_08298669.1| ribosomal protein S18 [Bacteroides fluxus YIT 12057]
gi|156859913|gb|EDO53344.1| hypothetical protein BACUNI_03359 [Bacteroides uniformis ATCC
8492]
gi|167697534|gb|EDS14113.1| hypothetical protein BACSTE_03257 [Bacteroides stercoris ATCC
43183]
gi|217989205|gb|EEC55519.1| hypothetical protein BACEGG_00173 [Bacteroides eggerthii DSM
20697]
gi|270273299|gb|EFA19161.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904167|gb|EFV25997.1| ribosomal protein S18 [Bacteroides sp. 4_1_36]
gi|316908297|gb|EFV29989.1| ribosomal protein S18 [Bacteroides eggerthii 1_2_48FAA]
gi|319414938|gb|ADV42049.1| SSU ribosomal protein S18P [Bacteroides helcogenes P 36-108]
gi|328522531|gb|EGF49640.1| ribosomal protein S18 [Bacteroides clarus YIT 12056]
gi|328532900|gb|EGF59677.1| ribosomal protein S18 [Bacteroides fluxus YIT 12057]
Length = 90
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|189463978|ref|ZP_03012763.1| hypothetical protein BACINT_00313 [Bacteroides intestinalis DSM
17393]
gi|224536025|ref|ZP_03676564.1| hypothetical protein BACCELL_00889 [Bacteroides cellulosilyticus
DSM 14838]
gi|189438551|gb|EDV07536.1| hypothetical protein BACINT_00313 [Bacteroides intestinalis DSM
17393]
gi|224522350|gb|EEF91455.1| hypothetical protein BACCELL_00889 [Bacteroides cellulosilyticus
DSM 14838]
Length = 89
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 85
>gi|150010521|ref|YP_001305264.1| 30S ribosomal protein S18 [Parabacteroides distasonis ATCC 8503]
gi|154491708|ref|ZP_02031334.1| hypothetical protein PARMER_01319 [Parabacteroides merdae ATCC
43184]
gi|255016568|ref|ZP_05288694.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_7]
gi|256842194|ref|ZP_05547698.1| ribosomal protein S18 [Parabacteroides sp. D13]
gi|262384879|ref|ZP_06078011.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_33B]
gi|298377641|ref|ZP_06987592.1| ribosomal protein S18 [Bacteroides sp. 3_1_19]
gi|301308939|ref|ZP_07214884.1| ribosomal protein S18 [Bacteroides sp. 20_3]
gi|205616305|sp|A6LIX8|RS18_PARD8 RecName: Full=30S ribosomal protein S18
gi|149938945|gb|ABR45642.1| 30S ribosomal protein S18 [Parabacteroides distasonis ATCC 8503]
gi|154087949|gb|EDN86994.1| hypothetical protein PARMER_01319 [Parabacteroides merdae ATCC
43184]
gi|256736078|gb|EEU49408.1| ribosomal protein S18 [Parabacteroides sp. D13]
gi|262293595|gb|EEY81531.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_33B]
gi|298265344|gb|EFI07006.1| ribosomal protein S18 [Bacteroides sp. 3_1_19]
gi|300832965|gb|EFK63590.1| ribosomal protein S18 [Bacteroides sp. 20_3]
Length = 89
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 85
>gi|333029249|ref|ZP_08457310.1| 30S ribosomal protein S18 [Bacteroides coprosuis DSM 18011]
gi|332739846|gb|EGJ70328.1| 30S ribosomal protein S18 [Bacteroides coprosuis DSM 18011]
Length = 90
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|332665254|ref|YP_004448042.1| 30S ribosomal protein S18 [Haliscomenobacter hydrossis DSM 1100]
gi|332334068|gb|AEE51169.1| 30S ribosomal protein S18 [Haliscomenobacter hydrossis DSM 1100]
Length = 88
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++++GKI+P RI+ S K QR++A A+KRAR+
Sbjct: 17 QNRKKYCRFRKFGIKYIDYKDGDFLLQFINEQGKILPRRITGNSLKYQRKVATAVKRARH 76
Query: 75 LGLIAYV 81
L L+ YV
Sbjct: 77 LALLPYV 83
>gi|167747438|ref|ZP_02419565.1| hypothetical protein ANACAC_02158 [Anaerostipes caccae DSM 14662]
gi|317471167|ref|ZP_07930538.1| ribosomal protein S18 [Anaerostipes sp. 3_2_56FAA]
gi|167652800|gb|EDR96929.1| hypothetical protein ANACAC_02158 [Anaerostipes caccae DSM 14662]
gi|316901382|gb|EFV23325.1| ribosomal protein S18 [Anaerostipes sp. 3_2_56FAA]
Length = 84
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + IDYKD+ L +++S+RGKI+P RI+ K QR + AIKRAR+L L+
Sbjct: 20 KVCAFCTEADAVIDYKDVATLKKYVSERGKILPRRITGTCAKHQRAVTSAIKRARHLALM 79
Query: 79 AYVN 82
Y
Sbjct: 80 PYTQ 83
>gi|304438788|ref|ZP_07398715.1| 30S ribosomal protein S18 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372711|gb|EFM26290.1| 30S ribosomal protein S18 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 74
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R RRK C IDYKD + L RF+S++GKI+P R++ K QRE+ AI
Sbjct: 1 MQRRFRSRRKVCAFCQDPNKVIDYKDSQSLRRFISEKGKILPRRVTGSCAKHQREVTSAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQIALLPY 71
>gi|94263201|ref|ZP_01287018.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|94270367|ref|ZP_01291725.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|93450833|gb|EAT01866.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|93456419|gb|EAT06539.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
Length = 78
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ RRK C + IDYKDI+ L FL++RGKI+P RI + QR+L +A
Sbjct: 1 MQRKKFFGRRKVCRFCADKSLVIDYKDIKNLRGFLTERGKIIPRRIYGNCARHQRQLCEA 60
Query: 69 IKRARYLGLIAY 80
IKRAR + L+ Y
Sbjct: 61 IKRARQIALLPY 72
>gi|170016529|ref|YP_001727448.1| ribosomal protein S18 [Leuconostoc citreum KM20]
gi|326693086|ref|ZP_08230091.1| 30S ribosomal protein S18 [Leuconostoc argentinum KCTC 3773]
gi|229560045|sp|B1MWV2|RS18_LEUCK RecName: Full=30S ribosomal protein S18
gi|169803386|gb|ACA82004.1| Ribosomal protein S18 [Leuconostoc citreum KM20]
Length = 94
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+ +V
Sbjct: 41 IDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMALLPFV 91
>gi|116619041|ref|YP_819412.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122270759|sp|Q03UT3|RS18_LEUMM RecName: Full=30S ribosomal protein S18
gi|116097888|gb|ABJ63039.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 94
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+ +V
Sbjct: 41 IDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMALLPFV 91
>gi|222054669|ref|YP_002537031.1| ribosomal protein S18 [Geobacter sp. FRC-32]
gi|254812941|sp|B9M5U9|RS18_GEOSF RecName: Full=30S ribosomal protein S18
gi|221563958|gb|ACM19930.1| ribosomal protein S18 [Geobacter sp. FRC-32]
Length = 91
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIKRAR +
Sbjct: 20 QRRKVCRFCADKQVTIDYKDPRTLRYFISERGKIIPRRISGNCAKHQREITEAIKRARNI 79
Query: 76 GLI 78
L+
Sbjct: 80 ALL 82
>gi|254798679|ref|YP_003058300.1| ribosomal protein S18 [Parachlorella kessleri]
gi|229915627|gb|ACQ90970.1| ribosomal protein S18 [Parachlorella kessleri]
Length = 105
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 28 APR--IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
APR +DYK+ +LL +F+S +GKI+P R + ++ K+QR +A AIKRAR GL+ +VNL
Sbjct: 40 APRYLMDYKNTKLLVKFISPQGKILPRRATGLTAKQQRSMANAIKRARMSGLLPFVNL 97
>gi|118587178|ref|ZP_01544606.1| ribosomal protein S18 [Oenococcus oeni ATCC BAA-1163]
gi|118432320|gb|EAV39058.1| ribosomal protein S18 [Oenococcus oeni ATCC BAA-1163]
Length = 106
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD LL RF++ GKI+P RI+ S K QR++A AIKRAR + L+ +V
Sbjct: 53 VDYKDTELLQRFIADNGKILPRRITGTSSKNQRKIATAIKRARIMALLPFV 103
>gi|313664921|ref|YP_004046792.1| ribosomal protein S18 [Mycoplasma leachii PG50]
gi|312949974|gb|ADR24570.1| ribosomal protein S18 [Mycoplasma leachii PG50]
Length = 75
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+ YV
Sbjct: 23 IDYKDVELLKKFISPNGQILPRRITGTSPKDQRQLALAIKRARQMALLPYV 73
>gi|332830347|gb|EGK02975.1| 30S ribosomal protein S18 [Dysgonomonas gadei ATCC BAA-286]
gi|332883573|gb|EGK03856.1| 30S ribosomal protein S18 [Dysgonomonas mossii DSM 22836]
Length = 88
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 29 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 84
>gi|322420134|ref|YP_004199357.1| 30S ribosomal protein S18 [Geobacter sp. M18]
gi|320126521|gb|ADW14081.1| ribosomal protein S18 [Geobacter sp. M18]
Length = 93
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIKRAR +
Sbjct: 22 QRRKVCRFCADKQVSIDYKDPRTLRYFVSERGKIIPRRISGNCSKHQREITEAIKRARNI 81
Query: 76 GLI 78
L+
Sbjct: 82 ALL 84
>gi|121605292|ref|YP_982621.1| 30S ribosomal protein S18 [Polaromonas naphthalenivorans CJ2]
gi|166220969|sp|A1VPX2|RS18_POLNA RecName: Full=30S ribosomal protein S18
gi|120594261|gb|ABM37700.1| SSU ribosomal protein S18P [Polaromonas naphthalenivorans CJ2]
Length = 94
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+S+ GKI+P+R++ QR++ A+KRAR+L
Sbjct: 24 RKRFCRFTAAGVEEIDYKDIDTLRDFVSENGKIIPARLTGTRAIFQRQINTAVKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MLPYSD 89
>gi|315605480|ref|ZP_07880518.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312826|gb|EFU60905.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 80
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIDKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 67 AREMALLPY 75
>gi|26991556|ref|NP_746981.1| 30S ribosomal protein S18 [Pseudomonas putida KT2440]
gi|104783859|ref|YP_610357.1| 30S ribosomal protein S18 [Pseudomonas entomophila L48]
gi|148549959|ref|YP_001270061.1| 30S ribosomal protein S18 [Pseudomonas putida F1]
gi|167035922|ref|YP_001671153.1| 30S ribosomal protein S18 [Pseudomonas putida GB-1]
gi|170723828|ref|YP_001751516.1| 30S ribosomal protein S18 [Pseudomonas putida W619]
gi|325271216|ref|ZP_08137761.1| 30S ribosomal protein S18 [Pseudomonas sp. TJI-51]
gi|38258490|sp|Q88DE9|RS18_PSEPK RecName: Full=30S ribosomal protein S18
gi|122985731|sp|Q1I462|RS18_PSEE4 RecName: Full=30S ribosomal protein S18
gi|166220977|sp|A5W9R7|RS18_PSEP1 RecName: Full=30S ribosomal protein S18
gi|189029684|sp|B0KKY2|RS18_PSEPG RecName: Full=30S ribosomal protein S18
gi|229560054|sp|B1JAH0|RS18_PSEPW RecName: Full=30S ribosomal protein S18
gi|24986641|gb|AAN70445.1|AE016685_10 ribosomal protein S18 [Pseudomonas putida KT2440]
gi|95112846|emb|CAK17574.1| 30S ribosomal protein S18 [Pseudomonas entomophila L48]
gi|148514017|gb|ABQ80877.1| SSU ribosomal protein S18P [Pseudomonas putida F1]
gi|166862410|gb|ABZ00818.1| ribosomal protein S18 [Pseudomonas putida GB-1]
gi|169761831|gb|ACA75147.1| ribosomal protein S18 [Pseudomonas putida W619]
gi|313500860|gb|ADR62226.1| RpsR [Pseudomonas putida BIRD-1]
gi|324103619|gb|EGC00921.1| 30S ribosomal protein S18 [Pseudomonas sp. TJI-51]
Length = 76
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEDVKEIDFKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTD 72
>gi|302870697|ref|YP_003839334.1| 30S ribosomal protein S18 [Micromonospora aurantiaca ATCC 27029]
gi|315506934|ref|YP_004085821.1| ribosomal protein s18 [Micromonospora sp. L5]
gi|302573556|gb|ADL49758.1| ribosomal protein S18 [Micromonospora aurantiaca ATCC 27029]
gi|315413553|gb|ADU11670.1| ribosomal protein S18 [Micromonospora sp. L5]
Length = 79
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR +
Sbjct: 11 KKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYT 75
>gi|257065460|ref|YP_003145132.1| SSU ribosomal protein S18P [Slackia heliotrinireducens DSM 20476]
gi|256793113|gb|ACV23783.1| SSU ribosomal protein S18P [Slackia heliotrinireducens DSM 20476]
Length = 86
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAE + P RRK C +DYKD LL ++++ RGKI P R++ +
Sbjct: 1 MAEYSKQP--------RRKYCQFCKDDTEYVDYKDTALLRKYMTDRGKIKPRRVTGACVQ 52
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR++A AIK AR +GL+ Y
Sbjct: 53 HQRDVANAIKNAREMGLMPYT 73
>gi|225571308|ref|ZP_03780304.1| hypothetical protein CLOHYLEM_07406 [Clostridium hylemonae DSM
15053]
gi|225159784|gb|EEG72403.1| hypothetical protein CLOHYLEM_07406 [Clostridium hylemonae DSM
15053]
Length = 88
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++ ++ Y
Sbjct: 26 CVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHIAIMPY 85
Query: 81 V 81
V
Sbjct: 86 V 86
>gi|121595517|ref|YP_987413.1| 30S ribosomal protein S18 [Acidovorax sp. JS42]
gi|222111738|ref|YP_002554002.1| 30S ribosomal protein s18 [Acidovorax ebreus TPSY]
gi|166220919|sp|A1WAR2|RS18_ACISJ RecName: Full=30S ribosomal protein S18
gi|254765424|sp|B9MDJ3|RS18_DIAST RecName: Full=30S ribosomal protein S18
gi|120607597|gb|ABM43337.1| SSU ribosomal protein S18P [Acidovorax sp. JS42]
gi|221731182|gb|ACM34002.1| ribosomal protein S18 [Acidovorax ebreus TPSY]
Length = 93
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 84 LLPYSD 89
>gi|153956490|ref|YP_001397255.1| 30S ribosomal protein S18 [Clostridium kluyveri DSM 555]
gi|219856793|ref|YP_002473915.1| hypothetical protein CKR_3450 [Clostridium kluyveri NBRC 12016]
gi|189029673|sp|A5N438|RS18_CLOK5 RecName: Full=30S ribosomal protein S18
gi|254765422|sp|B9DXQ8|RS18_CLOK1 RecName: Full=30S ribosomal protein S18
gi|146349348|gb|EDK35884.1| RpsR [Clostridium kluyveri DSM 555]
gi|219570517|dbj|BAH08501.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 84
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + IDYKDI L +++++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 18 KRKVCAFCMDKSEFIDYKDINKLRKYVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 77
Query: 77 LIAYV 81
L+ +
Sbjct: 78 LLPFT 82
>gi|221068653|ref|ZP_03544758.1| ribosomal protein S18 [Comamonas testosteroni KF-1]
gi|264677151|ref|YP_003277057.1| ribosomal protein S18 [Comamonas testosteroni CNB-2]
gi|299530695|ref|ZP_07044110.1| 30S ribosomal protein S18 [Comamonas testosteroni S44]
gi|220713676|gb|EED69044.1| ribosomal protein S18 [Comamonas testosteroni KF-1]
gi|262207663|gb|ACY31761.1| ribosomal protein S18 [Comamonas testosteroni CNB-2]
gi|298721211|gb|EFI62153.1| 30S ribosomal protein S18 [Comamonas testosteroni S44]
Length = 93
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKIVP+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIVPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MLPYSD 89
>gi|116490138|ref|YP_809667.1| SSU ribosomal protein S18P [Oenococcus oeni PSU-1]
gi|290889532|ref|ZP_06552622.1| hypothetical protein AWRIB429_0012 [Oenococcus oeni AWRIB429]
gi|122277671|sp|Q04HQ5|RS18_OENOB RecName: Full=30S ribosomal protein S18
gi|116090863|gb|ABJ56017.1| SSU ribosomal protein S18P [Oenococcus oeni PSU-1]
gi|290480730|gb|EFD89364.1| hypothetical protein AWRIB429_0012 [Oenococcus oeni AWRIB429]
Length = 106
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD LL RF++ GKI+P RI+ S K QR++A AIKRAR + L+ +V
Sbjct: 53 VDYKDTELLQRFIADNGKILPRRITGTSSKNQRKIATAIKRARIMALLPFV 103
>gi|302877153|ref|YP_003845786.1| 30S ribosomal protein S18 [Clostridium cellulovorans 743B]
gi|307687852|ref|ZP_07630298.1| 30S ribosomal protein S18 [Clostridium cellulovorans 743B]
gi|302580010|gb|ADL54022.1| ribosomal protein S18 [Clostridium cellulovorans 743B]
Length = 85
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD+ L +++++RGKI+P RIS K QREL +IKRAR +
Sbjct: 19 RKKVCAFCSEKVEAIDYKDVNRLRKYVTERGKILPRRISGTCAKHQRELTGSIKRARNIA 78
Query: 77 LIAYV 81
L+ +
Sbjct: 79 LLPFT 83
>gi|313205958|ref|YP_004045135.1| SSU ribosomal protein s18p [Riemerella anatipestifer DSM 15868]
gi|312445274|gb|ADQ81629.1| SSU ribosomal protein S18P [Riemerella anatipestifer DSM 15868]
gi|315022271|gb|EFT35299.1| SSU ribosomal protein S18p [Riemerella anatipestifer RA-YM]
gi|325336603|gb|ADZ12877.1| Ribosomal protein S18 [Riemerella anatipestifer RA-GD]
Length = 100
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL N +K C G +DYKD L +F++++GKI+P R + S K QR+++
Sbjct: 22 TPL-DINTKSEKKYCRFKKYGIKYVDYKDADFLLQFVNEQGKILPRRYTGTSLKYQRKVS 80
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR+L L+ YV
Sbjct: 81 AAIKRARHLALMPYV 95
>gi|110746771|gb|ABG89277.1| ribosomal protein S18 [Paenibacillus larvae]
Length = 75
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKDI L +F+S+RGKI+P R++ S K QR L AIKRAR + L+ Y
Sbjct: 13 CYFTANKIKHIDYKDIDTLKKFISERGKILPRRVTGTSAKYQRMLTIAIKRARQVALLPY 72
Query: 81 VN 82
Sbjct: 73 TT 74
>gi|257070269|ref|YP_003156524.1| 30S ribosomal protein S18 [Brachybacterium faecium DSM 4810]
gi|256561087|gb|ACU86934.1| SSU ribosomal protein S18P [Brachybacterium faecium DSM 4810]
Length = 78
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+LR+ ++K PL G +DYKD LL +F+S RGKI R++ V+ ++QR++AK
Sbjct: 4 PVLRK---PKKKQNPLKAAGLETVDYKDAALLRKFISDRGKIRARRVTGVTVQEQRKIAK 60
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 61 AVKNAREIALLPY 73
>gi|212715366|ref|ZP_03323494.1| hypothetical protein BIFCAT_00260 [Bifidobacterium catenulatum
DSM 16992]
gi|225352542|ref|ZP_03743565.1| hypothetical protein BIFPSEUDO_04165 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212661672|gb|EEB22247.1| hypothetical protein BIFCAT_00260 [Bifidobacterium catenulatum
DSM 16992]
gi|225156736|gb|EEG70130.1| hypothetical protein BIFPSEUDO_04165 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 82
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ VS ++QRELAKAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVSVQEQRELAKAIKNAREMALLPYAT 79
>gi|139439449|ref|ZP_01772890.1| Hypothetical protein COLAER_01910 [Collinsella aerofaciens ATCC
25986]
gi|133775228|gb|EBA39048.1| Hypothetical protein COLAER_01910 [Collinsella aerofaciens ATCC
25986]
Length = 88
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 11 RRKYCQFCKENTEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYT 75
>gi|29347572|ref|NP_811075.1| 30S ribosomal protein S18 [Bacteroides thetaiotaomicron VPI-5482]
gi|253572032|ref|ZP_04849436.1| 30S ribosomal protein S18 [Bacteroides sp. 1_1_6]
gi|298383735|ref|ZP_06993296.1| ribosomal protein S18 [Bacteroides sp. 1_1_14]
gi|59798897|sp|Q8A5S6|RS18_BACTN RecName: Full=30S ribosomal protein S18
gi|29339473|gb|AAO77269.1| 30S ribosomal protein S18 [Bacteroides thetaiotaomicron VPI-5482]
gi|251838212|gb|EES66299.1| 30S ribosomal protein S18 [Bacteroides sp. 1_1_6]
gi|298263339|gb|EFI06202.1| ribosomal protein S18 [Bacteroides sp. 1_1_14]
Length = 90
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 35 IDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|226323516|ref|ZP_03799034.1| hypothetical protein COPCOM_01291 [Coprococcus comes ATCC 27758]
gi|225208200|gb|EEG90554.1| hypothetical protein COPCOM_01291 [Coprococcus comes ATCC 27758]
Length = 87
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD L +++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 25 CVFCGKENNEIDYKDTAKLKKYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 84
Query: 81 V 81
V
Sbjct: 85 V 85
>gi|159040547|ref|YP_001539800.1| 30S ribosomal protein S18 [Salinispora arenicola CNS-205]
gi|238061877|ref|ZP_04606586.1| 30S ribosomal protein S18 [Micromonospora sp. ATCC 39149]
gi|330470800|ref|YP_004408543.1| 30S ribosomal protein S18 [Verrucosispora maris AB-18-032]
gi|205617156|sp|A8LXG1|RS18_SALAI RecName: Full=30S ribosomal protein S18
gi|157919382|gb|ABW00810.1| ribosomal protein S18 [Salinispora arenicola CNS-205]
gi|237883688|gb|EEP72516.1| 30S ribosomal protein S18 [Micromonospora sp. ATCC 39149]
gi|328813771|gb|AEB47943.1| 30S ribosomal protein S18 [Verrucosispora maris AB-18-032]
Length = 79
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR +
Sbjct: 11 KKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYT 75
>gi|299135703|ref|ZP_07028887.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX8]
gi|298601827|gb|EFI57981.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX8]
Length = 124
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + + I Y+D+RLL +F+S RGKI+P R++ S QR+L KAIK+AR +
Sbjct: 57 RKKVCKFTVEKIDTISYRDVRLLQQFVSDRGKIIPRRLTGTSAPFQRKLTKAIKQARAIA 116
Query: 77 LIAYV 81
L+ Y
Sbjct: 117 LLPYA 121
>gi|83319872|ref|YP_424024.1| 30S ribosomal protein S18 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|123726538|sp|Q2ST89|RS18_MYCCT RecName: Full=30S ribosomal protein S18
gi|83283758|gb|ABC01690.1| 30S ribosomal protein S18 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 75
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+ YV
Sbjct: 23 IDYKDVELLKKFISPNGQILPRRITGTSLKDQRQLALAIKRARQMALLPYV 73
>gi|325279432|ref|YP_004251974.1| 30S ribosomal protein S18 [Odoribacter splanchnicus DSM 20712]
gi|324311241|gb|ADY31794.1| 30S ribosomal protein S18 [Odoribacter splanchnicus DSM 20712]
Length = 89
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKD L +FL+++GKI+P RI+ S K QR++A A+KRAR+L
Sbjct: 20 KKKYCRFRKARIKFIDYKDPEFLKKFLNEQGKILPRRITGTSVKFQRKVATAVKRARHLA 79
Query: 77 LIAYVN 82
L+ YV
Sbjct: 80 LLPYVT 85
>gi|148265697|ref|YP_001232403.1| 30S ribosomal protein S18 [Geobacter uraniireducens Rf4]
gi|189029678|sp|A5G7R2|RS18_GEOUR RecName: Full=30S ribosomal protein S18
gi|146399197|gb|ABQ27830.1| SSU ribosomal protein S18P [Geobacter uraniireducens Rf4]
Length = 91
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIKRAR +
Sbjct: 20 QRRKVCRFCADKQVSIDYKDPRTLRYFISERGKIIPRRISGNCAKHQREITEAIKRARNI 79
Query: 76 GLI 78
L+
Sbjct: 80 ALL 82
>gi|317506809|ref|ZP_07964583.1| ribosomal protein S18 [Segniliparus rugosus ATCC BAA-974]
gi|316254883|gb|EFV14179.1| ribosomal protein S18 [Segniliparus rugosus ATCC BAA-974]
Length = 83
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA P LR + K PL +G +DYKD LL F+S+RGKI R++ ++ +
Sbjct: 1 MARKPPVKKLRVAEIRKPKKNPLKAQGVEHVDYKDTNLLRTFISERGKIRSRRVTGLTPR 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + N
Sbjct: 61 QQRDVAVAVKNAREMALLPFTN 82
>gi|266620038|ref|ZP_06112973.1| ribosomal protein S18 [Clostridium hathewayi DSM 13479]
gi|288868399|gb|EFD00698.1| ribosomal protein S18 [Clostridium hathewayi DSM 13479]
Length = 88
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGEKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|164686462|ref|ZP_02210490.1| hypothetical protein CLOBAR_00027 [Clostridium bartlettii DSM
16795]
gi|164604473|gb|EDQ97938.1| hypothetical protein CLOBAR_00027 [Clostridium bartlettii DSM
16795]
Length = 75
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C RIDYK+ + L +++++RGKI+P RIS K QREL AIKRAR L L+ Y
Sbjct: 13 CQFCASKDARIDYKNTQRLQKYITERGKILPRRISGTCAKHQRELTVAIKRARNLALLPY 72
Query: 81 V 81
Sbjct: 73 T 73
>gi|50364897|ref|YP_053322.1| 30S ribosomal protein S18 [Mesoplasma florum L1]
gi|59798695|sp|Q6F235|RS18_MESFL RecName: Full=30S ribosomal protein S18
gi|50363453|gb|AAT75438.1| 30S ribosomal protein S18 [Mesoplasma florum L1]
Length = 76
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+ YV
Sbjct: 24 IDYKDVELLKKFISGNGQILPRRITGTSPKHQRQLAVAIKRARQMALLPYV 74
>gi|225850831|ref|YP_002731065.1| ribosomal protein S18 [Persephonella marina EX-H1]
gi|225646076|gb|ACO04262.1| ribosomal protein S18 [Persephonella marina EX-H1]
Length = 84
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+PT + R+K C +G +YKD L +F+S+RGKI+P RIS K QR+
Sbjct: 7 SPTAQNKPFFQKRKKYCKFCAEGK-EPNYKDTEYLKQFISERGKIIPRRISGTCGKHQRK 65
Query: 65 LAKAIKRARYLGLIAYV 81
L IKRAR L L+ YV
Sbjct: 66 LTVEIKRARQLALLPYV 82
>gi|160885186|ref|ZP_02066189.1| hypothetical protein BACOVA_03184 [Bacteroides ovatus ATCC 8483]
gi|237714853|ref|ZP_04545334.1| 30S ribosomal protein S18 [Bacteroides sp. D1]
gi|237719993|ref|ZP_04550474.1| 30S ribosomal protein S18 [Bacteroides sp. 2_2_4]
gi|260174162|ref|ZP_05760574.1| 30S ribosomal protein S18 [Bacteroides sp. D2]
gi|262406876|ref|ZP_06083425.1| ribosomal protein S18 [Bacteroides sp. 2_1_22]
gi|294647156|ref|ZP_06724755.1| ribosomal protein S18 [Bacteroides ovatus SD CC 2a]
gi|294809233|ref|ZP_06767949.1| ribosomal protein S18 [Bacteroides xylanisolvens SD CC 1b]
gi|299147873|ref|ZP_07040936.1| ribosomal protein S18 [Bacteroides sp. 3_1_23]
gi|315922427|ref|ZP_07918667.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109536|gb|EDO11281.1| hypothetical protein BACOVA_03184 [Bacteroides ovatus ATCC 8483]
gi|229445178|gb|EEO50969.1| 30S ribosomal protein S18 [Bacteroides sp. D1]
gi|229450545|gb|EEO56336.1| 30S ribosomal protein S18 [Bacteroides sp. 2_2_4]
gi|262355579|gb|EEZ04670.1| ribosomal protein S18 [Bacteroides sp. 2_1_22]
gi|292637443|gb|EFF55862.1| ribosomal protein S18 [Bacteroides ovatus SD CC 2a]
gi|294443627|gb|EFG12378.1| ribosomal protein S18 [Bacteroides xylanisolvens SD CC 1b]
gi|295084750|emb|CBK66273.1| SSU ribosomal protein S18P [Bacteroides xylanisolvens XB1A]
gi|298514056|gb|EFI37942.1| ribosomal protein S18 [Bacteroides sp. 3_1_23]
gi|313696302|gb|EFS33137.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 90
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 31 GIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|153855507|ref|ZP_01996626.1| hypothetical protein DORLON_02640 [Dorea longicatena DSM 13814]
gi|149752029|gb|EDM61960.1| hypothetical protein DORLON_02640 [Dorea longicatena DSM 13814]
Length = 88
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD L +++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGKENNEIDYKDTAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 85
Query: 81 V 81
V
Sbjct: 86 V 86
>gi|284047347|ref|YP_003397687.1| ribosomal protein S18 [Conexibacter woesei DSM 14684]
gi|283951568|gb|ADB54312.1| ribosomal protein S18 [Conexibacter woesei DSM 14684]
Length = 108
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RRK CP + ++D+KDI L +F+S+RGKI RI+ + Q ++++A+KRAR
Sbjct: 20 SSRRKPCPYCKEKVDQVDWKDIGSLRKFVSERGKIRSRRITGACRRHQNQVSRAVKRARE 79
Query: 75 LGLIAYV 81
L L+ YV
Sbjct: 80 LALLPYV 86
>gi|90994447|ref|YP_536937.1| ribosomal protein S18 [Porphyra yezoensis]
gi|122238242|sp|Q1XDN1|RR18_PORYE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|90819011|dbj|BAE92380.1| 30S ribosomal protein S18 [Porphyra yezoensis]
Length = 70
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R + P+ A +DYKDI LL +F++++GKI+P R + ++ K+Q++L KAIK+AR L
Sbjct: 4 YRNRISPIKPTDA--VDYKDIDLLRKFITEQGKILPKRSTGLTSKQQKKLTKAIKQARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFLN 68
>gi|296111019|ref|YP_003621400.1| 30S ribosomal protein S18 [Leuconostoc kimchii IMSNU 11154]
gi|295832550|gb|ADG40431.1| 30S ribosomal protein S18 [Leuconostoc kimchii IMSNU 11154]
Length = 94
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL RF+S+RGKI+P R++ S K QR++ A+KRAR + L+ +V
Sbjct: 41 IDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAVKRARIMALLPFV 91
>gi|226968550|ref|YP_002808503.1| small subunit ribosomal protein S18 [Micromonas pusilla CCMP1545]
gi|226348845|gb|ACO50748.1| small subunit ribosomal protein S18 [Micromonas pusilla CCMP1545]
Length = 70
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N+S +R S G+ I+YK++ LL RF++++GKI+P R++ V+ K+QR+LA+A+K+A
Sbjct: 2 NLSRQRTSPINEGEI---INYKNVDLLRRFITEQGKILPRRLTGVTAKQQRQLARAVKQA 58
Query: 73 RYLGLIAYV 81
R LG + ++
Sbjct: 59 RILGFLQFL 67
>gi|229816198|ref|ZP_04446508.1| hypothetical protein COLINT_03245 [Collinsella intestinalis DSM
13280]
gi|229808206|gb|EEP43998.1| hypothetical protein COLINT_03245 [Collinsella intestinalis DSM
13280]
Length = 88
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 11 RRKYCQFCKENTEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAREMA 70
Query: 77 LIAYV 81
L+ Y
Sbjct: 71 LLPYA 75
>gi|39995772|ref|NP_951723.1| 30S ribosomal protein S18 [Geobacter sulfurreducens PCA]
gi|59798802|sp|Q74FE3|RS18_GEOSL RecName: Full=30S ribosomal protein S18
gi|39982536|gb|AAR33996.1| ribosomal protein S18 [Geobacter sulfurreducens PCA]
gi|307634729|gb|ADI83505.2| ribosomal protein S18 [Geobacter sulfurreducens KN400]
Length = 103
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKD R+L F+++RGKIVP RIS QRE+ +AIKRAR +
Sbjct: 32 QRRKVCRFCADKTLVIDYKDPRVLRSFITERGKIVPRRISGNCSAHQREITEAIKRARNI 91
Query: 76 GLI 78
LI
Sbjct: 92 ALI 94
>gi|237745856|ref|ZP_04576336.1| 30S ribosomal protein S18 [Oxalobacter formigenes HOxBLS]
gi|229377207|gb|EEO27298.1| 30S ribosomal protein S18 [Oxalobacter formigenes HOxBLS]
Length = 94
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + +IDYKDI L F+ + KI+P+R++ QR+L AIKRAR+L
Sbjct: 25 RKKFCRFTVANVEQIDYKDIDTLKDFIQENCKIMPARLTGTKAHYQRQLDTAIKRARFLA 84
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 85 LLPYTSL 91
>gi|188997592|ref|YP_001931843.1| ribosomal protein S18 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932659|gb|ACD67289.1| ribosomal protein S18 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 79
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSG-KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C K P +YKDI L F+S+RGKI PSRIS K QR+L+ IK+AR L
Sbjct: 14 RKKYCKFCAEKKEP--NYKDIETLKEFISERGKITPSRISGTCAKHQRKLSVEIKKARQL 71
Query: 76 GLIAYV 81
LI YV
Sbjct: 72 ALIPYV 77
>gi|312131694|ref|YP_003999034.1| ssu ribosomal protein s18p [Leadbetterella byssophila DSM 17132]
gi|311908240|gb|ADQ18681.1| SSU ribosomal protein S18P [Leadbetterella byssophila DSM 17132]
Length = 84
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R +R+K C G +DYKD L +FL+++GKI+P R++ S K QR +A A+
Sbjct: 8 VERKEQNRKKYCRFKKLGIKYVDYKDPNFLLKFLNEQGKILPRRLTGNSLKFQRRVAIAV 67
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 68 KRARHLALLPYV 79
>gi|253581023|ref|ZP_04858284.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847686|gb|EES75655.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 87
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++ ++ Y
Sbjct: 25 CVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRALTVAIKRARHMSMMPY 84
Query: 81 V 81
+
Sbjct: 85 I 85
>gi|229915540|gb|ACQ90884.1| ribosomal protein S18 [Pedinomonas minor]
Length = 79
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 42/53 (79%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDYK++ LL +F++ GKI+P R++S++ K+ R ++KAIK AR +GL+ +VN
Sbjct: 24 RIDYKNVLLLRKFITIEGKILPRRLTSLTAKQHRSISKAIKNARMMGLLPFVN 76
>gi|227432792|ref|ZP_03914755.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351461|gb|EEJ41724.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 94
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+ +V
Sbjct: 41 IDYKNTELLERFISERGKILPRRLTGTSAKNQRKVTTAIKRARIMALLPFV 91
>gi|260219660|emb|CBA26505.1| 30S ribosomal protein S18 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 93
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVTGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIFQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MLPYSD 89
>gi|255527666|ref|ZP_05394525.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|296186805|ref|ZP_06855206.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|255508646|gb|EET85027.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|296048519|gb|EFG87952.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
Length = 85
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C A IDYKDI L +++++RGKI+P RIS K QR+L AIKRAR +
Sbjct: 19 KRKICSFCMDKAESIDYKDINKLRKYVTERGKILPRRISGNCAKHQRQLTDAIKRARNIA 78
Query: 77 LIAYV 81
L+ +
Sbjct: 79 LLPFT 83
>gi|229824647|ref|ZP_04450716.1| hypothetical protein GCWU000282_01994 [Catonella morbi ATCC
51271]
gi|229786018|gb|EEP22132.1| hypothetical protein GCWU000282_01994 [Catonella morbi ATCC
51271]
Length = 81
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ LL RF+S++GKI+P R++ K QR L AIKRAR +GL+
Sbjct: 16 KVCFFCANHIDHPDYKDVDLLKRFISEKGKILPRRVTGTCAKHQRALTVAIKRARIMGLL 75
Query: 79 AYV 81
+
Sbjct: 76 PFT 78
>gi|313887171|ref|ZP_07820867.1| ribosomal protein S18 [Porphyromonas asaccharolytica PR426713P-I]
gi|332300447|ref|YP_004442368.1| 30S ribosomal protein S18 [Porphyromonas asaccharolytica DSM
20707]
gi|312923400|gb|EFR34213.1| ribosomal protein S18 [Porphyromonas asaccharolytica PR426713P-I]
gi|332177510|gb|AEE13200.1| 30S ribosomal protein S18 [Porphyromonas asaccharolytica DSM
20707]
Length = 88
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C G +DYKD L +FL+ +GKI+P RI+ S K QR +A+A+KRAR+L
Sbjct: 18 QQKKYCRFKKAGIKYVDYKDPEFLKKFLNDQGKILPRRITGNSLKFQRRVAQAVKRARHL 77
Query: 76 GLIAYVN 82
L+ +V
Sbjct: 78 ALLPFVT 84
>gi|86133511|ref|ZP_01052093.1| 30S ribosomal protein S18 [Polaribacter sp. MED152]
gi|85820374|gb|EAQ41521.1| 30S ribosomal protein S18 [Polaribacter sp. MED152]
Length = 98
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C KG IDYKD L ++++GKI+P R++ S K QR++A+AIKRAR+L L+
Sbjct: 31 KYCRFKKKGIKYIDYKDADFLMYLVNEQGKILPRRLTGTSLKYQRKVAQAIKRARHLALM 90
Query: 79 AYVN 82
YV
Sbjct: 91 PYVG 94
>gi|290958445|ref|YP_003489627.1| 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|260647971|emb|CBG71076.1| putative 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
Length = 77
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL IDYKD LL RF+S RGKI R++ VS ++QR+LA+AIK AR + L+ YV
Sbjct: 16 PLDQAKITYIDYKDTDLLRRFISDRGKIRSRRVTRVSAQQQRQLARAIKNAREMALLPYV 75
Query: 82 N 82
+
Sbjct: 76 S 76
>gi|302553143|ref|ZP_07305485.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|302470761|gb|EFL33854.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
Length = 77
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL G +DYKD LL +F+S RGKI R++ VS ++QR+LA+AIK AR + L+ Y
Sbjct: 16 PLDQAGITYVDYKDTDLLRKFVSDRGKIRSRRVTRVSSQQQRQLARAIKNAREMALLPYT 75
Query: 82 N 82
+
Sbjct: 76 S 76
>gi|145597063|ref|YP_001161360.1| 30S ribosomal protein S18 [Salinispora tropica CNB-440]
gi|205617371|sp|A4XDG6|RS18_SALTO RecName: Full=30S ribosomal protein S18
gi|145306400|gb|ABP56982.1| SSU ribosomal protein S18P [Salinispora tropica CNB-440]
Length = 93
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR +
Sbjct: 25 KKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMA 84
Query: 77 LIAYV 81
L+ Y
Sbjct: 85 LLPYT 89
>gi|89900979|ref|YP_523450.1| 30S ribosomal protein S18 [Rhodoferax ferrireducens T118]
gi|123397182|sp|Q21WD4|RS18_RHOFD RecName: Full=30S ribosomal protein S18
gi|89345716|gb|ABD69919.1| SSU ribosomal protein S18P [Rhodoferax ferrireducens T118]
Length = 94
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 25 RKRFCRFTVTGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIFQRQLNTAIKRARFLA 84
Query: 77 LIAYVN 82
++ Y +
Sbjct: 85 MLPYSD 90
>gi|257458034|ref|ZP_05623193.1| 30S ribosomal protein S18 [Treponema vincentii ATCC 35580]
gi|257444747|gb|EEV19831.1| 30S ribosomal protein S18 [Treponema vincentii ATCC 35580]
Length = 103
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + A +IDYKD L RF+++RGKI+P RI+ K QR+LA IKRAR L
Sbjct: 38 RKKVCRFCSQKA-KIDYKDPDSLRRFITERGKILPRRITGTCAKHQRKLALEIKRARALA 96
Query: 77 LIAYV 81
L+ YV
Sbjct: 97 LLPYV 101
>gi|156741510|ref|YP_001431639.1| 30S ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
gi|205556478|sp|A7NJF1|RS181_ROSCS RecName: Full=30S ribosomal protein S18 1
gi|156232838|gb|ABU57621.1| ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
Length = 90
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYKD++ L R +S+RGKI+P R + V + QR L AIKRAR++
Sbjct: 20 RRKVCAFCADKIRVVDYKDVKRLQRCMSERGKILPRRRTGVCARHQRSLTVAIKRARHMA 79
Query: 77 LIAYV 81
L+ +V
Sbjct: 80 LLPFV 84
>gi|88803224|ref|ZP_01118750.1| ribosomal protein S18 [Polaribacter irgensii 23-P]
gi|88780790|gb|EAR11969.1| ribosomal protein S18 [Polaribacter irgensii 23-P]
Length = 98
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + K C KG IDYKD L ++++GKI+P R++ S K QR++A
Sbjct: 20 TPL-DIDTKKEAKYCRFKKKGIKYIDYKDADFLMYLVNEQGKILPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYVN 82
+AIKRAR+L L+ YV
Sbjct: 79 QAIKRARHLALMPYVG 94
>gi|167462797|ref|ZP_02327886.1| 30S ribosomal protein S18 (BS21) [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381355|ref|ZP_08055358.1| 30S ribosomal protein S18-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154931|gb|EFX47202.1| 30S ribosomal protein S18-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 100
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKDI L +F+S+RGKI+P R++ S K QR L AIKRAR + L+ Y
Sbjct: 38 CYFTANKIKHIDYKDIDTLKKFISERGKILPRRVTGTSAKYQRMLTIAIKRARQVALLPY 97
Query: 81 VN 82
Sbjct: 98 TT 99
>gi|20809108|ref|NP_624279.1| 30S ribosomal protein S18 [Thermoanaerobacter tengcongensis MB4]
gi|23822145|sp|Q8R6M3|RS18_THETN RecName: Full=30S ribosomal protein S18
gi|20517786|gb|AAM25883.1| Ribosomal protein S18 [Thermoanaerobacter tengcongensis MB4]
Length = 89
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C RIDYKD+ L +++++RGKI+P RI+ + QR+L KAIKRAR + L+ Y
Sbjct: 27 CAFCADNIDRIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTKAIKRARQIALLPY 86
Query: 81 V 81
Sbjct: 87 T 87
>gi|301632590|ref|XP_002945365.1| PREDICTED: 30S ribosomal protein S18-like [Xenopus (Silurana)
tropicalis]
Length = 93
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKI+P+R++ QR+L AIKRAR+L
Sbjct: 24 RKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQRQLNTAIKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MLPYSD 89
>gi|116327958|ref|YP_797678.1| 30S ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330839|ref|YP_800557.1| 30S ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|59798774|sp|Q72QK2|RS18_LEPIC RecName: Full=30S ribosomal protein S18
gi|73920774|sp|Q8F5K4|RS18_LEPIN RecName: Full=30S ribosomal protein S18
gi|122281407|sp|Q04TH1|RS18_LEPBJ RecName: Full=30S ribosomal protein S18
gi|122284250|sp|Q052K0|RS18_LEPBL RecName: Full=30S ribosomal protein S18
gi|45601200|gb|AAS70682.1| 30S ribosomal protein S18 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|116120702|gb|ABJ78745.1| 30S Ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124528|gb|ABJ75799.1| 30S Ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 81
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSG--KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
R+ +++K C + + A +I+YK+I LL RF++ RGKI+P RI+ S + QR LA+
Sbjct: 7 RKQNKYKKKVCRFTADPELAKQINYKNIELLERFITNRGKIIPRRITGTSARYQRVLARE 66
Query: 69 IKRARYLGLIAY 80
I++AR +GL+ Y
Sbjct: 67 IRKARSIGLLPY 78
>gi|228473999|ref|ZP_04058740.1| ribosomal protein S18 [Capnocytophaga gingivalis ATCC 33624]
gi|326336347|ref|ZP_08202518.1| 30S ribosomal protein S18 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|228274513|gb|EEK13354.1| ribosomal protein S18 [Capnocytophaga gingivalis ATCC 33624]
gi|325691521|gb|EGD33489.1| 30S ribosomal protein S18 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 97
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + + +K C G IDYKD L +F++++GK++P RI+ S K QR++A
Sbjct: 19 TPL-NIDTNKNKKYCRFKKLGIKYIDYKDPDFLLKFINEQGKLLPRRITGTSLKFQRKIA 77
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 78 VAVKRARHLALLPYV 92
>gi|257789801|ref|YP_003180407.1| 30S ribosomal protein S18 [Eggerthella lenta DSM 2243]
gi|317489260|ref|ZP_07947777.1| ribosomal protein S18 [Eggerthella sp. 1_3_56FAA]
gi|325832274|ref|ZP_08165273.1| ribosomal protein S18 [Eggerthella sp. HGA1]
gi|257473698|gb|ACV54018.1| ribosomal protein S18 [Eggerthella lenta DSM 2243]
gi|316911661|gb|EFV33253.1| ribosomal protein S18 [Eggerthella sp. 1_3_56FAA]
gi|325486110|gb|EGC88564.1| ribosomal protein S18 [Eggerthella sp. HGA1]
Length = 86
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD ++L ++++ RGKI P R++ + QR++A A+KRAR +
Sbjct: 9 RRKFCQFCKEDTQYIDYKDTQMLRKYVTDRGKIKPRRVTGACTQHQRDIANAVKRAREMA 68
Query: 77 LIAYV 81
L+ Y
Sbjct: 69 LMPYA 73
>gi|289770861|ref|ZP_06530239.1| 30S ribosomal protein S18 2 [Streptomyces lividans TK24]
gi|289701060|gb|EFD68489.1| 30S ribosomal protein S18 2 [Streptomyces lividans TK24]
Length = 105
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ PL G +DYKD LL +F+S RGKI R++ V+ ++QR+LA+AIK AR +
Sbjct: 39 RQRPNPLDRDGVTYVDYKDTELLRKFVSDRGKIRSRRVTRVTSQQQRQLARAIKNAREMA 98
Query: 77 LIAY 80
L+ Y
Sbjct: 99 LLPY 102
>gi|150002620|ref|YP_001297364.1| 30S ribosomal protein S18 [Bacteroides vulgatus ATCC 8482]
gi|189462618|ref|ZP_03011403.1| hypothetical protein BACCOP_03310 [Bacteroides coprocola DSM
17136]
gi|198276875|ref|ZP_03209406.1| hypothetical protein BACPLE_03080 [Bacteroides plebeius DSM
17135]
gi|212691069|ref|ZP_03299197.1| hypothetical protein BACDOR_00559 [Bacteroides dorei DSM 17855]
gi|224026732|ref|ZP_03645098.1| hypothetical protein BACCOPRO_03489 [Bacteroides coprophilus DSM
18228]
gi|237712431|ref|ZP_04542912.1| 30S ribosomal protein S18 [Bacteroides sp. 9_1_42FAA]
gi|237726621|ref|ZP_04557102.1| 30S ribosomal protein S18 [Bacteroides sp. D4]
gi|254881416|ref|ZP_05254126.1| 30S ribosomal protein S18 [Bacteroides sp. 4_3_47FAA]
gi|265752133|ref|ZP_06087926.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_33FAA]
gi|294776102|ref|ZP_06741595.1| ribosomal protein S18 [Bacteroides vulgatus PC510]
gi|319642803|ref|ZP_07997441.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_40A]
gi|166220923|sp|A6KWD6|RS18_BACV8 RecName: Full=30S ribosomal protein S18
gi|149931044|gb|ABR37742.1| 30S ribosomal protein S18 [Bacteroides vulgatus ATCC 8482]
gi|189430779|gb|EDU99763.1| hypothetical protein BACCOP_03310 [Bacteroides coprocola DSM
17136]
gi|198270400|gb|EDY94670.1| hypothetical protein BACPLE_03080 [Bacteroides plebeius DSM
17135]
gi|212666301|gb|EEB26873.1| hypothetical protein BACDOR_00559 [Bacteroides dorei DSM 17855]
gi|224019968|gb|EEF77966.1| hypothetical protein BACCOPRO_03489 [Bacteroides coprophilus DSM
18228]
gi|229435147|gb|EEO45224.1| 30S ribosomal protein S18 [Bacteroides dorei 5_1_36/D4]
gi|229453752|gb|EEO59473.1| 30S ribosomal protein S18 [Bacteroides sp. 9_1_42FAA]
gi|254834209|gb|EET14518.1| 30S ribosomal protein S18 [Bacteroides sp. 4_3_47FAA]
gi|263236925|gb|EEZ22395.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_33FAA]
gi|294450053|gb|EFG18560.1| ribosomal protein S18 [Bacteroides vulgatus PC510]
gi|317385547|gb|EFV66488.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_40A]
Length = 89
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 85
>gi|330995927|ref|ZP_08319822.1| ribosomal protein S18 [Paraprevotella xylaniphila YIT 11841]
gi|332877546|ref|ZP_08445293.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|329574266|gb|EGG55841.1| ribosomal protein S18 [Paraprevotella xylaniphila YIT 11841]
gi|332684652|gb|EGJ57502.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 88
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 29 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARHLALLPFVT 84
>gi|34540404|ref|NP_904883.1| 30S ribosomal protein S18 [Porphyromonas gingivalis W83]
gi|188994504|ref|YP_001928756.1| 30S ribosomal protein S18 [Porphyromonas gingivalis ATCC 33277]
gi|59798820|sp|Q7MWL2|RS18_PORGI RecName: Full=30S ribosomal protein S18
gi|229560051|sp|B2RIG4|RS18_PORG3 RecName: Full=30S ribosomal protein S18
gi|34396717|gb|AAQ65782.1| ribosomal protein S18 [Porphyromonas gingivalis W83]
gi|188594184|dbj|BAG33159.1| 30S ribosomal protein S18 [Porphyromonas gingivalis ATCC 33277]
Length = 90
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 31 GIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|53715145|ref|YP_101137.1| 30S ribosomal protein S18 [Bacteroides fragilis YCH46]
gi|60683081|ref|YP_213225.1| 30S ribosomal protein S18 [Bacteroides fragilis NCTC 9343]
gi|253566275|ref|ZP_04843729.1| 30S ribosomal protein S18 [Bacteroides sp. 3_2_5]
gi|265766975|ref|ZP_06094804.1| ribosomal protein S18 [Bacteroides sp. 2_1_16]
gi|59798649|sp|Q64PH8|RS18_BACFR RecName: Full=30S ribosomal protein S18
gi|81313865|sp|Q5L9B6|RS18_BACFN RecName: Full=30S ribosomal protein S18
gi|52218010|dbj|BAD50603.1| 30S ribosomal protein S18 [Bacteroides fragilis YCH46]
gi|60494515|emb|CAH09312.1| putative 30S ribosomal protein S18 [Bacteroides fragilis NCTC
9343]
gi|251945379|gb|EES85817.1| 30S ribosomal protein S18 [Bacteroides sp. 3_2_5]
gi|263253352|gb|EEZ24828.1| ribosomal protein S18 [Bacteroides sp. 2_1_16]
gi|301164596|emb|CBW24155.1| putative 30S ribosomal protein S18 [Bacteroides fragilis 638R]
Length = 90
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 86
>gi|255535655|ref|YP_003096026.1| SSU ribosomal protein S18p [Flavobacteriaceae bacterium 3519-10]
gi|255341851|gb|ACU07964.1| SSU ribosomal protein S18p [Flavobacteriaceae bacterium 3519-10]
Length = 100
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+EV L N +K C G +DYKD L +F++++GKI+P R + S K
Sbjct: 16 SEVKFLTPLDINTKTDKKYCRFKKYGIKHVDYKDANFLLQFVNEQGKILPRRYTGTSLKY 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR+++ AIKRAR+L ++ YV
Sbjct: 76 QRKVSAAIKRARHLAMMPYV 95
>gi|108773275|ref|YP_635768.1| ribosomal protein S18 [Chara vulgaris]
gi|122231310|sp|Q1ACH9|RR18_CHAVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|77157931|gb|ABA61972.1| ribosomal protein S18 [Chara vulgaris]
Length = 78
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ P+ K +IDYK++ LL RFLS++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 12 RRRLPPI--KSGEKIDYKNLDLLRRFLSEQGKILSKRVNRLTSKQQRTMTIAIKRARILA 69
Query: 77 LIAYVN 82
LI ++N
Sbjct: 70 LIPFLN 75
>gi|22711969|ref|NP_683799.1| ribosomal protein S18 [Chaetosphaeridium globosum]
gi|25009146|sp|Q8M9Y7|RR18_CHAGL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|22416973|gb|AAM96573.1| ribosomal protein S18 [Chaetosphaeridium globosum]
Length = 79
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ P+ + IDYK++ LL RF+S++GKI+ R++ ++ K+QR + KAIKRAR L
Sbjct: 13 RRRLAPI--RAGESIDYKNVGLLRRFISEQGKILSRRVNRLTAKQQRNMTKAIKRARILA 70
Query: 77 LIAYVN 82
L+ ++N
Sbjct: 71 LLPFLN 76
>gi|295106369|emb|CBL03912.1| SSU ribosomal protein S18P [Gordonibacter pamelaeae 7-10-1-b]
Length = 86
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C A +DYKD ++L ++++ RGKI P R++ + QR++A A+KRAR +
Sbjct: 9 RRKFCQFCKDEANYVDYKDTQMLRKYVTDRGKIKPRRVTGACTQHQRDIANAVKRAREMA 68
Query: 77 LIAYV 81
L+ Y
Sbjct: 69 LMPYA 73
>gi|126661839|ref|ZP_01732838.1| 30S ribosomal protein S18 [Flavobacteria bacterium BAL38]
gi|126625218|gb|EAZ95907.1| 30S ribosomal protein S18 [Flavobacteria bacterium BAL38]
Length = 98
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + + +K C G IDYKD L +F++++GKI+P R++ S K QR+++
Sbjct: 20 TPL-NIDTNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYV 93
>gi|57234187|ref|YP_181760.1| 30S ribosomal protein S18 [Dehalococcoides ethenogenes 195]
gi|123773606|sp|Q3Z7N9|RS18_DEHE1 RecName: Full=30S ribosomal protein S18
gi|57224635|gb|AAW39692.1| ribosomal protein S18 [Dehalococcoides ethenogenes 195]
Length = 147
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + RIDYKD L R++S RGKI P R + + QR LA AIKRAR++
Sbjct: 21 KRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRALANAIKRARFIA 80
Query: 77 LIAYVN 82
L+ +V+
Sbjct: 81 LMPFVS 86
>gi|225011730|ref|ZP_03702168.1| ribosomal protein S18 [Flavobacteria bacterium MS024-2A]
gi|225004233|gb|EEG42205.1| ribosomal protein S18 [Flavobacteria bacterium MS024-2A]
Length = 98
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + S ++K C G +DYKD L +F++++GKI+P R++ S K QR+++
Sbjct: 20 TPL-NIDTSTQKKYCRFKRTGIKYVDYKDPDFLIKFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYV 93
>gi|294633130|ref|ZP_06711689.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|292830911|gb|EFF89261.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
Length = 78
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
++ + + PL G IDYKD LL +F+S RGKI R++ +S ++QR+LA A+K A
Sbjct: 8 TLARKNRPNPLDAAGITYIDYKDTELLRKFISDRGKIRSRRVTRISRRQQRQLAAAVKNA 67
Query: 73 RYLGLIAY 80
R + L+ Y
Sbjct: 68 REMALLPY 75
>gi|237757030|ref|ZP_04585482.1| ribosomal protein S18 [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690810|gb|EEP59966.1| ribosomal protein S18 [Sulfurihydrogenibium yellowstonense SS-5]
Length = 79
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSG-KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C K P +YKDI L F+S+RGKI+PSRIS K QR+LA IK+AR L
Sbjct: 14 RKKYCKFCAEKKEP--NYKDIETLKGFISERGKIIPSRISGTCAKHQRKLAVEIKKARQL 71
Query: 76 GLIAYV 81
L+ YV
Sbjct: 72 ALLPYV 77
>gi|190571062|ref|YP_001975420.1| ribosomal protein S18 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357334|emb|CAQ54764.1| ribosomal protein S18 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 91
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K CPL+ IDYK+I LL++F S G+I+P R++ V +KQR+L AI RAR+L
Sbjct: 22 RPKVCPLAASKDEDIDYKNIDLLSKFTSDYGRILPRRLTGVCARKQRKLRLAIIRARFLA 81
Query: 77 LIAYV 81
L Y
Sbjct: 82 LAPYC 86
>gi|300172598|ref|YP_003771763.1| 30S ribosomal protein S18 [Leuconostoc gasicomitatum LMG 18811]
gi|299886976|emb|CBL90944.1| 30S ribosomal protein S18 [Leuconostoc gasicomitatum LMG 18811]
Length = 94
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+ +V
Sbjct: 41 IDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTIAIKRARIMALLPFV 91
>gi|229822653|ref|YP_002884179.1| ribosomal protein S18 [Beutenbergia cavernae DSM 12333]
gi|259494802|sp|C5C659|RS18_BEUC1 RecName: Full=30S ribosomal protein S18
gi|229568566|gb|ACQ82417.1| ribosomal protein S18 [Beutenbergia cavernae DSM 12333]
Length = 78
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+LR+ ++KS PL IDYKD LL +F+S RGKI R++ VS ++QR +AK
Sbjct: 4 PVLRK---PKKKSNPLKSAKIEAIDYKDTVLLRKFISDRGKIRARRVTGVSVQEQRAIAK 60
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 61 AVKNAREMALLPY 73
>gi|148242324|ref|YP_001227481.1| 30S ribosomal protein S18 [Synechococcus sp. RCC307]
gi|166222252|sp|A5GTB9|RS18_SYNR3 RecName: Full=30S ribosomal protein S18
gi|147850634|emb|CAK28128.1| 30S ribosomal protein S18 [Synechococcus sp. RCC307]
Length = 73
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G P IDYKD LL +F+++RGK++P R++ ++ ++QR+L ++KRAR + L+ +VN
Sbjct: 16 GDP-IDYKDTDLLKKFITERGKLLPRRMTGLTARQQRDLTNSVKRARIVALLPFVN 70
>gi|260063156|ref|YP_003196236.1| 30S ribosomal protein S18 [Robiginitalea biformata HTCC2501]
gi|88783250|gb|EAR14422.1| ribosomal protein S18 [Robiginitalea biformata HTCC2501]
Length = 98
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S +K C G IDYKD L + ++++GKI+P R++ S K QR++A
Sbjct: 20 TPL-NIETSKEKKYCRFKKSGIKYIDYKDPDFLMKLVNEQGKILPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYVN 82
+AIKR+R+L L+ YV
Sbjct: 79 QAIKRSRHLALMPYVG 94
>gi|160947594|ref|ZP_02094761.1| hypothetical protein PEPMIC_01529 [Parvimonas micra ATCC 33270]
gi|158446728|gb|EDP23723.1| hypothetical protein PEPMIC_01529 [Parvimonas micra ATCC 33270]
Length = 74
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K + +DYKD+ L +F+S+RGKI+P R++ + K+QRE+ AI
Sbjct: 1 MQRKFRPRKKVVAYFSDNSKPLDYKDVNTLKKFISERGKILPRRVTGATAKQQREITAAI 60
Query: 70 KRARYLGLIAY 80
K+AR + L+ Y
Sbjct: 61 KKARQVALLPY 71
>gi|221195118|ref|ZP_03568174.1| ribosomal protein S18 [Atopobium rimae ATCC 49626]
gi|221185021|gb|EEE17412.1| ribosomal protein S18 [Atopobium rimae ATCC 49626]
Length = 90
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 13 RRKYCQFCKENTEYIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIALAIKRAREMA 72
Query: 77 LIAYV 81
L+ Y
Sbjct: 73 LLPYT 77
>gi|302384674|ref|YP_003820496.1| ribosomal protein S18 [Clostridium saccharolyticum WM1]
gi|302195302|gb|ADL02873.1| ribosomal protein S18 [Clostridium saccharolyticum WM1]
Length = 88
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGEKNGVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|305667287|ref|YP_003863574.1| 30S ribosomal protein S18 [Maribacter sp. HTCC2170]
gi|88709334|gb|EAR01567.1| ribosomal protein S18 [Maribacter sp. HTCC2170]
Length = 98
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + ++K C G IDYKD L + ++++GK++P R++ S K QR++A
Sbjct: 20 TPL-NIETNTKKKYCRFKKSGIKYIDYKDADFLMKLVNEQGKLLPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYVN 82
+A+KRAR+L L+ YV
Sbjct: 79 QAVKRARHLALMPYVG 94
>gi|319760231|ref|YP_004124169.1| 30S ribosomal protein S18 [Candidatus Blochmannia vafer str.
BVAF]
gi|318038945|gb|ADV33495.1| 30S ribosomal protein S18 [Candidatus Blochmannia vafer str.
BVAF]
Length = 76
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
++ R + HR K C + + +DYKD+ + + + GKI+PSRI+ K QR+LA+A
Sbjct: 1 MILRYIRHR-KFCRFTAEKCTEVDYKDLVKIQSSIIENGKIIPSRITGTRSKYQRQLARA 59
Query: 69 IKRARYLGLIAYVN 82
IK ARYL L+ Y +
Sbjct: 60 IKIARYLSLLPYTD 73
>gi|258645631|ref|ZP_05733100.1| ribosomal protein S18 [Dialister invisus DSM 15470]
gi|260402992|gb|EEW96539.1| ribosomal protein S18 [Dialister invisus DSM 15470]
Length = 77
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYKDI +L RF+S+RGKI+P R++ + K QR++ AIKRAR +
Sbjct: 11 RRKICQGCVDHIENVDYKDIAMLRRFISERGKILPRRVTGICAKHQRKINLAIKRARAIA 70
Query: 77 LIAY 80
L+ +
Sbjct: 71 LLPF 74
>gi|91788895|ref|YP_549847.1| 30S ribosomal protein S18 [Polaromonas sp. JS666]
gi|123059688|sp|Q128U3|RS18_POLSJ RecName: Full=30S ribosomal protein S18
gi|91698120|gb|ABE44949.1| SSU ribosomal protein S18P [Polaromonas sp. JS666]
Length = 94
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKDI L F+++ GKI+P+R++ QR++ A+KRAR+L
Sbjct: 24 RKRFCRFTAAGVEEIDYKDIDTLRDFVAENGKIIPARLTGTRAIFQRQINTAVKRARFLA 83
Query: 77 LIAYVN 82
++ Y +
Sbjct: 84 MLPYSD 89
>gi|317133426|ref|YP_004092740.1| ribosomal protein S18 [Ethanoligenens harbinense YUAN-3]
gi|315471405|gb|ADU28009.1| ribosomal protein S18 [Ethanoligenens harbinense YUAN-3]
Length = 84
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKDI L ++LS+R KI+P R++ QREL AIKRAR+L L+ Y
Sbjct: 22 CSFCVDKVESIDYKDIAKLRKYLSERAKILPRRVTGTCAHHQRELTIAIKRARHLALLPY 81
Query: 81 VN 82
V+
Sbjct: 82 VS 83
>gi|323485447|ref|ZP_08090795.1| hypothetical protein HMPREF9474_02546 [Clostridium symbiosum
WAL-14163]
gi|323695065|ref|ZP_08109208.1| ribosomal protein S18 [Clostridium symbiosum WAL-14673]
gi|323401310|gb|EGA93660.1| hypothetical protein HMPREF9474_02546 [Clostridium symbiosum
WAL-14163]
gi|323500867|gb|EGB16786.1| ribosomal protein S18 [Clostridium symbiosum WAL-14673]
Length = 88
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGEKNGVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|73748806|ref|YP_308045.1| 30S ribosomal protein S18 [Dehalococcoides sp. CBDB1]
gi|147669567|ref|YP_001214385.1| 30S ribosomal protein S18 [Dehalococcoides sp. BAV1]
gi|289432827|ref|YP_003462700.1| ribosomal protein S18 [Dehalococcoides sp. GT]
gi|123773677|sp|Q3ZY14|RS18_DEHSC RecName: Full=30S ribosomal protein S18
gi|205557202|sp|A5FQL1|RS18_DEHSB RecName: Full=30S ribosomal protein S18
gi|73660522|emb|CAI83129.1| ribosomal protein S18 [Dehalococcoides sp. CBDB1]
gi|146270515|gb|ABQ17507.1| SSU ribosomal protein S18P [Dehalococcoides sp. BAV1]
gi|288946547|gb|ADC74244.1| ribosomal protein S18 [Dehalococcoides sp. GT]
Length = 147
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + RIDYKD L R++S RGKI P R + + QR LA AIKRAR++
Sbjct: 21 KRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRALANAIKRARFIA 80
Query: 77 LIAYVN 82
L+ +V+
Sbjct: 81 LMPFVS 86
>gi|159901475|ref|YP_001547722.1| 30S ribosomal protein S18 [Herpetosiphon aurantiacus ATCC 23779]
gi|205558504|sp|A9B461|RS18_HERA2 RecName: Full=30S ribosomal protein S18
gi|159894514|gb|ABX07594.1| ribosomal protein S18 [Herpetosiphon aurantiacus ATCC 23779]
Length = 86
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 11 RRNVSHRRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR + RRK C + +G P DYKDI+ L R +S RGKI+P R + K QR+L AI
Sbjct: 11 RRKYTPRRKVCVFTAEGIVP--DYKDIKRLQRMVSDRGKILPRRRTGTCAKYQRKLNVAI 68
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ +V+
Sbjct: 69 KRARHLALLPFVS 81
>gi|257093840|ref|YP_003167481.1| 30S ribosomal protein S18 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046364|gb|ACV35552.1| ribosomal protein S18 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 91
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + + IDYKD+ L ++++ KI+P+R++ QR L+ AIKRAR+L
Sbjct: 23 RRKFCRFTAEKMEEIDYKDVDLFKEYVAENAKIMPARLTGTKAGYQRMLSVAIKRARFLA 82
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 83 LLPYTD 88
>gi|258405219|ref|YP_003197961.1| 30S ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
gi|257797446|gb|ACV68383.1| ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR R+K C +DYK+I LL F++ RGKI+ RI+ K QR+L + I
Sbjct: 3 FRRKFRPRKKVCRFCQDNELNLDYKNIELLQDFVTARGKIIARRITGTCAKHQRQLTREI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y
Sbjct: 63 KRARQMALLYYTT 75
>gi|270308305|ref|YP_003330363.1| ribosomal protein S18 [Dehalococcoides sp. VS]
gi|270154197|gb|ACZ62035.1| ribosomal protein S18 [Dehalococcoides sp. VS]
Length = 147
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + RIDYKD L R++S RGKI P R + + QR LA AIKRAR++
Sbjct: 21 KRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRALANAIKRARFIA 80
Query: 77 LIAYVN 82
L+ +V+
Sbjct: 81 LMPFVS 86
>gi|313884313|ref|ZP_07818076.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620466|gb|EFR31892.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
Length = 77
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ LL RF+S +GKI+P R++ K QR L AIKRAR +GL+
Sbjct: 12 KVCYFCANHIDHPDYKDVELLQRFISDKGKILPRRVTGTCAKHQRALTIAIKRARIMGLL 71
Query: 79 AY 80
+
Sbjct: 72 PF 73
>gi|282860311|ref|ZP_06269380.1| ribosomal protein S18 [Prevotella bivia JCVIHMP010]
gi|282586908|gb|EFB92144.1| ribosomal protein S18 [Prevotella bivia JCVIHMP010]
Length = 89
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|171059509|ref|YP_001791858.1| 30S ribosomal protein S18 [Leptothrix cholodnii SP-6]
gi|229560044|sp|B1XXH3|RS18_LEPCP RecName: Full=30S ribosomal protein S18
gi|170776954|gb|ACB35093.1| ribosomal protein S18 [Leptothrix cholodnii SP-6]
Length = 94
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ +L F+ + GKI P+R++ QR+L AIKRAR+L
Sbjct: 25 RKRFCRFTVTGVKEIDYKDLDVLRDFVGENGKITPARLTGTRAFFQRQLTTAIKRARFLA 84
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 85 LLPYSD 90
>gi|330752552|emb|CBL87499.1| Ribosomal protein S18 [uncultured Flavobacteria bacterium]
Length = 89
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
++P + +R+ S K C G +DYKD L RFL+++GKI+P RI+ S K QR
Sbjct: 10 LSPVDIEKRSQS---KYCRFKKMGIKYVDYKDPDFLIRFLNEQGKILPRRITGNSLKFQR 66
Query: 64 ELAKAIKRARYLGLIAYV 81
+A AIKRAR L L+ YV
Sbjct: 67 RVAVAIKRARQLALLPYV 84
>gi|261880412|ref|ZP_06006839.1| 30S ribosomal protein S18 [Prevotella bergensis DSM 17361]
gi|270332881|gb|EFA43667.1| 30S ribosomal protein S18 [Prevotella bergensis DSM 17361]
Length = 90
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 86
>gi|332520811|ref|ZP_08397271.1| ribosomal protein S18 [Lacinutrix algicola 5H-3-7-4]
gi|332043341|gb|EGI79537.1| ribosomal protein S18 [Lacinutrix algicola 5H-3-7-4]
Length = 98
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + S ++K C G +DYKD L F++++GKI+P R++ S K QR+++
Sbjct: 20 TPL-NIDTSKQKKYCRFKKSGIKYVDYKDADWLLGFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALLPYVT 94
>gi|289422550|ref|ZP_06424393.1| ribosomal protein S18 [Peptostreptococcus anaerobius 653-L]
gi|289157122|gb|EFD05744.1| ribosomal protein S18 [Peptostreptococcus anaerobius 653-L]
Length = 75
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYK+ + L +F+++RGKI+P RI+ K QREL KAIK AR + L+ Y
Sbjct: 13 CQFCADKNTKIDYKNYQKLEKFVTERGKILPRRITGTCAKHQRELTKAIKMARNIALLPY 72
Query: 81 V 81
Sbjct: 73 T 73
>gi|260911679|ref|ZP_05918259.1| 30S ribosomal protein S18 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288927613|ref|ZP_06421460.1| ribosomal protein S18 [Prevotella sp. oral taxon 317 str. F0108]
gi|260634227|gb|EEX52337.1| 30S ribosomal protein S18 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288330447|gb|EFC69031.1| ribosomal protein S18 [Prevotella sp. oral taxon 317 str. F0108]
Length = 89
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|282855813|ref|ZP_06265115.1| ribosomal protein S18 [Pyramidobacter piscolens W5455]
gi|282586327|gb|EFB91593.1| ribosomal protein S18 [Pyramidobacter piscolens W5455]
Length = 82
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 PLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ +R RR K C +DYKD+ L +++S+RGKI+P R++ K QR+L
Sbjct: 6 PMRKRGGGKRRPKVCFFCVDKLDEVDYKDVERLKKYVSERGKIIPRRVTGNCAKHQRQLT 65
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR++ L+ Y
Sbjct: 66 IAVKRARFMALLPYT 80
>gi|224368965|ref|YP_002603129.1| 30S ribosomal protein S18 [Desulfobacterium autotrophicum HRM2]
gi|223691682|gb|ACN14965.1| RpsR [Desulfobacterium autotrophicum HRM2]
Length = 83
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C I YKD + L F+++RGKI+P RI+ K QR L+ AIK+AR +
Sbjct: 14 QRRKVCRFCADSTLEISYKDAKALRSFITERGKIIPRRITGTCAKHQRVLSSAIKQARTI 73
Query: 76 GLIAYVN 82
L+ YV
Sbjct: 74 ALLPYVG 80
>gi|300857396|ref|YP_003782380.1| 30S ribosomal protein S18 [Clostridium ljungdahlii DSM 13528]
gi|300437511|gb|ADK17278.1| 30S ribosomal protein S18 [Clostridium ljungdahlii DSM 13528]
Length = 85
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + IDYKDI L +++++RGKI+P RIS K QREL AIKRAR +
Sbjct: 19 KRKVCAFCMDKSEFIDYKDINKLRKYVTERGKILPRRISGNCAKHQRELTVAIKRARNIA 78
Query: 77 LIAYV 81
L+ +
Sbjct: 79 LLPFT 83
>gi|167038652|ref|YP_001666230.1| 30S ribosomal protein S18 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167041002|ref|YP_001663987.1| 30S ribosomal protein S18 [Thermoanaerobacter sp. X514]
gi|256751478|ref|ZP_05492356.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus CCSD1]
gi|300913787|ref|ZP_07131104.1| ribosomal protein S18 [Thermoanaerobacter sp. X561]
gi|307265461|ref|ZP_07547017.1| ribosomal protein S18 [Thermoanaerobacter wiegelii Rt8.B1]
gi|307725527|ref|YP_003905278.1| 30S ribosomal protein S18 [Thermoanaerobacter sp. X513]
gi|320117044|ref|YP_004187203.1| 30S ribosomal protein S18 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326391890|ref|ZP_08213400.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus JW 200]
gi|229560075|sp|B0K8G2|RS18_THEP3 RecName: Full=30S ribosomal protein S18
gi|229560076|sp|B0K5L7|RS18_THEPX RecName: Full=30S ribosomal protein S18
gi|166855242|gb|ABY93651.1| ribosomal protein S18 [Thermoanaerobacter sp. X514]
gi|166857486|gb|ABY95894.1| ribosomal protein S18 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749697|gb|EEU62723.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus CCSD1]
gi|300890472|gb|EFK85617.1| ribosomal protein S18 [Thermoanaerobacter sp. X561]
gi|306919575|gb|EFN49793.1| ribosomal protein S18 [Thermoanaerobacter wiegelii Rt8.B1]
gi|307582588|gb|ADN55987.1| ribosomal protein S18 [Thermoanaerobacter sp. X513]
gi|319930135|gb|ADV80820.1| ribosomal protein S18 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325992052|gb|EGD50534.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus JW 200]
Length = 88
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYKD+ L +++++RGKI+P RI+ + QR+L KAIKRAR + L+ Y
Sbjct: 26 CAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTKAIKRARQIALLPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|320161644|ref|YP_004174869.1| 30S ribosomal protein S18 [Anaerolinea thermophila UNI-1]
gi|319995498|dbj|BAJ64269.1| 30S ribosomal protein S18 [Anaerolinea thermophila UNI-1]
Length = 90
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P +RR V+ R K C +IDYK + LL R++++ GKI P R + K QRELA
Sbjct: 12 PQMRRYVA-RPKICQFCVDKNIKIDYKAVDLLRRYVTEEGKIRPRRQTGTCAKHQRELAT 70
Query: 68 AIKRARYLGLIAYV 81
AIKRAR+L + +V
Sbjct: 71 AIKRARHLAFLPFV 84
>gi|283798280|ref|ZP_06347433.1| ribosomal protein S18 [Clostridium sp. M62/1]
gi|291074059|gb|EFE11423.1| ribosomal protein S18 [Clostridium sp. M62/1]
gi|295090607|emb|CBK76714.1| SSU ribosomal protein S18P [Clostridium cf. saccharolyticum K10]
gi|295115695|emb|CBL36542.1| SSU ribosomal protein S18P [butyrate-producing bacterium SM4/1]
Length = 88
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G+ IDYKD L R++S+RGKI+P RI+ K QR L AIKRAR++ L+ Y
Sbjct: 26 CVFCGEKNGTIDYKDTNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|54026952|ref|YP_121194.1| 30S ribosomal protein S18 [Nocardia farcinica IFM 10152]
gi|59798929|sp|Q5YPR1|RS182_NOCFA RecName: Full=30S ribosomal protein S18 2
gi|54018460|dbj|BAD59830.1| putative ribosomal protein S18 [Nocardia farcinica IFM 10152]
Length = 84
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP+ +R + R K PL G +DYKD+ LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 APSKKVRAEQARRPKKNPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 66 VAVAVKNAREMALLPFTS 83
>gi|115378659|ref|ZP_01465809.1| ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|310823079|ref|YP_003955437.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|115364325|gb|EAU63410.1| ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|309396151|gb|ADO73610.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
Length = 146
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + ++D+KD L F+++RGKI+P RIS K QRE+A AIKRAR L
Sbjct: 78 RKKVCRFCAEKNAKVDFKDQATLKYFVTERGKIIPRRISGNCAKHQREVAIAIKRARGLA 137
Query: 77 LIAY 80
L+ Y
Sbjct: 138 LLPY 141
>gi|255011271|ref|ZP_05283397.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
gi|313149083|ref|ZP_07811276.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
gi|313137850|gb|EFR55210.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
Length = 90
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 35 IDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 86
>gi|311746134|ref|ZP_07719919.1| ribosomal protein S18 [Algoriphagus sp. PR1]
gi|126576355|gb|EAZ80633.1| ribosomal protein S18 [Algoriphagus sp. PR1]
Length = 83
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++++GKI+P R++ S K Q+++A AIK+AR+
Sbjct: 12 ENRKKYCRFKKHGIKYIDYKDPNFLLKFVNEQGKILPRRLTGNSAKYQKKVANAIKKARH 71
Query: 75 LGLIAYV 81
L L+ +V
Sbjct: 72 LALLPFV 78
>gi|325270188|ref|ZP_08136795.1| 30S ribosomal protein S18 [Prevotella multiformis DSM 16608]
gi|324987489|gb|EGC19465.1| 30S ribosomal protein S18 [Prevotella multiformis DSM 16608]
Length = 89
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 30 GIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|238925607|ref|YP_002939124.1| 30S ribosomal protein S18 [Eubacterium rectale ATCC 33656]
gi|238877283|gb|ACR76990.1| 30S ribosomal protein S18 [Eubacterium rectale ATCC 33656]
gi|291524157|emb|CBK89744.1| SSU ribosomal protein S18P [Eubacterium rectale DSM 17629]
gi|291527800|emb|CBK93386.1| SSU ribosomal protein S18P [Eubacterium rectale M104/1]
Length = 85
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD L R++S+RGKI+P RI+ K QR L AIKRAR+L L+ Y
Sbjct: 24 CVFCGKDNV-IDYKDTNKLKRYISERGKILPRRITGNCAKHQRALTVAIKRARHLALMPY 82
Query: 81 V 81
V
Sbjct: 83 V 83
>gi|18311622|ref|NP_563556.1| 30S ribosomal protein S18 [Clostridium perfringens str. 13]
gi|110801194|ref|YP_697330.1| 30S ribosomal protein S18 [Clostridium perfringens ATCC 13124]
gi|110801451|ref|YP_699889.1| 30S ribosomal protein S18 [Clostridium perfringens SM101]
gi|168207913|ref|ZP_02633918.1| ribosomal protein S18 [Clostridium perfringens E str. JGS1987]
gi|168211574|ref|ZP_02637199.1| ribosomal protein S18 [Clostridium perfringens B str. ATCC 3626]
gi|168214826|ref|ZP_02640451.1| ribosomal protein S18 [Clostridium perfringens CPE str. F4969]
gi|168218034|ref|ZP_02643659.1| ribosomal protein S18 [Clostridium perfringens NCTC 8239]
gi|169343454|ref|ZP_02864454.1| ribosomal protein S18 [Clostridium perfringens C str. JGS1495]
gi|182626399|ref|ZP_02954152.1| ribosomal protein S18 [Clostridium perfringens D str. JGS1721]
gi|20978678|sp|Q8XH45|RS18_CLOPE RecName: Full=30S ribosomal protein S18
gi|122958625|sp|Q0TM10|RS18_CLOP1 RecName: Full=30S ribosomal protein S18
gi|123341463|sp|Q0SPR8|RS18_CLOPS RecName: Full=30S ribosomal protein S18
gi|18146306|dbj|BAB82346.1| 30S ribosomal protein S18 [Clostridium perfringens str. 13]
gi|110675841|gb|ABG84828.1| 30S ribosomal protein S18 [Clostridium perfringens ATCC 13124]
gi|110681952|gb|ABG85322.1| 30S ribosomal protein S18 [Clostridium perfringens SM101]
gi|169298406|gb|EDS80495.1| ribosomal protein S18 [Clostridium perfringens C str. JGS1495]
gi|170660796|gb|EDT13479.1| ribosomal protein S18 [Clostridium perfringens E str. JGS1987]
gi|170710455|gb|EDT22637.1| ribosomal protein S18 [Clostridium perfringens B str. ATCC 3626]
gi|170713723|gb|EDT25905.1| ribosomal protein S18 [Clostridium perfringens CPE str. F4969]
gi|177908273|gb|EDT70826.1| ribosomal protein S18 [Clostridium perfringens D str. JGS1721]
gi|182379953|gb|EDT77432.1| ribosomal protein S18 [Clostridium perfringens NCTC 8239]
Length = 80
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C A IDYKD+ L +++++RGKI+P RIS K QR+L AIKR+R +
Sbjct: 14 RKKVCIFCVDKAESIDYKDVAKLKKYITERGKILPRRISGTCAKHQRQLTDAIKRSRNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|169824836|ref|YP_001692447.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 29328]
gi|297587219|ref|ZP_06945864.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 53516]
gi|302379548|ref|ZP_07268033.1| ribosomal protein S18 [Finegoldia magna ACS-171-V-Col3]
gi|303234545|ref|ZP_07321182.1| ribosomal protein S18 [Finegoldia magna BVS033A4]
gi|167831641|dbj|BAG08557.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 29328]
gi|297575200|gb|EFH93919.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 53516]
gi|302312455|gb|EFK94451.1| ribosomal protein S18 [Finegoldia magna ACS-171-V-Col3]
gi|302494379|gb|EFL54148.1| ribosomal protein S18 [Finegoldia magna BVS033A4]
Length = 74
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P IDYKD+ +L ++S+RGKI+P R++ ++ K QR++ AI
Sbjct: 1 MQRRFRPRKKIDPFQKDKTKVIDYKDVNMLKNYISERGKILPRRVTGLNAKHQRQITDAI 60
Query: 70 KRARYLGLIAY 80
K+AR + L+ Y
Sbjct: 61 KKARQVALLPY 71
>gi|296136558|ref|YP_003643800.1| ribosomal protein S18 [Thiomonas intermedia K12]
gi|295796680|gb|ADG31470.1| ribosomal protein S18 [Thiomonas intermedia K12]
Length = 96
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + RIDYKD+ +L +++ +I+P+R++ S QR+L AIKRAR+L
Sbjct: 27 RKRFCRFTVAKVERIDYKDVDVLKDLIAENARIIPARLTGTSAHYQRQLNTAIKRARFLA 86
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 87 LLPYTDL 93
>gi|170288132|ref|YP_001738370.1| ribosomal protein S18 [Thermotoga sp. RQ2]
gi|229560077|sp|B1L8K5|RS18_THESQ RecName: Full=30S ribosomal protein S18
gi|170175635|gb|ACB08687.1| ribosomal protein S18 [Thermotoga sp. RQ2]
Length = 75
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+ +
Sbjct: 23 VDYKDTRLLSEFLTDKGKIIPKRLTGTCAKHQRMVKVAIKRARQMGLLPYLKI 75
>gi|312601294|gb|ADQ90549.1| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 168]
Length = 87
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+C IDYKDI +L RF++ GKI PSRI+ K QR+LA A+KRAR++ L+
Sbjct: 13 TCQFCEAKLFYIDYKDIEVLQRFINTFGKIQPSRITGNCAKHQRKLALAVKRARFVALLP 72
Query: 80 YV 81
++
Sbjct: 73 FI 74
>gi|224179528|ref|YP_002601063.1| ribosomal protein S18 [Monomastix sp. OKE-1]
gi|217314571|gb|ACK36914.1| ribosomal protein S18 [Monomastix sp. OKE-1]
Length = 62
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+IDYKD+ L RF++++GKI+ R + + K+QREL KA+K+AR LGL+ +
Sbjct: 4 TQIDYKDVAYLRRFITEQGKILSRRFTGLKAKQQRELTKAVKQARILGLLGF 55
>gi|184201983|ref|YP_001856190.1| 30S ribosomal protein S18 [Kocuria rhizophila DC2201]
gi|205558187|sp|B2GJD6|RS18_KOCRD RecName: Full=30S ribosomal protein S18
gi|183582213|dbj|BAG30684.1| 30S ribosomal protein S18 [Kocuria rhizophila DC2201]
Length = 78
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K PL IDYKD+ LL +F+S RGKI R++ VS ++QR++A+AIK AR + L+
Sbjct: 12 KQNPLKAADVTEIDYKDVALLRKFISDRGKIRARRVTGVSVQEQRKIAQAIKNAREVALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|146301223|ref|YP_001195814.1| 30S ribosomal protein S18 [Flavobacterium johnsoniae UW101]
gi|205557694|sp|A5FE76|RS18_FLAJO RecName: Full=30S ribosomal protein S18
gi|146155641|gb|ABQ06495.1| 30S ribosomal protein S18 [Flavobacterium johnsoniae UW101]
Length = 98
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + +K C G IDYKD L +F++++GKI+P R++ S K QR+++
Sbjct: 20 TPL-NIETNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYV 93
>gi|282880329|ref|ZP_06289043.1| ribosomal protein S18 [Prevotella timonensis CRIS 5C-B1]
gi|281305831|gb|EFA97877.1| ribosomal protein S18 [Prevotella timonensis CRIS 5C-B1]
Length = 89
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|282877913|ref|ZP_06286722.1| ribosomal protein S18 [Prevotella buccalis ATCC 35310]
gi|281299914|gb|EFA92274.1| ribosomal protein S18 [Prevotella buccalis ATCC 35310]
Length = 90
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|160902036|ref|YP_001567617.1| ribosomal protein S18 [Petrotoga mobilis SJ95]
gi|254812950|sp|A9BH64|RS18_PETMO RecName: Full=30S ribosomal protein S18
gi|160359680|gb|ABX31294.1| ribosomal protein S18 [Petrotoga mobilis SJ95]
Length = 76
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K C L IDYKD+R L F++ +GKI+P RI+ K QR + AI+RAR +
Sbjct: 10 RIKKCKLCRDNVEYIDYKDVRKLKEFMNDKGKILPKRINGNCAKHQRMVRTAIQRARKMM 69
Query: 77 LIAYVN 82
L+ YVN
Sbjct: 70 LVPYVN 75
>gi|304383092|ref|ZP_07365567.1| 30S ribosomal protein S18 [Prevotella marshii DSM 16973]
gi|304335778|gb|EFM02033.1| 30S ribosomal protein S18 [Prevotella marshii DSM 16973]
Length = 88
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 29 GIKYIDYKDPDFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 84
>gi|256425943|ref|YP_003126596.1| ribosomal protein S18 [Chitinophaga pinensis DSM 2588]
gi|256040851|gb|ACU64395.1| ribosomal protein S18 [Chitinophaga pinensis DSM 2588]
Length = 88
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G +DYKD L +FL+ +GK++P RIS S K QR++A+AIK+AR + L
Sbjct: 20 KKYCRFKKLGIRYVDYKDAEFLKKFLNDQGKMLPRRISGNSLKFQRKVAQAIKKARQMAL 79
Query: 78 IAYVN 82
+ YV
Sbjct: 80 LPYVT 84
>gi|220927534|ref|YP_002504443.1| 30S ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|219997862|gb|ACL74463.1| ribosomal protein S18 [Clostridium cellulolyticum H10]
Length = 96
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C A IDYKDI + +++S+RGKI+P RIS K QR+L A+KRAR++
Sbjct: 30 KKKVCSFCVDKATDIDYKDIAKIRKYVSERGKILPRRISGNCAKHQRQLTVAVKRARHIA 89
Query: 77 LIAYV 81
L+ Y
Sbjct: 90 LLPYT 94
>gi|320537662|ref|ZP_08037595.1| ribosomal protein S18 [Treponema phagedenis F0421]
gi|320145503|gb|EFW37186.1| ribosomal protein S18 [Treponema phagedenis F0421]
Length = 102
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K C + +IDYKD L RF+++RGKI+P RI+ K QR+LA IKRAR L
Sbjct: 35 YRKKVCRFCSQKI-KIDYKDPDALRRFITERGKILPRRITGTCAKHQRKLATEIKRARAL 93
Query: 76 GLIAYV 81
L+ +V
Sbjct: 94 ALLPFV 99
>gi|154249360|ref|YP_001410185.1| 30S ribosomal protein S18 [Fervidobacterium nodosum Rt17-B1]
gi|254811617|sp|A7HKU5|RS18_FERNB RecName: Full=30S ribosomal protein S18
gi|154153296|gb|ABS60528.1| ribosomal protein S18 [Fervidobacterium nodosum Rt17-B1]
Length = 76
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C + +DYKDIR+L FL+++GKI+P R++ K QR + AIKRAR + L+
Sbjct: 12 KACKMCEMNVEYVDYKDIRILKDFLNEKGKILPRRLTGNCAKHQRMVKIAIKRARQMALL 71
Query: 79 AYV 81
Y+
Sbjct: 72 PYI 74
>gi|29831189|ref|NP_825823.1| 30S ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|59798959|sp|Q82EG9|RS182_STRAW RecName: Full=30S ribosomal protein S18 2
gi|29608303|dbj|BAC72358.1| putative ribosomal protein S18 [Streptomyces avermitilis MA-4680]
Length = 78
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R V+ + PL G IDYKD LL +FLS RGKI R++ V+ ++QR LA+A+K
Sbjct: 7 RKVASTPRPNPLDQNGITYIDYKDTDLLRKFLSDRGKIRSRRVTRVTAQQQRLLARAVKN 66
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 67 AREMALLPY 75
>gi|253681270|ref|ZP_04862068.1| ribosomal protein S18 [Clostridium botulinum D str. 1873]
gi|331268206|ref|YP_004394698.1| 30S ribosomal protein S18 [Clostridium botulinum BKT015925]
gi|253562508|gb|EES91959.1| ribosomal protein S18 [Clostridium botulinum D str. 1873]
gi|329124756|gb|AEB74701.1| ribosomal protein S18 [Clostridium botulinum BKT015925]
Length = 78
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ L +F+++RGKI+P RIS K QREL AIKRAR + L+ +
Sbjct: 16 CAFCADKSSFIDYKDVNKLRKFVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLPF 75
Query: 81 V 81
Sbjct: 76 T 76
>gi|291458693|ref|ZP_06598083.1| ribosomal protein S18 [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418610|gb|EFE92329.1| ribosomal protein S18 [Oribacterium sp. oral taxon 078 str. F0262]
Length = 118
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C A +D+KDI L +++S+RGKI+P RI+ QR + AIKRAR++
Sbjct: 52 RRKVCVFCSDKAKPVDFKDIATLRKYISERGKILPRRITGTCATHQRAITTAIKRARHIA 111
Query: 77 LIAY 80
L+ Y
Sbjct: 112 LLPY 115
>gi|294673370|ref|YP_003573986.1| 30S ribosomal protein S18 [Prevotella ruminicola 23]
gi|294473390|gb|ADE82779.1| ribosomal protein S18 [Prevotella ruminicola 23]
Length = 88
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 84
>gi|149372600|ref|ZP_01891712.1| 30S ribosomal protein S18 [unidentified eubacterium SCB49]
gi|149354643|gb|EDM43207.1| 30S ribosomal protein S18 [unidentified eubacterium SCB49]
Length = 98
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + ++K C G +DYKD L RF++++GK++P R++ S K QR++A
Sbjct: 20 TPL-NIETAKQKKYCRFKKSGIKYVDYKDGEWLLRFVNEQGKLLPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYVN 82
A+KR+R+L L+ YV
Sbjct: 79 VAVKRSRHLALMPYVT 94
>gi|220915256|ref|YP_002490560.1| ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-1]
gi|254765404|sp|B8J802|RS18_ANAD2 RecName: Full=30S ribosomal protein S18
gi|219953110|gb|ACL63494.1| ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 133
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C A ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 67 KVCRFCADKALKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 126
Query: 79 AYV 81
Y
Sbjct: 127 PYT 129
>gi|197120545|ref|YP_002132496.1| 30S ribosomal protein S18 [Anaeromyxobacter sp. K]
gi|229470520|sp|B4ULC0|RS18_ANASK RecName: Full=30S ribosomal protein S18
gi|196170394|gb|ACG71367.1| ribosomal protein S18 [Anaeromyxobacter sp. K]
Length = 135
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C A ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 69 KVCRFCADKALKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 128
Query: 79 AYV 81
Y
Sbjct: 129 PYT 131
>gi|150025893|ref|YP_001296719.1| 30S ribosomal protein S18 [Flavobacterium psychrophilum JIP02/86]
gi|205557707|sp|A6H0P2|RS18_FLAPJ RecName: Full=30S ribosomal protein S18
gi|149772434|emb|CAL43916.1| 30S ribosomal protein S18 [Flavobacterium psychrophilum JIP02/86]
Length = 98
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + + +K C G IDYKD L +F++++GKI+P R++ S K QR+++
Sbjct: 20 TPL-NIDTNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L + YV
Sbjct: 79 VAVKRARHLAFMPYV 93
>gi|239978061|ref|ZP_04700585.1| putative 30S ribosomal protein S18 [Streptomyces albus J1074]
gi|291449962|ref|ZP_06589352.1| 30S ribosomal protein S18 2 [Streptomyces albus J1074]
gi|291352911|gb|EFE79813.1| 30S ribosomal protein S18 2 [Streptomyces albus J1074]
Length = 79
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G IDYKD LL +FLS RGKI RI+ V+ ++QR+LA+A++ AR + L+ Y
Sbjct: 18 PLLAAGITYIDYKDTELLRKFLSDRGKIRSRRITRVTAQQQRQLARAVRNAREMALLPY 76
>gi|257783834|ref|YP_003179051.1| 30S ribosomal protein S18 [Atopobium parvulum DSM 20469]
gi|257472341|gb|ACV50460.1| ribosomal protein S18 [Atopobium parvulum DSM 20469]
Length = 90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 13 RRKYCQFCKEETEFIDYKDTQLLRKYMTDRGKIKPRRVTGTCTQHQHDIALAIKRAREMA 72
Query: 77 LIAYV 81
L+ Y
Sbjct: 73 LLPYT 77
>gi|281420810|ref|ZP_06251809.1| ribosomal protein S18 [Prevotella copri DSM 18205]
gi|281405102|gb|EFB35782.1| ribosomal protein S18 [Prevotella copri DSM 18205]
Length = 89
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|300727908|ref|ZP_07061286.1| ribosomal protein S18 [Prevotella bryantii B14]
gi|299774750|gb|EFI71364.1| ribosomal protein S18 [Prevotella bryantii B14]
Length = 90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|225873662|ref|YP_002755121.1| ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
gi|254765401|sp|C1F903|RS18_ACIC5 RecName: Full=30S ribosomal protein S18
gi|225791607|gb|ACO31697.1| ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
Length = 105
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + I Y+D+RLL +F+++RGKIVP R++ V QR L +AIK+AR +
Sbjct: 38 RKKVCKFCTEKIDAIPYRDVRLLQQFVAERGKIVPRRLTGVCTTHQRRLTRAIKQARNIA 97
Query: 77 LIAY 80
L+ +
Sbjct: 98 LLPF 101
>gi|260592153|ref|ZP_05857611.1| ribosomal protein S18 [Prevotella veroralis F0319]
gi|288802528|ref|ZP_06407967.1| ribosomal protein S18 [Prevotella melaninogenica D18]
gi|302346422|ref|YP_003814720.1| ribosomal protein S18 [Prevotella melaninogenica ATCC 25845]
gi|325857451|ref|ZP_08172506.1| ribosomal protein S18 [Prevotella denticola CRIS 18C-A]
gi|327314149|ref|YP_004329586.1| 30S ribosomal protein S18 [Prevotella denticola F0289]
gi|260535787|gb|EEX18404.1| ribosomal protein S18 [Prevotella veroralis F0319]
gi|288335056|gb|EFC73492.1| ribosomal protein S18 [Prevotella melaninogenica D18]
gi|302150343|gb|ADK96604.1| ribosomal protein S18 [Prevotella melaninogenica ATCC 25845]
gi|325483161|gb|EGC86141.1| ribosomal protein S18 [Prevotella denticola CRIS 18C-A]
gi|326944059|gb|AEA19944.1| ribosomal protein S18 [Prevotella denticola F0289]
Length = 89
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 GIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|256833731|ref|YP_003162458.1| 30S ribosomal protein S18 [Jonesia denitrificans DSM 20603]
gi|256687262|gb|ACV10155.1| ribosomal protein S18 [Jonesia denitrificans DSM 20603]
Length = 78
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++KS PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR +
Sbjct: 10 KKKSNPLKSAKIDAVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIARAVKNAREMA 69
Query: 77 LIAY 80
L+ Y
Sbjct: 70 LLPY 73
>gi|323345547|ref|ZP_08085770.1| 30S ribosomal protein S18 [Prevotella oralis ATCC 33269]
gi|323093661|gb|EFZ36239.1| 30S ribosomal protein S18 [Prevotella oralis ATCC 33269]
Length = 90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|238020010|ref|ZP_04600436.1| hypothetical protein VEIDISOL_01886 [Veillonella dispar ATCC
17748]
gi|269797402|ref|YP_003311302.1| ribosomal protein S18 [Veillonella parvula DSM 2008]
gi|282849200|ref|ZP_06258585.1| ribosomal protein S18 [Veillonella parvula ATCC 17745]
gi|294793012|ref|ZP_06758158.1| ribosomal protein S18 [Veillonella sp. 6_1_27]
gi|294794948|ref|ZP_06760083.1| ribosomal protein S18 [Veillonella sp. 3_1_44]
gi|303228727|ref|ZP_07315547.1| ribosomal protein S18 [Veillonella atypica ACS-134-V-Col7a]
gi|303231551|ref|ZP_07318280.1| ribosomal protein S18 [Veillonella atypica ACS-049-V-Sch6]
gi|313893864|ref|ZP_07827430.1| ribosomal protein S18 [Veillonella sp. oral taxon 158 str. F0412]
gi|237863534|gb|EEP64824.1| hypothetical protein VEIDISOL_01886 [Veillonella dispar ATCC
17748]
gi|269094031|gb|ACZ24022.1| ribosomal protein S18 [Veillonella parvula DSM 2008]
gi|282580904|gb|EFB86302.1| ribosomal protein S18 [Veillonella parvula ATCC 17745]
gi|294454310|gb|EFG22684.1| ribosomal protein S18 [Veillonella sp. 3_1_44]
gi|294455957|gb|EFG24321.1| ribosomal protein S18 [Veillonella sp. 6_1_27]
gi|302513797|gb|EFL55810.1| ribosomal protein S18 [Veillonella atypica ACS-049-V-Sch6]
gi|302516601|gb|EFL58523.1| ribosomal protein S18 [Veillonella atypica ACS-134-V-Col7a]
gi|313441428|gb|EFR59854.1| ribosomal protein S18 [Veillonella sp. oral taxon 158 str. F0412]
Length = 76
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +IDYKD+ L RF ++RGKI+P RIS K QR+L +IKRAR + L+
Sbjct: 12 KVCVFCADHIDQIDYKDVAKLRRFTTERGKILPRRISGTCAKHQRKLTTSIKRARAIALL 71
Query: 79 AYV 81
+
Sbjct: 72 PFT 74
>gi|303235604|ref|ZP_07322211.1| ribosomal protein S18 [Prevotella disiens FB035-09AN]
gi|302484051|gb|EFL47039.1| ribosomal protein S18 [Prevotella disiens FB035-09AN]
Length = 90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 31 GIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|225026122|ref|ZP_03715314.1| hypothetical protein EUBHAL_00363 [Eubacterium hallii DSM 3353]
gi|224956559|gb|EEG37768.1| hypothetical protein EUBHAL_00363 [Eubacterium hallii DSM 3353]
Length = 86
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ RR R+K C IDYKD+ L R++S+RGKI+P RI+ K QR L
Sbjct: 11 PMRRRGGRRRKKVCIFCADKNAVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTV 70
Query: 68 AIKRARYLGLIAYV 81
AIKRAR++ L+ Y
Sbjct: 71 AIKRARHVSLMPYT 84
>gi|288801223|ref|ZP_06406678.1| ribosomal protein S18 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331834|gb|EFC70317.1| ribosomal protein S18 [Prevotella sp. oral taxon 299 str. F0039]
Length = 89
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARQIALLPYVT 85
>gi|224282369|ref|ZP_03645691.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
gi|310286813|ref|YP_003938071.1| ribosomal protein S18 [Bifidobacterium bifidum S17]
gi|311063711|ref|YP_003970436.1| 30S ribosomal protein S18P RpsR [Bifidobacterium bifidum PRL2010]
gi|313139513|ref|ZP_07801706.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
gi|309250749|gb|ADO52497.1| ribosomal protein S18 [Bifidobacterium bifidum S17]
gi|310866030|gb|ADP35399.1| RpsR SSU ribosomal protein S18P [Bifidobacterium bifidum PRL2010]
gi|313132023|gb|EFR49640.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
Length = 82
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|261410090|ref|YP_003246331.1| 30S ribosomal protein S18 [Paenibacillus sp. Y412MC10]
gi|315644249|ref|ZP_07897419.1| ribosomal protein S18 [Paenibacillus vortex V453]
gi|329925101|ref|ZP_08280045.1| ribosomal protein S18 [Paenibacillus sp. HGF5]
gi|261286553|gb|ACX68524.1| ribosomal protein S18 [Paenibacillus sp. Y412MC10]
gi|315280624|gb|EFU43913.1| ribosomal protein S18 [Paenibacillus vortex V453]
gi|328940220|gb|EGG36552.1| ribosomal protein S18 [Paenibacillus sp. HGF5]
Length = 90
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIKR+R + L+ Y
Sbjct: 28 CFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRALTIAIKRSRQIALLPY 87
Query: 81 VN 82
Sbjct: 88 TT 89
>gi|157363691|ref|YP_001470458.1| 30S ribosomal protein S18 [Thermotoga lettingae TMO]
gi|205618988|sp|A8F5G0|RS18_THELT RecName: Full=30S ribosomal protein S18
gi|157314295|gb|ABV33394.1| ribosomal protein S18 [Thermotoga lettingae TMO]
Length = 78
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYKD+RLLN FL+ + KI+P R++ K QR + AIKRAR++ L+ ++ L
Sbjct: 26 VDYKDLRLLNEFLTDKAKIIPKRVTGNCAKHQRMIKIAIKRARHMALLPFIKL 78
>gi|307566431|ref|ZP_07628866.1| 30S ribosomal protein S18 [Prevotella amnii CRIS 21A-A]
gi|307344856|gb|EFN90258.1| 30S ribosomal protein S18 [Prevotella amnii CRIS 21A-A]
Length = 89
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 GIKYIDYKDPNFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|322433963|ref|YP_004216175.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX9]
gi|321161690|gb|ADW67395.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX9]
Length = 129
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + I Y+D+RLL F+++RGKIVP R++ V + QR L+ AIK++R +
Sbjct: 62 RKKVCKFCTEKIDAISYRDVRLLQGFVAERGKIVPRRLTGVCTRHQRRLSLAIKQSRNIA 121
Query: 77 LIAY 80
L+A+
Sbjct: 122 LLAF 125
>gi|313202816|ref|YP_004041473.1| SSU ribosomal protein s18p [Paludibacter propionicigenes WB4]
gi|312442132|gb|ADQ78488.1| SSU ribosomal protein S18P [Paludibacter propionicigenes WB4]
Length = 89
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD L +FL+++GKI+P R++ S K QR++A+A+KRAR++ L+ YV
Sbjct: 34 IDYKDPEFLKKFLNEQGKILPRRLTGTSLKFQRKVAQAVKRARHIALLPYVT 85
>gi|124266721|ref|YP_001020725.1| 30S ribosomal protein S18 [Methylibium petroleiphilum PM1]
gi|166220959|sp|A2SG01|RS18_METPP RecName: Full=30S ribosomal protein S18
gi|124259496|gb|ABM94490.1| SSU ribosomal protein S18P [Methylibium petroleiphilum PM1]
Length = 96
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + G IDYKD+ L F+++ GKI P+R++ QR+L+ IKRAR+L
Sbjct: 27 RKRFCRFTVTGVTEIDYKDVDTLRDFIAENGKITPARLTGTRAFFQRQLSTCIKRARFLA 86
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 87 LLPYSD 92
>gi|312898031|ref|ZP_07757437.1| ribosomal protein S18 [Megasphaera micronuciformis F0359]
gi|310620856|gb|EFQ04410.1| ribosomal protein S18 [Megasphaera micronuciformis F0359]
Length = 76
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RF ++RGKI+P R+S V K QR+L AIKRAR + L+
Sbjct: 12 KVCNFCVDHIEEIDYKDTAKLRRFTTERGKILPRRVSGVCAKHQRKLTVAIKRARAIALL 71
Query: 79 AYV 81
Y
Sbjct: 72 PYT 74
>gi|108803692|ref|YP_643629.1| 30S ribosomal protein S18P [Rubrobacter xylanophilus DSM 9941]
gi|122976088|sp|Q1AXR1|RS18_RUBXD RecName: Full=30S ribosomal protein S18
gi|108764935|gb|ABG03817.1| SSU ribosomal protein S18P [Rubrobacter xylanophilus DSM 9941]
Length = 81
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S ++K C + +DYKD +L RF S+RGKI R++ + + QRE A+AIKRAR
Sbjct: 12 SGKKKVCVFCKENIEYVDYKDYNMLRRFTSERGKIRARRVTGLCPQHQRETARAIKRARE 71
Query: 75 LGLIAYV 81
+ L+ Y+
Sbjct: 72 MALLPYI 78
>gi|307244733|ref|ZP_07526835.1| ribosomal protein S18 [Peptostreptococcus stomatis DSM 17678]
gi|306491910|gb|EFM63961.1| ribosomal protein S18 [Peptostreptococcus stomatis DSM 17678]
Length = 75
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +IDYK+++ L +++++RGKI+P RI+ K QRE+ KAIK AR + L+ Y
Sbjct: 13 CQFCADKSTKIDYKNVQKLEKYVTERGKILPRRITGTCAKHQREVTKAIKLARNVALLPY 72
Query: 81 V 81
Sbjct: 73 T 73
>gi|23335650|ref|ZP_00120884.1| COG0238: Ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|23465012|ref|NP_695615.1| 30S ribosomal protein S18 [Bifidobacterium longum NCC2705]
gi|189440079|ref|YP_001955160.1| 30S ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|213691157|ref|YP_002321743.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227545708|ref|ZP_03975757.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622618|ref|ZP_04665649.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|296453411|ref|YP_003660554.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133417|ref|YP_004000756.1| rpsr [Bifidobacterium longum subsp. longum BBMN68]
gi|317482747|ref|ZP_07941759.1| ribosomal protein S18 [Bifidobacterium sp. 12_1_47BFAA]
gi|322688391|ref|YP_004208125.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
157F]
gi|322690411|ref|YP_004219981.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|59798916|sp|Q8G758|RS18_BIFLO RecName: Full=30S ribosomal protein S18
gi|23325614|gb|AAN24251.1| 30S ribosomal protein S18-2 [Bifidobacterium longum NCC2705]
gi|189428514|gb|ACD98662.1| Ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|213522618|gb|ACJ51365.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227213824|gb|EEI81663.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514615|gb|EEQ54482.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291517548|emb|CBK71164.1| SSU ribosomal protein S18P [Bifidobacterium longum subsp. longum
F8]
gi|296182842|gb|ADG99723.1| ribosomal protein S18 [Bifidobacterium longum subsp. longum
JDM301]
gi|311772646|gb|ADQ02134.1| RpsR [Bifidobacterium longum subsp. longum BBMN68]
gi|316915782|gb|EFV37192.1| ribosomal protein S18 [Bifidobacterium sp. 12_1_47BFAA]
gi|320455267|dbj|BAJ65889.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320457215|dbj|BAJ67836.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320459727|dbj|BAJ70347.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
157F]
Length = 82
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|302334831|ref|YP_003800038.1| SSU ribosomal protein S18P [Olsenella uli DSM 7084]
gi|301318671|gb|ADK67158.1| SSU ribosomal protein S18P [Olsenella uli DSM 7084]
Length = 90
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR +
Sbjct: 13 RRKYCQFCKEDVEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIAVAIKRAREMA 72
Query: 77 LIAYV 81
L+ Y
Sbjct: 73 LLPYT 77
>gi|158319096|ref|YP_001511603.1| ribosomal protein S18 [Alkaliphilus oremlandii OhILAs]
gi|205556770|sp|A8MED6|RS18_ALKOO RecName: Full=30S ribosomal protein S18
gi|158139295|gb|ABW17607.1| ribosomal protein S18 [Alkaliphilus oremlandii OhILAs]
Length = 78
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ L +++++RGKI+P RIS QREL +AIKR+R++ L+ Y
Sbjct: 16 CVFCADKSKNIDYKDVHKLKKYITERGKILPRRISGNCAIHQRELTQAIKRSRHIALLPY 75
Query: 81 V 81
Sbjct: 76 T 76
>gi|295133966|ref|YP_003584642.1| 30S ribosomal protein S18 [Zunongwangia profunda SM-A87]
gi|294981981|gb|ADF52446.1| 30S ribosomal protein S18 [Zunongwangia profunda SM-A87]
Length = 99
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S +K C G IDYKD L F++++GK++P R++ S K QR++A
Sbjct: 21 TPL-NIETSKTKKYCRFKRSGIKYIDYKDPDFLMSFVNEQGKLLPRRLTGTSLKYQRKVA 79
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 80 VAVKRARHLALMPYVG 95
>gi|83816823|ref|YP_445490.1| ribosomal protein S18 [Salinibacter ruber DSM 13855]
gi|294507376|ref|YP_003571434.1| 30S ribosomal protein S18 [Salinibacter ruber M8]
gi|123726178|sp|Q2S2U1|RS18_SALRD RecName: Full=30S ribosomal protein S18
gi|83758217|gb|ABC46330.1| ribosomal protein S18 [Salinibacter ruber DSM 13855]
gi|294343704|emb|CBH24482.1| 30S ribosomal protein S18 [Salinibacter ruber M8]
Length = 70
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD L +F++ +GKI+P R++ V + QR++ KAIKRAR+L L+ YV+
Sbjct: 15 VDYKDTEFLEQFINNQGKILPRRVTGVPARVQRQITKAIKRARHLALMPYVS 66
>gi|288926386|ref|ZP_06420308.1| ribosomal protein S18 [Prevotella buccae D17]
gi|315608713|ref|ZP_07883691.1| 30S ribosomal protein S18 [Prevotella buccae ATCC 33574]
gi|288336839|gb|EFC75203.1| ribosomal protein S18 [Prevotella buccae D17]
gi|315249563|gb|EFU29574.1| 30S ribosomal protein S18 [Prevotella buccae ATCC 33574]
Length = 90
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 31 GIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYV 85
>gi|11467816|ref|NP_050867.1| ribosomal protein S18 [Nephroselmis olivacea]
gi|20978742|sp|Q9TKX8|RR18_NEPOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|5880745|gb|AAD54838.1|AF137379_61 ribosomal protein S18 [Nephroselmis olivacea]
Length = 73
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR + + + RIDYK++ LL +FL++ GKI+P R++ ++ K+QR + +AIK+AR
Sbjct: 5 SRRRLAKLANAQIDDRIDYKNVDLLRQFLTEEGKILPRRVTGLTAKQQRGMTRAIKQARI 64
Query: 75 LGLIAYVN 82
+ L+ +++
Sbjct: 65 MALLEFIH 72
>gi|253573878|ref|ZP_04851220.1| ribosomal protein S18 [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846355|gb|EES74361.1| ribosomal protein S18 [Paenibacillus sp. oral taxon 786 str. D14]
Length = 89
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIKR+R + L+ Y
Sbjct: 27 CYFTVNKITHIDYKDTELLKKFISERGKILPRRVTGTSAKYQRLLTIAIKRSRQIALLPY 86
Query: 81 VN 82
Sbjct: 87 TT 88
>gi|291455937|ref|ZP_06595327.1| ribosomal protein S18 [Bifidobacterium breve DSM 20213]
gi|291382346|gb|EFE89864.1| ribosomal protein S18 [Bifidobacterium breve DSM 20213]
Length = 82
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|326802630|ref|YP_004320448.1| ribosomal protein S18 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651036|gb|AEA01219.1| ribosomal protein S18 [Aerococcus urinae ACS-120-V-Col10a]
Length = 79
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD LL+R++S +GKI+P R++ K QR L AIKRAR + L+
Sbjct: 14 KVCFFCANHMDFIDYKDTDLLSRYVSDKGKILPRRVTGTCAKHQRTLTSAIKRARIMALL 73
Query: 79 AYV 81
+
Sbjct: 74 PFT 76
>gi|312879778|ref|ZP_07739578.1| SSU ribosomal protein S18P [Aminomonas paucivorans DSM 12260]
gi|310783069|gb|EFQ23467.1| SSU ribosomal protein S18P [Aminomonas paucivorans DSM 12260]
Length = 80
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C R+DYK+ L +++++RGKIVP R++ K QR+L +AIKRAR L L+
Sbjct: 16 KVCHFCVDKVQRVDYKEFEKLRKYVTERGKIVPRRVTGTCAKHQRQLTRAIKRARILALL 75
Query: 79 AYV 81
+
Sbjct: 76 PFT 78
>gi|220927516|ref|YP_002504425.1| 30S ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|326202835|ref|ZP_08192702.1| ribosomal protein S18 [Clostridium papyrosolvens DSM 2782]
gi|219997844|gb|ACL74445.1| ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|325986912|gb|EGD47741.1| ribosomal protein S18 [Clostridium papyrosolvens DSM 2782]
Length = 97
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C A IDYKD+ + +++S+RGKI+P RIS K QR+L A+KRAR++
Sbjct: 31 KKKVCSFCVDKATDIDYKDVAKIRKYVSERGKILPRRISGNCAKHQRQLTVAVKRARHIA 90
Query: 77 LIAYV 81
L+ Y
Sbjct: 91 LLPYT 95
>gi|332654781|ref|ZP_08420523.1| ribosomal protein S18 [Ruminococcaceae bacterium D16]
gi|332516124|gb|EGJ45732.1| ribosomal protein S18 [Ruminococcaceae bacterium D16]
Length = 79
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C IDYKD L R+ S+RGKI+P R + QR+L +AIKRAR +
Sbjct: 13 RRKVCAFCVDKVECIDYKDAAKLRRYTSERGKILPRRTTGTCAMHQRQLTEAIKRARQVA 72
Query: 77 LIAYVN 82
L+ YV
Sbjct: 73 LLPYVT 78
>gi|172040219|ref|YP_001799933.1| 30S ribosomal protein S18 [Corynebacterium urealyticum DSM 7109]
gi|229559980|sp|B1VFG0|RS18_CORU7 RecName: Full=30S ribosomal protein S18
gi|171851523|emb|CAQ04499.1| 30S ribosomal protein S18 [Corynebacterium urealyticum DSM 7109]
Length = 82
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL +G ++DYK+ LL +F+S RGKI R++ ++ ++QRE+A AIK AR
Sbjct: 14 SRRPKKNPLKAEGIEQVDYKNYALLRKFISDRGKIRSRRVTGLTPQQQREVATAIKNARE 73
Query: 75 LGLIAY 80
+ L+ +
Sbjct: 74 MALLPF 79
>gi|297545636|ref|YP_003677938.1| 30S ribosomal protein S18 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843411|gb|ADH61927.1| ribosomal protein S18 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 89
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYKD+ L +++++RGKI+P RI+ + QR+L +AIKRAR + L+ Y
Sbjct: 27 CAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTRAIKRARQIALLPY 86
Query: 81 V 81
Sbjct: 87 T 87
>gi|237785093|ref|YP_002905798.1| 30S ribosomal protein S18 [Corynebacterium kroppenstedtii DSM
44385]
gi|259494804|sp|C4LHF0|RS18_CORK4 RecName: Full=30S ribosomal protein S18
gi|237758005|gb|ACR17255.1| 30S ribosomal protein S18 [Corynebacterium kroppenstedtii DSM
44385]
Length = 82
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ R K PL +G +DYKDI L F+S+RGKI R++ ++ ++QR++A A+K AR
Sbjct: 14 TRRPKKNPLKARGIEAVDYKDIETLRTFISERGKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAYVN 82
+ L+ + +
Sbjct: 74 MALLPFTS 81
>gi|83589003|ref|YP_429012.1| 30S ribosomal protein S18 [Moorella thermoacetica ATCC 39073]
gi|123753003|sp|Q2RM70|RS18_MOOTA RecName: Full=30S ribosomal protein S18
gi|83571917|gb|ABC18469.1| SSU ribosomal protein S18P [Moorella thermoacetica ATCC 39073]
Length = 75
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C ++DYKD+ L R++S+RGKI+P RIS QR+L +AIKRAR L L+ Y
Sbjct: 13 CSFCVDKIEQVDYKDVNRLRRYISERGKILPRRISGNCAHHQRQLTRAIKRARALALLPY 72
Query: 81 V 81
Sbjct: 73 T 73
>gi|239918783|ref|YP_002958341.1| SSU ribosomal protein S18P [Micrococcus luteus NCTC 2665]
gi|281414991|ref|ZP_06246733.1| 30S ribosomal protein S18 [Micrococcus luteus NCTC 2665]
gi|289706693|ref|ZP_06503041.1| ribosomal protein S18 [Micrococcus luteus SK58]
gi|259494814|sp|C5C7U9|RS18_MICLC RecName: Full=30S ribosomal protein S18
gi|239839990|gb|ACS31787.1| SSU ribosomal protein S18P [Micrococcus luteus NCTC 2665]
gi|289556613|gb|EFD49956.1| ribosomal protein S18 [Micrococcus luteus SK58]
Length = 79
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+A+K AR + L+
Sbjct: 12 KSNPLKAAKITEIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAVKNAREVALL 71
Query: 79 AYVN 82
Y
Sbjct: 72 PYAG 75
>gi|94971562|ref|YP_593610.1| 30S ribosomal protein S18 [Candidatus Koribacter versatilis
Ellin345]
gi|123079320|sp|Q1IHW4|RS18_ACIBL RecName: Full=30S ribosomal protein S18
gi|94553612|gb|ABF43536.1| SSU ribosomal protein S18P [Candidatus Koribacter versatilis
Ellin345]
Length = 123
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + IDYKD+RLL +F+++ GKIVP R++ V QR L+ AIK+
Sbjct: 51 RKFFRRKKVCKFCVEKIDAIDYKDVRLLGQFVAESGKIVPRRLTGVCTPHQRRLSDAIKQ 110
Query: 72 ARYLGLIAYVN 82
AR + L+ + +
Sbjct: 111 ARNIALLPFAS 121
>gi|118579197|ref|YP_900447.1| 30S ribosomal protein S18 [Pelobacter propionicus DSM 2379]
gi|166220968|sp|A1AM19|RS18_PELPD RecName: Full=30S ribosomal protein S18
gi|118501907|gb|ABK98389.1| SSU ribosomal protein S18P [Pelobacter propionicus DSM 2379]
Length = 94
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C + IDYK+ R L F+++RGKIVP RIS QRE+ +AIKRAR L
Sbjct: 23 QRRKVCRFCAEKNLTIDYKEPRTLRYFITERGKIVPRRISGNCSAHQREITEAIKRARNL 82
Query: 76 GLI 78
L+
Sbjct: 83 ALL 85
>gi|18860333|ref|NP_569651.1| ribosomal protein S18 [Psilotum nudum]
gi|20978677|sp|Q8WHZ9|RR18_PSINU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|18389486|dbj|BAB84238.1| ribosomal protein S18 [Psilotum nudum]
Length = 75
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+I LL RF+S+RGKI+ R++ ++ K+QR + +IKRAR L L+ ++N
Sbjct: 21 IDYKNIDLLRRFISERGKILSRRMTKLTSKQQRSVTVSIKRARILALLPFIN 72
>gi|289579513|ref|YP_003478140.1| ribosomal protein S18 [Thermoanaerobacter italicus Ab9]
gi|289529226|gb|ADD03578.1| ribosomal protein S18 [Thermoanaerobacter italicus Ab9]
Length = 89
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYKD+ L +++++RGKI+P RI+ + QR+L +AIKRAR + L+ Y
Sbjct: 27 CAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTRAIKRARQIALLPY 86
Query: 81 V 81
Sbjct: 87 T 87
>gi|54020444|ref|YP_115817.1| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 232]
gi|161611220|ref|YP_279087.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae J]
gi|161611227|ref|YP_287690.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 7448]
gi|59798622|sp|Q600Z8|RS18_MYCH2 RecName: Full=30S ribosomal protein S18
gi|166221070|sp|Q4A872|RS18_MYCH7 RecName: Full=30S ribosomal protein S18
gi|166221071|sp|Q4AA45|RS18_MYCHJ RecName: Full=30S ribosomal protein S18
gi|53987617|gb|AAV27818.1| 30s ribosomal protein S18 [Mycoplasma hyopneumoniae 232]
gi|144227556|gb|AAZ44376.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae J]
gi|144575366|gb|AAZ53667.2| 30s ribosomal protein S18 [Mycoplasma hyopneumoniae 7448]
Length = 87
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKDI +L RF++ GKI PSRI+ K QR+LA A+KRAR++ L+ ++
Sbjct: 24 IDYKDIEVLQRFINTFGKIQPSRITGNCAKHQRKLALAVKRARFVALLPFI 74
>gi|229915459|gb|ACQ90804.1| ribosomal protein S18 [Oocystis solitaria]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL +FL+ GKI+P R+S ++ K+QR ++KAIK AR +G I Y+
Sbjct: 37 IDYKNVVLLRKFLTAEGKILPRRVSGLNAKQQRYMSKAIKNARMIGFIPYI 87
>gi|307683491|dbj|BAJ19724.1| ribosomal protein S18 [Pseudotsuga sinensis var. wilsoniana]
Length = 86
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RRN++ R+ G G RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 8 PKRSFRRNLTPIRRHLSPIGSGD-RIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLM 66
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 67 TNAIKRARILSLLPFL 82
>gi|325291432|ref|YP_004267613.1| SSU ribosomal protein S18P [Syntrophobotulus glycolicus DSM 8271]
gi|324966833|gb|ADY57612.1| SSU ribosomal protein S18P [Syntrophobotulus glycolicus DSM 8271]
Length = 81
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C IDYKD+ L +++++RGKI+P RIS K QRE+ AIKRAR +
Sbjct: 15 RKRVCSFCVDKVTEIDYKDLPKLRKYVTERGKILPRRISGNCAKHQREVTIAIKRARSIA 74
Query: 77 LIAYV 81
L+ YV
Sbjct: 75 LLPYV 79
>gi|121535339|ref|ZP_01667151.1| ribosomal protein S18 [Thermosinus carboxydivorans Nor1]
gi|121306031|gb|EAX46961.1| ribosomal protein S18 [Thermosinus carboxydivorans Nor1]
Length = 76
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C R+DYKD+ L RF+++RGKI+P RIS + QR+L AIKRAR +
Sbjct: 10 KKKVCSFCVDKIERVDYKDVPRLRRFITERGKILPRRISGNCARHQRQLTLAIKRARNMA 69
Query: 77 LIAYV 81
L+ +
Sbjct: 70 LLPFT 74
>gi|238809826|dbj|BAH69616.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 97
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RR+ C + +DYKD+ L++F++ G+I P + K QR++A AIKRAR+
Sbjct: 23 NFRRRRCETCDQKLTYVDYKDVEFLSKFITATGQIKPHSATGACAKDQRKIANAIKRARF 82
Query: 75 LGLIAY 80
+ LI Y
Sbjct: 83 MALIPY 88
>gi|225848304|ref|YP_002728467.1| ribosomal protein S18 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644141|gb|ACN99191.1| ribosomal protein S18 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 76
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSG-KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C K P +YKD+ +L F+S+RG+I+P RIS K QR+L+ IK+AR L
Sbjct: 11 RKKYCKFCAEKKEP--NYKDVEMLKEFISERGRIIPRRISGTCAKHQRKLSVEIKKARQL 68
Query: 76 GLIAYV 81
LI YV
Sbjct: 69 ALIPYV 74
>gi|302546721|ref|ZP_07299063.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|302464339|gb|EFL27432.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
Length = 80
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 9 LLRRNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ RR S RR + PL G +DYK+ LL +F+S RGKI R++ V+ ++QR
Sbjct: 1 MARRATSDRRGAKRPRVNPLDAAGITYVDYKNTDLLRKFISDRGKIRSPRVTHVTRQQQR 60
Query: 64 ELAKAIKRARYLGLIAY 80
++A+AIK AR + L+ Y
Sbjct: 61 QIARAIKNAREMALLPY 77
>gi|291285953|ref|YP_003502769.1| 30S ribosomal protein S18 [Denitrovibrio acetiphilus DSM 12809]
gi|290883113|gb|ADD66813.1| ribosomal protein S18 [Denitrovibrio acetiphilus DSM 12809]
Length = 76
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C + IDYKD++LL +F+++RGKI+P R++ + QR+LA A+K AR +
Sbjct: 9 QRKKVCRFCTETID-IDYKDVKLLRQFVTERGKIMPRRLTGTCARHQRQLATAVKTARII 67
Query: 76 GLIAY 80
L+ +
Sbjct: 68 ALLPF 72
>gi|116672660|ref|YP_833593.1| 30S ribosomal protein S18 [Arthrobacter sp. FB24]
gi|119961039|ref|YP_949830.1| 30S ribosomal protein S18 [Arthrobacter aurescens TC1]
gi|220914622|ref|YP_002489931.1| 30S ribosomal protein S18 [Arthrobacter chlorophenolicus A6]
gi|325965247|ref|YP_004243153.1| 30S ribosomal protein S18P [Arthrobacter phenanthrenivorans
Sphe3]
gi|205556877|sp|A1RC68|RS18_ARTAT RecName: Full=30S ribosomal protein S18
gi|205556887|sp|A0K2H3|RS18_ARTS2 RecName: Full=30S ribosomal protein S18
gi|254765405|sp|B8H839|RS18_ARTCA RecName: Full=30S ribosomal protein S18
gi|116612769|gb|ABK05493.1| SSU ribosomal protein S18P [Arthrobacter sp. FB24]
gi|119947898|gb|ABM06809.1| ribosomal protein S18 [Arthrobacter aurescens TC1]
gi|219861500|gb|ACL41842.1| ribosomal protein S18 [Arthrobacter chlorophenolicus A6]
gi|323471334|gb|ADX75019.1| SSU ribosomal protein S18P [Arthrobacter phenanthrenivorans
Sphe3]
Length = 79
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR + L+
Sbjct: 12 KSNPLKAADITVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAREVALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|300870579|ref|YP_003785450.1| 30S ribosomal protein S18 [Brachyspira pilosicoli 95/1000]
gi|300688278|gb|ADK30949.1| 30S ribosomal protein S18 [Brachyspira pilosicoli 95/1000]
Length = 114
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
EV R ++K C +DYKDI+LL +++ + GKI+P R++ K Q
Sbjct: 33 EVNEKDAASRKKFFKKKICYFCKNNIDVLDYKDIKLLKKYVKESGKIIPKRLNGTCSKHQ 92
Query: 63 RELAKAIKRARYLGLIAY 80
R + KAIKRAR + L+ Y
Sbjct: 93 RLVTKAIKRARNIALLPY 110
>gi|329935150|ref|ZP_08285141.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
gi|329305219|gb|EGG49077.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
Length = 78
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ + + PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A A+K AR
Sbjct: 9 LARKNRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVNRQQQRQIATAVKNAR 68
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 69 EMALLPY 75
>gi|291521978|emb|CBK80271.1| SSU ribosomal protein S18P [Coprococcus catus GD/7]
Length = 87
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD L R++S+RGKI+P RI+ K QR+L AIKRAR++ L+ Y+
Sbjct: 35 IDYKDTNKLKRYISERGKILPRRITGNCAKHQRKLTTAIKRARHIALMPYI 85
>gi|163842243|ref|YP_001626648.1| 30S ribosomal protein S18 [Renibacterium salmoninarum ATCC 33209]
gi|205616911|sp|A9WVL3|RS18_RENSM RecName: Full=30S ribosomal protein S18
gi|162955719|gb|ABY25234.1| SSU ribosomal protein S18P [Renibacterium salmoninarum ATCC
33209]
Length = 79
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR + L+
Sbjct: 12 KSNPLKAADITVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAREVALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|290487260|gb|ADD30014.1| ribosomal protein S18 [Bulnesia arborea]
Length = 105
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ LLNRFLS++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNLSLLNRFLSEQGKILSRRVNRLTLKQQRLVTIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFMN 79
>gi|217076742|ref|YP_002334458.1| ribosomal protein S18 [Thermosipho africanus TCF52B]
gi|217036595|gb|ACJ75117.1| ribosomal protein S18 [Thermosipho africanus TCF52B]
Length = 74
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C L +DYKDI+LL FL+++ KI+P RI+ K QR + AIKRAR + L+
Sbjct: 10 KVCKLCQSKVEYVDYKDIKLLREFLTEKEKIIPRRITGNCAKHQRMVKIAIKRARQMALL 69
Query: 79 AYVN 82
YV
Sbjct: 70 PYVK 73
>gi|294102403|ref|YP_003554261.1| ribosomal protein S18 [Aminobacterium colombiense DSM 12261]
gi|293617383|gb|ADE57537.1| ribosomal protein S18 [Aminobacterium colombiense DSM 12261]
Length = 87
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R K C +DYKD+ L +++S+RGKI+P R++ K QR+L AIK
Sbjct: 15 RRGGKRRPKVCFYCVDKIDYVDYKDVERLRKYISERGKIMPRRVTGNCAKHQRQLTTAIK 74
Query: 71 RARYLGLIAY 80
RAR++ L+ Y
Sbjct: 75 RARFMALLPY 84
>gi|227824505|ref|ZP_03989337.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
gi|226905004|gb|EEH90922.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
Length = 79
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L +F+++RGKI+P RI+ K QR+L AIKRAR + L+
Sbjct: 15 KVCSFCVDKVEEIDYKDVAKLRKFITERGKILPRRITGTCAKHQRQLTIAIKRARNVALL 74
Query: 79 AY 80
+
Sbjct: 75 PF 76
>gi|148269458|ref|YP_001243918.1| 30S ribosomal protein S18 [Thermotoga petrophila RKU-1]
gi|281411824|ref|YP_003345903.1| ribosomal protein S18 [Thermotoga naphthophila RKU-10]
gi|166222254|sp|A5IJG9|RS18_THEP1 RecName: Full=30S ribosomal protein S18
gi|147735002|gb|ABQ46342.1| SSU ribosomal protein S18P [Thermotoga petrophila RKU-1]
gi|281372927|gb|ADA66489.1| ribosomal protein S18 [Thermotoga naphthophila RKU-10]
Length = 75
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+ +
Sbjct: 23 VDYKDTRLLSEFLTDKGKIIPKRLTGNCSKHQRMVKVAIKRARQMGLLPYLKI 75
>gi|297154862|gb|ADI04574.1| 30S ribosomal protein S18 [Streptomyces bingchenggensis BCW-1]
Length = 80
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
RR+ + RR S PL G +DYK+ LL +F+S RGKI R++ V+ ++QR++
Sbjct: 3 RRSTTDRRTSKRPRVNPLDAAGITYVDYKNTDLLRKFISDRGKIRSRRVTHVTRQQQRQI 62
Query: 66 AKAIKRARYLGLIAY 80
++AIK AR + L+ Y
Sbjct: 63 SRAIKNAREMALLPY 77
>gi|300087857|ref|YP_003758379.1| 30S ribosomal protein S18 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527590|gb|ADJ26058.1| ribosomal protein S18 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 153
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C IDYKD L+R++S+RGKI P R S K QR LA AIK+AR +
Sbjct: 27 RRKVCAFCADKNLVIDYKDTARLSRYISERGKINPRRRSGTCAKHQRALANAIKQARMIA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|167754091|ref|ZP_02426218.1| hypothetical protein ALIPUT_02379 [Alistipes putredinis DSM
17216]
gi|167658716|gb|EDS02846.1| hypothetical protein ALIPUT_02379 [Alistipes putredinis DSM
17216]
Length = 92
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIKYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFV 87
>gi|323149196|ref|YP_004222025.1| ribosomal protein S18 [Coccomyxa sp. C-169]
gi|317467252|gb|ADV29873.1| ribosomal protein S18 [Coccomyxa sp. C-169]
Length = 95
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++S P S IDYK+I LL +F++ GKI+P R S ++ K+QR +A+AIK AR +G
Sbjct: 23 QKRSRPKSPTFQGTIDYKNIVLLRKFITAEGKILPRRSSLLTAKQQRYMARAIKNARIMG 82
Query: 77 LIAYVN 82
L+ ++N
Sbjct: 83 LLPFIN 88
>gi|268609247|ref|ZP_06142974.1| 30S ribosomal protein S18 [Ruminococcus flavefaciens FD-1]
Length = 80
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C RIDYKD+ L + +++R KI+P R++ QREL AIKRAR++
Sbjct: 14 RKKVCMFCADRIERIDYKDLAKLRKCMTERAKILPRRVTGTCAFHQRELTVAIKRARHIA 73
Query: 77 LIAYVN 82
L+ Y++
Sbjct: 74 LLPYIS 79
>gi|294340686|emb|CAZ89078.1| putative 30S ribosomal protein S18 RpsR [Thiomonas sp. 3As]
Length = 96
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ C + +IDYKD+ +L +++ +I+P+R++ S QR+L AIKRAR+L
Sbjct: 27 RKRFCRFTVAKVEQIDYKDVDVLKDLIAENARIIPARLTGTSAHYQRQLNTAIKRARFLA 86
Query: 77 LIAYVNL 83
L+ Y +L
Sbjct: 87 LLPYTDL 93
>gi|308189828|ref|YP_003922759.1| 30S ribosomal protein S18 [Mycoplasma fermentans JER]
gi|319777043|ref|YP_004136694.1| 30S ribosomal protein s18 [Mycoplasma fermentans M64]
gi|307624570|gb|ADN68875.1| 30S ribosomal protein S18 [Mycoplasma fermentans JER]
gi|318038118|gb|ADV34317.1| 30S ribosomal protein S18 [Mycoplasma fermentans M64]
Length = 84
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RR+ C + +DYKD+ L++F++ G+I P + K QR++A AIKRAR+
Sbjct: 10 NFRRRRCETCDQKLTYVDYKDVEFLSKFITATGQIKPHSATGACAKDQRKIANAIKRARF 69
Query: 75 LGLIAY 80
+ LI Y
Sbjct: 70 MALIPY 75
>gi|126701289|ref|YP_001090186.1| 30S ribosomal protein S18 [Clostridium difficile 630]
gi|254977322|ref|ZP_05273794.1| 30S ribosomal protein S18 [Clostridium difficile QCD-66c26]
gi|255094653|ref|ZP_05324131.1| 30S ribosomal protein S18 [Clostridium difficile CIP 107932]
gi|255102879|ref|ZP_05331856.1| 30S ribosomal protein S18 [Clostridium difficile QCD-63q42]
gi|255308699|ref|ZP_05352870.1| 30S ribosomal protein S18 [Clostridium difficile ATCC 43255]
gi|255316406|ref|ZP_05357989.1| 30S ribosomal protein S18 [Clostridium difficile QCD-76w55]
gi|255519065|ref|ZP_05386741.1| 30S ribosomal protein S18 [Clostridium difficile QCD-97b34]
gi|255652249|ref|ZP_05399151.1| 30S ribosomal protein S18 [Clostridium difficile QCD-37x79]
gi|255657618|ref|ZP_05403027.1| 30S ribosomal protein S18 [Clostridium difficile QCD-23m63]
gi|260685203|ref|YP_003216488.1| 30S ribosomal protein S18 [Clostridium difficile CD196]
gi|260688862|ref|YP_003219996.1| 30S ribosomal protein S18 [Clostridium difficile R20291]
gi|296452701|ref|ZP_06894392.1| 30S ribosomal protein S18 [Clostridium difficile NAP08]
gi|296880045|ref|ZP_06904015.1| 30S ribosomal protein S18 [Clostridium difficile NAP07]
gi|306521964|ref|ZP_07408311.1| 30S ribosomal protein S18 [Clostridium difficile QCD-32g58]
gi|122973570|sp|Q181R4|RS18_CLOD6 RecName: Full=30S ribosomal protein S18
gi|115252726|emb|CAJ70570.1| 30S ribosomal protein S18 [Clostridium difficile]
gi|260211366|emb|CBA67007.1| 30S ribosomal protein S18 [Clostridium difficile CD196]
gi|260214879|emb|CBE07674.1| 30S ribosomal protein S18 [Clostridium difficile R20291]
gi|296258483|gb|EFH05387.1| 30S ribosomal protein S18 [Clostridium difficile NAP08]
gi|296429022|gb|EFH14899.1| 30S ribosomal protein S18 [Clostridium difficile NAP07]
Length = 75
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYK + L +++++RGKI+P RIS K QREL AIKRAR + L+ Y
Sbjct: 13 CQFCADKNAKIDYKSTQRLQKYITERGKILPRRISGTCAKHQRELTVAIKRARNIALLPY 72
Query: 81 V 81
Sbjct: 73 T 73
>gi|320109096|ref|YP_004184686.1| 30S ribosomal protein S18 [Terriglobus saanensis SP1PR4]
gi|319927617|gb|ADV84692.1| ribosomal protein S18 [Terriglobus saanensis SP1PR4]
Length = 127
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + +I Y+D+RLL F+++RGKIVP R++ V QR+L+ AIK+
Sbjct: 55 RKFFRRKKVCKFCVEKIDQISYRDVRLLQGFVAERGKIVPRRLTGVCTTHQRQLSLAIKQ 114
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 115 ARNIALLPFA 124
>gi|46200044|ref|YP_005711.1| 30S ribosomal protein S18 [Thermus thermophilus HB27]
gi|55980212|ref|YP_143509.1| 30S ribosomal protein S18 [Thermus thermophilus HB8]
gi|50401372|sp|P62659|RS18_THET2 RecName: Full=30S ribosomal protein S18
gi|62900938|sp|Q5SLQ0|RS18_THET8 RecName: Full=30S ribosomal protein S18
gi|116668214|pdb|2J00|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of
4). This File Contains The 30s Subunit, Mrna, A-, P-
And E-Site Trnas And Paromomycin For Molecule I.
gi|116668275|pdb|2J02|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|149242725|pdb|2OW8|SS Chain s, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243635|pdb|2UU9|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243662|pdb|2UUA|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243689|pdb|2UUB|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243716|pdb|2UUC|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243855|pdb|2UXC|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Ucgu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836425|pdb|2UXB|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Gggu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836502|pdb|2V46|R Chain R, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836558|pdb|2V48|R Chain R, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430917|pdb|2UXD|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Cggg In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|160285956|pdb|2QNH|SS Chain s, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|209156513|pdb|3D5A|R Chain R, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156569|pdb|3D5C|R Chain R, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938836|pdb|2JL5|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4).
This File Contains The 30s Subunit.
gi|211938894|pdb|2JL7|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4).
This File Contains The 30s Subunit.
gi|218766790|pdb|3F1E|R Chain R, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766846|pdb|3F1G|R Chain R, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887391|pdb|2WDG|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887416|pdb|2WDH|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887505|pdb|2WDK|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887562|pdb|2WDM|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823546|pdb|2WH1|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome
gi|237823605|pdb|2WH3|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome). This File
Contains The 30s Subunit.
gi|260100003|pdb|3HUW|R Chain R, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule I.
gi|260100059|pdb|3HUY|R Chain R, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule Ii.
gi|261824501|pdb|2WRI|R Chain R, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of
4).
gi|261824563|pdb|2WRK|R Chain R, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of
4).
gi|261824625|pdb|2WRN|R Chain R, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824684|pdb|2WRQ|R Chain R, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307184|pdb|3KIQ|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307242|pdb|3KIS|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307300|pdb|3KIU|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307358|pdb|3KIX|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965621|pdb|3KNH|R Chain R, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526699|pdb|3KNJ|R Chain R, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii'
gi|289526724|pdb|3KNL|R Chain R, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526749|pdb|3KNN|R Chain R, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979521|pdb|3I8G|U Chain U, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979546|pdb|3I8H|U Chain U, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979605|pdb|3I9B|U Chain U, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule
B. The 50s Subunit Can Be Found In Pdb Entry 3i9c.
Molecule A In The S Asymmetric Unit Is Deposited As
3i9d (30s) And 3i9e (50s)
gi|294979659|pdb|3I9D|U Chain U, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule
A. The 50s Subunit Can Be Found In Pdb Entry 3i9e.
Molecule B In The S Asymmetric Unit Is Deposited As
3i9b (30s) And 3i9c (50s)
gi|295982092|pdb|2X9R|R Chain R, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982151|pdb|2X9T|R Chain R, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567979|pdb|2XFZ|R Chain R, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568037|pdb|2XG1|R Chain R, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|309320252|pdb|3OGE|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320273|pdb|3OGY|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320354|pdb|3OHC|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320375|pdb|3OHD|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320456|pdb|3OHY|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320507|pdb|3OI0|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320558|pdb|3OI2|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320609|pdb|3OI4|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207690|pdb|2XQD|R Chain R, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
70s Ribosome With A Gtp Analog
gi|313754016|pdb|2XSY|R Chain R, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754131|pdb|2XUY|R Chain R, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533419|pdb|2Y0U|R Chain R, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533478|pdb|2Y0W|R Chain R, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533537|pdb|2Y0Y|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533596|pdb|2Y10|R Chain R, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533655|pdb|2Y12|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533714|pdb|2Y14|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533773|pdb|2Y16|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533832|pdb|2Y18|R Chain R, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|46197672|gb|AAS82084.1| SSU ribosomal protein S18P [Thermus thermophilus HB27]
gi|55771625|dbj|BAD70066.1| 30S ribosomal protein S18 [Thermus thermophilus HB8]
Length = 88
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 33 DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE 83
>gi|15643371|ref|NP_228415.1| 30S ribosomal protein S18 [Thermotoga maritima MSB8]
gi|7388156|sp|Q9WZ74|RS18_THEMA RecName: Full=30S ribosomal protein S18
gi|4981125|gb|AAD35690.1|AE001735_3 ribosomal protein S18 [Thermotoga maritima MSB8]
Length = 75
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+ +
Sbjct: 23 VDYKDTRLLSEFLTDKGKIIPKRLTGNCSKHQRMVKVAIKRARQMGLLPYLKI 75
>gi|291515311|emb|CBK64521.1| SSU ribosomal protein S18P [Alistipes shahii WAL 8301]
Length = 92
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIKYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFVT 88
>gi|222099030|ref|YP_002533598.1| 30S ribosomal protein S18 [Thermotoga neapolitana DSM 4359]
gi|221571421|gb|ACM22233.1| 30S ribosomal protein S18 [Thermotoga neapolitana DSM 4359]
Length = 78
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYKD +LL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+ +
Sbjct: 26 VDYKDTKLLSDFLTDKGKIIPKRLTGTCAKHQRMVKVAIKRARQMGLLPYLKI 78
>gi|168187295|ref|ZP_02621930.1| ribosomal protein S18 [Clostridium botulinum C str. Eklund]
gi|169294783|gb|EDS76916.1| ribosomal protein S18 [Clostridium botulinum C str. Eklund]
Length = 78
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ L +++++RGKI+P RIS K QREL AIKRAR + L+ +
Sbjct: 16 CAFCADKSSSIDYKDVNKLRKYVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLPF 75
Query: 81 V 81
Sbjct: 76 T 76
>gi|154498399|ref|ZP_02036777.1| hypothetical protein BACCAP_02388 [Bacteroides capillosus ATCC
29799]
gi|150272467|gb|EDM99652.1| hypothetical protein BACCAP_02388 [Bacteroides capillosus ATCC
29799]
Length = 79
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RFLS+R KI+P R + QR+L +AIKRAR + L+
Sbjct: 15 KVCTFCVDKVEHIDYKDAVKLRRFLSERSKILPRRTTGTCAMHQRQLTEAIKRARQIALL 74
Query: 79 AYVN 82
YV
Sbjct: 75 PYVT 78
>gi|118444188|ref|YP_876991.1| 30S ribosomal protein S18 [Clostridium novyi NT]
gi|166220947|sp|A0PX89|RS18_CLONN RecName: Full=30S ribosomal protein S18
gi|118134644|gb|ABK61688.1| ribosomal protein S18 [Clostridium novyi NT]
Length = 78
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD+ L +++++RGKI+P RIS K QREL AIKRAR + L+ +
Sbjct: 16 CAFCADKSSSIDYKDVNKLRKYVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLPF 75
Query: 81 V 81
Sbjct: 76 T 76
>gi|308071625|ref|YP_003873230.1| 30S ribosomal protein S18 [Paenibacillus polymyxa E681]
gi|310644855|ref|YP_003949614.1| 30S ribosomal protein s18 [Paenibacillus polymyxa SC2]
gi|305860904|gb|ADM72692.1| 30S ribosomal protein S18 [Paenibacillus polymyxa E681]
gi|309249806|gb|ADO59373.1| 30S ribosomal protein S18 [Paenibacillus polymyxa SC2]
Length = 90
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD LL +F+S+RGKI+P R++ S K QR L A+KR+R + L+ Y
Sbjct: 28 CFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRMLTIAVKRSRQIALLPY 87
Query: 81 VN 82
Sbjct: 88 TT 89
>gi|295137025|ref|YP_003587572.1| ribosomal protein S18 [Pisum sativum]
gi|293338597|gb|ADE43570.1| ribosomal protein S18 [Pisum sativum]
Length = 110
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+S PL G RIDYK++ LL +F+S++GKI+ R++ ++ K+QR + AIK+AR L L
Sbjct: 16 RRSSPLIQSG-DRIDYKNLSLLFKFISRQGKILSRRVNKLTLKQQRLITIAIKQARILSL 74
Query: 78 IAYVN 82
I +VN
Sbjct: 75 IPFVN 79
>gi|116750608|ref|YP_847295.1| 30S ribosomal protein S18 [Syntrophobacter fumaroxidans MPOB]
gi|205618953|sp|A0LN58|RS18_SYNFM RecName: Full=30S ribosomal protein S18
gi|116699672|gb|ABK18860.1| SSU ribosomal protein S18P [Syntrophobacter fumaroxidans MPOB]
Length = 81
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +IDYKD + L F+++RGKIVP RIS K QREL A+KRAR + L+
Sbjct: 14 KVCRFCVDSELKIDYKDSKTLRYFVTERGKIVPRRISGNCAKHQRELTLAVKRARQIALL 73
Query: 79 AYVNL 83
+ +
Sbjct: 74 PHTTI 78
>gi|303242466|ref|ZP_07328947.1| ribosomal protein S18 [Acetivibrio cellulolyticus CD2]
gi|302589990|gb|EFL59757.1| ribosomal protein S18 [Acetivibrio cellulolyticus CD2]
Length = 95
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKD+ L +++S+RGKI+P RIS K QR++ A+KRAR++
Sbjct: 29 KKKICAFCVDKVTDIDYKDVSKLKKYVSERGKILPRRISGNCAKHQRQMTVAVKRARHIA 88
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 89 LLPYTS 94
>gi|269958121|ref|YP_003327910.1| 30S ribosomal protein S18 [Xylanimonas cellulosilytica DSM 15894]
gi|269306802|gb|ACZ32352.1| ribosomal protein S18 [Xylanimonas cellulosilytica DSM 15894]
Length = 78
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
S PL +DYKD LL +F+S RGKI R++ VS ++QR++AKA+K AR + L+
Sbjct: 13 SNPLKTAKIESVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAVKNAREMALLP 72
Query: 80 Y 80
Y
Sbjct: 73 Y 73
>gi|269797041|ref|YP_003316496.1| 30S ribosomal protein S18P [Sanguibacter keddieii DSM 10542]
gi|269099226|gb|ACZ23662.1| SSU ribosomal protein S18P [Sanguibacter keddieii DSM 10542]
Length = 78
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
S PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR + L+
Sbjct: 13 SNPLKSAKIETVDYKDTALLRKFISDRGKIRARRVTGVSTQEQRQIARAVKNAREMALLP 72
Query: 80 Y 80
Y
Sbjct: 73 Y 73
>gi|229817075|ref|ZP_04447357.1| hypothetical protein BIFANG_02330 [Bifidobacterium angulatum DSM
20098]
gi|229784864|gb|EEP20978.1| hypothetical protein BIFANG_02330 [Bifidobacterium angulatum DSM
20098]
Length = 82
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QRE++KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPYAT 79
>gi|120435464|ref|YP_861150.1| 30S ribosomal protein S18 [Gramella forsetii KT0803]
gi|205558459|sp|A0M0D8|RS18_GRAFK RecName: Full=30S ribosomal protein S18
gi|117577614|emb|CAL66083.1| 30S ribosomal protein S18 [Gramella forsetii KT0803]
Length = 99
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + +K C G IDYKD L F++++GK++P R++ S K QR++A
Sbjct: 21 TPL-NIETTKAKKYCRFKRSGIKYIDYKDPDFLMGFVNEQGKLLPRRLTGTSLKFQRKVA 79
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 80 TAVKRARHLALMPYVG 95
>gi|323141489|ref|ZP_08076378.1| ribosomal protein S18 [Phascolarctobacterium sp. YIT 12067]
gi|322414069|gb|EFY04899.1| ribosomal protein S18 [Phascolarctobacterium sp. YIT 12067]
Length = 76
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L R++++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 12 KVCSFCVDKVEEIDYKDANKLKRYITERGKILPRRISGTCAKHQRQLTVAIKRARCVALL 71
Query: 79 AYV 81
+
Sbjct: 72 PFT 74
>gi|227487780|ref|ZP_03918096.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227542421|ref|ZP_03972470.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092282|gb|EEI27594.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181619|gb|EEI62591.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 82
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKD+ L +F+S RGKI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAAGIEKVDYKDLNTLRQFISDRGKIRSRRVTGLTPRQQRQVATAVKNARE 73
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 74 MALLPFT 80
>gi|20095236|sp|P80382|RS18_THETH RecName: Full=30S ribosomal protein S18
gi|10120581|pdb|1FKA|R Chain R, Structure Of Functionally Activated Small Ribosomal
Subunit At 3.3 A Resolution
gi|10835602|pdb|1FJG|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|11514244|pdb|1G1X|C Chain C, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|11514249|pdb|1G1X|H Chain H, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|13096411|pdb|1HR0|R Chain R, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399809|pdb|1HNW|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399831|pdb|1HNX|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399853|pdb|1HNZ|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278027|pdb|1GIX|U Chain U, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278073|pdb|1IBK|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278094|pdb|1IBL|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278118|pdb|1IBM|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826137|pdb|1JGO|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgo, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826162|pdb|1JGP|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgp, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826187|pdb|1JGQ|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgq, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|20663903|pdb|1J5E|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065893|pdb|1N32|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065920|pdb|1N33|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065947|pdb|1N34|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065973|pdb|1N36|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position
gi|28373716|pdb|1ML5|U Chain U, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177417|pdb|1XMO|R Chain R, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177440|pdb|1XMQ|R Chain R, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To
The Decoding Center
gi|58177481|pdb|1XNQ|R Chain R, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177504|pdb|1XNR|R Chain R, Crystal Structure Of An Inosine-Cytosine Wobble Base
Pair In The Context Of The Decoding Center
gi|66361071|pdb|1YL4|U Chain U, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192253|pdb|2B64|R Chain R, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf1 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Subunit, Trnas,
Mrna And Release Factor Rf1 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf1 And Is Described In Remark 400.
gi|88192316|pdb|2B9M|R Chain R, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf2 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Ribosomal Subunit,
Trnas, Mrna And Release Factor Rf2 From A Crystal
Structure Of The Whole Ribosomal Complex". The Entire
Crystal Structure Contains One 70s Ribosome, Trnas,
Mrna And Release Factor Rf2 And Is Described In Remark
400.
gi|88192372|pdb|2B9O|R Chain R, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s
Subunit, Trnas And Mrna From A Crystal Structure Of The
Whole Ribosomal Complex With A Stop Codon In The A-Site
And Is Described In Remark 400.
gi|110591340|pdb|2F4V|R Chain R, 30s Ribosome + Designer Antibiotic
gi|116667671|pdb|2HHH|R Chain R, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|119389729|pdb|2HGI|U Chain U, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
P Codons. This Entry 2hgi Contains 30s Ribosomal
Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb
Entry 2hgj.
gi|119389786|pdb|2HGP|U Chain U, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome With Translocated And Rotated Shine-Dalgarno
Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
2hgq.
gi|119389842|pdb|2HGR|U Chain U, 70s T.Th. Ribosome Functional Complex With Mrna And E-
And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|186972866|pdb|2VQE|R Chain R, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972889|pdb|2VQF|R Chain R, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|307776629|pdb|3OTO|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From A
Ksga Mutant Of Thermus Thermophilus (Hb8)
gi|6739549|gb|AAF27297.1|AF146075_3 ribosomal protein S18 [Thermus thermophilus]
Length = 88
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 33 DYRNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTE 83
>gi|312621642|ref|YP_004023255.1| 30S ribosomal protein S18 [Caldicellulosiruptor kronotskyensis
2002]
gi|312202109|gb|ADQ45436.1| ribosomal protein S18 [Caldicellulosiruptor kronotskyensis 2002]
Length = 92
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|14278547|pdb|1I94|R Chain R, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278568|pdb|1I95|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278589|pdb|1I96|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278611|pdb|1I97|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241292|pdb|2E5L|R Chain R, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna
Via The Shine- Dalgarno Interaction
gi|226887646|pdb|2ZM6|R Chain R, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 87
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 32 DYRNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTE 82
>gi|197294134|ref|YP_002149755.1| ribosomal protein S18 [Cicer arietinum]
gi|197089822|gb|ACH41092.1| ribosomal protein S18 [Cicer arietinum]
Length = 108
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR P+ + RIDYK++ LL RF+SQ+GKI+ R++ +S K+QR + A
Sbjct: 8 FLKSKQSFRRSLSPI--QSGDRIDYKNMSLLYRFISQQGKILSRRVNRLSLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ + N
Sbjct: 66 IKQARILSLLPFAN 79
>gi|86142229|ref|ZP_01060739.1| ribosomal protein S18 [Leeuwenhoekiella blandensis MED217]
gi|85830981|gb|EAQ49438.1| ribosomal protein S18 [Leeuwenhoekiella blandensis MED217]
Length = 99
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S +K C G +DYKD L F++++GK++P R++ S K QR+++
Sbjct: 21 TPL-NIETSKTKKYCRFKRSGIKYVDYKDADWLASFVNEQGKLLPRRLTGTSLKYQRKVS 79
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 80 VAVKRARHLALMPYVT 95
>gi|119026499|ref|YP_910344.1| 30S ribosomal protein S18 [Bifidobacterium adolescentis ATCC
15703]
gi|154488158|ref|ZP_02029275.1| hypothetical protein BIFADO_01730 [Bifidobacterium adolescentis
L2-32]
gi|166220925|sp|A1A3H9|RS18_BIFAA RecName: Full=30S ribosomal protein S18
gi|118766083|dbj|BAF40262.1| 30S ribosomal protein S18 [Bifidobacterium adolescentis ATCC
15703]
gi|154083631|gb|EDN82676.1| hypothetical protein BIFADO_01730 [Bifidobacterium adolescentis
L2-32]
Length = 82
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QRE++KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPYAT 79
>gi|312135777|ref|YP_004003115.1| 30S ribosomal protein S18 [Caldicellulosiruptor owensensis OL]
gi|311775828|gb|ADQ05315.1| ribosomal protein S18 [Caldicellulosiruptor owensensis OL]
Length = 92
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKILPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|297201377|ref|ZP_06918774.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|297147875|gb|EDY57819.2| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
Length = 77
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G +DYK+ LL +F+S RGKI R++ VS ++QR+LA+A+K AR + L+ Y
Sbjct: 16 PLDAAGITYVDYKETDLLRKFVSDRGKIRSRRVTRVSAQQQRQLARAVKNAREMALLPY 74
>gi|227874245|ref|ZP_03992444.1| possible ribosomal protein S18 [Oribacterium sinus F0268]
gi|227839914|gb|EEJ50345.1| possible ribosomal protein S18 [Oribacterium sinus F0268]
Length = 90
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G +DYKD+ L +++S+RGKI+P RI+ QR + AIKRAR++
Sbjct: 24 RKKVCGFCGDKVKPVDYKDVGTLRKYISERGKILPRRITGSCALHQRAITTAIKRARHIA 83
Query: 77 LIAY 80
L+ Y
Sbjct: 84 LLPY 87
>gi|34811546|pdb|1PNS|R Chain R, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811602|pdb|1PNX|R Chain R, Crystal Structure Of The Wild Type Ribosome From E.
Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx,
Contains Only Molecules Of The 30s Ribosomal Subunit.
The 50s Subunit Is In The Pdb File 1pny.
gi|56966340|pdb|1VOQ|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966393|pdb|1VOS|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966446|pdb|1VOV|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966499|pdb|1VOX|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966552|pdb|1VOZ|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|67464181|pdb|1X18|H Chain H, Contact Sites Of Era Gtpase On The Thermus Thermophilus
30s Subunit
Length = 73
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 18 DYRNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTE 68
>gi|77919594|ref|YP_357409.1| 30S ribosomal protein S18 [Pelobacter carbinolicus DSM 2380]
gi|123756603|sp|Q3A318|RS18_PELCD RecName: Full=30S ribosomal protein S18
gi|77545677|gb|ABA89239.1| SSU ribosomal protein S18P [Pelobacter carbinolicus DSM 2380]
Length = 91
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +IDYK+IR L F+++RGKIVP RIS + QR++ +AIKRAR + L+
Sbjct: 23 KGCRFCADNTLKIDYKEIRNLRYFITERGKIVPRRISGNCAEHQRKIREAIKRARNIALL 82
Query: 79 AYV 81
+
Sbjct: 83 PFT 85
>gi|308179152|ref|YP_003918558.1| 30S ribosomal protein S18 [Arthrobacter arilaitensis Re117]
gi|307746615|emb|CBT77587.1| 30S ribosomal protein S18 [Arthrobacter arilaitensis Re117]
Length = 79
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KS PL IDYKD LL +F+S RGKI R++ VS ++QR++A+AIK AR + L+
Sbjct: 12 KSNPLKAADITVIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRKIAQAIKNAREVALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|152968280|ref|YP_001364064.1| 30S ribosomal protein S18 [Kineococcus radiotolerans SRS30216]
gi|205558177|sp|A6WG61|RS18_KINRD RecName: Full=30S ribosomal protein S18
gi|151362797|gb|ABS05800.1| ribosomal protein S18 [Kineococcus radiotolerans SRS30216]
Length = 78
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++AKAIK AR + L+ Y
Sbjct: 15 PLKAAKIEAVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAIKNAREMALLPY 73
>gi|224178092|ref|YP_002600903.1| ribosomal protein S18 [Pyramimonas parkeae]
gi|215882759|gb|ACJ71132.1| ribosomal protein S18 [Pyramimonas parkeae]
Length = 68
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 43/57 (75%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K IDYK+I LL +F++++GKI+P R++ ++ K+QR + KAIK+AR +G + +VN
Sbjct: 9 KSGELIDYKNIDLLRKFVTEQGKILPRRVTRLNAKQQRLVTKAIKQARVIGSLPFVN 65
>gi|297572323|ref|YP_003698097.1| ribosomal protein S18 [Arcanobacterium haemolyticum DSM 20595]
gi|296932670|gb|ADH93478.1| ribosomal protein S18 [Arcanobacterium haemolyticum DSM 20595]
Length = 78
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+LR+ ++KS PL +DYKD L +F+S RGKI R++ V+ ++QR++A+
Sbjct: 4 PVLRK---PKKKSNPLKAAKIEVVDYKDTATLRKFISDRGKIRSRRVTGVTVQEQRQIAR 60
Query: 68 AIKRARYLGLIAYVN 82
A+K AR + L+ Y +
Sbjct: 61 AVKNAREMALLPYTS 75
>gi|260881441|ref|ZP_05404417.2| ribosomal protein S18 [Mitsuokella multacida DSM 20544]
gi|260848791|gb|EEX68798.1| ribosomal protein S18 [Mitsuokella multacida DSM 20544]
Length = 77
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCSFCVDKVDHIDYKDVAKLRRFVTERGKILPRRISGNCAKHQRQVTVAIKRARNIALL 72
Query: 79 AY 80
+
Sbjct: 73 PF 74
>gi|167750475|ref|ZP_02422602.1| hypothetical protein EUBSIR_01451 [Eubacterium siraeum DSM 15702]
gi|167656626|gb|EDS00756.1| hypothetical protein EUBSIR_01451 [Eubacterium siraeum DSM 15702]
gi|291530826|emb|CBK96411.1| SSU ribosomal protein S18P [Eubacterium siraeum 70/3]
gi|291557667|emb|CBL34784.1| SSU ribosomal protein S18P [Eubacterium siraeum V10Sc8a]
Length = 99
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C A IDYKD+ L + +++R KI+P R++ QREL AIK+AR +
Sbjct: 33 RKKVCAFCADRAEFIDYKDVAKLRKCMTERYKILPRRVTGCCAYHQRELTTAIKKARQVA 92
Query: 77 LIAYVN 82
LI YV+
Sbjct: 93 LIPYVS 98
>gi|295394868|ref|ZP_06805081.1| 30S ribosomal protein S18 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972201|gb|EFG48063.1| 30S ribosomal protein S18 [Brevibacterium mcbrellneri ATCC 49030]
Length = 99
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P +R+ + ++K+ PL A IDYKD L +F+S RGKI R++ VS ++QR +AK
Sbjct: 24 PEIRKPI--KKKANPLKPGEAASIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRLIAK 81
Query: 68 AIKRARYLGLIAYVN 82
A+K AR + L+ Y +
Sbjct: 82 AVKNAREMALLPYTS 96
>gi|317050838|ref|YP_004111954.1| 30S ribosomal protein S18 [Desulfurispirillum indicum S5]
gi|316945922|gb|ADU65398.1| ribosomal protein S18 [Desulfurispirillum indicum S5]
Length = 123
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD++ L F+++R KI P R++ K QR LA AIKR+R +
Sbjct: 56 RKKVCAFCAEKVDYIDYKDVKRLRTFITERSKIKPRRMTGTCAKHQRSLATAIKRSRMMA 115
Query: 77 LIAYVNL 83
L+ + L
Sbjct: 116 LLPFTAL 122
>gi|224510695|pdb|3FIC|R Chain R, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
gi|300508622|pdb|3MR8|R Chain R, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3ms1. Molecule B In The Same Asymmetric Unit Is
Deposited As 3mrz (50s) And 3ms0 (30s).
gi|300508677|pdb|3MS0|R Chain R, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3mrz. Molecule A In The Same Asymmetric Unit Is
Deposited As 3mr8 (30s) And 3ms1 (50s).
gi|322812567|pdb|3PYN|R Chain R, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s
Ribosome.
gi|322812620|pdb|3PYQ|R Chain R, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812673|pdb|3PYS|R Chain R, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812726|pdb|3PYU|R Chain R, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 70
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 15 DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE 65
>gi|222530063|ref|YP_002573945.1| 30S ribosomal protein S18 [Caldicellulosiruptor bescii DSM 6725]
gi|222456910|gb|ACM61172.1| ribosomal protein S18 [Caldicellulosiruptor bescii DSM 6725]
Length = 92
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|189485365|ref|YP_001956306.1| 30S ribosomal protein S18 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|205618780|sp|B1H013|RS18_UNCTG RecName: Full=30S ribosomal protein S18
gi|170287324|dbj|BAG13845.1| 30S ribosomal protein S18 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 100
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RRN R+K C IDYK++ LL+ F++++GKI+ R++ K QREL
Sbjct: 24 PAGKFRRNGPIRKKVCRFCADKV-EIDYKNLSLLHTFVTEKGKILSGRMTGTCAKHQREL 82
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR + L+ +
Sbjct: 83 DTAIKRARMIALLPFT 98
>gi|312126896|ref|YP_003991770.1| 30S ribosomal protein S18 [Caldicellulosiruptor hydrothermalis
108]
gi|311776915|gb|ADQ06401.1| ribosomal protein S18 [Caldicellulosiruptor hydrothermalis 108]
Length = 92
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|227504198|ref|ZP_03934247.1| 30S ribosomal protein S18 [Corynebacterium striatum ATCC 6940]
gi|227199242|gb|EEI79290.1| 30S ribosomal protein S18 [Corynebacterium striatum ATCC 6940]
Length = 84
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R + R K PL +G +DYKD++ L F+S RGKI R++ ++ ++QR++A A+
Sbjct: 11 FRMEQTRRPKKNPLKAEGIETVDYKDVKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAV 70
Query: 70 KRARYLGLIAYV 81
K AR + L+ +
Sbjct: 71 KNAREMALLPFT 82
>gi|86156546|ref|YP_463331.1| 30S ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723166|sp|Q2IM64|RS18_ANADE RecName: Full=30S ribosomal protein S18
gi|85773057|gb|ABC79894.1| SSU ribosomal protein S18P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 135
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 69 KVCRFCADKTLKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 128
Query: 79 AYV 81
Y
Sbjct: 129 PYT 131
>gi|163755338|ref|ZP_02162458.1| 30S ribosomal protein S18 [Kordia algicida OT-1]
gi|161324758|gb|EDP96087.1| 30S ribosomal protein S18 [Kordia algicida OT-1]
Length = 98
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + +K C G IDYKD L +F++++GK++P R++ S K QR+++
Sbjct: 20 TPL-NIETTKAKKYCRFKKSGIKYIDYKDPDFLLKFVNEQGKLLPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYVG 94
>gi|302872491|ref|YP_003841127.1| ribosomal protein S18 [Caldicellulosiruptor obsidiansis OB47]
gi|302575350|gb|ADL43141.1| ribosomal protein S18 [Caldicellulosiruptor obsidiansis OB47]
Length = 92
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|218296081|ref|ZP_03496850.1| ribosomal protein S18 [Thermus aquaticus Y51MC23]
gi|218243458|gb|EED09987.1| ribosomal protein S18 [Thermus aquaticus Y51MC23]
Length = 89
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 34 DYRNVEVLRRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE 84
>gi|295398127|ref|ZP_06808176.1| 30S ribosomal protein S18 [Aerococcus viridans ATCC 11563]
gi|294973646|gb|EFG49424.1| 30S ribosomal protein S18 [Aerococcus viridans ATCC 11563]
Length = 78
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD LL R++S++GKI+P R++ K QR L IKRAR + LI +
Sbjct: 15 CFFCANHIDHVDYKDTDLLKRYISEKGKILPRRVTGTCAKHQRTLTAGIKRARIMALIPF 74
Query: 81 VN 82
Sbjct: 75 TT 76
>gi|238926740|ref|ZP_04658500.1| ribosomal protein S18 [Selenomonas flueggei ATCC 43531]
gi|292670198|ref|ZP_06603624.1| 30S ribosomal protein S18 [Selenomonas noxia ATCC 43541]
gi|304436795|ref|ZP_07396763.1| 30S ribosomal protein S18 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|238885272|gb|EEQ48910.1| ribosomal protein S18 [Selenomonas flueggei ATCC 43531]
gi|292648150|gb|EFF66122.1| 30S ribosomal protein S18 [Selenomonas noxia ATCC 43541]
gi|304370275|gb|EFM23932.1| 30S ribosomal protein S18 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 77
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C IDYKD L RF ++RGKI+P RIS K QR++ AIKRAR +
Sbjct: 11 RRKVCSFCVDKVDHIDYKDAAKLRRFTTERGKILPRRISGNCAKHQRQVTLAIKRARNIA 70
Query: 77 LIAYV 81
L+ +
Sbjct: 71 LLPFT 75
>gi|255326498|ref|ZP_05367580.1| ribosomal protein S18 [Rothia mucilaginosa ATCC 25296]
gi|283458977|ref|YP_003363626.1| 30S ribosomal protein S18 [Rothia mucilaginosa DY-18]
gi|300742675|ref|ZP_07072696.1| ribosomal protein S18 [Rothia dentocariosa M567]
gi|311112592|ref|YP_003983814.1| 30S ribosomal protein S18 [Rothia dentocariosa ATCC 17931]
gi|255296538|gb|EET75873.1| ribosomal protein S18 [Rothia mucilaginosa ATCC 25296]
gi|283135041|dbj|BAI65806.1| ribosomal protein S18 [Rothia mucilaginosa DY-18]
gi|300381860|gb|EFJ78422.1| ribosomal protein S18 [Rothia dentocariosa M567]
gi|310944086|gb|ADP40380.1| 30S ribosomal protein S18 [Rothia dentocariosa ATCC 17931]
Length = 78
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR + L+
Sbjct: 12 KQNPLKAADVTVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAREVALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|134097357|ref|YP_001103018.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|291009084|ref|ZP_06567057.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|205556498|sp|A4F7R8|RS181_SACEN RecName: Full=30S ribosomal protein S18 1
gi|133909980|emb|CAM00092.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
Length = 81
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R K L G ++D+KD LL RF+S RGKI R++ ++ ++QRE+A AIK
Sbjct: 6 RRGGQRRGKPNLLQRAGVVQVDWKDTDLLRRFISDRGKIRSRRVTGLTMQEQREVATAIK 65
Query: 71 RARYLGLIAY 80
AR + L+ Y
Sbjct: 66 NAREMALLPY 75
>gi|328886756|emb|CCA59995.1| SSU ribosomal protein S18p [Streptomyces venezuelae ATCC 10712]
Length = 78
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL G IDYKD +L +F+S RGKI R++ V+ ++QR LA AIK AR + L+ Y
Sbjct: 17 PLDAAGITYIDYKDTDVLRKFISDRGKIRSRRVTRVTARQQRRLAAAIKNAREMALLPYT 76
Query: 82 N 82
+
Sbjct: 77 S 77
>gi|108796846|ref|YP_636439.1| ribosomal protein S18 [Staurastrum punctulatum]
gi|122245549|sp|Q32RT7|RR18_STAPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|61393614|gb|AAX45755.1| ribosomal protein S18 [Staurastrum punctulatum]
Length = 80
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K IDYK++ LL +F+S++GKI+ RI+ ++ K+QR + KAIK AR L L+ ++N
Sbjct: 21 KPGENIDYKNVGLLRKFISEQGKILSKRITRLTSKQQRAMTKAIKSARILALLPFIN 77
>gi|296118271|ref|ZP_06836852.1| ribosomal protein S18 [Corynebacterium ammoniagenes DSM 20306]
gi|295968829|gb|EFG82073.1| ribosomal protein S18 [Corynebacterium ammoniagenes DSM 20306]
Length = 82
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R + R K PL +G ++DYKD + L F+S RGKI R++ ++ ++QR++A A+
Sbjct: 9 FRMEQTRRPKKNPLKAEGIEKVDYKDTKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAV 68
Query: 70 KRARYLGLIAYV 81
K AR + L+ +
Sbjct: 69 KNAREMALLPFT 80
>gi|183221480|ref|YP_001839476.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911567|ref|YP_001963122.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|205558218|sp|B0SB38|RS18_LEPBA RecName: Full=30S ribosomal protein S18
gi|205558230|sp|B0SSW0|RS18_LEPBP RecName: Full=30S ribosomal protein S18
gi|167776243|gb|ABZ94544.1| 30S Ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779902|gb|ABZ98200.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 94
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGA--PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
R+N +++K C A +DYK + +L RF++ RGKI+P RI+ K QR LA+
Sbjct: 20 RKNAKYKKKVCKFCADKALLAGLDYKRVDILERFVTNRGKIIPRRITGTCGKHQRALARE 79
Query: 69 IKRARYLGLIAY 80
I+++R +GL+ +
Sbjct: 80 IRKSRSIGLLPF 91
>gi|312792728|ref|YP_004025651.1| 30S ribosomal protein S18 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877716|ref|ZP_07737670.1| ribosomal protein S18 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795517|gb|EFR11892.1| ribosomal protein S18 [Caldicellulosiruptor lactoaceticus 6A]
gi|312179868|gb|ADQ40038.1| ribosomal protein S18 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 92
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 26 KKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 85
Query: 77 LIAYV 81
L+ ++
Sbjct: 86 LLPFI 90
>gi|116626134|ref|YP_828290.1| 30S ribosomal protein S18 [Candidatus Solibacter usitatus
Ellin6076]
gi|122251818|sp|Q01QR5|RS18_SOLUE RecName: Full=30S ribosomal protein S18
gi|116229296|gb|ABJ88005.1| SSU ribosomal protein S18P [Candidatus Solibacter usitatus
Ellin6076]
Length = 99
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + I+YKD+++L+ F+++RGKIVP RIS V QR L AIK+AR +
Sbjct: 32 RKKVCRFCVEKIDDINYKDVKMLHAFVAERGKIVPRRISGVCAPHQRRLTDAIKKARNIA 91
Query: 77 LIAYV 81
L+ +
Sbjct: 92 LLPFA 96
>gi|313159250|gb|EFR58619.1| ribosomal protein S18 [Alistipes sp. HGB5]
Length = 92
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIRYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFVT 88
>gi|205562295|sp|A9KKC8|RS18_CLOPH RecName: Full=30S ribosomal protein S18
Length = 76
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ K IDYKD+ L R++S+RGKI+P RI+ K QR L A+KRAR++ L+ Y
Sbjct: 17 ADKNHKEIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAVKRARHIALMPYT 74
>gi|284036033|ref|YP_003385963.1| ribosomal protein S18 [Spirosoma linguale DSM 74]
gi|283815326|gb|ADB37164.1| ribosomal protein S18 [Spirosoma linguale DSM 74]
Length = 83
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+R+K G IDYKD L + L+++GKI+P R++ S K QR++A+A+KRAR
Sbjct: 11 TENRKKYDRFKKAGIKYIDYKDGNFLLKLLNEQGKILPRRLTGTSLKNQRKVAQAVKRAR 70
Query: 74 YLGLIAYV 81
+L ++ YV
Sbjct: 71 HLAILPYV 78
>gi|227494167|ref|ZP_03924483.1| ribosomal protein S18 [Actinomyces coleocanis DSM 15436]
gi|226831901|gb|EEH64284.1| ribosomal protein S18 [Actinomyces coleocanis DSM 15436]
Length = 79
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P LR+ + ++K+ PL IDYKD LL +F+S RGKI R++ VS + QR +AK
Sbjct: 4 PQLRKPL--KKKANPLRTAKIENIDYKDTALLRKFISDRGKIRARRVTGVSVQDQRRIAK 61
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 62 AVKNAREMALLPY 74
>gi|297565278|ref|YP_003684250.1| 30S ribosomal protein S18 [Meiothermus silvanus DSM 9946]
gi|296849727|gb|ADH62742.1| ribosomal protein S18 [Meiothermus silvanus DSM 9946]
Length = 97
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ +L RFLS+ GKI+P R + ++ ++QR++A+ IKRAR LGL+ + +
Sbjct: 41 TDYKNVEVLKRFLSETGKILPRRRTGLNAQEQRKIARTIKRARMLGLLPFTD 92
>gi|118475552|ref|YP_892291.1| 30S ribosomal protein S18 [Campylobacter fetus subsp. fetus
82-40]
gi|261885280|ref|ZP_06009319.1| 30S ribosomal protein S18 [Campylobacter fetus subsp. venerealis
str. Azul-94]
gi|166220938|sp|A0RQ08|RS18_CAMFF RecName: Full=30S ribosomal protein S18
gi|118414778|gb|ABK83198.1| ribosomal protein S18 [Campylobacter fetus subsp. fetus 82-40]
Length = 86
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ +K C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR++
Sbjct: 7 YSKKYCKYTEAKVEFIDYKDTTLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARHV 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|218778773|ref|YP_002430091.1| 30S ribosomal protein S18 [Desulfatibacillum alkenivorans AK-01]
gi|218760157|gb|ACL02623.1| ribosomal protein S18 [Desulfatibacillum alkenivorans AK-01]
Length = 82
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C I+YKD R L F ++RGKIVP RIS K QR L AIKRAR + L+ +
Sbjct: 16 CRFCADKTLEINYKDPRTLKYFTTERGKIVPRRISGTCAKHQRALTTAIKRARAIALMPF 75
Query: 81 VN 82
V
Sbjct: 76 VG 77
>gi|296127398|ref|YP_003634650.1| ribosomal protein S18 [Brachyspira murdochii DSM 12563]
gi|296019214|gb|ADG72451.1| ribosomal protein S18 [Brachyspira murdochii DSM 12563]
Length = 112
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C +DYKDI+LL R++ GKI+P R++ K QR + KAIKRAR +
Sbjct: 45 KKKVCYFCKNNIDVLDYKDIKLLKRYVKDSGKIIPKRLNGTCSKHQRLVTKAIKRARNIA 104
Query: 77 LIAY 80
L+ Y
Sbjct: 105 LLPY 108
>gi|297192957|ref|ZP_06910355.1| 30S ribosomal protein S18 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|197722638|gb|EDY66546.1| 30S ribosomal protein S18 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 82
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD LL +F+S RGKI R++ VS ++QR+LA+AIK AR + L+ Y +
Sbjct: 27 IDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQLARAIKNAREMALLPYTS 78
>gi|225619963|ref|YP_002721220.1| 30S ribosomal protein S18 [Brachyspira hyodysenteriae WA1]
gi|254765412|sp|C0R078|RS18_BRAHW RecName: Full=30S ribosomal protein S18
gi|225214782|gb|ACN83516.1| 30S ribosomal protein S18 [Brachyspira hyodysenteriae WA1]
Length = 111
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C +DYKDI+LL R++ GKI+P R++ K QR + KAIKRAR +
Sbjct: 44 KKKVCYFCKNNIDVLDYKDIKLLKRYVKDSGKIIPKRLNGTCSKHQRLVTKAIKRARNIA 103
Query: 77 LIAY 80
L+ Y
Sbjct: 104 LLPY 107
>gi|290487270|gb|ADD30019.1| ribosomal protein S18 [Heuchera sanguinea]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|269124212|ref|YP_003306789.1| 30S ribosomal protein S18 [Streptobacillus moniliformis DSM
12112]
gi|268315538|gb|ACZ01912.1| ribosomal protein S18 [Streptobacillus moniliformis DSM 12112]
Length = 77
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
IDYK++ LL F++ +GKI PSR++ + K QR++AKAIKR+R + L+ Y +
Sbjct: 23 IDYKNVDLLKNFMNDKGKISPSRVTGLDAKIQRKIAKAIKRSRQIALLPYTKI 75
>gi|283794990|ref|YP_003359381.1| ribosomal protein S18 [Olea europaea]
gi|330850765|ref|YP_004376443.1| ribosomal protein S18 [Olea europaea subsp. europaea]
gi|110456626|gb|ABG74753.1| ribosomal protein S18 [Forsythia europaea]
gi|110456697|gb|ABG74806.1| ribosomal protein S18 [Jasminum abyssinicum]
gi|281428709|gb|ADA69948.1| ribosomal protein S18 [Olea europaea]
gi|290487234|gb|ADD30001.1| ribosomal protein S18 [Antirrhinum majus]
gi|291059275|gb|ADD72111.1| ribosomal protein S18 [Olea europaea]
gi|328795455|emb|CBR30337.1| ribosomal protein S18 [Olea europaea subsp. europaea]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|160881890|ref|YP_001560858.1| 30S ribosomal protein S18 [Clostridium phytofermentans ISDg]
gi|160430556|gb|ABX44119.1| ribosomal protein S18 [Clostridium phytofermentans ISDg]
Length = 91
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ K IDYKD+ L R++S+RGKI+P RI+ K QR L A+KRAR++ L+ Y
Sbjct: 31 CADKNHKEIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAVKRARHIALMPYT 89
>gi|11497549|ref|NP_054957.1| ribosomal protein S18 [Spinacia oleracea]
gi|18203259|sp|Q9M3K7|RR18_SPIOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|7636130|emb|CAB88750.1| ribosomal protein S18 [Spinacia oleracea]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITS 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|290487236|gb|ADD30002.1| ribosomal protein S18 [Aucuba japonica]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|188036219|pdb|3BBN|R Chain R, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 103
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITS 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|114107155|ref|YP_740139.1| ribosomal protein S18 [Daucus carota]
gi|122233831|sp|Q0G9U0|RR18_DAUCA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113200930|gb|ABI32446.1| ribosomal protein S18 [Daucus carota]
gi|156574736|gb|ABU85200.1| ribosomal protein S18 [Anethum graveolens]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|139389664|ref|YP_001123221.1| ribosomal protein S18 [Arabis hirsuta]
gi|205831416|sp|A4QK40|RR18_ARAHI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286419|dbj|BAF50045.1| ribosomal protein S18 [Arabis hirsuta]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR +
Sbjct: 7 PFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITM 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|139389286|ref|YP_001123052.1| ribosomal protein S18 [Aethionema grandiflorum]
gi|205831413|sp|A4QJM1|RR18_AETGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286248|dbj|BAF49876.1| ribosomal protein S18 [Aethionema grandiflorum]
Length = 101
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITSAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFIN 79
>gi|325955201|ref|YP_004238861.1| 30S ribosomal protein S18 [Weeksella virosa DSM 16922]
gi|323437819|gb|ADX68283.1| 30S ribosomal protein S18 [Weeksella virosa DSM 16922]
Length = 100
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G +DYKD L +F++++GKI+P R + S K QR++++AIKRAR+L L
Sbjct: 32 KKYCRFRKYGIKYVDYKDADFLLQFVNEQGKILPRRYTGTSLKYQRKVSRAIKRARHLAL 91
Query: 78 IAYVN 82
+ +V
Sbjct: 92 LPFVG 96
>gi|227832647|ref|YP_002834354.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
gi|262182868|ref|ZP_06042289.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
gi|227453663|gb|ACP32416.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
Length = 84
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R + R K PL +G ++DYK+I+ L F+S RGKI R++ ++ ++QR++A A+
Sbjct: 11 FRMEQTRRPKKNPLKAEGIEKVDYKEIKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAV 70
Query: 70 KRARYLGLIAYVN 82
K AR + L+ + +
Sbjct: 71 KNAREMALLPFTS 83
>gi|330839912|ref|YP_004414492.1| 30S ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
gi|329747676|gb|AEC01033.1| 30S ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
Length = 77
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCTFCVDKVDVIDYKDVAKLRRFITERGKILPRRISGNCAKHQRQVTLAIKRARNIALL 72
Query: 79 AY 80
+
Sbjct: 73 PF 74
>gi|153002998|ref|YP_001377323.1| 30S ribosomal protein S18 [Anaeromyxobacter sp. Fw109-5]
gi|205556807|sp|A7H6J3|RS18_ANADF RecName: Full=30S ribosomal protein S18
gi|152026571|gb|ABS24339.1| ribosomal protein S18 [Anaeromyxobacter sp. Fw109-5]
Length = 143
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C ++DYKD + FL++RGKI+P RIS K QRE+A A+KR R L ++
Sbjct: 77 KVCRFCADKTLKVDYKDQSQMKYFLTERGKIIPRRISGNCAKHQREVATAVKRGRMLAIL 136
Query: 79 AYV 81
Y
Sbjct: 137 PYT 139
>gi|290487250|gb|ADD30009.1| ribosomal protein S18 [Nerium oleander]
Length = 101
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--ESGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|260437868|ref|ZP_05791684.1| ribosomal protein S18 [Butyrivibrio crossotus DSM 2876]
gi|292809894|gb|EFF69099.1| ribosomal protein S18 [Butyrivibrio crossotus DSM 2876]
Length = 88
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD L RF+S+RGKI+P RI+ K QR L A+KRAR + ++ Y
Sbjct: 26 CVFCADSTNVIDYKDANKLKRFVSERGKILPRRITGTCAKHQRALTVAVKRARQIAILPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|323149104|ref|YP_004222668.1| ribosomal protein S18 [Anthriscus cerefolium]
gi|289645597|gb|ADD13660.1| ribosomal protein S18 [Anthriscus cerefolium]
Length = 101
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|11466725|ref|NP_039321.1| ribosomal protein S18 [Marchantia polymorpha]
gi|133838|sp|P06375|RR18_MARPO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|11695|emb|CAA28107.1| rps18 [Marchantia polymorpha]
Length = 75
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR L AIKRAR
Sbjct: 7 SSRRRMPPI--RSGEIIDYKNISLLRRFVSEQGKILSRRMNRLTSKQQRLLTIAIKRARV 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LALLPFLN 72
>gi|84497235|ref|ZP_00996057.1| 30S ribosomal protein S18-2 [Janibacter sp. HTCC2649]
gi|84382123|gb|EAP98005.1| 30S ribosomal protein S18-2 [Janibacter sp. HTCC2649]
Length = 73
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K+ PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR +
Sbjct: 5 KKKANPLKAAKVENIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIANAVKNAREMA 64
Query: 77 LIAY 80
L+ Y
Sbjct: 65 LLPY 68
>gi|52220832|ref|YP_086988.1| ribosomal protein S18 [Panax ginseng]
gi|62287418|sp|Q68RY4|RR18_PANGI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|51235335|gb|AAT98531.1| ribosomal protein S18 [Panax ginseng]
Length = 101
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|260655513|ref|ZP_05861001.1| ribosomal protein S18 [Jonquetella anthropi E3_33 E1]
gi|260629961|gb|EEX48155.1| ribosomal protein S18 [Jonquetella anthropi E3_33 E1]
Length = 82
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ L +++S+RGKIVP R++ K QR+L AIKRAR++ L+
Sbjct: 18 KVCYYCADKLEHADYKDVDRLRKYVSERGKIVPRRVTGNCAKHQRQLTIAIKRARFMALL 77
Query: 79 AYV 81
Y
Sbjct: 78 PYT 80
>gi|146296359|ref|YP_001180130.1| 30S ribosomal protein S18 [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|205557109|sp|A4XJ54|RS18_CALS8 RecName: Full=30S ribosomal protein S18
gi|145409935|gb|ABP66939.1| SSU ribosomal protein S18P [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 91
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR L
Sbjct: 25 KKRVCSFCVERIYDIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARILA 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFI 89
>gi|11465981|ref|NP_054523.1| ribosomal protein S18 [Nicotiana tabacum]
gi|28261739|ref|NP_783254.1| ribosomal protein S18 [Atropa belladonna]
gi|78102560|ref|YP_358701.1| ribosomal protein S18 [Nicotiana sylvestris]
gi|81301590|ref|YP_398887.1| ribosomal protein S18 [Nicotiana tomentosiformis]
gi|89280657|ref|YP_514874.1| ribosomal protein S18 [Solanum lycopersicum]
gi|91209010|ref|YP_538870.1| ribosomal protein S18 [Solanum bulbocastanum]
gi|108773152|ref|YP_635661.1| ribosomal protein S18 [Solanum tuberosum]
gi|62288969|sp|P69659|RR18_ATRBE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62288970|sp|P69660|RR18_TOBAC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122226851|sp|Q3C1K7|RR18_NICSY RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122233122|sp|Q33C10|RR18_NICTO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122245043|sp|Q2MIG5|RR18_SOLBU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122248444|sp|Q2MI78|RR18_SOLLC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122248893|sp|Q2VEF6|RR18_SOLTU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|11851|emb|CAA77371.1| ribosomal protein S18 [Nicotiana tabacum]
gi|20068353|emb|CAC88066.1| ribosomal protein S18 [Atropa belladonna]
gi|77799587|dbj|BAE46676.1| ribosomal protein S18 [Nicotiana sylvestris]
gi|80750949|dbj|BAE48025.1| ribosomal protein S18 [Nicotiana tomentosiformis]
gi|82754648|gb|ABB90062.1| ribosomal protein S18 [Solanum tuberosum]
gi|84371917|gb|ABC56235.1| ribosomal protein S18 [Solanum bulbocastanum]
gi|84372005|gb|ABC56322.1| ribosomal protein S18 [Solanum lycopersicum]
gi|88656826|gb|ABD47079.1| ribosomal protein S18 [Solanum tuberosum]
gi|89241693|emb|CAJ32415.1| ribosomal protein S18 [Solanum lycopersicum]
gi|225220|prf||1211235BB ribosomal protein S18
Length = 101
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKFKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITL 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|163788027|ref|ZP_02182473.1| 30S ribosomal protein S18 [Flavobacteriales bacterium ALC-1]
gi|159876347|gb|EDP70405.1| 30S ribosomal protein S18 [Flavobacteriales bacterium ALC-1]
Length = 98
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S +K C G +DYKD L F++++GK++P R++ S K QR+++
Sbjct: 20 TPL-NIETSKTKKYCRFKKSGIKYVDYKDADWLLGFVNEQGKLLPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYV 93
>gi|223931053|ref|YP_002586914.1| ribosomal protein S18 [Syntrichia ruralis]
gi|219562267|gb|ACL27598.1| ribosomal protein S18 [Syntrichia ruralis]
Length = 75
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 7 SSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMTRLTSKQQRLMTIAIKRARV 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LALLPFLN 72
>gi|193214370|ref|YP_001995569.1| 30S ribosomal protein S18 [Chloroherpeton thalassium ATCC 35110]
gi|193087847|gb|ACF13122.1| ribosomal protein S18 [Chloroherpeton thalassium ATCC 35110]
Length = 90
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+D R L RF++++GKI+P RI+ +S K+QR L K+IK AR+L +I +V+
Sbjct: 35 FDYRDDRKLRRFINEQGKIIPRRITGLSAKEQRLLTKSIKWARHLAIIPFVS 86
>gi|313906073|ref|ZP_07839425.1| ribosomal protein S18 [Eubacterium cellulosolvens 6]
gi|313469118|gb|EFR64468.1| ribosomal protein S18 [Eubacterium cellulosolvens 6]
Length = 101
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD L R++S+RGKI+P R++ K QR + A+KRAR+L ++ Y
Sbjct: 40 CVFCGKD-NEIDYKDAAKLRRYISERGKILPRRVTGNCAKHQRAITLAVKRARHLAILPY 98
Query: 81 V 81
V
Sbjct: 99 V 99
>gi|269925896|ref|YP_003322519.1| ribosomal protein S18 [Thermobaculum terrenum ATCC BAA-798]
gi|269789556|gb|ACZ41697.1| ribosomal protein S18 [Thermobaculum terrenum ATCC BAA-798]
Length = 116
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C ++DYKDI + R+LS R KI R + K QR LA A+KRARY+
Sbjct: 46 RRKVCAFCADHIDKVDYKDIARIGRYLSDRAKIEGRRKTGTCAKHQRSLAVALKRARYMA 105
Query: 77 LIAYV 81
L+ Y
Sbjct: 106 LMPYT 110
>gi|284047425|ref|YP_003397764.1| ribosomal protein S18 [Acidaminococcus fermentans DSM 20731]
gi|283951646|gb|ADB46449.1| ribosomal protein S18 [Acidaminococcus fermentans DSM 20731]
Length = 78
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L +F+++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 14 KVCSFCVDKVQEIDYKDAAKLRKFITERGKILPRRISGTCAKHQRQLTIAIKRARNVALL 73
Query: 79 AYV 81
+
Sbjct: 74 PFT 76
>gi|1350881|sp|P49169|RR18_PEA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1054830|emb|CAA57885.1| chloroplast ribosomal protein S18 [Pisum sativum]
Length = 110
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+S PL G RIDYK++ LL +F+S++GKI+ R++ ++ K+QR + AIK+AR L L
Sbjct: 16 RRSSPLIQSG-DRIDYKNLSLLFKFISRQGKILSRRVNKLTLKQQRLITIAIKQARILSL 74
Query: 78 IAYVN 82
+ +VN
Sbjct: 75 LPFVN 79
>gi|319442737|ref|ZP_07991893.1| 30S ribosomal protein S18 [Corynebacterium variabile DSM 44702]
Length = 83
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL +G +DYKD LL +F+S RGKI R++ ++ ++QR++A A+K AR
Sbjct: 15 SRRPKKNPLKAEGIETVDYKDYALLRKFISDRGKIRGRRVTGLTPQQQRQVATAVKNARE 74
Query: 75 LGLIAY 80
+ L+ +
Sbjct: 75 MALLPF 80
>gi|319951620|ref|YP_004162887.1| ssu ribosomal protein s18p [Cellulophaga algicola DSM 14237]
gi|319420280|gb|ADV47389.1| SSU ribosomal protein S18P [Cellulophaga algicola DSM 14237]
Length = 98
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + + ++K C G +DYKD L + ++++GK++P R++ S K QR++A
Sbjct: 20 TPL-NIDTNTQKKYCRFKKSGIKYVDYKDPDFLIKLVNEQGKLLPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYV 93
>gi|148657503|ref|YP_001277708.1| 30S ribosomal protein S18 [Roseiflexus sp. RS-1]
gi|205556677|sp|A5UYQ5|RS182_ROSS1 RecName: Full=30S ribosomal protein S18 2
gi|148569613|gb|ABQ91758.1| SSU ribosomal protein S18P [Roseiflexus sp. RS-1]
Length = 90
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +DYKD++ L R +S+RGKI+P R + V + QR L AIKRAR++ L+
Sbjct: 22 KVCMFCADQIRVVDYKDVKRLQRCMSERGKILPRRRTGVCARHQRSLTVAIKRARHMALL 81
Query: 79 AYV 81
+V
Sbjct: 82 PFV 84
>gi|332672266|ref|YP_004455274.1| 30S ribosomal protein S18 [Cellulomonas fimi ATCC 484]
gi|332341304|gb|AEE47887.1| ribosomal protein S18 [Cellulomonas fimi ATCC 484]
Length = 78
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K PL +DYKD LL +F+S RGKI R++ VS ++QR +A+A+K AR +
Sbjct: 10 KKKQNPLKAAKIESVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRAIARAVKNAREMA 69
Query: 77 LIAY 80
L+ Y
Sbjct: 70 LLPY 73
>gi|228469704|ref|ZP_04054672.1| ribosomal protein S18 [Porphyromonas uenonis 60-3]
gi|228308723|gb|EEK17449.1| ribosomal protein S18 [Porphyromonas uenonis 60-3]
Length = 88
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C +DYKD L +FL+ +GKI+P RI+ S K QR +A+A+KRAR+L
Sbjct: 18 QQKKYCRFKKARIKFVDYKDPEFLKKFLNDQGKILPRRITGNSLKFQRRVAQAVKRARHL 77
Query: 76 GLIAYVN 82
L+ +V
Sbjct: 78 ALLPFVT 84
>gi|327403002|ref|YP_004343840.1| 30S ribosomal protein S18P [Fluviicola taffensis DSM 16823]
gi|327318510|gb|AEA43002.1| SSU ribosomal protein S18P [Fluviicola taffensis DSM 16823]
Length = 87
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ K C G ID+KD L R ++++GKI+P RI+ S K Q+ + KAIKRAR+L
Sbjct: 18 KDKYCRFKKSGIKFIDFKDATFLLRLVNEQGKILPRRITGTSAKYQKRVNKAIKRARHLA 77
Query: 77 LIAYV 81
++ YV
Sbjct: 78 ILPYV 82
>gi|262197682|ref|YP_003268891.1| ribosomal protein S18 [Haliangium ochraceum DSM 14365]
gi|262081029|gb|ACY16998.1| ribosomal protein S18 [Haliangium ochraceum DSM 14365]
Length = 105
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYK+ +LL F++ RGKI P RIS K QR LA AI+RAR +
Sbjct: 37 RRKVCRFCLDNTVTLDYKNAQLLKNFITDRGKITPRRISGNCAKHQRALALAIRRARMIA 96
Query: 77 LIAY 80
L+ +
Sbjct: 97 LLPF 100
>gi|223039715|ref|ZP_03610001.1| ribosomal protein S18 [Campylobacter rectus RM3267]
gi|222879098|gb|EEF14193.1| ribosomal protein S18 [Campylobacter rectus RM3267]
Length = 86
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR
Sbjct: 7 YSRKYCKFTEAKIEFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARQA 66
Query: 76 GLIAYV 81
LI YV
Sbjct: 67 ALIPYV 72
>gi|68536624|ref|YP_251329.1| 30S ribosomal protein S18 [Corynebacterium jeikeium K411]
gi|260577825|ref|ZP_05845759.1| 30S ribosomal protein S18 [Corynebacterium jeikeium ATCC 43734]
gi|123734548|sp|Q4JTZ6|RS18_CORJK RecName: Full=30S ribosomal protein S18
gi|68264223|emb|CAI37711.1| 30S ribosomal protein S18 [Corynebacterium jeikeium K411]
gi|258604052|gb|EEW17295.1| 30S ribosomal protein S18 [Corynebacterium jeikeium ATCC 43734]
Length = 82
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL +G +DYK+ LL +F+S+RGKI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAEGIETVDYKNYDLLRKFISERGKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAY 80
+ L+ +
Sbjct: 74 MALLPF 79
>gi|325003294|ref|ZP_08124406.1| 30S ribosomal protein S18 [Pseudonocardia sp. P1]
Length = 80
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK+ PL +G +D+KD LL F+S RGKI R++ ++ ++QR++A AI+ AR +
Sbjct: 12 RRKANPLKVRGIEHVDWKDAALLRTFISDRGKIRARRVTGLTGRQQRQVALAIRNAREMA 71
Query: 77 LIAY 80
L+ Y
Sbjct: 72 LLPY 75
>gi|302538024|ref|ZP_07290366.1| ribosomal protein S18 [Streptomyces sp. C]
gi|302446919|gb|EFL18735.1| ribosomal protein S18 [Streptomyces sp. C]
Length = 78
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL G IDYKD LL +F+S RGKI R++ V+ ++QR LA AIK AR + L+ Y
Sbjct: 17 PLDTAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVTAQQQRRLALAIKNAREMALLPYA 76
>gi|225023067|ref|ZP_03712259.1| hypothetical protein CORMATOL_03115 [Corynebacterium matruchotii
ATCC 33806]
gi|305681805|ref|ZP_07404609.1| ribosomal protein S18 [Corynebacterium matruchotii ATCC 14266]
gi|224944290|gb|EEG25499.1| hypothetical protein CORMATOL_03115 [Corynebacterium matruchotii
ATCC 33806]
gi|305658278|gb|EFM47781.1| ribosomal protein S18 [Corynebacterium matruchotii ATCC 14266]
Length = 82
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
T +R S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A
Sbjct: 6 TKKVRMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 TAVKNAREMALLPFTS 81
>gi|159161272|ref|YP_001542550.1| ribosomal protein S18 [Cuscuta exaltata]
gi|205831384|sp|A8W3E3|RR18_CUSEX RecName: Full=Plastid 30S ribosomal protein S18
gi|158938697|gb|ABW83714.1| ribosomal protein S18 [Cuscuta exaltata]
Length = 117
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ K RIDY++I L++RFLS++GKI+ R++ + K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--KSGDRIDYRNISLISRFLSEQGKILSKRVNRFTLKQQRLITL 64
Query: 68 AIKRARYLGLIAYV 81
AIK+AR L L+ +
Sbjct: 65 AIKQARILSLLPFT 78
>gi|238917873|ref|YP_002931390.1| small subunit ribosomal protein S18 [Eubacterium eligens ATCC
27750]
gi|238873233|gb|ACR72943.1| small subunit ribosomal protein S18 [Eubacterium eligens ATCC
27750]
Length = 87
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C +DYKD+ L ++S+RGKI+P RI+ K QR L A+KRAR++ L
Sbjct: 22 KKVCAFCADANKVLDYKDVATLKHYVSERGKILPRRITGNCAKHQRALTVAVKRARHVAL 81
Query: 78 IAY 80
+ Y
Sbjct: 82 LPY 84
>gi|269217871|ref|ZP_06161725.1| ribosomal protein S18 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212806|gb|EEZ79146.1| ribosomal protein S18 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 78
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+LR+ ++K+ PL IDYKD L +F+S RGKI R++ V+ ++QR++A+
Sbjct: 4 PVLRK---PKKKANPLKSAKIENIDYKDTATLRKFISDRGKIRARRVTGVTVQEQRKIAR 60
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 61 AVKNAREMALLPY 73
>gi|257439412|ref|ZP_05615167.1| ribosomal protein S18 [Faecalibacterium prausnitzii A2-165]
gi|257198071|gb|EEU96355.1| ribosomal protein S18 [Faecalibacterium prausnitzii A2-165]
Length = 71
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 5 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRALTTAIKRARHVA 64
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 65 LMPYVS 70
>gi|255321378|ref|ZP_05362538.1| ribosomal protein S18 [Campylobacter showae RM3277]
gi|255301531|gb|EET80788.1| ribosomal protein S18 [Campylobacter showae RM3277]
Length = 86
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR
Sbjct: 7 YSRKYCKFTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARQA 66
Query: 76 GLIAYV 81
LI YV
Sbjct: 67 ALIPYV 72
>gi|255035775|ref|YP_003086396.1| 30S ribosomal protein S18 [Dyadobacter fermentans DSM 18053]
gi|254948531|gb|ACT93231.1| ribosomal protein S18 [Dyadobacter fermentans DSM 18053]
Length = 83
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K C G IDYK+ L + ++++GKI+P R++ S K QR++++AIKRAR+L
Sbjct: 13 NRKKYCRFKKAGIKYIDYKNPDFLLKLVNEQGKILPRRLTGTSLKYQRKVSQAIKRARHL 72
Query: 76 GLIAYV 81
L+ +V
Sbjct: 73 ALLPFV 78
>gi|33519564|ref|NP_878396.1| 30S ribosomal protein S18 [Candidatus Blochmannia floridanus]
gi|59798862|sp|Q7VQN8|RS18_BLOFL RecName: Full=30S ribosomal protein S18
gi|33517227|emb|CAD83609.1| 30S ribosomal subunit protein S18 [Candidatus Blochmannia
floridanus]
Length = 78
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+L R + HR K C + +DYKD+ + + + KI+PSRI+ K QR+LA+A
Sbjct: 3 ILPRYIRHR-KFCRFTADKCIYVDYKDLSKIQHSIIENAKIIPSRITGTRSKYQRQLARA 61
Query: 69 IKRARYLGLIAYVN 82
IK AR+L L+ Y++
Sbjct: 62 IKIARFLSLLPYID 75
>gi|304373311|ref|YP_003856520.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
gi|304309502|gb|ADM21982.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
Length = 80
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ +L +F++ GKI PSRI+ K QR+++ AIKRAR + L+A+
Sbjct: 14 CHFCETQTVYIDYKNVEVLEKFVNPHGKIQPSRITGSCSKHQRQVSLAIKRARMIALMAF 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|302527614|ref|ZP_07279956.1| ribosomal protein S18 [Streptomyces sp. AA4]
gi|302436509|gb|EFL08325.1| ribosomal protein S18 [Streptomyces sp. AA4]
Length = 81
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ RR+ G R+D+KD+ LL +F+S RGKI R++ ++ ++Q+++A AIK AR
Sbjct: 10 TPRRRPNAFHAAGITRVDWKDVDLLRKFISDRGKIRARRVTGLTPQQQKQVATAIKNARE 69
Query: 75 LGLIAY 80
+ L+ Y
Sbjct: 70 MALLPY 75
>gi|294787280|ref|ZP_06752533.1| ribosomal protein S18 [Parascardovia denticolens F0305]
gi|315227162|ref|ZP_07868949.1| 30S ribosomal protein S18 [Parascardovia denticolens DSM 10105]
gi|294484636|gb|EFG32271.1| ribosomal protein S18 [Parascardovia denticolens F0305]
gi|315119612|gb|EFT82745.1| 30S ribosomal protein S18 [Parascardovia denticolens DSM 10105]
Length = 91
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKD+ LL +F+S RGKI RI+ VS ++QR++A+AIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVSVQEQRKIARAIKNAREMALLPY 77
>gi|38258439|sp|Q85UY0|RR18_PSEMZ RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30171142|gb|AAN18254.1| Rps18 [Pseudotsuga menziesii]
Length = 86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RRN++ R+ G G RIDYK++ L++RF+S++G I+ R++ ++ K+QR +
Sbjct: 8 PKRSFRRNLTPIRRHLSPIGSGD-RIDYKNMSLISRFISEQGXILSGRVNRLTSKQQRLM 66
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 67 TNAIKRARILSLLPFL 82
>gi|188587503|ref|YP_001919048.1| SSU ribosomal protein S18P [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|205558577|sp|B2A454|RS18_NATTJ RecName: Full=30S ribosomal protein S18
gi|179352190|gb|ACB86460.1| SSU ribosomal protein S18P [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 74
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K C + + YKD+ L +++++RGKI+P RI+ K QR+L AIK+AR L
Sbjct: 7 RNKVCSFCAEKTTTVSYKDLDRLKKYITERGKILPRRINGNCAKHQRQLTTAIKKARQLA 66
Query: 77 LIAYV 81
L+ Y
Sbjct: 67 LLPYT 71
>gi|166235789|gb|ABY85693.1| ribosomal protein S18 [Silene fruticosa]
Length = 113
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++RL+NRF S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDRIDYRNMRLINRFSSEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAY 80
AIKRAR L L+ +
Sbjct: 65 AIKRARILALLPF 77
>gi|114777954|ref|ZP_01452868.1| ribosomal protein S18 [Mariprofundus ferrooxydans PV-1]
gi|114551741|gb|EAU54293.1| ribosomal protein S18 [Mariprofundus ferrooxydans PV-1]
Length = 119
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + IDYK+ LL F+++R KI+PSR++ QR L AIKRAR L
Sbjct: 50 RRKFCKFCAEKNVTIDYKNPDLLRGFITERYKILPSRVTGTCSSHQRRLTTAIKRARVLA 109
Query: 77 LIAYVNL 83
LI + L
Sbjct: 110 LIPFTPL 116
>gi|332298063|ref|YP_004439985.1| 30S ribosomal protein S18 [Treponema brennaborense DSM 12168]
gi|332181166|gb|AEE16854.1| 30S ribosomal protein S18 [Treponema brennaborense DSM 12168]
Length = 103
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + A +IDYKD L R+ ++RGKI+P RI+ K QR LA IKRAR +
Sbjct: 38 RKKVCRFCAQKA-KIDYKDADALRRYTTERGKILPRRITGTCAKHQRRLALEIKRARAIC 96
Query: 77 LIAYV 81
L+ +V
Sbjct: 97 LLPFV 101
>gi|160892971|ref|ZP_02073759.1| hypothetical protein CLOL250_00508 [Clostridium sp. L2-50]
gi|156865054|gb|EDO58485.1| hypothetical protein CLOL250_00508 [Clostridium sp. L2-50]
Length = 87
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A P+ RRN+ R+K C IDYKD L R++S+RGKI+P RI+ K QR
Sbjct: 9 ADAPMKRRNIRRRKKVCVFCADKTAVIDYKDANKLKRYISERGKILPRRITGNCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYV 81
L A+KRAR + ++ YV
Sbjct: 69 LTVAVKRARQIAILPYV 85
>gi|150020533|ref|YP_001305887.1| 30S ribosomal protein S18 [Thermosipho melanesiensis BI429]
gi|166222253|sp|A6LKQ1|RS18_THEM4 RecName: Full=30S ribosomal protein S18
gi|149793054|gb|ABR30502.1| ribosomal protein S18 [Thermosipho melanesiensis BI429]
Length = 75
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C L +DYKD++LL FL+++ KI+P R++ K QR + AIKRAR + L+
Sbjct: 11 KVCKLCQSKIDYVDYKDVKLLREFLTEKEKIIPRRVTGNCAKHQRMVKIAIKRARQMALL 70
Query: 79 AYVN 82
YV
Sbjct: 71 PYVK 74
>gi|19552092|ref|NP_600094.1| 30S ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|25027496|ref|NP_737550.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
gi|62389755|ref|YP_225157.1| 30S ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|145295036|ref|YP_001137857.1| 30S ribosomal protein S18 [Corynebacterium glutamicum R]
gi|259507096|ref|ZP_05749996.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
gi|54039410|sp|P66456|RS18_COREF RecName: Full=30S ribosomal protein S18
gi|54042145|sp|P66455|RS18_CORGL RecName: Full=30S ribosomal protein S18
gi|166220949|sp|A4QCK8|RS18_CORGB RecName: Full=30S ribosomal protein S18
gi|21323632|dbj|BAB98259.1| Ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|23492778|dbj|BAC17750.1| putative 30S ribosomal protein S18 [Corynebacterium efficiens
YS-314]
gi|41325090|emb|CAF19571.1| 30S RIBOSOMAL PROTEIN S18 [Corynebacterium glutamicum ATCC 13032]
gi|140844956|dbj|BAF53955.1| hypothetical protein [Corynebacterium glutamicum R]
gi|259165374|gb|EEW49928.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
Length = 83
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ R K PL G ++DYKDI L +F+S R KI R++ ++ ++QRE+A A+K AR
Sbjct: 15 TRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQREVATAVKNARE 74
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 75 MALLPFT 81
>gi|296131515|ref|YP_003638765.1| ribosomal protein S18 [Cellulomonas flavigena DSM 20109]
gi|296023330|gb|ADG76566.1| ribosomal protein S18 [Cellulomonas flavigena DSM 20109]
Length = 78
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR + L+ Y
Sbjct: 15 PLKAAKIETVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIARAVKNAREMALLPY 73
>gi|146216940|ref|NP_904178.2| ribosomal protein S18 [Physcomitrella patens subsp. patens]
Length = 75
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 7 SSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIAIKRARV 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LALLPFLN 72
>gi|260893966|ref|YP_003240063.1| ribosomal protein S18 [Ammonifex degensii KC4]
gi|260866107|gb|ACX53213.1| ribosomal protein S18 [Ammonifex degensii KC4]
Length = 76
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + ++DYKD+ L +F+S RGKI+P RI+ + QR L AIKRAR + L+ +
Sbjct: 14 CSFCVEKIDKVDYKDVNRLKKFISDRGKILPRRITGNCARHQRMLTVAIKRARIMALLPF 73
Query: 81 VN 82
V+
Sbjct: 74 VS 75
>gi|298208563|ref|YP_003716742.1| ribosomal protein S18 [Croceibacter atlanticus HTCC2559]
gi|83848486|gb|EAP86355.1| ribosomal protein S18 [Croceibacter atlanticus HTCC2559]
Length = 100
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S + K C G IDYK+ L ++++GK++P R++ S K QR++A
Sbjct: 21 TPL-NIETSKKEKYCRFKKNGIKYIDYKNPDFLGMLVNEQGKLLPRRLTGTSLKYQRKVA 79
Query: 67 KAIKRARYLGLIAYVN 82
+A+KRAR++ L+ YV
Sbjct: 80 QAVKRARHIALMPYVT 95
>gi|315925593|ref|ZP_07921803.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621134|gb|EFV01105.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 74
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYKDI L +++S+RGKI+P R + K QR++ +A+ RAR +
Sbjct: 8 RRKVCEFCEHEDMVVDYKDIATLKKYISERGKILPRRATGACAKHQRKITQAVNRARNMA 67
Query: 77 LIAY 80
L+ Y
Sbjct: 68 LLPY 71
>gi|326774854|ref|ZP_08234119.1| ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
gi|326655187|gb|EGE40033.1| ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
Length = 82
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL IDYKD LL RF+S RGKI R++ +S ++QR++A AIK AR + L+ Y
Sbjct: 17 PLDAAENTYIDYKDTDLLRRFVSDRGKIRGRRVTRISARQQRQVAAAIKNAREMALLPYT 76
>gi|330723815|gb|AEC46185.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis MCLD]
Length = 80
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ +L +F++ GKI PSRI+ K QR+++ AIKRAR + L+A+
Sbjct: 14 CHFCETQTVYIDYKNVEVLEKFVNPHGKIQPSRITGSCSKHQRQVSLAIKRARMIALMAF 73
Query: 81 V 81
V
Sbjct: 74 V 74
>gi|86130271|ref|ZP_01048871.1| 30S ribosomal protein S18 [Dokdonia donghaensis MED134]
gi|332293237|ref|YP_004431846.1| ribosomal protein S18 [Krokinobacter diaphorus 4H-3-7-5]
gi|85818946|gb|EAQ40105.1| 30S ribosomal protein S18 [Dokdonia donghaensis MED134]
gi|332171323|gb|AEE20578.1| ribosomal protein S18 [Krokinobacter diaphorus 4H-3-7-5]
Length = 98
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G +DYKD L F++++GK++P R++ S K QR+++ A+KRAR+L L
Sbjct: 30 KKYCRFKKSGIKYVDYKDADWLAGFVNEQGKLLPRRLTGTSLKYQRKVSVAVKRARHLAL 89
Query: 78 IAYVN 82
+ YV
Sbjct: 90 MPYVT 94
>gi|260891623|ref|ZP_05902886.1| ribosomal protein S18 [Leptotrichia hofstadii F0254]
gi|260858633|gb|EEX73133.1| ribosomal protein S18 [Leptotrichia hofstadii F0254]
Length = 79
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKRAR + L+ Y +
Sbjct: 25 INYKNVELLKNFMNDKGKISPARVTGLEAKVQRKIAKAIKRARQIALMPYTKI 77
>gi|62287445|sp|Q6YXM4|RR18_PHYPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|34494761|dbj|BAC85028.1| ribosomal protein S18 [Physcomitrella patens subsp. patens]
Length = 79
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 11 SSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIAIKRARV 68
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 69 LALLPFLN 76
>gi|256370726|ref|YP_003108551.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri SMDSEM]
gi|256009518|gb|ACU52878.1| ribosomal protein S18 [Candidatus Sulcia muelleri SMDSEM]
Length = 165
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+K C IDYK+ + L +FL++RG+I+P RI+ S K Q+ L KAIKR + +G
Sbjct: 96 EKKYCFFLKNKIKYIDYKNPKFLIKFLNERGEILPRRITGTSKKFQKRLTKAIKRCKQIG 155
Query: 77 LIAYV 81
L+ Y+
Sbjct: 156 LLPYI 160
>gi|160931686|ref|ZP_02079080.1| hypothetical protein CLOLEP_00517 [Clostridium leptum DSM 753]
gi|156869331|gb|EDO62703.1| hypothetical protein CLOLEP_00517 [Clostridium leptum DSM 753]
Length = 86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD+ L R++S+R KI+P R++ + QREL AIKRAR+L L+ +
Sbjct: 24 CGFCVDKVESIDYKDVARLRRYISERAKILPRRVTGTCARHQRELTVAIKRARHLALLPF 83
>gi|139389972|ref|YP_001123572.1| ribosomal protein S18 [Draba nemorosa]
gi|205831390|sp|A4QL41|RR18_DRANE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286774|dbj|BAF50396.1| ribosomal protein S18 [Draba nemorosa]
gi|262400742|gb|ACY66231.1| ribosomal protein S18 [Brassica napus]
Length = 101
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR +
Sbjct: 7 PFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|283782810|ref|YP_003373564.1| ribosomal protein S18 [Gardnerella vaginalis 409-05]
gi|297242912|ref|ZP_06926850.1| ribosomal protein S18 [Gardnerella vaginalis AMD]
gi|298253290|ref|ZP_06977082.1| ribosomal protein S18 [Gardnerella vaginalis 5-1]
gi|308235864|ref|ZP_07666601.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14018]
gi|311115041|ref|YP_003986262.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14019]
gi|283441410|gb|ADB13876.1| ribosomal protein S18 [Gardnerella vaginalis 409-05]
gi|296889123|gb|EFH27857.1| ribosomal protein S18 [Gardnerella vaginalis AMD]
gi|297532685|gb|EFH71571.1| ribosomal protein S18 [Gardnerella vaginalis 5-1]
gi|310946535|gb|ADP39239.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14019]
Length = 82
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++AKA+K AR + L+ Y
Sbjct: 28 IDYKDVALLRKFVSDRGKIRSRRITGVTVQEQRKIAKAVKNAREMALLPYAT 79
>gi|331268135|ref|YP_004347784.1| ribosomal protein S18 [Chlorella variabilis]
gi|325296312|gb|ADZ05032.1| ribosomal protein S18 [Chlorella variabilis]
Length = 105
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 28 APR--IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
APR IDYK+ +LL +F+S +GKI+ R + ++ K+QR +A AIKRAR GL+ +VN
Sbjct: 40 APRYTIDYKNTKLLVKFISPQGKILSRRATGLTAKQQRVMANAIKRARMGGLLPFVN 96
>gi|282862689|ref|ZP_06271750.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|282562375|gb|EFB67916.1| ribosomal protein S18 [Streptomyces sp. ACTE]
Length = 78
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR + + PL G IDYKD LL +F+S RGKI R++ VS ++QR +A A
Sbjct: 1 MTRRTDPRKPRPNPLDAAGITYIDYKDTDLLRKFVSDRGKIRSRRVTRVSARQQRHIATA 60
Query: 69 IKRARYLGLI 78
+K AR + L+
Sbjct: 61 VKNAREMALL 70
>gi|320012231|gb|ADW07081.1| ribosomal protein S18 [Streptomyces flavogriseus ATCC 33331]
Length = 77
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G +DYKD LL +F+S RGKI R++ ++ ++QR++A A+K AR + L+ Y
Sbjct: 15 PLDTAGITYVDYKDTDLLRKFVSDRGKIRSRRVTRITARQQRQVATAVKNAREMALLPY 73
>gi|313199617|ref|YP_004021233.1| ribosomal protein S18 [Isoetes flaccida]
gi|291575346|gb|ADE18059.1| ribosomal protein S18 [Isoetes flaccida]
Length = 75
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R++S P+ + +DYK+I LL F+S+RGKI+ R++ ++ K+QR + A+KRAR
Sbjct: 7 SSRKRSPPI--RSGETVDYKNISLLCGFISKRGKILSKRMNRLTSKQQRLMTIAVKRARI 64
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 65 LALLPFVN 72
>gi|222084106|ref|YP_002519559.1| ribosomal protein S18 [Keteleeria davidiana]
gi|220983658|dbj|BAH11424.1| ribosomal protein S18 [Keteleeria davidiana]
Length = 86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR+++ R+ G G RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 8 PKRSFRRHLTPIRRHLSPIGSGD-RIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLM 66
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 67 TNAIKRARILSLLPFL 82
>gi|139390370|ref|YP_001122968.1| ribosomal protein S18 [Aethionema cordifolium]
gi|205831412|sp|A4QJD7|RR18_AETCO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286163|dbj|BAF49792.1| ribosomal protein S18 [Aethionema cordifolium]
Length = 101
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFIN 79
>gi|257461419|ref|ZP_05626515.1| ribosomal protein S18 [Campylobacter gracilis RM3268]
gi|257441142|gb|EEV16289.1| ribosomal protein S18 [Campylobacter gracilis RM3268]
Length = 86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR
Sbjct: 7 YTRKYCKFTEAKIEFIDYKDTALLKHCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARQA 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|309322356|ref|YP_003934207.1| ribosomal protein S18 [Cedrus deodara]
gi|62287468|sp|Q85UZ5|RR18_LAROX RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62287469|sp|Q85UZ8|RR18_LARLA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62287470|sp|Q85V01|RR18_LARDC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30171092|gb|AAN18224.1| Rps18 [Larix sibirica]
gi|30171097|gb|AAN18227.1| Rps18 [Larix gmelinii]
gi|30171102|gb|AAN18230.1| Rps18 [Larix kaempferi]
gi|30171107|gb|AAN18233.1| Rps18 [Larix decidua]
gi|30171112|gb|AAN18236.1| Rps18 [Larix laricina]
gi|30171117|gb|AAN18239.1| Rps18 [Larix occidentalis]
gi|30171122|gb|AAN18242.1| Rps18 [Larix lyallii]
gi|30171127|gb|AAN18245.1| Rps18 [Larix potaninii]
gi|30171132|gb|AAN18248.1| Rps18 [Larix mastersiana]
gi|30171137|gb|AAN18251.1| Rps18 [Larix griffithiana]
gi|228017072|gb|ACP51894.1| ribosomal protein S18 [Cedrus deodara]
gi|228017382|gb|ACP52199.1| ribosomal protein S18 [Larix occidentalis]
gi|307683282|dbj|BAJ19590.1| ribosomal protein S18 [Cedrus deodara]
gi|307683585|dbj|BAJ19771.1| ribosomal protein S18 [Larix decidua]
Length = 86
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR+++ R+ G G RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 8 PKRSFRRHLTPIRRHLSPIGSGD-RIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLM 66
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 67 TNAIKRARILSLLPFL 82
>gi|325474233|gb|EGC77421.1| 30S ribosomal protein S18 [Treponema denticola F0402]
Length = 99
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K C + +IDYK+ L RF+++RGKI+P RI+ K QR+LA IKRAR +
Sbjct: 32 YRKKVCRFCAQKV-KIDYKEPDALRRFITERGKILPRRITGTCAKHQRKLAVEIKRARAV 90
Query: 76 GLIAYV 81
L+ +V
Sbjct: 91 ALLPFV 96
>gi|257125009|ref|YP_003163123.1| ribosomal protein S18 [Leptotrichia buccalis C-1013-b]
gi|257048948|gb|ACV38132.1| ribosomal protein S18 [Leptotrichia buccalis C-1013-b]
Length = 79
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKRAR + L+ Y +
Sbjct: 25 INYKNVELLKNFMNDKGKISPARVTGLEAKIQRKIAKAIKRARQIALMPYTKI 77
>gi|313183909|ref|YP_004021763.1| ribosomal protein S18 [Equisetum arvense]
gi|281371629|gb|ADA63562.1| ribosomal protein S18 [Equisetum arvense]
Length = 75
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++N
Sbjct: 21 IDYKNISLLRRFISEQGKILSRRLNKLTSKQQRLMTVAIKRARVLALLPFLN 72
>gi|227876513|ref|ZP_03994625.1| possible ribosomal protein S18 [Mobiluncus mulieris ATCC 35243]
gi|269977715|ref|ZP_06184675.1| ribosomal protein S18 [Mobiluncus mulieris 28-1]
gi|306817474|ref|ZP_07451218.1| 30S ribosomal protein S18 [Mobiluncus mulieris ATCC 35239]
gi|307699854|ref|ZP_07636905.1| ribosomal protein S18 [Mobiluncus mulieris FB024-16]
gi|227843054|gb|EEJ53251.1| possible ribosomal protein S18 [Mobiluncus mulieris ATCC 35243]
gi|269934019|gb|EEZ90593.1| ribosomal protein S18 [Mobiluncus mulieris 28-1]
gi|304649698|gb|EFM46979.1| 30S ribosomal protein S18 [Mobiluncus mulieris ATCC 35239]
gi|307614892|gb|EFN94110.1| ribosomal protein S18 [Mobiluncus mulieris FB024-16]
Length = 81
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K P+ IDYKD LL +F+S RGKI R++ V+ ++QR +AKA+K AR +
Sbjct: 13 RKKFTPVKAHKVGPIDYKDTALLRKFISDRGKIRARRVTGVTTQEQRLIAKAVKNAREMA 72
Query: 77 LIAY 80
L+ Y
Sbjct: 73 LLPY 76
>gi|307299235|ref|ZP_07579036.1| ribosomal protein S18 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915031|gb|EFN45417.1| ribosomal protein S18 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 77
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
L G IDYK+I LL +++++GKI+P RI+ K QR + +AI+RAR++ L+ Y
Sbjct: 17 LCGTKTTYIDYKNISLLRDYVTEKGKIIPKRITGNCAKHQRMVKEAIQRARFMALLPYT 75
>gi|215400694|ref|YP_002327457.1| ribosomal protein S18 [Vaucheria litorea]
gi|194441144|gb|ACF70872.1| ribosomal protein S18 [Vaucheria litorea]
Length = 92
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 42/51 (82%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+I LL+ FL+++GKI P R + ++ K+QR+LAK++K+AR+L L+ ++
Sbjct: 17 IDYKNIDLLHSFLNRQGKIRPRRSTKLTLKQQRKLAKSVKQARFLNLLPFI 67
>gi|325285226|ref|YP_004261016.1| 30S ribosomal protein S18 [Cellulophaga lytica DSM 7489]
gi|324320680|gb|ADY28145.1| 30S ribosomal protein S18 [Cellulophaga lytica DSM 7489]
Length = 98
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL + ++K C G +DYKD L + ++++GK++P R++ S K QR++A
Sbjct: 20 TPL-NIETNKQKKYCRFKKSGIKYVDYKDPDFLIKLVNEQGKLLPRRLTGTSLKYQRKVA 78
Query: 67 KAIKRARYLGLIAYVN 82
A+KRAR+L L+ YV
Sbjct: 79 VAVKRARHLALMPYVG 94
>gi|42527183|ref|NP_972281.1| 30S ribosomal protein S18 [Treponema denticola ATCC 35405]
gi|59798792|sp|Q73M34|RS18_TREDE RecName: Full=30S ribosomal protein S18
gi|41817607|gb|AAS12192.1| ribosomal protein S18 [Treponema denticola ATCC 35405]
Length = 89
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K C + +IDYK+ L RF+++RGKI+P RI+ K QR+LA IKRAR +
Sbjct: 22 YRKKVCRFCAQKV-KIDYKEPDALRRFITERGKILPRRITGTCAKHQRKLAVEIKRARAV 80
Query: 76 GLIAYV 81
L+ +V
Sbjct: 81 ALLPFV 86
>gi|290487240|gb|ADD30004.1| ribosomal protein S18 [Ehretia acuminata]
Length = 101
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S R++ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRKRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|166239996|gb|ABY86523.1| ribosomal protein S18 [Heliosperma alpestre]
Length = 101
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|154148306|ref|YP_001405849.1| 30S ribosomal protein S18 [Campylobacter hominis ATCC BAA-381]
gi|166220939|sp|A7I008|RS18_CAMHC RecName: Full=30S ribosomal protein S18
gi|153804315|gb|ABS51322.1| ribosomal protein S18 [Campylobacter hominis ATCC BAA-381]
Length = 87
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR
Sbjct: 7 YTRKYCKFTEAKIEFIDYKDTALLKYCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARQA 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|302330353|gb|ADL20547.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
1002]
Length = 72
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 4 SRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 63
Query: 75 LGLIAYVN 82
+ L+ + +
Sbjct: 64 MALLPFTS 71
>gi|332704307|ref|ZP_08424395.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554456|gb|EGJ51500.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis
Bay]
Length = 86
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R + R+K C IDYK+ LL F++ RGKI+ RI+ K QR L AI
Sbjct: 3 FKRRFAPRKKYCRFCADKNVAIDYKNADLLRDFITDRGKIIARRITGTCAKHQRRLTTAI 62
Query: 70 KRARYLGLIAYVN 82
KR+R + L+ Y
Sbjct: 63 KRSRQMALLFYTT 75
>gi|313679095|ref|YP_004056834.1| SSU ribosomal protein s18p [Oceanithermus profundus DSM 14977]
gi|313151810|gb|ADR35661.1| SSU ribosomal protein S18P [Oceanithermus profundus DSM 14977]
Length = 84
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD ++L RF+S+ GKI+P R + V K QR LA IKRAR L +I
Sbjct: 16 KVCQFCTGELEITDYKDAKMLKRFISETGKILPRRRTGVCAKHQRRLATTIKRARILAII 75
Query: 79 AYVN 82
+
Sbjct: 76 PFTE 79
>gi|309322155|ref|YP_003934070.1| ribosomal protein S18 [Geranium palmatum]
gi|300069248|gb|ADJ66369.1| ribosomal protein S18 [Geranium palmatum]
Length = 136
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 47/66 (71%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ K +I Y+++ L++RF+SQ+GKIV R++ ++ K+QR L AIK+AR
Sbjct: 28 SVRRRMSPIKLKRGDQIQYRNVWLISRFISQQGKIVSRRMTRLTLKQQRLLTIAIKQARI 87
Query: 75 LGLIAY 80
L L+++
Sbjct: 88 LSLLSF 93
>gi|182434342|ref|YP_001822061.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|205556519|sp|B1VRG0|RS181_STRGG RecName: Full=30S ribosomal protein S18 1
gi|113208307|dbj|BAF03512.1| putative ribosomal protein S18 [Streptomyces griseus]
gi|178462858|dbj|BAG17378.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 82
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
PL IDYKD LL RF+S RGKI R++ +S ++QR++A AIK AR + L+ Y
Sbjct: 17 PLDAAEITYIDYKDTDLLRRFVSDRGKIRGRRVTRISARQQRQVAAAIKNAREMALLPYT 76
Query: 82 N 82
Sbjct: 77 G 77
>gi|108796744|ref|YP_636554.1| ribosomal protein S18 [Zygnema circumcarinatum]
gi|122226719|sp|Q32RH2|RR18_ZYGCR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|61393728|gb|AAX45870.1| ribosomal protein S18 [Zygnema circumcarinatum]
Length = 85
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDYK++RLL RF+S++ KI+ R+S ++ K+QR +A+ IK AR L + +VN
Sbjct: 30 RIDYKNLRLLCRFVSKQAKILSRRVSRLTSKQQRTVARYIKSARVLAFMPFVN 82
>gi|186914926|gb|ACC95219.1| ribosomal protein S18 [Eudianthe laeta]
Length = 101
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILALLPFLN 79
>gi|291280361|ref|YP_003497196.1| 30S ribosomal protein S18 [Deferribacter desulfuricans SSM1]
gi|290755063|dbj|BAI81440.1| 30S ribosomal protein S18 [Deferribacter desulfuricans SSM1]
Length = 76
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C + IDYKD LL +F ++RGKI+P R++ K QR LA AIK AR +
Sbjct: 9 QRQKVCKFCTEHID-IDYKDANLLKQFTTERGKIMPRRLTGTCAKHQRRLADAIKTARIM 67
Query: 76 GLIAYV 81
L+ +
Sbjct: 68 ALLPFT 73
>gi|291296158|ref|YP_003507556.1| 30S ribosomal protein S18 [Meiothermus ruber DSM 1279]
gi|290471117|gb|ADD28536.1| ribosomal protein S18 [Meiothermus ruber DSM 1279]
Length = 92
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
D+K++ +L RFLS+ GKI+P R + ++ ++QR+LA+ IKRAR LGL+ +
Sbjct: 36 TDFKNVEVLRRFLSETGKILPRRRTGLNAQEQRKLARTIKRARMLGLLPFT 86
>gi|117929338|ref|YP_873889.1| 30S ribosomal protein S18 [Acidothermus cellulolyticus 11B]
gi|166220918|sp|A0LWU3|RS18_ACIC1 RecName: Full=30S ribosomal protein S18
gi|117649801|gb|ABK53903.1| SSU ribosomal protein S18P [Acidothermus cellulolyticus 11B]
Length = 78
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +G +DYKD LL +F+S RGKI R++ + QR++A AIK +R + L+ Y
Sbjct: 14 CVFCKEGITYVDYKDTNLLRKFISDRGKIRARRVTGNCAQHQRDVATAIKNSREMALLPY 73
Query: 81 VN 82
N
Sbjct: 74 TN 75
>gi|320449317|ref|YP_004201413.1| 30S ribosomal protein S18 [Thermus scotoductus SA-01]
gi|320149486|gb|ADW20864.1| 30S ribosomal protein S18 [Thermus scotoductus SA-01]
Length = 88
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + ++ K+QR LA+ IKRAR LGL+ +
Sbjct: 33 DYRNVEVLKRFLSETGKILPRRRTGLTAKEQRILARTIKRARILGLLPFTE 83
>gi|124302928|ref|YP_001023723.1| ribosomal protein S18 [Angiopteris evecta]
gi|205831415|sp|A2T355|RR18_ANGEV RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110628326|gb|ABG79622.1| ribosomal protein S18 [Angiopteris evecta]
Length = 75
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+I LL RF+S++GKI+ RI+ ++ K+QR + AIKRAR
Sbjct: 7 SSRRRLPPI--RSGEIIDYKNISLLRRFMSEQGKILSRRINRLTSKQQRLMTVAIKRARI 64
Query: 75 LGLIAYVN 82
L L ++N
Sbjct: 65 LALSPFLN 72
>gi|302205794|gb|ADL10136.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
C231]
gi|308276029|gb|ADO25928.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
I19]
Length = 77
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 9 SRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 68
Query: 75 LGLIAYVN 82
+ L+ + +
Sbjct: 69 MALLPFTS 76
>gi|145652240|gb|ABP88170.1| hypothetical protein [Borrelia lonestari]
Length = 124
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSG-KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K+C P DYKD L +F++ +GKI+P RI+ S K QR LA IK+ARY+
Sbjct: 59 KKKTCKFCDIDKVP--DYKDFDFLKKFITDQGKILPRRITGTSAKHQRCLALEIKKARYM 116
Query: 76 GLIAYV 81
L+ +V
Sbjct: 117 ALLPFV 122
>gi|228016567|gb|ACP51397.1| ribosomal protein S18 [Abies firma]
Length = 93
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR+++ R+ G G RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 15 PKRSFRRHLTPIRRHLSPIGSGD-RIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLM 73
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 74 TNAIKRARILSLLPFL 89
>gi|307683679|dbj|BAJ19818.1| ribosomal protein S18 [Picea morrisonicola]
Length = 93
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TP+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 TPIRRHLTPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLIT 74
Query: 67 KAIKRARYLGLIAYV 81
KAIKRAR L+ ++
Sbjct: 75 KAIKRARIPSLLPFL 89
>gi|319950955|ref|ZP_08024827.1| 30S ribosomal protein S18 [Dietzia cinnamea P4]
gi|319435377|gb|EFV90625.1| 30S ribosomal protein S18 [Dietzia cinnamea P4]
Length = 85
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A P+ +R R K PL G +DYKD+ L F+S RGKI R++ ++ ++
Sbjct: 4 ARSTPSKKIRAQEGRRPKKNPLKVAGIETVDYKDVNTLRTFISDRGKIRSRRVTGLTPQQ 63
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++A A+K AR + L+ + +
Sbjct: 64 QRQVAVAVKNAREMALLPFTS 84
>gi|300858072|ref|YP_003783055.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685526|gb|ADK28448.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
FRC41]
Length = 82
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 74 MALLPFT 80
>gi|50346804|ref|YP_053177.1| ribosomal protein S18 [Nymphaea alba]
gi|62287435|sp|Q6EW31|RR18_NYMAL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50250349|emb|CAF28615.1| ribosomal protein S18 [Nymphaea alba]
Length = 101
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+P R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 27 RIDYRNMSLISRFISEQGKILPRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|222139907|ref|YP_002519975.1| ribosomal protein S18 [Ephedra equisetina]
gi|220983576|dbj|BAH11343.1| ribosomal protein S18 [Ephedra equisetina]
Length = 97
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 45/56 (80%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
K +I+YK++ L+N+F+SQRGKI+ ++++++ K+QR ++ AIKRAR LGL+ ++
Sbjct: 34 KSENQINYKNMSLINQFISQRGKILSRKVNNLTCKQQRLISIAIKRARILGLLPFM 89
>gi|308234045|ref|ZP_07664782.1| ribosomal protein S18 [Atopobium vaginae DSM 15829]
gi|328943442|ref|ZP_08240907.1| 30S ribosomal protein S18 [Atopobium vaginae DSM 15829]
gi|327491411|gb|EGF23185.1| 30S ribosomal protein S18 [Atopobium vaginae DSM 15829]
Length = 90
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK L +DYKD +LL +F++ RGKI P R++ + + Q +A AIKRAR +
Sbjct: 13 RRKFSQLDKAELDFVDYKDTQLLRKFMTDRGKIKPRRVTGICTQHQHNVAMAIKRAREMA 72
Query: 77 LIAYV 81
L+ Y
Sbjct: 73 LLPYT 77
>gi|166235701|gb|ABY85609.1| ribosomal protein S18 [Silene conica]
Length = 98
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKQSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|38233445|ref|NP_939212.1| 30S ribosomal protein S18 [Corynebacterium diphtheriae NCTC
13129]
gi|59798749|sp|Q6NIC9|RS18_CORDI RecName: Full=30S ribosomal protein S18
gi|38199705|emb|CAE49364.1| 30S ribosomal protein S18-2 [Corynebacterium diphtheriae]
Length = 82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 74 MALLPFT 80
>gi|150387887|ref|YP_001317936.1| ribosomal protein S18 [Alkaliphilus metalliredigens QYMF]
gi|205556760|sp|A6TJA9|RS18_ALKMQ RecName: Full=30S ribosomal protein S18
gi|149947749|gb|ABR46277.1| ribosomal protein S18 [Alkaliphilus metalliredigens QYMF]
Length = 76
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +IDYK++ L +++++RGKI+P RIS QR++ +AIKR+R++ L+ Y
Sbjct: 14 CTFCADKSSKIDYKEVHKLKKYVTERGKILPRRISGNCAIHQRDITQAIKRSRHIALLPY 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|121720635|ref|YP_001001556.1| ribosomal protein S18 [Nuphar advena]
gi|69216269|gb|AAZ03915.1| ribosomal protein S18 [Nuphar advena]
gi|84682226|gb|ABC60480.1| ribosomal protein S18 [Nuphar advena]
Length = 101
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+P R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 27 RIDYRNMSLISRFISEQGKILPRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|89897780|ref|YP_521267.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense Y51]
gi|219670929|ref|YP_002461364.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense DCB-2]
gi|123091592|sp|Q24MB9|RS18_DESHY RecName: Full=30S ribosomal protein S18
gi|89337228|dbj|BAE86823.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense Y51]
gi|219541189|gb|ACL22928.1| ribosomal protein S18 [Desulfitobacterium hafniense DCB-2]
Length = 76
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD + +++++RGKI+P RIS K QR++ AIKRAR++ L+ Y
Sbjct: 14 CSFCVDKVESIDYKDTHKIRKYITERGKILPRRISGNCAKHQRQVTVAIKRARHIALLPY 73
Query: 81 V 81
+
Sbjct: 74 I 74
>gi|291545083|emb|CBL18192.1| SSU ribosomal protein S18P [Ruminococcus sp. 18P13]
Length = 80
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKDI L + ++ R KI+P R++ QREL AIKRAR++
Sbjct: 14 RKKVCMFCVDRVETIDYKDIARLRKCMTDRAKILPRRVTGTCAFHQRELTVAIKRARHIA 73
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 74 LLPYVS 79
>gi|171742016|ref|ZP_02917823.1| hypothetical protein BIFDEN_01119 [Bifidobacterium dentium ATCC
27678]
gi|283456850|ref|YP_003361414.1| 30S ribosomal protein S18 [Bifidobacterium dentium Bd1]
gi|306824380|ref|ZP_07457749.1| 30S ribosomal protein S18 [Bifidobacterium dentium ATCC 27679]
gi|309802045|ref|ZP_07696158.1| ribosomal protein S18 [Bifidobacterium dentium JCVIHMP022]
gi|171277630|gb|EDT45291.1| hypothetical protein BIFDEN_01119 [Bifidobacterium dentium ATCC
27678]
gi|283103484|gb|ADB10590.1| 30S ribosomal protein S18 [Bifidobacterium dentium Bd1]
gi|304552411|gb|EFM40329.1| 30S ribosomal protein S18 [Bifidobacterium dentium ATCC 27679]
gi|308221380|gb|EFO77679.1| ribosomal protein S18 [Bifidobacterium dentium JCVIHMP022]
Length = 82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR+++KAIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKISKAIKNAREMALLPYAT 79
>gi|269991275|emb|CAX12453.1| 30S ribosomal protein S18 [Fucus vesiculosus]
Length = 73
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K RIDYK + +L FL++ GKI P R ++++ K+QR+L+KAIK AR L L+ +V
Sbjct: 13 KSNERIDYKQVDILLSFLTEHGKIKPRRSTNLTLKQQRQLSKAIKTARSLNLLPFVT 69
>gi|288572897|ref|ZP_06391254.1| ribosomal protein S18 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568638|gb|EFC90195.1| ribosomal protein S18 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 79
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+DYKD+ L +++S+RGKIVP R++ QR+L A+KRARY+ L+ Y
Sbjct: 27 VDYKDVDRLRKYISERGKIVPRRVTGNCANHQRQLTVALKRARYMALLPY 76
>gi|156618845|ref|YP_001430127.1| ribosomal protein S18 [Cuscuta reflexa]
gi|205831387|sp|A7M985|RR18_CUSRE RecName: Full=Plastid 30S ribosomal protein S18
gi|156556030|emb|CAM98413.1| ribosomal protein S18 [Cuscuta reflexa]
Length = 109
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ K RIDY++I L++RFLS++GKI+ R+ + K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--KSGDRIDYRNISLISRFLSEQGKILSKRVHRFTLKQQRLITL 64
Query: 68 AIKRARYLGLIAYV 81
AIK+AR L L+ +
Sbjct: 65 AIKQARILSLLPFT 78
>gi|7525055|ref|NP_051081.1| ribosomal protein S18 [Arabidopsis thaliana]
gi|139387274|ref|YP_001123395.1| ribosomal protein S18 [Capsella bursa-pastoris]
gi|139388116|ref|YP_001123308.1| ribosomal protein S18 [Barbarea verna]
gi|139389118|ref|YP_001123836.1| ribosomal protein S18 [Nasturtium officinale]
gi|139389440|ref|YP_001123137.1| ribosomal protein S18 [Olimarabidopsis pumila]
gi|139389823|ref|YP_001123484.1| ribosomal protein S18 [Crucihimalaya wallichii]
gi|297840923|ref|XP_002888343.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
gi|6685922|sp|P56807|RR18_ARATH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831382|sp|A4QKV3|RR18_CRUWA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831402|sp|A4QLV5|RR18_NASOF RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831407|sp|A4QJV3|RR18_OLIPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831417|sp|A4QKC7|RR18_BARVE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831419|sp|A4QKL4|RR18_CAPBU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|5881716|dbj|BAA84407.1| ribosomal protein S18 [Arabidopsis thaliana]
gi|134286334|dbj|BAF49961.1| ribosomal protein S18 [Olimarabidopsis pumila]
gi|134286507|dbj|BAF50132.1| ribosomal protein S18 [Barbarea verna]
gi|134286595|dbj|BAF50219.1| ribosomal protein S18 [Capsella bursa-pastoris]
gi|134286685|dbj|BAF50308.1| ribosomal protein S18 [Crucihimalaya wallichii]
gi|134287041|dbj|BAF50660.1| ribosomal protein S18 [Nasturtium officinale]
gi|297334184|gb|EFH64602.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
Length = 101
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|297838029|ref|XP_002886896.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
gi|297332737|gb|EFH63155.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
Length = 101
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|300932564|ref|ZP_07147820.1| 30S ribosomal protein S18 [Corynebacterium resistens DSM 45100]
Length = 82
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL +G +DYK+ LL +F+S RGKI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAEGIETVDYKNYALLRKFISDRGKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAY 80
+ L+ +
Sbjct: 74 MALLPF 79
>gi|160944120|ref|ZP_02091350.1| hypothetical protein FAEPRAM212_01622 [Faecalibacterium
prausnitzii M21/2]
gi|313113168|ref|ZP_07798794.1| ribosomal protein S18 [Faecalibacterium cf. prausnitzii KLE1255]
gi|158444796|gb|EDP21800.1| hypothetical protein FAEPRAM212_01622 [Faecalibacterium
prausnitzii M21/2]
gi|310624507|gb|EFQ07836.1| ribosomal protein S18 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 71
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 5 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRALTIAIKRARHVA 64
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 65 LMPYVS 70
>gi|91214893|ref|ZP_01251866.1| ribosomal protein S18 [Psychroflexus torquis ATCC 700755]
gi|91187320|gb|EAS73690.1| ribosomal protein S18 [Psychroflexus torquis ATCC 700755]
Length = 98
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TPL S R C G +DYK+ L F++++GKI+P R++ S K QR+++
Sbjct: 20 TPLDIETKSKTR-FCRFKRAGIKYVDYKNADFLMEFVNEQGKILPRRLTGTSLKYQRKVS 78
Query: 67 KAIKRARYLGLIAYV 81
+AIKR+R+L L+ YV
Sbjct: 79 QAIKRSRHLALMPYV 93
>gi|163847275|ref|YP_001635319.1| 30S ribosomal protein S18 [Chloroflexus aurantiacus J-10-fl]
gi|222525118|ref|YP_002569589.1| 30S ribosomal protein S18 [Chloroflexus sp. Y-400-fl]
gi|189029670|sp|A9WCD9|RS18_CHLAA RecName: Full=30S ribosomal protein S18
gi|254765420|sp|B9LER9|RS18_CHLSY RecName: Full=30S ribosomal protein S18
gi|163668564|gb|ABY34930.1| ribosomal protein S18 [Chloroflexus aurantiacus J-10-fl]
gi|222448997|gb|ACM53263.1| ribosomal protein S18 [Chloroflexus sp. Y-400-fl]
Length = 81
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 17 RRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ C + G P DYKD++ L ++L+ +GKI+P R + VS K QR LA AIKRAR+L
Sbjct: 13 RRRECEFTKLGIVP--DYKDVKRLQKYLTAQGKILPRRRTGVSAKMQRRLAVAIKRARHL 70
Query: 76 GLI 78
L+
Sbjct: 71 ALL 73
>gi|203284038|ref|YP_002221778.1| 30S ribosomal protein S18 [Borrelia duttonii Ly]
gi|203287580|ref|YP_002222595.1| 30S ribosomal protein S18 [Borrelia recurrentis A1]
gi|229559963|sp|B5RLI7|RS18_BORDL RecName: Full=30S ribosomal protein S18
gi|229559966|sp|B5RQU0|RS18_BORRA RecName: Full=30S ribosomal protein S18
gi|201083481|gb|ACH93072.1| 30S ribosomal protein S18 [Borrelia duttonii Ly]
gi|201084800|gb|ACH94374.1| 30S ribosomal protein S18 [Borrelia recurrentis A1]
Length = 96
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSGKGAPRI-DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K+C R+ DYK+ L +F++++GKI+P RI+ S K QR LA IK+ARY+
Sbjct: 31 KKKTCKFCD--MDRVPDYKEFDFLKKFITEQGKILPRRITGTSAKHQRRLALEIKKARYM 88
Query: 76 GLIAYV 81
L+ +V
Sbjct: 89 ALLPFV 94
>gi|255628869|gb|ACU14779.1| unknown [Glycine max]
Length = 96
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYKNMGLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|256829608|ref|YP_003158336.1| 30S riboosomal protein S18 [Desulfomicrobium baculatum DSM 4028]
gi|256578784|gb|ACU89920.1| ribosomal protein S18 [Desulfomicrobium baculatum DSM 4028]
Length = 87
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +LN F++ RGKI+ SRI+ K QR L + +
Sbjct: 3 FKKKFAPRRKYCRFCENPEILLDYKHPEVLNDFVTDRGKIIASRITGTCAKHQRALTREV 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALMFYT 74
>gi|187917991|ref|YP_001883554.1| 30S ribosomal protein S18 [Borrelia hermsii DAH]
gi|229559964|sp|B2S1U7|RS18_BORHD RecName: Full=30S ribosomal protein S18
gi|119860839|gb|AAX16634.1| SSU ribosomal protein S18P [Borrelia hermsii DAH]
Length = 96
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSGKGAPRI-DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K+C R+ DYK+ L +F++++GKI+P RI+ S K QR LA IK+ARY+
Sbjct: 31 KKKTCKFCD--MDRVPDYKEFDFLKKFITEQGKILPRRITGTSAKHQRRLALEIKKARYM 88
Query: 76 GLIAYV 81
L+ +V
Sbjct: 89 ALLPFV 94
>gi|81176272|ref|YP_398351.1| ribosomal protein S18 [Lactuca sativa]
gi|122248966|sp|Q332V6|RR18_LACSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|78675190|dbj|BAE47616.1| chloroplast 30S ribosomal protein S18 [Lactuca sativa]
gi|88657005|gb|ABD47255.1| ribosomal protein S18 [Lactuca sativa]
Length = 101
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|324986433|ref|YP_004276304.1| ribosomal protein S18 [Pinus monophylla]
gi|228016064|gb|ACP50902.1| ribosomal protein S18 [Pinus rzedowskii]
gi|323522528|gb|ADX94870.1| ribosomal protein S18 [Pinus monophylla]
Length = 93
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|219848368|ref|YP_002462801.1| 30S ribosomal protein S18 [Chloroflexus aggregans DSM 9485]
gi|254765419|sp|B8G975|RS18_CHLAD RecName: Full=30S ribosomal protein S18
gi|219542627|gb|ACL24365.1| ribosomal protein S18 [Chloroflexus aggregans DSM 9485]
Length = 81
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 17 RRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ C + G P DYKD++ L ++L+ +GKI+P R + VS K QR LA AIKRAR+L
Sbjct: 13 RRRECEFTKLGIVP--DYKDVKRLQKYLTAQGKILPRRRTGVSAKMQRRLAVAIKRARHL 70
Query: 76 GLI 78
L+
Sbjct: 71 ALL 73
>gi|197131550|gb|ACH47293.1| ribosomal protein S18 [Geranium palmatum]
Length = 136
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ K +I Y+++ L++RF+SQ+GKIV R++ ++ K+QR L
Sbjct: 21 PFGKKKRSVRRRMSPIKLKRGDQIQYRNVWLISRFISQQGKIVSRRMTRLTLKQQRLLTI 80
Query: 68 AIKRARYLGLIAY 80
AIK+AR L L+++
Sbjct: 81 AIKQARILSLLSF 93
>gi|108761622|ref|YP_633233.1| 30S ribosomal protein S18 [Myxococcus xanthus DK 1622]
gi|123074131|sp|Q1D290|RS18_MYXXD RecName: Full=30S ribosomal protein S18
gi|108465502|gb|ABF90687.1| ribosomal protein S18 [Myxococcus xanthus DK 1622]
Length = 131
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +D+KD L F+++RGKI+P RIS K QRE+A AIKRAR + L+ Y
Sbjct: 67 CRFCAEKNASVDFKDQATLKYFVTERGKIIPRRISGNCAKHQREVAVAIKRARGIALLPY 126
>gi|258655464|ref|YP_003204620.1| 30S ribosomal protein S18 [Nakamurella multipartita DSM 44233]
gi|258558689|gb|ACV81631.1| ribosomal protein S18 [Nakamurella multipartita DSM 44233]
Length = 78
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + A IDYKD LL RF+S RGKI R++ + QR++A A+K AR + L+ Y
Sbjct: 14 CAFCKENAQPIDYKDTTLLRRFISDRGKIRARRVTGNCTQHQRDIATAVKNAREVALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|237688594|ref|YP_002905211.1| ribosomal protein S18 [Pinus gerardiana]
gi|237688662|ref|YP_002905278.1| ribosomal protein S18 [Pinus krempfii]
gi|324986361|ref|YP_004276233.1| ribosomal protein S18 [Pinus lambertiana]
gi|62287473|sp|Q85X35|RR18_PINKO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|29469700|gb|AAO74028.1| ribosomal protein S18 [Pinus koraiensis]
gi|226876055|gb|ACO89311.1| ribosomal protein S18 [Pinus gerardiana]
gi|226951120|gb|ACO94183.1| ribosomal protein S18 [Pinus krempfii]
gi|228016185|gb|ACP51021.1| ribosomal protein S18 [Pinus squamata]
gi|228016249|gb|ACP51084.1| ribosomal protein S18 [Pinus strobus]
gi|228016626|gb|ACP51455.1| ribosomal protein S18 [Pinus albicaulis]
gi|228016759|gb|ACP51586.1| ribosomal protein S18 [Pinus armandii]
gi|228016882|gb|ACP51707.1| ribosomal protein S18 [Pinus ayacahuite]
gi|228017129|gb|ACP51950.1| ribosomal protein S18 [Pinus cembra]
gi|228017250|gb|ACP52069.1| ribosomal protein S18 [Pinus flexilis]
gi|228017316|gb|ACP52134.1| ribosomal protein S18 [Pinus lambertiana]
gi|228017509|gb|ACP52324.1| ribosomal protein S18 [Pinus monticola]
gi|228017572|gb|ACP52386.1| ribosomal protein S18 [Pinus parviflora var. pentaphylla]
gi|228017636|gb|ACP52449.1| ribosomal protein S18 [Pinus peuce]
gi|257042531|gb|ACV32805.1| ribosomal protein S18 [Pinus monticola]
gi|257042559|gb|ACV32832.1| ribosomal protein S18 [Pinus monticola]
gi|257042589|gb|ACV32861.1| ribosomal protein S18 [Pinus monticola]
gi|257042618|gb|ACV32889.1| ribosomal protein S18 [Pinus monticola]
gi|257042674|gb|ACV32943.1| ribosomal protein S18 [Pinus monticola]
gi|257042704|gb|ACV32972.1| ribosomal protein S18 [Pinus monticola]
gi|257042758|gb|ACV33024.1| ribosomal protein S18 [Pinus monticola]
gi|257042786|gb|ACV33051.1| ribosomal protein S18 [Pinus monticola]
gi|323514210|gb|ADX89757.1| ribosomal protein S18 [Pinus lambertiana]
Length = 93
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|303232318|ref|ZP_07319013.1| ribosomal protein S18 [Atopobium vaginae PB189-T1-4]
gi|302481575|gb|EFL44640.1| ribosomal protein S18 [Atopobium vaginae PB189-T1-4]
Length = 90
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RK L +DYKD +LL +F++ RGKI P R++ + + Q +A AIKRAR + L
Sbjct: 14 RKYSQLDKAELDNVDYKDTQLLRKFMTDRGKIKPRRVTGICTQHQHNVAMAIKRAREMAL 73
Query: 78 IAYV 81
+ Y
Sbjct: 74 LPYT 77
>gi|312138605|ref|YP_004005941.1| 30S ribosomal protein s18 rpsr [Rhodococcus equi 103S]
gi|325676329|ref|ZP_08156008.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
gi|311887944|emb|CBH47256.1| 30S ribosomal protein S18 RpsR [Rhodococcus equi 103S]
gi|325552890|gb|EGD22573.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
Length = 84
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K PL G +DYKD+ LL F+S RGKI R++ ++ ++QR++A A+K AR +
Sbjct: 18 RPKKNPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMA 77
Query: 77 LIAYVN 82
L+ + +
Sbjct: 78 LLPFTS 83
>gi|295105039|emb|CBL02583.1| SSU ribosomal protein S18P [Faecalibacterium prausnitzii SL3/3]
Length = 85
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 19 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRALTIAIKRARHVA 78
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 79 LMPYVS 84
>gi|295100600|emb|CBK98145.1| SSU ribosomal protein S18P [Faecalibacterium prausnitzii L2-6]
Length = 85
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 19 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAFHQRALTVAIKRARHVA 78
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 79 LMPYVS 84
>gi|197131548|gb|ACH47292.1| ribosomal protein S18 [Geranium macrorrhizum]
Length = 123
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 47/66 (71%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ K +I Y+++ L++RF+SQ+GKI+ R++ ++ K+QR L AIK+AR
Sbjct: 29 SVRRRVSPIKLKRGDQIQYRNVWLISRFISQQGKILSRRVTRLTLKQQRLLTIAIKQARI 88
Query: 75 LGLIAY 80
L L+++
Sbjct: 89 LSLLSF 94
>gi|222823954|ref|YP_002575528.1| 30S ribosomal protein S18 [Campylobacter lari RM2100]
gi|254765417|sp|B9KCI8|RS18_CAMLR RecName: Full=30S ribosomal protein S18
gi|222539176|gb|ACM64277.1| 30S ribosomal protein S18 [Campylobacter lari RM2100]
Length = 86
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 7 YSRKYCKYTEAKVDFIDYKDTALLKHALSERFKIMPRRLTGTSKKHQEMVEIAIKRARHV 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|294791319|ref|ZP_06756476.1| ribosomal protein S18 [Scardovia inopinata F0304]
gi|294457790|gb|EFG26144.1| ribosomal protein S18 [Scardovia inopinata F0304]
Length = 85
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKD+ LL +F+S RGKI RI+ V+ ++QR +A+AIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRTIARAIKNAREMALLPY 77
>gi|172072893|ref|YP_001806654.1| ribosomal protein S18 [Cryptomeria japonica]
gi|205831383|sp|B1VKE1|RR18_CRYJA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|171854912|dbj|BAG16652.1| ribosomal protein S18 [Cryptomeria japonica]
gi|239794281|dbj|BAH73278.1| ribosomal protein S18 [Cryptomeria japonica]
gi|239794363|dbj|BAH73359.1| ribosomal protein S18 [Cryptomeria japonica]
Length = 116
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 43/53 (81%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
IDYK+I L+NRF+S++GKI+ R + ++ K+QR +A+A+K+AR L LI +++L
Sbjct: 63 IDYKNISLINRFISEQGKILSRRTNRLALKQQRLIARAVKQARILCLIPFLSL 115
>gi|260587267|ref|ZP_05853180.1| ribosomal protein S18 [Blautia hansenii DSM 20583]
gi|331083585|ref|ZP_08332696.1| hypothetical protein HMPREF0992_01620 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542462|gb|EEX23031.1| ribosomal protein S18 [Blautia hansenii DSM 20583]
gi|330403796|gb|EGG83348.1| hypothetical protein HMPREF0992_01620 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 87
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G+ I YKD L R++S+RGKI+P RI+ K QR L IK+AR+L ++ Y
Sbjct: 25 CVFCGQENNEISYKDANKLKRYVSERGKILPRRITGNCAKHQRALTVEIKKARHLAIMPY 84
Query: 81 V 81
V
Sbjct: 85 V 85
>gi|297618489|ref|YP_003703648.1| ribosomal protein S18 [Syntrophothermus lipocalidus DSM 12680]
gi|297146326|gb|ADI03083.1| ribosomal protein S18 [Syntrophothermus lipocalidus DSM 12680]
Length = 74
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD L R++++RGKI+P RI+ K QR L AIKRAR + L+
Sbjct: 11 QCNFCAEKIENIDYKDAARLRRYITERGKILPRRITGNCAKHQRRLTTAIKRAREMALLP 70
Query: 80 YV 81
+
Sbjct: 71 FT 72
>gi|227548279|ref|ZP_03978328.1| 30S ribosomal protein S18 [Corynebacterium lipophiloflavum DSM
44291]
gi|227079597|gb|EEI17560.1| 30S ribosomal protein S18 [Corynebacterium lipophiloflavum DSM
44291]
Length = 83
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL +G ++DYKD++ L F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 15 SRRPKKNPLKAEGIEKVDYKDVKTLRLFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 74
Query: 75 LGLIAYVN 82
+ L+ + +
Sbjct: 75 MALLPFTS 82
>gi|292559530|ref|YP_003540953.1| 30S ribosomal protein S18 [Phoenix dactylifera]
gi|156598178|gb|ABU85353.1| ribosomal protein S18 [Elaeis oleifera]
gi|290790938|gb|ADD63193.1| 30S ribosomal protein S18 [Phoenix dactylifera]
gi|294620599|gb|ADF28168.1| 30S ribosomal protein S18 [Phoenix dactylifera]
Length = 101
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLSPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNKLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|324986504|ref|YP_004276374.1| ribosomal protein S18 [Pinus nelsonii]
gi|323522692|gb|ADX94940.1| ribosomal protein S18 [Pinus nelsonii]
Length = 93
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|193237750|dbj|BAG50147.1| ribosomal protein S18 [Takakia lepidozioides]
gi|193237760|dbj|BAG50154.1| ribosomal protein S18 [Takakia lepidozioides]
Length = 75
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + +DYK+I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 7 SSRRRLPPI--RSGDILDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIAIKRARV 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LALLPFLN 72
>gi|28493073|ref|NP_787234.1| 30S ribosomal protein S18 [Tropheryma whipplei str. Twist]
gi|28572281|ref|NP_789061.1| 30S ribosomal protein S18 [Tropheryma whipplei TW08/27]
gi|59798890|sp|Q83GX3|RS18_TROWT RecName: Full=30S ribosomal protein S18
gi|59798893|sp|Q83IC1|RS18_TROW8 RecName: Full=30S ribosomal protein S18
gi|28410412|emb|CAD66798.1| 30s ribosomal protein S18 [Tropheryma whipplei TW08/27]
gi|28476113|gb|AAO44203.1| 30S ribosomal protein S18 [Tropheryma whipplei str. Twist]
Length = 83
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+DYKD+ L RFLS RGKI R++ S ++QR++AKAIK AR +G+I +
Sbjct: 28 LDYKDLASLKRFLSDRGKIRARRVTGASIQQQRQIAKAIKNAREMGVIPF 77
>gi|228017187|gb|ACP52007.1| ribosomal protein S18 [Pinus leiophylla var. chihuahuana]
Length = 100
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|146216939|ref|NP_817180.2| ribosomal protein S18 [Pinus koraiensis]
Length = 89
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 23 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 80
Query: 77 LIAYV 81
L+ ++
Sbjct: 81 LLPFL 85
>gi|330850652|ref|YP_004376533.1| ribosomal protein S18 [Ptilidium pulcherrimum]
gi|302024781|gb|ADK89627.1| ribosomal protein S18 [Ptilidium pulcherrimum]
Length = 75
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK++ LL RF+S++GKI+ R + ++ K+QR L AIKRAR L L+ + N
Sbjct: 21 IDYKNVSLLRRFISEQGKILSRRTNRLTSKQQRLLTLAIKRARVLALLPFTN 72
>gi|300781695|ref|ZP_07091549.1| 30S ribosomal protein S18 [Corynebacterium genitalium ATCC 33030]
gi|300533402|gb|EFK54463.1| 30S ribosomal protein S18 [Corynebacterium genitalium ATCC 33030]
Length = 82
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL KG +DYKDI L F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 14 SRRPKKNPLKAKGIEAVDYKDIETLRLFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 73
Query: 75 LGLIAYV 81
+ L+ +
Sbjct: 74 MALLPFT 80
>gi|154174830|ref|YP_001407994.1| 30S ribosomal protein S18 [Campylobacter curvus 525.92]
gi|166220937|sp|A7GXQ2|RS18_CAMC5 RecName: Full=30S ribosomal protein S18
gi|112803289|gb|EAU00633.1| ribosomal protein S18 [Campylobacter curvus 525.92]
Length = 86
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S K Q + KAIKRAR+
Sbjct: 7 YSRKYCKYTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAIKRARHA 66
Query: 76 GLIAYV 81
+I Y+
Sbjct: 67 AIIPYI 72
>gi|313183844|ref|YP_004021687.1| ribosomal protein S18 [Prunus persica]
gi|309321456|gb|ADO64997.1| ribosomal protein S18 [Prunus persica]
Length = 100
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
LL+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 LLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|317126703|ref|YP_004100815.1| 30S ribosomal protein S18P [Intrasporangium calvum DSM 43043]
gi|315590791|gb|ADU50088.1| SSU ribosomal protein S18P [Intrasporangium calvum DSM 43043]
Length = 78
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR + L+ Y
Sbjct: 15 PLKAAKVENIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIATAVKNAREMALLPY 73
>gi|166235877|gb|ABY85777.1| ribosomal protein S18 [Silene atocioides]
Length = 101
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|228016693|gb|ACP51521.1| ribosomal protein S18 [Pinus aristata]
Length = 93
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|237688525|ref|YP_002905143.1| ribosomal protein S18 [Pinus contorta]
gi|226875354|gb|ACO89092.1| ribosomal protein S18 [Pinus contorta]
Length = 100
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|261338591|ref|ZP_05966475.1| ribosomal protein S18 [Bifidobacterium gallicum DSM 20093]
gi|270276626|gb|EFA22480.1| ribosomal protein S18 [Bifidobacterium gallicum DSM 20093]
Length = 82
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++A AIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPYAT 79
>gi|183602723|ref|ZP_02964086.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683176|ref|YP_002469559.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191511|ref|YP_002968905.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196916|ref|YP_002970471.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183217961|gb|EDT88609.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620826|gb|ACL28983.1| ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249903|gb|ACS46843.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251470|gb|ACS48409.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289177636|gb|ADC84882.1| SSU ribosomal protein S18P [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295794503|gb|ADG34038.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
V9]
Length = 82
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++A AIK AR + L+ Y
Sbjct: 28 IDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPYAT 79
>gi|228016822|gb|ACP51648.1| ribosomal protein S18 [Pinus attenuata]
gi|228016946|gb|ACP51770.1| ribosomal protein S18 [Pinus banksiana]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|228015996|gb|ACP50835.1| ribosomal protein S18 [Pinus resinosa]
gi|228016380|gb|ACP51213.1| ribosomal protein S18 [Pinus thunbergii]
gi|228017010|gb|ACP51833.1| ribosomal protein S18 [Pinus canariensis]
gi|228017449|gb|ACP52265.1| ribosomal protein S18 [Pinus merkusii]
gi|228017702|gb|ACP52514.1| ribosomal protein S18 [Pinus pinaster]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|166235657|gb|ABY85567.1| ribosomal protein S18 [Silene sorensenis]
Length = 101
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|166235569|gb|ABY85483.1| ribosomal protein S18 [Silene samia]
gi|166235613|gb|ABY85525.1| ribosomal protein S18 [Silene uniflora]
gi|166235635|gb|ABY85546.1| ribosomal protein S18 [Silene zawadskii]
gi|166235723|gb|ABY85630.1| ribosomal protein S18 [Silene latifolia]
gi|166235767|gb|ABY85672.1| ribosomal protein S18 [Silene sordida]
gi|166235811|gb|ABY85714.1| ribosomal protein S18 [Silene pseudoatocion]
Length = 101
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|296134460|ref|YP_003641707.1| ribosomal protein S18 [Thermincola sp. JR]
gi|296033038|gb|ADG83806.1| ribosomal protein S18 [Thermincola potens JR]
Length = 76
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD L +++++RGKI+P RIS K QR+L AIKRAR++ L+ +
Sbjct: 14 CSFCVDKVEAIDYKDSAKLRKYITERGKILPRRISGNCAKHQRQLTTAIKRARHMALLPF 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|260905003|ref|ZP_05913325.1| SSU ribosomal protein S18P [Brevibacterium linens BL2]
Length = 79
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P +R+ + ++K+ PL A +I YKD L +F+S RGKI R++ V+ ++QR +AK
Sbjct: 4 PEIRKPI--KKKANPLKKGEAAKIHYKDTATLRKFISDRGKIRARRVTGVTVQEQRVIAK 61
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 62 AVKNAREMALLPY 74
>gi|313894855|ref|ZP_07828415.1| ribosomal protein S18 [Selenomonas sp. oral taxon 137 str. F0430]
gi|320530237|ref|ZP_08031307.1| ribosomal protein S18 [Selenomonas artemidis F0399]
gi|312976536|gb|EFR41991.1| ribosomal protein S18 [Selenomonas sp. oral taxon 137 str. F0430]
gi|320137670|gb|EFW29582.1| ribosomal protein S18 [Selenomonas artemidis F0399]
Length = 77
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RF ++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCSFCVDKVDHIDYKDAAKLRRFTTERGKILPRRISGNCAKHQRQVTLAIKRARNIALL 72
Query: 79 AYV 81
+
Sbjct: 73 PFT 75
>gi|228016447|gb|ACP51279.1| ribosomal protein S18 [Pinus torreyana subsp. insularis]
gi|228016511|gb|ACP51342.1| ribosomal protein S18 [Pinus torreyana subsp. torreyana]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|228016309|gb|ACP51143.1| ribosomal protein S18 [Pinus taeda]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|228015927|gb|ACP50767.1| ribosomal protein S18 [Pinus ponderosa]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|7524804|ref|NP_045806.1| ribosomal protein S18 [Chlorella vulgaris]
gi|3024563|sp|P56353|RR18_CHLVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|2224397|dbj|BAA57881.1| 30S ribosomal protein S18 [Chlorella vulgaris]
Length = 103
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Query: 23 LSGKGAPR----IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+S G P IDYK+ +LL +F+S +GKI+ R + ++ K+QR +A AIKRAR GL+
Sbjct: 33 ISNTGEPASRYIIDYKNTQLLVKFISPQGKILSRRATGLTAKQQRIMANAIKRARMGGLV 92
Query: 79 AYVN 82
+VN
Sbjct: 93 PFVN 96
>gi|30352055|ref|NP_848082.1| ribosomal protein S18 [Adiantum capillus-veneris]
gi|62287465|sp|Q85FK0|RR18_ADICA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30266734|gb|AAP29413.1| ribosomal protein S18 [Adiantum capillus-veneris]
Length = 75
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ LL RF+S++GKI+ R++ ++ K+QR +A AIKRAR L L+ + N
Sbjct: 21 IDYKNTSLLRRFVSEQGKILSRRMNRLTSKQQRLIATAIKRARILALLPFSN 72
>gi|1262627|dbj|BAA04344.1| ribosomal protein S18 [Pinus thunbergii]
Length = 100
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 34 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 91
Query: 77 LIAYV 81
L+ ++
Sbjct: 92 LLPFL 96
>gi|309811311|ref|ZP_07705098.1| ribosomal protein S18 [Dermacoccus sp. Ellin185]
gi|308434618|gb|EFP58463.1| ribosomal protein S18 [Dermacoccus sp. Ellin185]
Length = 78
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR + L+ Y
Sbjct: 15 PLKAAKVENIDYKDAALLRKFISDRGKIRARRVTGVSVQEQRLIANAVKNAREMALLPY 73
>gi|57167956|ref|ZP_00367095.1| ribosomal protein S18 [Campylobacter coli RM2228]
gi|305431894|ref|ZP_07401061.1| 30S ribosomal protein S18 [Campylobacter coli JV20]
gi|57020330|gb|EAL56999.1| ribosomal protein S18 [Campylobacter coli RM2228]
gi|304444978|gb|EFM37624.1| 30S ribosomal protein S18 [Campylobacter coli JV20]
gi|315932207|gb|EFV11150.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 327]
Length = 86
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD +L LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 7 YSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVEVAIKRARHV 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|327399727|ref|YP_004340596.1| 30S ribosomal protein S18 [Hippea maritima DSM 10411]
gi|327182356|gb|AEA34537.1| 30S ribosomal protein S18 [Hippea maritima DSM 10411]
Length = 86
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKDI LL+R++++R KIV + ++ + QR L KAIKRAR +
Sbjct: 15 KKKVCHFCTNKIEEIDYKDIDLLSRYVTERYKIVGRKTTATCARHQRMLTKAIKRARVMA 74
Query: 77 LIAYV 81
L+ +
Sbjct: 75 LMPFT 79
>gi|157164150|ref|YP_001467166.1| 30S ribosomal protein S18 [Campylobacter concisus 13826]
gi|166220936|sp|A7ZEF8|RS18_CAMC1 RecName: Full=30S ribosomal protein S18
gi|112801371|gb|EAT98715.1| ribosomal protein S18 [Campylobacter concisus 13826]
Length = 86
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD LL LS+R KI+P R++ S + Q + KAIKRAR+
Sbjct: 7 YSRKYCKFTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKRYQEMVEKAIKRARHA 66
Query: 76 GLIAYV 81
+I Y+
Sbjct: 67 AIIPYI 72
>gi|57237954|ref|YP_179203.1| 30S ribosomal protein S18 [Campylobacter jejuni RM1221]
gi|86150494|ref|ZP_01068719.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86150979|ref|ZP_01069195.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153056|ref|ZP_01071261.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88596231|ref|ZP_01099468.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613108|ref|YP_001000750.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926025|ref|ZP_01809711.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|153951708|ref|YP_001397812.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415333|ref|YP_001482589.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81116]
gi|167005670|ref|ZP_02271428.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81-176]
gi|218562686|ref|YP_002344465.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|283954635|ref|ZP_06372153.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 414]
gi|283956469|ref|ZP_06373949.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
1336]
gi|6226083|sp|O69301|RS18_CAMJE RecName: Full=30S ribosomal protein S18
gi|81675575|sp|Q5HU32|RS18_CAMJR RecName: Full=30S ribosomal protein S18
gi|166220940|sp|A7H2T2|RS18_CAMJD RecName: Full=30S ribosomal protein S18
gi|166220941|sp|A1W059|RS18_CAMJJ RecName: Full=30S ribosomal protein S18
gi|172047141|sp|A8FMC5|RS18_CAMJ8 RecName: Full=30S ribosomal protein S18
gi|3114757|emb|CAA76673.1| ribosomal protein S18 [Campylobacter jejuni]
gi|57166758|gb|AAW35537.1| ribosomal protein S18 [Campylobacter jejuni RM1221]
gi|85839089|gb|EAQ56353.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85842149|gb|EAQ59395.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843941|gb|EAQ61151.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249144|gb|EAQ72105.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191072|gb|EAQ95044.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360392|emb|CAL35189.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145845504|gb|EDK22596.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|152939154|gb|ABS43895.1| ribosomal protein S18 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386297|gb|ABV52612.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792189|gb|EFC30978.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
1336]
gi|283793827|gb|EFC32578.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 414]
gi|284926301|gb|ADC28653.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307747974|gb|ADN91244.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni M1]
gi|315058513|gb|ADT72842.1| SSU ribosomal protein S18p [Campylobacter jejuni subsp. jejuni
S3]
gi|315927920|gb|EFV07242.1| Ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928748|gb|EFV08023.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 305]
Length = 86
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD +L LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 7 YSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVEVAIKRARHV 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|227501463|ref|ZP_03931512.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49725]
gi|255324827|ref|ZP_05365940.1| ribosomal protein S18 [Corynebacterium tuberculostearicum SK141]
gi|306835624|ref|ZP_07468633.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49726]
gi|311740881|ref|ZP_07714708.1| 30S ribosomal protein S18 [Corynebacterium pseudogenitalium ATCC
33035]
gi|227077488|gb|EEI15451.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49725]
gi|255298127|gb|EET77431.1| ribosomal protein S18 [Corynebacterium tuberculostearicum SK141]
gi|304568468|gb|EFM44024.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49726]
gi|311304401|gb|EFQ80477.1| 30S ribosomal protein S18 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 84
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R S R K PL +G ++DYKD + L F+S R KI R++ ++ ++QR++A A+
Sbjct: 11 FRMEQSRRPKKNPLKAEGIEKVDYKDTKTLRLFISDRHKIRSRRVTGLTPQQQRQVATAV 70
Query: 70 KRARYLGLIAYV 81
K AR + L+ +
Sbjct: 71 KNAREMALLPFT 82
>gi|187763123|ref|YP_001876598.1| ribosomal protein S18 [Welwitschia mirabilis]
gi|163311653|gb|ABY26811.1| ribosomal protein S18 [Welwitschia mirabilis]
gi|220983438|dbj|BAH11207.1| ribosomal protein S18 [Welwitschia mirabilis]
Length = 192
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P+ K +I+YK++ L+NR++SQ+GKI+ +++ ++ K+QR +A AIKRAR L + +
Sbjct: 92 PIQIKSEDQINYKNVNLINRYISQQGKILSRKVNKLTWKQQRLMAVAIKRARILSFLPFT 151
>gi|313672482|ref|YP_004050593.1| SSU ribosomal protein s18p [Calditerrivibrio nitroreducens DSM
19672]
gi|312939238|gb|ADR18430.1| SSU ribosomal protein S18P [Calditerrivibrio nitroreducens DSM
19672]
Length = 76
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++KSC IDYKD LL +F+++RGKI+P R++ K QR LA AIK AR +
Sbjct: 9 QKKKSCRFCTDKIE-IDYKDSVLLRQFVTERGKILPRRLTGTCTKHQRRLATAIKTARII 67
Query: 76 GLIAY 80
L+ +
Sbjct: 68 ALLPF 72
>gi|149390562|ref|YP_001294206.1| ribosomal protein S18 [Buxus microphylla]
gi|205831418|sp|A6MM58|RR18_BUXMI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|146762307|gb|ABQ45271.1| ribosomal protein S18 [Buxus microphylla]
Length = 103
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI-GSG-DRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|156618925|ref|YP_001430061.1| ribosomal protein S18 [Cuscuta gronovii]
gi|205831385|sp|A7M919|RR18_CUSGR RecName: Full=Plastid 30S ribosomal protein S18
gi|156555963|emb|CAM98347.1| ribosomal protein S18 [Cuscuta gronovii]
Length = 142
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ RIDY++I LL RF+SQ+GKI+ R++ ++ K+QR L AIK+AR L + + N
Sbjct: 23 QSGDRIDYQNIDLLRRFISQQGKILSRRVTRLTLKQQRLLNLAIKQARILSFLPFTN 79
>gi|313836466|gb|EFS74180.1| ribosomal protein S18 [Propionibacterium acnes HL037PA2]
gi|314928921|gb|EFS92752.1| ribosomal protein S18 [Propionibacterium acnes HL044PA1]
gi|314971088|gb|EFT15186.1| ribosomal protein S18 [Propionibacterium acnes HL037PA3]
gi|328906632|gb|EGG26407.1| 30S ribosomal protein S18 [Propionibacterium sp. P08]
Length = 79
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGKI R++ +S + QR++A AIK
Sbjct: 5 QRKTVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|295093121|emb|CBK82212.1| SSU ribosomal protein S18P [Coprococcus sp. ART55/1]
Length = 87
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A P+ RRN+ R+K C IDYKD L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADAPMKRRNIRRRKKVCEYCANKEAVIDYKDSNALRKYISERGKILPRRITGTCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYVN 82
+ A+KRAR + ++ YV
Sbjct: 69 ITIAVKRARQIAILPYVQ 86
>gi|146216938|ref|NP_042387.2| ribosomal protein S18 [Pinus thunbergii]
gi|62297524|sp|P52763|RR18_PINTH RecName: Full=30S ribosomal protein S18, chloroplastic
Length = 96
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 30 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 87
Query: 77 LIAYV 81
L+ ++
Sbjct: 88 LLPFL 92
>gi|147679225|ref|YP_001213440.1| 30S ribosomal protein S18 [Pelotomaculum thermopropionicum SI]
gi|205616629|sp|A5CY50|RS18_PELTS RecName: Full=30S ribosomal protein S18
gi|146275322|dbj|BAF61071.1| ribosomal protein S18 [Pelotomaculum thermopropionicum SI]
Length = 76
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C A +DYKD++ L +++++RGKI+P RIS K QR L AIKRAR +
Sbjct: 10 KKRICNFCVDKAEVVDYKDVQRLKKYITERGKILPRRISGNCAKHQRLLTTAIKRARNIA 69
Query: 77 LIAYV 81
L+ +
Sbjct: 70 LLPFT 74
>gi|308746053|ref|YP_003934580.1| ribosomal protein S18 [Cheilanthes lindheimeri]
gi|302375486|gb|ADL29860.1| ribosomal protein S18 [Cheilanthes lindheimeri]
Length = 75
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK+ LL RFLS++GKI+ R++ ++ K+QR +A A+KRAR L L+ + N
Sbjct: 21 VDYKNTSLLRRFLSEQGKILSRRMNRLTSKQQRLVATAVKRARILALLPFSN 72
>gi|108802664|ref|YP_636320.1| ribosomal protein S18 [Eucalyptus globulus subsp. globulus]
gi|309322468|ref|YP_003933981.1| ribosomal protein S18 [Eucalyptus grandis]
gi|122227187|sp|Q49KX7|RR18_EUCGG RecName: Full=30S ribosomal protein S18, chloroplastic
gi|60460830|gb|AAX21050.1| ribosomal protein S18 [Eucalyptus globulus subsp. globulus]
gi|308223302|gb|ADO23610.1| ribosomal protein S18 [Eucalyptus grandis]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|296936693|gb|ADH94365.1| ribosomal protein S18 [Syzygium cumini]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|57242167|ref|ZP_00370107.1| ribosomal protein S18 [Campylobacter upsaliensis RM3195]
gi|315638121|ref|ZP_07893304.1| 30S ribosomal protein S18 [Campylobacter upsaliensis JV21]
gi|57017359|gb|EAL54140.1| ribosomal protein S18 [Campylobacter upsaliensis RM3195]
gi|315481801|gb|EFU72422.1| 30S ribosomal protein S18 [Campylobacter upsaliensis JV21]
Length = 86
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ RK C + IDYKD +L LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 7 YSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVELAIKRARHV 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|317046195|ref|YP_004072484.1| ribosomal protein S18 [Corynocarpus laevigata]
gi|309252912|gb|ADO60332.1| ribosomal protein S18 [Corynocarpus laevigata]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|122894012|ref|YP_001004208.1| ribosomal protein S18 [Ranunculus macranthus]
gi|69216271|gb|AAZ03916.1| ribosomal protein S18 [Ranunculus macranthus]
gi|85540826|gb|ABC70778.1| ribosomal protein S18 [Ranunculus macranthus]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITVAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|290487282|gb|ADD30025.1| ribosomal protein S18 [Trochodendron aralioides]
Length = 100
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|290487266|gb|ADD30017.1| ribosomal protein S18 [Ficus sp. Moore 315]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|290487262|gb|ADD30015.1| ribosomal protein S18 [Cornus florida]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|260888679|ref|ZP_05899942.1| ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
gi|260861611|gb|EEX76111.1| ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
Length = 59
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+ +
Sbjct: 7 IDYKDVAKLRRFITERGKILPRRISGNCAKHQRQVTLAIKRARNIALLPFT 57
>gi|301353401|ref|YP_003795602.1| ribosomal protein S18 [Pteridium aquilinum subsp. aquilinum]
gi|301016319|gb|ADK47606.1| ribosomal protein S18 [Pteridium aquilinum subsp. aquilinum]
Length = 75
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ LL RF+S++G+I+ R++ ++ K+QR +A AIKRAR L L+ + N
Sbjct: 21 IDYKNTSLLRRFVSEQGRILSRRMNRLTSKQQRSVATAIKRARILALLPFSN 72
>gi|166235833|gb|ABY85735.1| ribosomal protein S18 [Silene schafta]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKPKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|323358005|ref|YP_004224401.1| ribosomal protein S18 [Microbacterium testaceum StLB037]
gi|323274376|dbj|BAJ74521.1| ribosomal protein S18 [Microbacterium testaceum StLB037]
Length = 84
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+AIK AR + L+ Y
Sbjct: 30 IDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAIKNAREMALLPYAG 81
>gi|290487242|gb|ADD30005.1| ribosomal protein S18 [Ilex cornuta]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFFKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITT 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|119952915|ref|YP_945124.1| 30S ribosomal protein S18 [Borrelia turicatae 91E135]
gi|254765411|sp|A1QYR2|RS18_BORT9 RecName: Full=30S ribosomal protein S18
gi|119861686|gb|AAX17454.1| SSU ribosomal protein S18P [Borrelia turicatae 91E135]
Length = 97
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYK+ L +F++++GKI+P RI+ S K QR LA +K+ARY+ L+ +V
Sbjct: 45 DYKEFDFLKKFVTEQGKILPRRITGTSAKHQRRLALEVKKARYMALLPFV 94
>gi|290487246|gb|ADD30007.1| ribosomal protein S18 [Meliosma aff. cuneifolia Moore 333]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|229577776|ref|YP_002836112.1| ribosomal protein S18 [Megaleranthis saniculifolia]
gi|226933904|gb|ACO92037.1| ribosomal protein S18 [Megaleranthis saniculifolia]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|320333138|ref|YP_004169849.1| 30S ribosomal protein S18 [Deinococcus maricopensis DSM 21211]
gi|319754427|gb|ADV66184.1| 30S ribosomal protein S18 [Deinococcus maricopensis DSM 21211]
Length = 88
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+++L RF+S GKI+P R + +S K QR +A+ IK AR L L+ Y
Sbjct: 33 DYKDVKMLRRFISDTGKILPRRRTGLSAKNQRRIAQTIKIARQLALLPYTE 83
>gi|290487268|gb|ADD30018.1| ribosomal protein S18 [Gunnera manicata]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|124514468|gb|EAY55981.1| ribosomal protein S18 [Leptospirillum rubarum]
gi|206602643|gb|EDZ39124.1| Ribosomal protein S18 [Leptospirillum sp. Group II '5-way CG']
Length = 76
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKDI + FL++RGKI+P R+S + QR LA AIK+ R + A+
Sbjct: 23 IDYKDINTMKGFLTERGKIIPRRLSGTCSRHQRGLAAAIKQGRNVAFFAF 72
>gi|163815607|ref|ZP_02206980.1| hypothetical protein COPEUT_01782 [Coprococcus eutactus ATCC
27759]
gi|158449244|gb|EDP26239.1| hypothetical protein COPEUT_01782 [Coprococcus eutactus ATCC
27759]
Length = 87
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A P+ RRN+ R+K C IDYKD L +++S+RGKI+P RI+ K QR
Sbjct: 9 ADAPMKRRNIRRRKKVCEYCANKEAVIDYKDSNALRKYISERGKILPRRITGTCAKHQRA 68
Query: 65 LAKAIKRARYLGLIAYVN 82
+ A+KRAR + ++ YV
Sbjct: 69 ITIAVKRARQIAVLPYVQ 86
>gi|111219980|ref|YP_710774.1| 30S ribosomal protein S18-2 [Frankia alni ACN14a]
gi|123143639|sp|Q0RTD6|RS181_FRAAA RecName: Full=30S ribosomal protein S18 1
gi|111147512|emb|CAJ59165.1| 30S ribosomal protein S18-2 [Frankia alni ACN14a]
Length = 84
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K L +G +DYKD+ LL +F+S RGKI RI+ ++ ++ RE+ +AIK AR
Sbjct: 10 GQRKKPNILRERGITYVDYKDVALLRQFISDRGKIRARRITGLTPRQHREVTRAIKNARE 69
Query: 75 LGLIAY 80
+ L+ Y
Sbjct: 70 MALLPY 75
>gi|91984014|ref|YP_567098.1| ribosomal protein S18 [Vitis vinifera]
gi|224365660|ref|YP_002608387.1| ribosomal protein S18 [Vitis vinifera]
gi|122230337|sp|Q0ZIZ8|RR18_VITVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|91701672|gb|ABE47556.1| ribosomal protein S18 [Vitis vinifera]
gi|209954184|emb|CAQ77640.1| ribosomal protein S18 [Vitis vinifera]
gi|239764736|gb|ACS15207.1| ribosomal protein S18 [Vitis vinifera]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|290487248|gb|ADD30008.1| ribosomal protein S18 [Nelumbo nucifera]
Length = 101
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|13507969|ref|NP_109918.1| 30S ribosomal protein S18 [Mycoplasma pneumoniae M129]
gi|2500476|sp|P75541|RS18_MYCPN RecName: Full=30S ribosomal protein S18
gi|1674303|gb|AAB96249.1| ribosomal protein S18 [Mycoplasma pneumoniae M129]
Length = 104
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
PL +R+ +K C G RID D+ L RFLS KI P RI+ QR +A
Sbjct: 32 PLFKRS----KKYCRFCAIGQLRIDLIDDLEALKRFLSPYAKINPRRITGNCQMHQRHVA 87
Query: 67 KAIKRARYLGLIAYV 81
KA+KRARYL L+ +V
Sbjct: 88 KALKRARYLALVPFV 102
>gi|26553570|ref|NP_757504.1| ribosomal protein S18 [Mycoplasma penetrans HF-2]
gi|59798909|sp|Q8EWT5|RS18_MYCPE RecName: Full=30S ribosomal protein S18
gi|26453576|dbj|BAC43908.1| ribosomal protein S18 [Mycoplasma penetrans HF-2]
Length = 154
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C L KG +DYKD+ LL ++L+ KI +I+ K Q ++ AIKRAR +
Sbjct: 88 RKKFCKLCAKGQEHVDYKDVELLYKYLTPNLKIASRKITFACSKHQTRVSNAIKRARIVA 147
Query: 77 LIAYV 81
LI +V
Sbjct: 148 LIPFV 152
>gi|301633588|gb|ADK87142.1| ribosomal protein S18 [Mycoplasma pneumoniae FH]
Length = 103
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
PL +R+ +K C G RID D+ L RFLS KI P RI+ QR +A
Sbjct: 31 PLFKRS----KKYCRFCAIGQLRIDLIDDLEALKRFLSPYAKINPRRITGNCQMHQRHVA 86
Query: 67 KAIKRARYLGLIAYV 81
KA+KRARYL L+ +V
Sbjct: 87 KALKRARYLALVPFV 101
>gi|310779633|ref|YP_003967966.1| SSU ribosomal protein S18P [Ilyobacter polytropus DSM 2926]
gi|309748956|gb|ADO83618.1| SSU ribosomal protein S18P [Ilyobacter polytropus DSM 2926]
Length = 75
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL F++ +G+I P+R++ S K QR++AKA+KRAR + LI Y
Sbjct: 21 IDYKNADLLKNFINDKGRIKPARVNGASAKLQRKIAKAVKRARNIALIPYT 71
>gi|161784214|ref|YP_001595530.1| ribosomal protein S18 [Lemna minor]
gi|205831396|sp|A9L9B8|RR18_LEMMI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88696792|gb|ABD48517.1| ribosomal protein S18 [Lemna minor]
Length = 101
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFHKTKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|302562722|ref|ZP_07315064.1| 30S ribosomal protein S18 [Streptomyces griseoflavus Tu4000]
gi|302480340|gb|EFL43433.1| 30S ribosomal protein S18 [Streptomyces griseoflavus Tu4000]
Length = 78
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G IDYK+ LL +F+S R KI ++ V+ ++QRELA AIK AR + L+ Y
Sbjct: 17 PLDAAGITYIDYKNTDLLRKFISDRSKIRSRHVTRVTAQQQRELATAIKNAREMALLPY 75
>gi|262341104|ref|YP_003283959.1| 30S ribosomal protein S18 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272441|gb|ACY40349.1| 30S ribosomal protein S18 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 101
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+K C + IDYKD L +FL+ +GKI+P RI+ K Q +L AIKR R +G
Sbjct: 32 EKKYCYFEQRNIKYIDYKDPIFLIKFLNAQGKILPRRITGTLQKNQNKLNAAIKRCRQIG 91
Query: 77 LIAYV 81
L+ +V
Sbjct: 92 LLPFV 96
>gi|218961877|ref|YP_001741652.1| 30S ribosomal subunit protein S18 [Candidatus Cloacamonas
acidaminovorans]
gi|167730534|emb|CAO81446.1| 30S ribosomal subunit protein S18 [Candidatus Cloacamonas
acidaminovorans]
Length = 78
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYK+I +L ++S+ GKI P+R++ K QR+L IKRAR + LI Y
Sbjct: 16 CRFCANKEIQIDYKNIDVLKPYISEVGKIEPARLTGTCAKHQRKLTTEIKRARQMALIPY 75
Query: 81 V 81
V
Sbjct: 76 V 76
>gi|119368521|ref|YP_913209.1| ribosomal protein S18 [Gossypium barbadense]
gi|125987695|sp|A0ZZ57|RR18_GOSBA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|119224883|dbj|BAF41269.1| Ribosomal protein S18 [Gossypium barbadense]
Length = 101
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|218175496|gb|ACK75696.1| Rps18 [Typha domingensis]
Length = 98
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|28202194|ref|NP_777435.1| ribosomal protein S18 [Anthoceros formosae]
gi|41688681|sp|Q85BK3|RR18_ANTFO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|27807896|dbj|BAC55371.1| ribosomal protein S18 [Anthoceros formosae]
gi|27808035|dbj|BAC55467.1| ribosomal protein S18 [Anthoceros formosae]
Length = 75
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + IDYK+ LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 7 SSRRRLPPI--RSGEIIDYKNTSLLRRFISEQGKILSRRMNKLTSKQQRLVTVAIKRARI 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LALLPFLN 72
>gi|94502513|ref|YP_588139.1| ribosomal protein S18 [Helianthus annuus]
gi|183217763|ref|YP_001837382.1| ribosomal protein S18 [Guizotia abyssinica]
gi|281190743|ref|YP_003330980.1| ribosomal protein S18 [Parthenium argentatum]
gi|122244029|sp|Q1KXT7|RR18_HELAN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831392|sp|B2LML5|RR18_GUIAB RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88656917|gb|ABD47168.1| ribosomal protein S18 [Helianthus annuus]
gi|179366278|gb|ACB86549.1| ribosomal protein S18 [Guizotia abyssinica]
gi|269924856|gb|ACZ52729.1| ribosomal protein S18 [Parthenium argentatum]
Length = 101
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S R++ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRKRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|326200302|gb|ADZ52341.1| ribosomal protein S18 [Asclepias syriaca]
Length = 102
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY++I L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PPLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ + N
Sbjct: 65 AIKQARILSLLPFRN 79
>gi|302339368|ref|YP_003804574.1| ribosomal protein S18 [Spirochaeta smaragdinae DSM 11293]
gi|301636553|gb|ADK81980.1| ribosomal protein S18 [Spirochaeta smaragdinae DSM 11293]
Length = 103
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYKD L RF+++RGKI+P RI+ K QR LAK IKRAR L + +V
Sbjct: 52 DYKDPDALGRFVTERGKILPRRITGTCAKHQRLLAKEIKRARVLAYLPFV 101
>gi|237750845|ref|ZP_04581325.1| 30S ribosomal protein S18 [Helicobacter bilis ATCC 43879]
gi|229373290|gb|EEO23681.1| 30S ribosomal protein S18 [Helicobacter bilis ATCC 43879]
Length = 84
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 6 YSKRYCKYTEAKIDFIDYKDVELLKHSLSERYKIMPRRLTGNSKKWQERVEVAIKRARHM 65
Query: 76 GLIAYV 81
LI YV
Sbjct: 66 ALIPYV 71
>gi|139390174|ref|YP_001123747.1| ribosomal protein S18 [Lobularia maritima]
gi|205831399|sp|A4QLL6|RR18_LOBMA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286951|dbj|BAF50571.1| ribosomal protein S18 [Lobularia maritima]
Length = 101
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR +
Sbjct: 7 PFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++
Sbjct: 65 AIKQARILSLLPFLT 79
>gi|149199262|ref|ZP_01876300.1| 30S ribosomal protein S18 [Lentisphaera araneosa HTCC2155]
gi|149137687|gb|EDM26102.1| 30S ribosomal protein S18 [Lentisphaera araneosa HTCC2155]
Length = 78
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ + R K C S + ID+ D +L +F+++ G+I+P RI+ VS + Q LA AIK
Sbjct: 10 RKKAAVRAKVCRFSEQKVTYIDFTDADVLKKFMTEGGRILPRRITGVSKRYQAMLASAIK 69
Query: 71 RARYLGLI 78
RAR + L+
Sbjct: 70 RARNIALV 77
>gi|289065111|ref|YP_003433997.1| ribosomal protein S18 [Typha latifolia]
gi|69216273|gb|AAZ03917.1| ribosomal protein S18 [Typha latifolia]
gi|281371794|gb|ADA63721.1| ribosomal protein S18 [Typha latifolia]
Length = 101
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|227496647|ref|ZP_03926923.1| ribosomal protein S18 [Actinomyces urogenitalis DSM 15434]
gi|226833842|gb|EEH66225.1| ribosomal protein S18 [Actinomyces urogenitalis DSM 15434]
Length = 78
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P LR+ ++K P+ IDYKD L +F+S RGKI R++ VS ++QR++AK
Sbjct: 4 PQLRK---PKKKIGPVKAIKVGTIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRKIAK 60
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 61 AVKNAREMALLPY 73
>gi|187251761|ref|YP_001876243.1| 30S ribosomal protein S18 [Elusimicrobium minutum Pei191]
gi|226735118|sp|B2KEG0|RS18_ELUMP RecName: Full=30S ribosomal protein S18
gi|186971921|gb|ACC98906.1| Ribosomal protein S18 [Elusimicrobium minutum Pei191]
Length = 113
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A P ++ RRK C L + +DYK+ + + F GKI+ RI+ K QR+
Sbjct: 33 AKGPFGKKRFESRRKVCKLCAEKIENVDYKNFQFIKSFTMDSGKILSRRITGTCAKHQRQ 92
Query: 65 LAKAIKRARYLGLIAY 80
+A A+KR R L ++ Y
Sbjct: 93 IASAVKRDRNLAILPY 108
>gi|167629778|ref|YP_001680277.1| 30S ribosomal protein s18 [Heliobacterium modesticaldum Ice1]
gi|205558496|sp|B0TE71|RS18_HELMI RecName: Full=30S ribosomal protein S18
gi|167592518|gb|ABZ84266.1| 30S ribosomal protein s18 [Heliobacterium modesticaldum Ice1]
Length = 86
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK++ L +++++RGKI+P R+S K QR+L AIKRAR++ L+ +
Sbjct: 33 VDYKEVGKLRKYITERGKILPRRVSGCCAKHQRQLTNAIKRARHVALLPFT 83
>gi|312141932|ref|YP_004009268.1| 30S ribosomal protein s18 rpsr [Rhodococcus equi 103S]
gi|325672814|ref|ZP_08152508.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
gi|311891271|emb|CBH50592.1| 30S ribosomal protein S18 RpsR [Rhodococcus equi 103S]
gi|325556067|gb|EGD25735.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
Length = 80
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +IDYKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKV-MKKKVCTFCKEKNTQIDYKDTALLRKYVSDRGKIRARRVTGNCVQHQRDI 60
Query: 66 AKAIKRARYLGLIAYVN 82
A A+K +R + L+ YV+
Sbjct: 61 AVAVKNSREVALLPYVS 77
>gi|218291071|ref|ZP_03495094.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius LAA1]
gi|218238956|gb|EED06163.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius LAA1]
Length = 136
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+ L++FL++RGKI+P RI+ + QR++ AIKRAR + L+ Y +
Sbjct: 25 DYKDVARLSKFLTERGKILPRRITGNCARHQRQVTVAIKRARQVALLPYTH 75
>gi|313891893|ref|ZP_07825495.1| ribosomal protein S18 [Dialister microaerophilus UPII 345-E]
gi|313119668|gb|EFR42858.1| ribosomal protein S18 [Dialister microaerophilus UPII 345-E]
Length = 77
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSH--RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++RR+ S R+K + G +DYKD+ L F+S+RGKI+P R++ K QR +
Sbjct: 1 MIRRDKSRKPRKKISQIFGDKLDNLDYKDVATLRHFISERGKILPRRVTGACAKHQRNIN 60
Query: 67 KAIKRARYLGLIAY 80
A+KRAR + L+ +
Sbjct: 61 LAVKRARAIALLPF 74
>gi|261749385|ref|YP_003257070.1| 30S ribosomal protein S18 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497477|gb|ACX83927.1| ribosomal protein S18 [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 106
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+K C + IDYKD L +FL+ +GKI+P RI+ K Q +L AIKR R +G
Sbjct: 37 EKKYCYFKQRNIKYIDYKDPIFLIKFLNAQGKILPRRITGTLQKNQNKLNAAIKRCRQIG 96
Query: 77 LIAYV 81
L+ +V
Sbjct: 97 LLPFV 101
>gi|262037248|ref|ZP_06010730.1| ribosomal protein S18 [Leptotrichia goodfellowii F0264]
gi|261748720|gb|EEY36077.1| ribosomal protein S18 [Leptotrichia goodfellowii F0264]
Length = 77
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKR+R + L+ Y
Sbjct: 23 INYKNVDLLKNFMNDKGKISPARVTGLEAKIQRKIAKAIKRSRQIALMPYT 73
>gi|157736504|ref|YP_001489187.1| 30S ribosomal protein S18 [Arcobacter butzleri RM4018]
gi|315635663|ref|ZP_07890926.1| 30S ribosomal protein S18 [Arcobacter butzleri JV22]
gi|167011186|sp|A8ERE4|RS18_ARCB4 RecName: Full=30S ribosomal protein S18
gi|157698358|gb|ABV66518.1| 30S ribosomal protein S18 [Arcobacter butzleri RM4018]
gi|315479960|gb|EFU70630.1| 30S ribosomal protein S18 [Arcobacter butzleri JV22]
Length = 88
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYK+ LL +S+RGKI+P R++ S Q + KAIKRAR++ L
Sbjct: 9 KKYCKYTEMKVDFIDYKNTELLKLSMSERGKIMPRRLTGNSKNAQEMVEKAIKRARHMAL 68
Query: 78 IAYV 81
+ Y+
Sbjct: 69 VPYI 72
>gi|139388932|ref|YP_001123659.1| ribosomal protein S18 [Lepidium virginicum]
gi|205831398|sp|A4QLC8|RR18_LEPVR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286862|dbj|BAF50483.1| ribosomal protein S18 [Lepidium virginicum]
Length = 101
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + AI +AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIAINQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|15805141|ref|NP_293827.1| 30S ribosomal protein S18 [Deinococcus radiodurans R1]
gi|11387111|sp|Q9RY50|RS18_DEIRA RecName: Full=30S ribosomal protein S18
gi|6457767|gb|AAF09693.1|AE001873_3 ribosomal protein S18 [Deinococcus radiodurans R1]
Length = 92
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+++L RF+S GKI+P R + +S K QR +A+ IK AR L L+ Y
Sbjct: 37 DYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRIAQTIKVARQLALLPYTE 87
>gi|269792266|ref|YP_003317170.1| 30S ribosomal protein S18 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099901|gb|ACZ18888.1| ribosomal protein S18 [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 81
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYK+ L +++++RGKI+P R++ K QR+L +AIKRAR L L+ +
Sbjct: 19 CHFCVDKVEAVDYKEFDKLRKYVTERGKIIPRRVTGTCAKHQRQLTRAIKRARILALLPF 78
Query: 81 V 81
Sbjct: 79 T 79
>gi|221110694|ref|XP_002155234.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 146
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 11 RRNVSHRRKSCPLSGKGAPRI--DYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAK 67
R +V R C L P I DYK++RLL++F+S GKI SRI+ + KQRELA+
Sbjct: 60 RLDVEDRPTGCLLCPHRNPEIELDYKNVRLLSQFVSPHTGKIYGSRITGLCPNKQRELAQ 119
Query: 68 AIKRARYLGLI 78
I+RAR +GL+
Sbjct: 120 NIRRARKVGLM 130
>gi|226354820|ref|YP_002784560.1| 30S ribosomal protein S18 [Deinococcus deserti VCD115]
gi|259494805|sp|C1CXK0|RS18_DEIDV RecName: Full=30S ribosomal protein S18
gi|226316810|gb|ACO44806.1| putative 30S ribosomal protein S18 [Deinococcus deserti VCD115]
Length = 92
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+++L RF+S GKI+P R + +S K QR +A+ IK AR L L+ Y
Sbjct: 37 DYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRIAQTIKVARQLALLPYTE 87
>gi|148274145|ref|YP_001223706.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166220943|sp|A5CVA9|RS18_CLAM3 RecName: Full=30S ribosomal protein S18
gi|147832075|emb|CAN03048.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 87
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K AR + L+ Y
Sbjct: 33 IDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAVKNAREMALLPYAG 84
>gi|170783385|ref|YP_001711719.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
sepedonicus]
gi|189029671|sp|B0RDN6|RS18_CLAMS RecName: Full=30S ribosomal protein S18
gi|169157955|emb|CAQ03165.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 87
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K AR + L+ Y
Sbjct: 33 IDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAVKNAREMALLPYAG 84
>gi|166235547|gb|ABY85462.1| ribosomal protein S18 [Lychnis chalcedonica]
Length = 82
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|239616720|ref|YP_002940042.1| ribosomal protein S18 [Kosmotoga olearia TBF 19.5.1]
gi|239505551|gb|ACR79038.1| ribosomal protein S18 [Kosmotoga olearia TBF 19.5.1]
Length = 75
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK+ LL F++++GKIVP RI+ K QR + AIKRAR++ L+ +
Sbjct: 23 VDYKNTALLKEFMTEKGKIVPKRITGNCAKHQRMVKTAIKRARHMALLPFT 73
>gi|258591291|emb|CBE67588.1| 30S ribosomal subunit protein S18 [NC10 bacterium 'Dutch
sediment']
Length = 78
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R R+K C +D+KD + L F++ RGKI+P RIS QR+L A
Sbjct: 2 LKKRRSFRRQKVCKWCVDKVETVDFKDAKRLRNFITDRGKIIPRRISGNCAGHQRQLGGA 61
Query: 69 IKRARYLGLIAY 80
IKRAR + L+ +
Sbjct: 62 IKRARSIALLPF 73
>gi|320531754|ref|ZP_08032683.1| ribosomal protein S18 [Actinomyces sp. oral taxon 171 str. F0337]
gi|325066293|ref|ZP_08124966.1| 30S ribosomal protein S18 [Actinomyces oris K20]
gi|326772815|ref|ZP_08232099.1| ribosomal protein S18 [Actinomyces viscosus C505]
gi|329944676|ref|ZP_08292786.1| ribosomal protein S18 [Actinomyces sp. oral taxon 170 str. F0386]
gi|320136017|gb|EFW28036.1| ribosomal protein S18 [Actinomyces sp. oral taxon 171 str. F0337]
gi|326637447|gb|EGE38349.1| ribosomal protein S18 [Actinomyces viscosus C505]
gi|328530090|gb|EGF56976.1| ribosomal protein S18 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 78
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKD L +F+S RGKI R++ VS ++QR++AKA+K AR + L+ Y
Sbjct: 24 IDYKDTATLRKFISDRGKIRARRVTGVSVQEQRKIAKAVKNAREMALLPY 73
>gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 [Propionibacterium acnes KPA171202]
gi|282854508|ref|ZP_06263844.1| ribosomal protein S18 [Propionibacterium acnes J139]
gi|289425919|ref|ZP_06427671.1| ribosomal protein S18 [Propionibacterium acnes SK187]
gi|289428173|ref|ZP_06429872.1| ribosomal protein S18 [Propionibacterium acnes J165]
gi|295131751|ref|YP_003582414.1| ribosomal protein S18 [Propionibacterium acnes SK137]
gi|59798675|sp|Q6A5N1|RS18_PROAC RecName: Full=30S ribosomal protein S18
gi|50841265|gb|AAT83932.1| 30S ribosomal protein S18-1 [Propionibacterium acnes KPA171202]
gi|282582369|gb|EFB87750.1| ribosomal protein S18 [Propionibacterium acnes J139]
gi|289153695|gb|EFD02404.1| ribosomal protein S18 [Propionibacterium acnes SK187]
gi|289158653|gb|EFD06857.1| ribosomal protein S18 [Propionibacterium acnes J165]
gi|291375799|gb|ADD99653.1| ribosomal protein S18 [Propionibacterium acnes SK137]
gi|313765165|gb|EFS36529.1| ribosomal protein S18 [Propionibacterium acnes HL013PA1]
gi|313771567|gb|EFS37533.1| ribosomal protein S18 [Propionibacterium acnes HL074PA1]
gi|313794143|gb|EFS42163.1| ribosomal protein S18 [Propionibacterium acnes HL110PA1]
gi|313808599|gb|EFS47059.1| ribosomal protein S18 [Propionibacterium acnes HL087PA2]
gi|313811965|gb|EFS49679.1| ribosomal protein S18 [Propionibacterium acnes HL083PA1]
gi|313813951|gb|EFS51665.1| ribosomal protein S18 [Propionibacterium acnes HL025PA1]
gi|313817111|gb|EFS54825.1| ribosomal protein S18 [Propionibacterium acnes HL059PA1]
gi|313819056|gb|EFS56770.1| ribosomal protein S18 [Propionibacterium acnes HL046PA2]
gi|313821665|gb|EFS59379.1| ribosomal protein S18 [Propionibacterium acnes HL036PA1]
gi|313823801|gb|EFS61515.1| ribosomal protein S18 [Propionibacterium acnes HL036PA2]
gi|313826905|gb|EFS64619.1| ribosomal protein S18 [Propionibacterium acnes HL063PA1]
gi|313829276|gb|EFS66990.1| ribosomal protein S18 [Propionibacterium acnes HL063PA2]
gi|313832398|gb|EFS70112.1| ribosomal protein S18 [Propionibacterium acnes HL007PA1]
gi|313834169|gb|EFS71883.1| ribosomal protein S18 [Propionibacterium acnes HL056PA1]
gi|313839203|gb|EFS76917.1| ribosomal protein S18 [Propionibacterium acnes HL086PA1]
gi|314916830|gb|EFS80661.1| ribosomal protein S18 [Propionibacterium acnes HL005PA4]
gi|314919007|gb|EFS82838.1| ribosomal protein S18 [Propionibacterium acnes HL050PA1]
gi|314921162|gb|EFS84993.1| ribosomal protein S18 [Propionibacterium acnes HL050PA3]
gi|314921990|gb|EFS85821.1| ribosomal protein S18 [Propionibacterium acnes HL001PA1]
gi|314926141|gb|EFS89972.1| ribosomal protein S18 [Propionibacterium acnes HL036PA3]
gi|314932491|gb|EFS96322.1| ribosomal protein S18 [Propionibacterium acnes HL067PA1]
gi|314956280|gb|EFT00652.1| ribosomal protein S18 [Propionibacterium acnes HL027PA1]
gi|314958674|gb|EFT02776.1| ribosomal protein S18 [Propionibacterium acnes HL002PA1]
gi|314960980|gb|EFT05081.1| ribosomal protein S18 [Propionibacterium acnes HL002PA2]
gi|314965947|gb|EFT10046.1| ribosomal protein S18 [Propionibacterium acnes HL082PA2]
gi|314968804|gb|EFT12902.1| ribosomal protein S18 [Propionibacterium acnes HL037PA1]
gi|314975064|gb|EFT19159.1| ribosomal protein S18 [Propionibacterium acnes HL053PA1]
gi|314977475|gb|EFT21570.1| ribosomal protein S18 [Propionibacterium acnes HL045PA1]
gi|314979063|gb|EFT23157.1| ribosomal protein S18 [Propionibacterium acnes HL072PA2]
gi|314980730|gb|EFT24824.1| ribosomal protein S18 [Propionibacterium acnes HL110PA3]
gi|314985853|gb|EFT29945.1| ribosomal protein S18 [Propionibacterium acnes HL005PA1]
gi|314985957|gb|EFT30049.1| ribosomal protein S18 [Propionibacterium acnes HL005PA2]
gi|314989266|gb|EFT33357.1| ribosomal protein S18 [Propionibacterium acnes HL005PA3]
gi|315078286|gb|EFT50325.1| ribosomal protein S18 [Propionibacterium acnes HL053PA2]
gi|315081408|gb|EFT53384.1| ribosomal protein S18 [Propionibacterium acnes HL078PA1]
gi|315084952|gb|EFT56928.1| ribosomal protein S18 [Propionibacterium acnes HL027PA2]
gi|315087482|gb|EFT59458.1| ribosomal protein S18 [Propionibacterium acnes HL002PA3]
gi|315089610|gb|EFT61586.1| ribosomal protein S18 [Propionibacterium acnes HL072PA1]
gi|315090951|gb|EFT62927.1| ribosomal protein S18 [Propionibacterium acnes HL110PA4]
gi|315095174|gb|EFT67150.1| ribosomal protein S18 [Propionibacterium acnes HL060PA1]
gi|315096895|gb|EFT68871.1| ribosomal protein S18 [Propionibacterium acnes HL038PA1]
gi|315100045|gb|EFT72021.1| ribosomal protein S18 [Propionibacterium acnes HL059PA2]
gi|315102795|gb|EFT74771.1| ribosomal protein S18 [Propionibacterium acnes HL046PA1]
gi|315105293|gb|EFT77269.1| ribosomal protein S18 [Propionibacterium acnes HL050PA2]
gi|315107349|gb|EFT79325.1| ribosomal protein S18 [Propionibacterium acnes HL030PA1]
gi|315110503|gb|EFT82479.1| ribosomal protein S18 [Propionibacterium acnes HL030PA2]
gi|327328803|gb|EGE70563.1| ribosomal protein S18 [Propionibacterium acnes HL103PA1]
gi|327332994|gb|EGE74726.1| ribosomal protein S18 [Propionibacterium acnes HL096PA2]
gi|327333986|gb|EGE75701.1| ribosomal protein S18 [Propionibacterium acnes HL096PA3]
gi|327334405|gb|EGE76116.1| ribosomal protein S18 [Propionibacterium acnes HL097PA1]
gi|327448702|gb|EGE95356.1| ribosomal protein S18 [Propionibacterium acnes HL043PA1]
gi|327449106|gb|EGE95760.1| ribosomal protein S18 [Propionibacterium acnes HL043PA2]
gi|327450359|gb|EGE97013.1| ribosomal protein S18 [Propionibacterium acnes HL013PA2]
gi|327455518|gb|EGF02173.1| ribosomal protein S18 [Propionibacterium acnes HL087PA3]
gi|327456173|gb|EGF02828.1| ribosomal protein S18 [Propionibacterium acnes HL083PA2]
gi|327457576|gb|EGF04231.1| ribosomal protein S18 [Propionibacterium acnes HL092PA1]
gi|328756818|gb|EGF70434.1| ribosomal protein S18 [Propionibacterium acnes HL087PA1]
gi|328757706|gb|EGF71322.1| ribosomal protein S18 [Propionibacterium acnes HL020PA1]
gi|328759101|gb|EGF72717.1| ribosomal protein S18 [Propionibacterium acnes HL025PA2]
gi|328762210|gb|EGF75706.1| ribosomal protein S18 [Propionibacterium acnes HL099PA1]
gi|332676615|gb|AEE73431.1| 30S ribosomal protein S18 [Propionibacterium acnes 266]
Length = 79
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGKI R++ +S + QR++A AIK
Sbjct: 5 QRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|189162293|ref|YP_001936539.1| ribosomal protein S18 [Fagopyrum esculentum subsp. ancestrale]
gi|166065379|gb|ABY79754.1| ribosomal protein S18 [Fagopyrum esculentum subsp. ancestrale]
Length = 101
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ PL + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 15 FRRRLPPL--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARIL 72
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 73 SLLPFLN 79
>gi|157325552|ref|YP_001468330.1| ribosomal protein S18 [Ipomoea purpurea]
gi|205831395|sp|A7Y3G8|RR18_IPOPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|157056780|gb|ABV02370.1| ribosomal protein S18 [Ipomoea purpurea]
Length = 115
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITL 64
Query: 68 AIKRARYLGLIAY 80
AIK+AR L L+ +
Sbjct: 65 AIKQARILSLLPF 77
>gi|51209975|ref|YP_063639.1| 30S ribosomal protein S18 [Gracilaria tenuistipitata var. liui]
gi|62287420|sp|Q6B8S1|RR18_GRATL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50657729|gb|AAT79714.1| 30S ribosomal protein S18 [Gracilaria tenuistipitata var. liui]
Length = 70
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
I+YKDI LL +F++ + KIV R + ++ K+Q++LAK+IK+AR L L+ +VN
Sbjct: 17 INYKDIDLLRKFITDQSKIVSRRSNGLTVKQQKQLAKSIKKARILALLPFVN 68
>gi|317123154|ref|YP_004103157.1| 30S ribosomal protein S18P [Thermaerobacter marianensis DSM
12885]
gi|315593134|gb|ADU52430.1| SSU ribosomal protein S18P [Thermaerobacter marianensis DSM
12885]
Length = 75
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD L +FL++RGKI+P RI+ + QR+L +AIKRAR + L+ +
Sbjct: 23 VDYKDAGRLRKFLTERGKILPRRITGNCARHQRQLTRAIKRARIMALLPFT 73
>gi|284993409|ref|YP_003411964.1| 30S ribosomal protein S18 [Geodermatophilus obscurus DSM 43160]
gi|284066655|gb|ADB77593.1| ribosomal protein S18 [Geodermatophilus obscurus DSM 43160]
Length = 78
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C A IDYKD LL +F+S RGKI R+S + QR++A A+K +R + L+ Y
Sbjct: 14 CQFCKDKATYIDYKDTTLLRKFISDRGKIRARRVSGNCSQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|189095362|ref|YP_001936375.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
gi|157694705|gb|ABV65981.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
gi|157777936|gb|ABV70122.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
Length = 70
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKDI LL F++++GKI+P R + ++ K+Q +LA+A+KRAR L+ Y+
Sbjct: 15 IRYKDIELLRSFITEQGKILPRRTTHLTVKQQNQLARAVKRARMAKLLPYI 65
>gi|269114888|ref|YP_003302651.1| 30S ribosomal protein S18 [Mycoplasma hominis]
gi|268322513|emb|CAX37248.1| 30S ribosomal protein S18 [Mycoplasma hominis ATCC 23114]
Length = 99
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 9 LLRRNVSHRRKSCP--LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++R+ R++ C LS + IDYK+ +L++ ++ +GKI+ SRI+ K QR +A
Sbjct: 4 IVRKKPFIRKRPCQFCLSKEPVVYIDYKNEEVLSKLVNLQGKILSSRITGTCAKHQRAVA 63
Query: 67 KAIKRARYLGLIAYVNL 83
AIKRAR++G++ Y+ L
Sbjct: 64 LAIKRARFVGILPYIGL 80
>gi|166235679|gb|ABY85588.1| ribosomal protein S18 [Silene integripetala]
Length = 101
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|166235855|gb|ABY85756.1| ribosomal protein S18 [Silene aegyptiaca]
Length = 101
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|222084167|ref|YP_002519761.1| ribosomal protein S18 [Gnetum parvifolium]
gi|205831391|sp|A6BM60|RR18_GNEPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|149941476|dbj|BAF64905.1| ribosomal protein S18 [Gnetum parvifolium]
gi|220983504|dbj|BAH11272.1| ribosomal protein S18 [Gnetum parvifolium]
Length = 98
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P+ K +I+YK++ L+N F+SQR KI+ +++ ++ K+QR ++ AIKRAR L L+ ++
Sbjct: 30 PIRIKSEDQINYKNVSLINGFISQRAKILSRKVTKLTWKQQRLMSVAIKRARILSLLPFI 89
>gi|119358278|ref|YP_912922.1| 30S ribosomal protein S18 [Chlorobium phaeobacteroides DSM 266]
gi|205557903|sp|A1BJC1|RS18_CHLPD RecName: Full=30S ribosomal protein S18
gi|119355627|gb|ABL66498.1| SSU ribosomal protein S18P [Chlorobium phaeobacteroides DSM 266]
Length = 87
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 32 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLAVIPYV 82
>gi|325989379|ref|YP_004249078.1| 30S ribosomal protein S18 [Mycoplasma suis KI3806]
gi|323574464|emb|CBZ40114.1| 30S ribosomal protein S18 [Mycoplasma suis]
Length = 124
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C L +G IDYKD L +L + K++ +IS K Q +L++AIKRARY+ L
Sbjct: 59 KKVCWLCRRGVLTIDYKDTEFLKNYLKRYNKVLIHKISGNCLKHQHQLSQAIKRARYIAL 118
Query: 78 IAYV 81
+ +V
Sbjct: 119 LPFV 122
>gi|194132125|gb|ACF33379.1| ribosomal protein S18 [Gonystylus bancanus]
Length = 101
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SLRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|193211786|ref|YP_001997739.1| 30S ribosomal protein S18 [Chlorobaculum parvum NCIB 8327]
gi|193085263|gb|ACF10539.1| ribosomal protein S18 [Chlorobaculum parvum NCIB 8327]
Length = 87
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L +IK AR+L +I YV
Sbjct: 32 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQSLLTHSIKWARFLAIIPYV 82
>gi|114804285|ref|YP_762283.1| ribosomal protein S18 [Morus indica]
gi|122166783|sp|Q09WZ5|RR18_MORIN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|78100337|gb|ABB20978.1| ribosomal protein S18 [Morus indica]
Length = 101
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LCLLPFLN 79
>gi|164597828|ref|NP_084714.2| ribosomal protein S18 [Oenothera elata subsp. hookeri]
gi|169142967|ref|YP_001687389.1| ribosomal protein S18 [Oenothera biennis]
gi|172045754|sp|Q9MTK1|RR18_OENEH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831404|sp|B0Z4Y2|RR18_OENBI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159793140|gb|ABW98894.1| ribosomal protein S18 [Oenothera biennis]
gi|162423695|emb|CAB67179.2| ribosomal protein S18 [Oenothera elata subsp. hookeri]
Length = 101
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAY 80
L L+ +
Sbjct: 72 LSLLPF 77
>gi|290487272|gb|ADD30020.1| ribosomal protein S18 [Liquidambar styraciflua]
Length = 101
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|317152940|ref|YP_004120988.1| 30S ribosomal protein S18 [Desulfovibrio aespoeensis Aspo-2]
gi|316943191|gb|ADU62242.1| ribosomal protein S18 [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + R+K C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FRKKFTPRKKFCRFCADQELPLDYKRTDILRDFVTERGKIIARRITGTCAKHQRRLTNEI 62
Query: 70 KRARYLGLIAYVNL 83
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTTV 76
>gi|21674942|ref|NP_663007.1| 30S ribosomal protein S18 [Chlorobium tepidum TLS]
gi|25009175|sp|Q8KAM3|RS18_CHLTE RecName: Full=30S ribosomal protein S18
gi|21648172|gb|AAM73349.1| ribosomal protein S18 [Chlorobium tepidum TLS]
Length = 74
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L +IK AR+L +I YV
Sbjct: 19 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQSLLTHSIKWARFLAIIPYV 69
>gi|331700355|ref|YP_004336594.1| 30S ribosomal protein S18 [Pseudonocardia dioxanivorans CB1190]
gi|326955044|gb|AEA28741.1| 30S ribosomal protein S18 [Pseudonocardia dioxanivorans CB1190]
Length = 78
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+LR+ ++K C A IDYKD LL +F+S RGKI R++ + QR++A
Sbjct: 4 PVLRK---PKKKVCAFCKDKAQEIDYKDTGLLRKFISDRGKIRARRVTGNCRQHQRDVAV 60
Query: 68 AIKRARYLGLIAYVN 82
A+K +R + L+ Y +
Sbjct: 61 AVKNSREVALLPYTS 75
>gi|323148926|ref|YP_004222481.1| ribosomal protein S18 [Smilax china]
gi|308742617|gb|ADO33468.1| ribosomal protein S18 [Smilax china]
Length = 101
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + +S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFRKSKLSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|169142882|ref|YP_001687305.1| ribosomal protein S18 [Oenothera glazioviana]
gi|205831405|sp|B0Z566|RR18_OENGL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159895494|gb|ABX10059.1| ribosomal protein S18 [Oenothera glazioviana]
Length = 97
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAY 80
IK+AR L L+ +
Sbjct: 66 IKQARILSLLPF 77
>gi|72163492|ref|YP_291149.1| 30S ribosomal protein S18 [Thermobifida fusca YX]
gi|123733431|sp|Q47K96|RS18_THEFY RecName: Full=30S ribosomal protein S18
gi|71917224|gb|AAZ57126.1| SSU ribosomal protein S18P [Thermobifida fusca YX]
Length = 78
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +DYKD LL +F+S RGKI R++ + QR++AKA+K AR + L+ Y
Sbjct: 14 CVFCQEKMTYVDYKDTTLLRKFISDRGKIRARRVTGNCTQHQRDVAKAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|313184015|ref|YP_004021172.1| ribosomal protein S18 [Castanea mollissima]
gi|309321542|gb|ADO65082.1| ribosomal protein S18 [Castanea mollissima]
Length = 119
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSG-DRIDYRNMSLISRFISEQGKILSRRVNRLNLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|290487258|gb|ADD30013.1| ribosomal protein S18 [Berberidopsis corallina]
Length = 101
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFFKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|225181169|ref|ZP_03734615.1| ribosomal protein S18 [Dethiobacter alkaliphilus AHT 1]
gi|225168138|gb|EEG76943.1| ribosomal protein S18 [Dethiobacter alkaliphilus AHT 1]
Length = 76
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYK L RF+++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 12 KVCNFCVDKVQNIDYKLTGKLARFVTERGKILPRRISGNCAKHQRQLTIAIKRARNIALL 71
Query: 79 AY 80
Y
Sbjct: 72 PY 73
>gi|94502360|ref|ZP_01308826.1| ribosomal protein S18 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833772|ref|YP_001597968.1| 30S ribosomal subunit protein S18 [Candidatus Sulcia muelleri GWSS]
gi|205617784|sp|A8Z621|RS18_SULMW RecName: Full=30S ribosomal protein S18
gi|94451085|gb|EAT14044.1| ribosomal protein S18 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206262|gb|ABS30572.1| 30S ribosomal subunit protein S18 [Candidatus Sulcia muelleri GWSS]
Length = 180
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
K C ID+K+ L +FL++RG+I+P RI+ S K Q++L +AIK+ +++G
Sbjct: 111 ENKYCFFKKNNIKYIDFKNPSFLMKFLNERGEILPRRITGTSKKFQKKLKRAIKKCKHIG 170
Query: 77 LIAYV 81
L+ Y+
Sbjct: 171 LLPYL 175
>gi|293977885|ref|YP_003543315.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri DMIN]
gi|292667816|gb|ADE35451.1| ribosomal protein S18 [Candidatus Sulcia muelleri DMIN]
Length = 156
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
K C ID+K+ L +FL++RG+I+P RI+ S K Q +L +AIK+ +++G
Sbjct: 87 ENKYCFFKKNNIKYIDFKNPSFLMKFLNERGEILPRRITGTSKKFQNKLKRAIKKCKHIG 146
Query: 77 LIAYV 81
L+ Y+
Sbjct: 147 LLPYL 151
>gi|257042731|gb|ACV32998.1| ribosomal protein S18 [Pinus monticola]
Length = 93
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ ++RF+S++GKI+ R++ ++ K+QR + AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSXISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|258512886|ref|YP_003186320.1| 30S ribosomal protein S18 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479612|gb|ACV59931.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 76
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+ L++FL++RGKI+P RI+ + QR++ AIKRAR + L+ Y
Sbjct: 25 DYKDVARLSKFLTERGKILPRRITGNCARHQRQVTVAIKRARQVALLPYTT 75
>gi|194333006|ref|YP_002014866.1| 30S ribosomal protein S18 [Prosthecochloris aestuarii DSM 271]
gi|194310824|gb|ACF45219.1| ribosomal protein S18 [Prosthecochloris aestuarii DSM 271]
Length = 78
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 23 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLAIIPYV 73
>gi|78188079|ref|YP_378417.1| 30S ribosomal protein S18 [Chlorobium chlorochromatii CaD3]
gi|123743406|sp|Q3ANR3|RS18_CHLCH RecName: Full=30S ribosomal protein S18
gi|78170278|gb|ABB27374.1| SSU ribosomal protein S18P [Chlorobium chlorochromatii CaD3]
Length = 92
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 37 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLAVIPYV 87
>gi|189499150|ref|YP_001958620.1| 30S ribosomal protein S18 [Chlorobium phaeobacteroides BS1]
gi|189494591|gb|ACE03139.1| ribosomal protein S18 [Chlorobium phaeobacteroides BS1]
Length = 87
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 32 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLSIIPYV 82
>gi|12044944|ref|NP_072754.1| 30S ribosomal protein S18 [Mycoplasma genitalium G37]
gi|1350949|sp|P47338|RS18_MYCGE RecName: Full=30S ribosomal protein S18
gi|3844679|gb|AAC71310.1| ribosomal protein S18 [Mycoplasma genitalium G37]
gi|166078670|gb|ABY79288.1| ribosomal protein S18 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 105
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
N +K C G RID+ D+ + RFLS KI P RI+ + QR +A A+KR
Sbjct: 34 NFKRAKKYCRFCAIGQLRIDFIDDLEAIKRFLSPYAKINPRRITGNCNMHQRHVANALKR 93
Query: 72 ARYLGLIAYV 81
ARYL L+ ++
Sbjct: 94 ARYLALVPFI 103
>gi|313803266|gb|EFS44462.1| ribosomal protein S18 [Propionibacterium acnes HL110PA2]
gi|314964040|gb|EFT08140.1| ribosomal protein S18 [Propionibacterium acnes HL082PA1]
Length = 79
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGK+ R++ +S + QR++A AIK
Sbjct: 5 QRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKVRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|149390290|ref|YP_001294120.1| ribosomal protein S18 [Chloranthus spicatus]
gi|205831381|sp|A6MME4|RR18_CHLSC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|146744210|gb|ABQ43282.1| ribosomal protein S18 [Chloranthus spicatus]
Length = 101
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RK P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 16 RKRLPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITTAIKQARILSS 74
Query: 78 IAYVN 82
+ ++N
Sbjct: 75 LPFLN 79
>gi|50955940|ref|YP_063228.1| 30S ribosomal protein S18 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|59798680|sp|Q6ABW9|RS18_LEIXX RecName: Full=30S ribosomal protein S18
gi|50952422|gb|AAT90123.1| 30S ribosomal protein S18 [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 87
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K AR + L+ Y
Sbjct: 33 IDYKDVATLRKFISERGKIRALRITGVSVQEQRLIARAVKNAREMALLPYAG 84
>gi|161899036|ref|YP_077144.2| 30S ribosomal protein S18 [Symbiobacterium thermophilum IAM
14863]
gi|205620330|sp|Q67J50|RS18_SYMTH RecName: Full=30S ribosomal protein S18
Length = 76
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD L R++++RGKI+P RIS + QR+L AIKRAR + L+ +
Sbjct: 14 CSFCVDKIEHVDYKDAARLKRYITERGKILPRRISGNCARHQRQLTVAIKRARIMALLPF 73
>gi|169142732|ref|YP_001687159.1| ribosomal protein S18 [Oenothera argillicola]
gi|169143053|ref|YP_001687473.1| ribosomal protein S18 [Oenothera parviflora]
gi|205831403|sp|B0Z4P8|RR18_OENAR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831406|sp|B0Z5F0|RR18_OENPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159792970|gb|ABW98726.1| ribosomal protein S18 [Oenothera argillicola]
gi|159895579|gb|ABX10143.1| ribosomal protein S18 [Oenothera parviflora]
Length = 107
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAY 80
L L+ +
Sbjct: 72 LSLLPF 77
>gi|255660112|ref|ZP_05405521.1| 30S ribosomal protein S18 [Mycoplasma genitalium G37]
Length = 104
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
N +K C G RID+ D+ + RFLS KI P RI+ + QR +A A+KR
Sbjct: 33 NFKRAKKYCRFCAIGQLRIDFIDDLEAIKRFLSPYAKINPRRITGNCNMHQRHVANALKR 92
Query: 72 ARYLGLIAYV 81
ARYL L+ ++
Sbjct: 93 ARYLALVPFI 102
>gi|51858142|dbj|BAD42300.1| 30S ribosomal protein S18 [Symbiobacterium thermophilum IAM
14863]
Length = 64
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD L R++++RGKI+P RIS + QR+L AIKRAR + L+ +
Sbjct: 2 CSFCVDKIEHVDYKDAARLKRYITERGKILPRRISGNCARHQRQLTVAIKRARIMALLPF 61
Query: 81 V 81
Sbjct: 62 T 62
>gi|297170210|gb|ADI21248.1| hypothetical protein [uncultured myxobacterium HF0010_08B07]
Length = 68
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDY+D L F+S+ GKI+ SR + ++ K+QR+L KAIK+AR LGL+ + +
Sbjct: 9 IDYRDPDTLKGFISENGKILSSRYTRLNAKEQRKLTKAIKKARLLGLLPFTD 60
>gi|68164825|ref|YP_247621.1| ribosomal protein S18 [Cucumis sativus]
gi|75317284|sp|Q4VZJ5|RR18_CUCSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|67511420|emb|CAJ00780.1| ribosomal protein S18 [Cucumis sativus]
gi|74027123|gb|AAZ94673.1| ribosomal protein S18 [Cucumis sativus]
gi|115432826|gb|ABI97439.1| ribosomal protein S18 [Cucumis sativus]
gi|115498325|gb|ABI98767.1| ribosomal protein S18 [Cucumis sativus]
Length = 104
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPIPS--GDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|322379198|ref|ZP_08053589.1| 30S ribosomal protein S18 [Helicobacter suis HS1]
gi|322379730|ref|ZP_08054043.1| 30S ribosomal protein S18 [Helicobacter suis HS5]
gi|321147879|gb|EFX42466.1| 30S ribosomal protein S18 [Helicobacter suis HS5]
gi|321148338|gb|EFX42847.1| 30S ribosomal protein S18 [Helicobacter suis HS1]
Length = 85
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 6 YSKRYCKYTEAKIEFIDYKDLELLKHSLSERYKIMPRRLTGNSKKWQERVEVAIKRARHM 65
Query: 76 GLIAYV 81
LI Y+
Sbjct: 66 ALIPYI 71
>gi|284034855|ref|YP_003384786.1| 30S ribosomal protein S18 [Kribbella flavida DSM 17836]
gi|283814148|gb|ADB35987.1| ribosomal protein S18 [Kribbella flavida DSM 17836]
Length = 77
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C A +DYKD LL +F+S RGKI R++ + QR++A AIK AR +
Sbjct: 9 KKKVCGFCKDKATYVDYKDTALLRKFISDRGKIRARRVTGNCVQHQRDVATAIKNAREVA 68
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 69 LLPYTS 74
>gi|315453471|ref|YP_004073741.1| 30S ribosomal protein S18 [Helicobacter felis ATCC 49179]
gi|315132523|emb|CBY83151.1| 30S ribosomal protein S18 [Helicobacter felis ATCC 49179]
Length = 84
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + AIKRAR++
Sbjct: 6 YSKRYCKYTEAKIEFIDYKDLELLRYSLSERYKIMPRRLTGNSKKWQERVEVAIKRARHM 65
Query: 76 GLIAYV 81
LI YV
Sbjct: 66 ALIPYV 71
>gi|88854480|ref|ZP_01129147.1| 30S ribosomal protein S18 [marine actinobacterium PHSC20C1]
gi|88816288|gb|EAR26143.1| 30S ribosomal protein S18 [marine actinobacterium PHSC20C1]
Length = 87
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +F+S+RGKI RI+ VS ++QR +A A+K AR + L+ Y
Sbjct: 33 IDYKDVATLRKFISERGKIRARRITGVSVQEQRLIATAVKNAREMALLPYAG 84
>gi|242620110|ref|YP_003002114.1| 30S ribosomal protein S18 [Aureococcus anophagefferens]
gi|239997355|gb|ACS36878.1| 30S ribosomal protein S18 [Aureococcus anophagefferens]
Length = 67
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ D+ DI+ L ++ + +I+P RI+ +S K QR+L KA+KRAR LGL+ +
Sbjct: 11 KFDFTDIQTLAEYMDDQQRILPRRITELSIKNQRQLTKAVKRARLLGLLPFT 62
>gi|290487238|gb|ADD30003.1| ribosomal protein S18 [Dillenia indica]
Length = 101
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRFITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|260780684|ref|YP_003227024.1| 30S ribosomal protein S18 [Bryopsis hypnoides]
gi|260176762|gb|ACX33771.1| 30S ribosomal protein S18 [Bryopsis hypnoides]
Length = 76
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 40/51 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++YK+I LL +F+S GKI+P R++ ++ K+QR+++KAIK AR +G + ++
Sbjct: 15 LNYKNILLLRKFISPEGKILPRRLTGLNTKQQRKISKAIKNARIMGFLPFI 65
>gi|169627435|ref|YP_001701084.1| 30S ribosomal protein S18 [Mycobacterium abscessus ATCC 19977]
gi|169239402|emb|CAM60430.1| 30S ribosomal protein S18.2 [Mycobacterium abscessus]
Length = 82
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
G +DYKD L FLS+RGKI R++ ++ ++QR++A AIK AR + L+ Y
Sbjct: 28 GVSSVDYKDTNTLRMFLSERGKIRSRRVTGLTVQQQRQVANAIKNAREMALLPY 81
>gi|159106815|ref|YP_001531235.1| ribosomal protein S18 [Cuscuta obtusiflora]
gi|205831386|sp|A8W3K5|RR18_CUSOB RecName: Full=Plastid 30S ribosomal protein S18
gi|158142539|gb|ABW20580.1| ribosomal protein S18 [Cuscuta obtusiflora]
Length = 149
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ RIDY++I +L RF+SQ+GKI+ R++ ++ K+QR L AIK+AR L + + N
Sbjct: 23 QSGDRIDYQNIDVLRRFISQQGKILSRRVNRLTLKQQRLLNLAIKQARILSFLPFTN 79
>gi|253729578|ref|YP_003029761.1| ribosomal protein S18 [Bambusa oldhamii]
gi|255961404|ref|YP_003097597.1| ribosomal protein S18 [Dendrocalamus latiflorus]
gi|246367088|gb|ACS94699.1| ribosomal protein S18 [Bambusa oldhamii]
gi|255040281|gb|ACT99941.1| ribosomal protein S18 [Dendrocalamus latiflorus]
Length = 170
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G P IDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 54 PRIGPGDP-IDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 112
Query: 82 N 82
N
Sbjct: 113 N 113
>gi|194335288|ref|YP_002017082.1| ribosomal protein S18 [Pelodictyon phaeoclathratiforme BU-1]
gi|194307765|gb|ACF42465.1| ribosomal protein S18 [Pelodictyon phaeoclathratiforme BU-1]
Length = 92
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 37 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLAVIPYV 87
>gi|110598896|ref|ZP_01387145.1| ribosomal protein S18 [Chlorobium ferrooxidans DSM 13031]
gi|110339487|gb|EAT58013.1| ribosomal protein S18 [Chlorobium ferrooxidans DSM 13031]
Length = 92
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L +I YV
Sbjct: 37 FDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLAVIPYV 87
>gi|111022580|ref|YP_705552.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|123045681|sp|Q0S4Z2|RS182_RHOSR RecName: Full=30S ribosomal protein S18 2
gi|110822110|gb|ABG97394.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
Length = 84
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K PL +DYKDI LL F+S RGKI R++ ++ ++QR++A A+K AR + L+
Sbjct: 20 KKNPLFAAKIEHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALL 79
Query: 79 AYVN 82
+ +
Sbjct: 80 PFTS 83
>gi|78043292|ref|YP_358909.1| 30S ribosomal protein S18 [Carboxydothermus hydrogenoformans
Z-2901]
gi|123729631|sp|Q3AG25|RS18_CARHZ RecName: Full=30S ribosomal protein S18
gi|77995407|gb|ABB14306.1| ribosomal protein S18 [Carboxydothermus hydrogenoformans Z-2901]
Length = 76
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C +DYKD+ L +++++RGKI+P RIS + QR L AIKRAR +
Sbjct: 10 KKRVCAFCVDKIVDVDYKDVNRLKKYITERGKILPRRISGNCARHQRRLTTAIKRARIMA 69
Query: 77 LIAYV 81
L+ +
Sbjct: 70 LLPFT 74
>gi|162455220|ref|YP_001617587.1| hypothetical protein sce6938 [Sorangium cellulosum 'So ce 56']
gi|205617507|sp|A9GXK6|RS18_SORC5 RecName: Full=30S ribosomal protein S18
gi|161165802|emb|CAN97107.1| rpsR [Sorangium cellulosum 'So ce 56']
Length = 106
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 3 EVAPTPLLRRNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSV 57
+ TP L + RR++ C A IDYKD + L F+S+RGK+VP RIS
Sbjct: 20 DFGRTPDLNADAPGRRRTGRKRVCRYCADKALVIDYKDPQALKYFISERGKVVPRRISGN 79
Query: 58 SHKKQRELAKAIKRARYLGLIAYV 81
+ QR++ +IKRAR + L+ +
Sbjct: 80 CARHQRKVTLSIKRARNIALLPFT 103
>gi|295697816|ref|YP_003591054.1| ribosomal protein S18 [Bacillus tusciae DSM 2912]
gi|295413418|gb|ADG07910.1| ribosomal protein S18 [Bacillus tusciae DSM 2912]
Length = 76
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C R+DYKD L +++++RGKI+P RIS + QR++ A+KRAR + L+ Y
Sbjct: 14 CNFCVDKIDRVDYKDADRLRKYMTERGKILPRRISGNCARHQRQVTVAVKRARQVALLPY 73
>gi|332800523|ref|YP_004462022.1| 30S ribosomal protein S18 [Tepidanaerobacter sp. Re1]
gi|332698258|gb|AEE92715.1| 30S ribosomal protein S18 [Tepidanaerobacter sp. Re1]
Length = 74
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYK+ L +++++RGKI+P RI+ K QR+L AIKRAR L
Sbjct: 8 KKKVCSFCVDKVDHIDYKEYARLRKYITERGKILPRRITGNCAKHQRQLTIAIKRARNLA 67
Query: 77 LIAYV 81
L+ +
Sbjct: 68 LLPFT 72
>gi|323698324|ref|ZP_08110236.1| ribosomal protein S18 [Desulfovibrio sp. ND132]
gi|323458256|gb|EGB14121.1| ribosomal protein S18 [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + R+K C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FRKKFTPRKKFCRFCADAELPLDYKRPDILRDFVTERGKIIARRITGTCAKHQRRLTNEI 62
Query: 70 KRARYLGLIAYVNL 83
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTTV 76
>gi|226307893|ref|YP_002767853.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229495114|ref|ZP_04388860.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
gi|226187010|dbj|BAH35114.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229318045|gb|EEN83920.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
Length = 85
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K PL +DYKDI LL F+S RGKI R++ ++ ++QR++A A+K AR + L+
Sbjct: 20 KKNPLFAAKITHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALL 79
Query: 79 AYV 81
+
Sbjct: 80 PFT 82
>gi|156598372|gb|ABU85446.1| ribosomal protein S18 [Musa acuminata]
Length = 101
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|94984272|ref|YP_603636.1| 30S ribosomal protein S18 [Deinococcus geothermalis DSM 11300]
gi|122986733|sp|Q1J217|RS18_DEIGD RecName: Full=30S ribosomal protein S18
gi|94554553|gb|ABF44467.1| ribosomal protein S18 [Deinococcus geothermalis DSM 11300]
Length = 91
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+++L RF+S GKI+P R + +S K QR +++ IK AR L L+ Y
Sbjct: 36 DYKDVKMLRRFISDTGKILPRRRTGLSAKHQRRISQTIKIARQLALLPYTE 86
>gi|290487276|gb|ADD30022.1| ribosomal protein S18 [Plumbago auriculata]
Length = 95
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ + RIDY++I L+NRFLS++GKI+ R + ++ K+QR + AIK+AR L
Sbjct: 15 FRRRLPPI--QSGDRIDYRNISLMNRFLSEQGKILSRRRNKLTLKQQRLITIAIKQARIL 72
Query: 76 GLIAYVN 82
L+ + N
Sbjct: 73 SLLPFRN 79
>gi|225544145|ref|YP_002720134.1| rps18 [Jatropha curcas]
gi|224979586|gb|ACN72713.1| rps18 [Jatropha curcas]
Length = 108
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ +S K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLSLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|290487256|gb|ADD30012.1| ribosomal protein S18 [Ximenia americana]
Length = 104
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 65 AIKQARILSSLPFLN 79
>gi|115391923|ref|YP_778511.1| ribosomal protein S18 [Jasminum nudiflorum]
gi|122164952|sp|Q06RB0|RR18_JASNU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110456244|gb|ABG74649.1| ribosomal protein S18 [Jasminum nudiflorum]
Length = 231
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ID+ + LLN+F+SQ+GKI+P +++ ++ K+QR + AIK+AR L L+
Sbjct: 34 QIDFTNTSLLNQFISQQGKILPRKVTRLTLKQQRFMTSAIKQARILSLL 82
>gi|325972886|ref|YP_004249950.1| 30S ribosomal protein S18 [Mycoplasma suis str. Illinois]
gi|323651488|gb|ADX97570.1| 30S ribosomal protein S18 [Mycoplasma suis str. Illinois]
Length = 124
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C L +G IDYKD L +L + K++ +IS K Q +L++AIKRARY+ L
Sbjct: 59 KKVCWLCRRGILTIDYKDTEFLKNYLKRYNKVLIHKISGNCLKHQHQLSQAIKRARYIAL 118
Query: 78 IAYV 81
+ +V
Sbjct: 119 LPFV 122
>gi|298243927|ref|ZP_06967734.1| ribosomal protein S18 [Ktedonobacter racemifer DSM 44963]
gi|297556981|gb|EFH90845.1| ribosomal protein S18 [Ktedonobacter racemifer DSM 44963]
Length = 97
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 19 KSCPLSGKGAPRIDYKDI-RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C IDYKD R + R++S RGKI P R + K QR L+ +IK+ARY+ L
Sbjct: 27 KICQFCHDHVREIDYKDASRFMKRYISDRGKIEPRRKTGTCAKHQRGLSTSIKQARYMAL 86
Query: 78 IAYV 81
+ Y
Sbjct: 87 LPYT 90
>gi|297519373|ref|ZP_06937759.1| 30S ribosomal protein S18 [Escherichia coli OP50]
Length = 50
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
I L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +
Sbjct: 1 IATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTD 47
>gi|327273057|ref|XP_003221299.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Anolis
carolinensis]
Length = 136
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +DYK+I+LL++F+S G+I I+ + KKQ EL+KAI+RAR G+
Sbjct: 58 KKCILCGM---TLDYKNIQLLSQFVSPYTGRIFGRHITGLCEKKQSELSKAIRRARKTGM 114
Query: 78 IAYVNL 83
+ + N+
Sbjct: 115 VPFYNM 120
>gi|326428552|gb|EGD74122.1| 30S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
Length = 165
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELA 66
P R V+ +CP + IDYK++R L++F+S Q G+I+ + + K QR++A
Sbjct: 73 PETAREVTQGCPACPYKEE----IDYKNVRFLSQFVSPQTGQILRRSSTGLCSKAQRKIA 128
Query: 67 KAIKRARYLGLIAYV 81
KAIKR+R+ GL+ +V
Sbjct: 129 KAIKRSRHFGLMPHV 143
>gi|189345698|ref|YP_001942227.1| 30S ribosomal protein S18 [Chlorobium limicola DSM 245]
gi|189339845|gb|ACD89248.1| ribosomal protein S18 [Chlorobium limicola DSM 245]
Length = 87
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ +S K Q L ++K AR+L +I YV
Sbjct: 32 FDYRDERKLKRFINDQGKIIPRRITGLSAKDQNLLTHSVKWARFLAVIPYV 82
>gi|166235745|gb|ABY85651.1| ribosomal protein S18 [Silene cryptoneura]
Length = 101
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P S + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRR-LP-SIQPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITI 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|114568043|ref|YP_755197.1| 30S ribosomal protein S18 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338978|gb|ABI69826.1| SSU ribosomal protein S18P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 74
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYK+I L R++++RGKI+P RI+ QR+L AIKRAR + L+
Sbjct: 11 QCNWCADKIEVVDYKEIPRLRRYITERGKILPRRITGNCAHHQRQLTVAIKRARIMALLP 70
Query: 80 YVN 82
Y +
Sbjct: 71 YTS 73
>gi|313678624|ref|YP_004056364.1| 30S ribosomal protein S18 [Mycoplasma bovis PG45]
gi|312950259|gb|ADR24854.1| ribosomal protein S18 [Mycoplasma bovis PG45]
Length = 108
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+ C L +DYK++ + +F+S G+I P + + QR++A AIKRAR++ L
Sbjct: 14 RRKCELCETNIEYVDYKNVEFITKFISGIGQIKPHASTGTCARHQRKVANAIKRARFMAL 73
Query: 78 IAYV 81
I Y
Sbjct: 74 IPYT 77
>gi|297563757|ref|YP_003682731.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848205|gb|ADH70225.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 78
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD LL +F+S+RGKI R++ + QR++A AIK AR + L+ Y
Sbjct: 14 CLFCQEKQSYIDYKDTTLLRKFISERGKIRARRVTGNCTQHQRDVATAIKNAREVALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|296141832|ref|YP_003649075.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
gi|296029966|gb|ADG80736.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
Length = 85
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C + +IDYKD LL RFLS+RGKI R++ + QR++A A+K +R + L+
Sbjct: 19 KACTFCKEKNIKIDYKDTTLLRRFLSERGKIRSRRVTGNCVQHQRDVAIAVKNSREVALL 78
Query: 79 AYVN 82
+ +
Sbjct: 79 PFTS 82
>gi|110456774|gb|ABG74861.1| ribosomal protein S18 [Menodora longiflora]
Length = 123
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ID+ + LLN+F+SQ+GKI+ R++ ++ K+QR + AIK+AR L L+ +V+
Sbjct: 35 QIDFTNTSLLNQFISQQGKILSRRVTRLTLKQQRLMTIAIKQARILALLPFVS 87
>gi|69216275|gb|AAZ03918.1| ribosomal protein S18 [Yucca schidigera]
Length = 101
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 43/57 (75%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 23 ESGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|114329678|ref|YP_740497.1| ribosomal protein S18 [Citrus sinensis]
gi|122166161|sp|Q09MF6|RR18_CITSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113952644|gb|ABI49042.1| ribosomal protein S18 [Citrus sinensis]
Length = 101
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RFLS++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMTLISRFLSEQGKILSRRVNRLTLKEQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|296271508|ref|YP_003654140.1| 30S ribosomal protein S18 [Thermobispora bispora DSM 43833]
gi|296094295|gb|ADG90247.1| ribosomal protein S18 [Thermobispora bispora DSM 43833]
Length = 78
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + +DYKD LL +F+S RGKI R++ + QR++A AIK AR +
Sbjct: 10 KKKVCLFCHEKISYVDYKDTALLRKFISDRGKIRARRVTGNCTQHQRDVATAIKNAREMA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|78186006|ref|YP_374049.1| 30S ribosomal protein S18 [Chlorobium luteolum DSM 273]
gi|123771144|sp|Q3B6M5|RS18_PELLD RecName: Full=30S ribosomal protein S18
gi|78165908|gb|ABB23006.1| SSU ribosomal protein S18P [Chlorobium luteolum DSM 273]
Length = 90
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DY+D R L RF++ +GKI+P RI+ ++ K+Q L ++K AR+L +I YV
Sbjct: 35 FDYRDERKLKRFINDQGKIIPRRITGLTAKEQNLLTHSVKWARFLAVIPYV 85
>gi|297627497|ref|YP_003689260.1| 30S ribosomal protein S18 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923262|emb|CBL57859.1| 30S ribosomal protein S18 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 79
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD LL RF+S+RGKI R++ +S + Q ++A AIK AR L L+ Y
Sbjct: 25 VDYKDTTLLRRFISERGKIRARRVTGLSVQDQSKVAMAIKNARELALLPYTT 76
>gi|291277457|ref|YP_003517229.1| 30S ribosomal protein S18 [Helicobacter mustelae 12198]
gi|290964651|emb|CBG40506.1| 30S ribosomal protein S18 [Helicobacter mustelae 12198]
Length = 84
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
++ C + IDYKD+ +L LS+R KI+P R++ + K Q + AIKRAR++ L
Sbjct: 8 KRYCKYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNTKKWQERVEVAIKRARHMAL 67
Query: 78 IAYV 81
I Y+
Sbjct: 68 IPYI 71
>gi|166235591|gb|ABY85504.1| ribosomal protein S18 [Silene littorea]
Length = 101
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ + RIDY++ ++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 7 PFIKSKRSFRRRLPPI--QPGDRIDYRNXSXISRFISEQGKILXRRVNRLTLKQQRLITX 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L L+ ++N
Sbjct: 65 AIKQARILSLLPFLN 79
>gi|269118806|ref|YP_003306983.1| ribosomal protein S18 [Sebaldella termitidis ATCC 33386]
gi|268612684|gb|ACZ07052.1| ribosomal protein S18 [Sebaldella termitidis ATCC 33386]
Length = 74
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++A AIKR+R + L+ Y +
Sbjct: 20 INYKNVELLKNFMNDKGKISPARVTGLDAKIQRKIAAAIKRSRQIALLPYTKI 72
>gi|297622258|ref|YP_003703692.1| 30S ribosomal protein S18 [Truepera radiovictrix DSM 17093]
gi|297163438|gb|ADI13149.1| ribosomal protein S18 [Truepera radiovictrix DSM 17093]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP DY+D R+L RF+S KI+P R + V K QR LA IK+AR L ++
Sbjct: 26 KVCPFCTGEQEVTDYRDGRMLRRFISDTAKILPRRRTGVCAKHQRRLATTIKQARVLAIV 85
>gi|313902809|ref|ZP_07836206.1| SSU ribosomal protein S18P [Thermaerobacter subterraneus DSM
13965]
gi|313466929|gb|EFR62446.1| SSU ribosomal protein S18P [Thermaerobacter subterraneus DSM
13965]
Length = 75
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD L +FL++RGKI+P RI+ QR+L +AIKRAR + L+ +
Sbjct: 23 VDYKDSARLRKFLTERGKILPRRITGNCAGHQRQLTRAIKRARIMALLPFT 73
>gi|118619879|ref|YP_908211.1| 30S ribosomal protein S18 [Mycobacterium ulcerans Agy99]
gi|183980320|ref|YP_001848611.1| ribosomal protein S18 RpsR2 [Mycobacterium marinum M]
gi|205556568|sp|B2HKQ1|RS182_MYCMM RecName: Full=30S ribosomal protein S18 2
gi|205556605|sp|A0PWM1|RS182_MYCUA RecName: Full=30S ribosomal protein S18 2
gi|118571989|gb|ABL06740.1| ribosomal protein S18 RpsR2 [Mycobacterium ulcerans Agy99]
gi|183173646|gb|ACC38756.1| ribosomal protein S18 RpsR2 [Mycobacterium marinum M]
Length = 87
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
L G +DYKDI L F+S RGKI R++ ++ ++QR++A AIK AR + L+ Y
Sbjct: 24 LDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTVQQQRQIATAIKNAREMALLPY 81
>gi|145218999|ref|YP_001129708.1| 30S ribosomal protein S18 [Prosthecochloris vibrioformis DSM 265]
gi|205616745|sp|A4SCJ7|RS18_PROVI RecName: Full=30S ribosomal protein S18
gi|145205163|gb|ABP36206.1| SSU ribosomal protein S18P [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+D R L RF++ +GK++P RI+ +S K+Q L ++K AR+L +I YV+
Sbjct: 35 FDYRDERKLKRFINDQGKMIPRRITGLSAKEQNLLTHSVKWARFLAVIPYVS 86
>gi|226365087|ref|YP_002782870.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
gi|226243577|dbj|BAH53925.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
Length = 84
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K PL +DYKDI LL F+S RGKI R++ ++ ++QR++A A+K AR + L+
Sbjct: 20 KKNPLFAAKIEYVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALL 79
Query: 79 AYVN 82
+ +
Sbjct: 80 PFTS 83
>gi|13518460|ref|NP_084820.1| ribosomal protein S18 [Lotus japonicus]
gi|20978734|sp|Q9BBR1|RR18_LOTJA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|13359001|dbj|BAB33218.1| ribosomal protein S18 [Lotus japonicus]
Length = 104
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 15 FRRRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARIL 72
Query: 76 GLIAYVN 82
+ ++N
Sbjct: 73 SSLPFIN 79
>gi|148377544|ref|YP_001256420.1| 30S ribosomal protein S18 [Mycoplasma agalactiae PG2]
gi|205558356|sp|A5IY67|RS18_MYCAP RecName: Full=30S ribosomal protein S18
gi|148291590|emb|CAL58976.1| 30S ribosomal protein S18 [Mycoplasma agalactiae PG2]
Length = 107
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+ C L +DYK++ + +F+S G+I P + + QR++A AIKRAR++ L
Sbjct: 14 RRKCELCETNIEYVDYKNVEFITKFISGIGQIKPHVSTGTCARHQRKVANAIKRARFMAL 73
Query: 78 IAYV 81
I Y
Sbjct: 74 IPYT 77
>gi|291320202|ref|YP_003515463.1| 30S ribosomal protein S18 [Mycoplasma agalactiae]
gi|290752534|emb|CBH40506.1| 30S ribosomal protein S18 [Mycoplasma agalactiae]
Length = 107
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+ C L +DYK++ + +F+S G+I P + + QR++A AIKRAR++ L
Sbjct: 14 RRKCELCETNIEYVDYKNVEFITKFISGIGQIKPHVSTGTCARHQRKVANAIKRARFMAL 73
Query: 78 IAYV 81
I Y
Sbjct: 74 IPYT 77
>gi|325282628|ref|YP_004255169.1| 30S ribosomal protein S18 [Deinococcus proteolyticus MRP]
gi|324314437|gb|ADY25552.1| 30S ribosomal protein S18 [Deinococcus proteolyticus MRP]
Length = 88
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD+++L RF+S GKI+P R + +S K QR +++ IK AR + L+ Y
Sbjct: 33 DYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRISQTIKVARQMALLPYTE 83
>gi|11466812|ref|NP_039408.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|12009|emb|CAA33970.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|226631|prf||1603356BE ribosomal protein S18
Length = 163
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|237688462|ref|YP_002905081.1| ribosomal protein S18 [Picea sitchensis]
gi|226875291|gb|ACO89030.1| ribosomal protein S18 [Picea sitchensis]
Length = 96
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 30 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLITNAIKRARIPS 87
Query: 77 LIAYV 81
L+ ++
Sbjct: 88 LLPFL 92
>gi|50233994|ref|YP_052772.1| ribosomal protein S18 [Oryza nivara]
gi|109156610|ref|YP_654229.1| ribosomal protein S18 [Oryza sativa Indica Group]
gi|62287427|sp|Q6ENF1|RR18_ORYNI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840848|sp|P0C475|RR18_ORYSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840851|sp|P0C476|RR18_ORYSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840852|sp|P0C477|RR18_ORYSJ RecName: Full=30S ribosomal protein S18, chloroplastic
gi|42795502|gb|AAS46069.1| ribosomal protein S18 [Oryza sativa Indica Group]
gi|42795569|gb|AAS46135.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|42795633|gb|AAS46198.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|49615018|dbj|BAD26801.1| ribosomal protein S18 [Oryza nivara]
gi|290790589|gb|ADD62849.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|290790658|gb|ADD62917.1| ribosomal protein S18 [Oryza meridionalis]
Length = 163
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|119718879|ref|YP_925844.1| 30S ribosomal protein S18 [Nocardioides sp. JS614]
gi|166220965|sp|A1SQS2|RS18_NOCSJ RecName: Full=30S ribosomal protein S18
gi|119539540|gb|ABL84157.1| SSU ribosomal protein S18P [Nocardioides sp. JS614]
Length = 78
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + A +DYKD LL +F+S RGKI R++ + QR++A A+K AR +
Sbjct: 10 KKKVCQFCKEKATGVDYKDTALLRKFISDRGKIRARRVTGNCVQHQRDVAIAVKNAREVA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|290790796|gb|ADD63053.1| ribosomal protein S18 [Potamophila parviflora]
Length = 163
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|269101121|ref|YP_003289269.1| 30S ribosomal protein S18 [Ectocarpus siliculosus]
gi|266631629|emb|CAV31300.1| Chloroplast 30S ribosomal protein S18 [Ectocarpus siliculosus]
gi|270118759|emb|CAT18850.1| Chloroplast 30S ribosomal protein S18 [Ectocarpus siliculosus]
Length = 107
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P K IDYK + +L F ++ GKI R ++++ K+QR+L+K+IKRARYL L+ +V
Sbjct: 43 PFKLKPTATIDYKQVDILLAFSTEHGKIKSRRSTNLTLKQQRQLSKSIKRARYLHLLPFV 102
>gi|290790727|gb|ADD62985.1| ribosomal protein S18 [Oryza australiensis]
Length = 163
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|152990910|ref|YP_001356632.1| 30S ribosomal protein S18 [Nitratiruptor sp. SB155-2]
gi|166220964|sp|A6Q466|RS18_NITSB RecName: Full=30S ribosomal protein S18
gi|151422771|dbj|BAF70275.1| 30S ribosomal protein S18 [Nitratiruptor sp. SB155-2]
Length = 91
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++++C + IDYKDI L+ LS+R KI+P R++ K Q + +AIKRAR+
Sbjct: 8 KKRTCKYCEQKVTFIDYKDIELIKHSLSERYKIMPRRLTGNCKKHQVMVEEAIKRARHAA 67
Query: 77 LIAYV 81
L+ Y+
Sbjct: 68 LVPYI 72
>gi|326329083|ref|ZP_08195412.1| ribosomal protein S18 [Nocardioidaceae bacterium Broad-1]
gi|325953165|gb|EGD45176.1| ribosomal protein S18 [Nocardioidaceae bacterium Broad-1]
Length = 78
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + A +DYKD LL +F+S RGKI R++ + QR++A A+K AR +
Sbjct: 10 KKKVCQFCKEKATGVDYKDATLLRKFISDRGKIRARRVTGNCVQHQRDVAIAVKNAREVA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|256374753|ref|YP_003098413.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
gi|255919056|gb|ACU34567.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
Length = 77
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+G +D+KD LL +FLS RGKI R++ ++ ++QR++A A+K AR + L+ Y
Sbjct: 18 EGVELVDWKDAALLRKFLSDRGKIRSRRVTGLTPQQQRQVATAVKNAREMALLPY 72
>gi|290790863|gb|ADD63119.1| ribosomal protein S18 [Microlaena stipoides]
Length = 163
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|11467022|ref|NP_041929.1| ribosomal protein S18 [Euglena gracilis]
gi|266968|sp|P30390|RR18_EUGGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|14383|emb|CAA77933.1| ribosomal protein S18 [Euglena gracilis]
gi|415772|emb|CAA50116.1| 30S ribosomal protein S18 [Euglena gracilis]
Length = 64
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRIS--SVSHKKQRELAKAIKRARYLGLIAY 80
IDYK++ +L RF++ +GKI+P R++ +++K+ R L K++K+ARYLGL+ +
Sbjct: 7 IDYKNVNILRRFINFQGKIIPKRLNKPKLTYKQHRLLRKSVKQARYLGLLPF 58
>gi|315446363|ref|YP_004079242.1| 30S ribosomal protein S18P [Mycobacterium sp. Spyr1]
gi|205562361|sp|A4T5Z8|RS182_MYCGI RecName: Full=30S ribosomal protein S18 2
gi|315264666|gb|ADU01408.1| SSU ribosomal protein S18P [Mycobacterium sp. Spyr1]
Length = 79
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP P RRN+ + G R+DYKD L +FLS+RGKI ++ ++ ++QR+
Sbjct: 8 APLPKKRRNM--------FAQLGIERVDYKDTSTLRQFLSERGKIRSRTVTGLTVQQQRQ 59
Query: 65 LAKAIKRARYLGLIAY 80
+ A+K AR + L+ Y
Sbjct: 60 VTIAVKNAREMALLPY 75
>gi|188528034|ref|YP_001910721.1| 30S ribosomal protein S18 [Helicobacter pylori Shi470]
gi|229559990|sp|B2UV09|RS18_HELPS RecName: Full=30S ribosomal protein S18
gi|188144274|gb|ACD48691.1| 30S ribosomal protein S18 [Helicobacter pylori Shi470]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRAR++ L
Sbjct: 8 KRYCKYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRARHMAL 67
Query: 78 IAYV 81
I Y+
Sbjct: 68 IPYI 71
>gi|1350882|sp|P49170|RR18_SECCE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1054841|emb|CAA57883.1| chloroplast ribosomal protein S18 [Secale cereale]
Length = 170
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 54 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 112
Query: 82 N 82
N
Sbjct: 113 N 113
>gi|294155691|ref|YP_003560075.1| 30S ribosomal protein S18 [Mycoplasma crocodyli MP145]
gi|291600476|gb|ADE19972.1| 30S ribosomal protein S18 [Mycoplasma crocodyli MP145]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
++C IDYKD+ L ++++ G+I P S K QR++A AIKRARY+ +
Sbjct: 15 RACEFCENHVQYIDYKDVETLKKYINATGQIKPKANSGACAKHQRKIASAIKRARYIAFL 74
Query: 79 AYV 81
Y
Sbjct: 75 PYT 77
>gi|194033314|ref|YP_002000407.1| ribosomal protein S18 [Oedogonium cardiacum]
gi|186968931|gb|ACC97254.1| ribosomal protein S18 [Oedogonium cardiacum]
Length = 165
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL ++S GKI+P R + V+ K+QR L KAIK AR LGL+ +V
Sbjct: 107 IDYKNRSLLQEYISFDGKILPKRKTGVTTKQQRFLTKAIKTARILGLLPFV 157
>gi|15612230|ref|NP_223883.1| 30S ribosomal protein S18 [Helicobacter pylori J99]
gi|15645858|ref|NP_208036.1| 30S ribosomal protein S18 [Helicobacter pylori 26695]
gi|108563612|ref|YP_627928.1| 30S ribosomal protein S18 [Helicobacter pylori HPAG1]
gi|207092389|ref|ZP_03240176.1| 30S ribosomal protein S18 [Helicobacter pylori HPKX_438_AG0C1]
gi|208435139|ref|YP_002266805.1| ribosomal protein S18 [Helicobacter pylori G27]
gi|210135403|ref|YP_002301842.1| 30S ribosomal protein S18 [Helicobacter pylori P12]
gi|217032303|ref|ZP_03437799.1| hypothetical protein HPB128_132g1 [Helicobacter pylori B128]
gi|217033565|ref|ZP_03438993.1| hypothetical protein HP9810_899g1 [Helicobacter pylori 98-10]
gi|254779787|ref|YP_003057893.1| 30S ribosomal protein S18 [Helicobacter pylori B38]
gi|298735732|ref|YP_003728257.1| 30S ribosomal protein S18 [Helicobacter pylori B8]
gi|308183354|ref|YP_003927481.1| 30S ribosomal protein S18 [Helicobacter pylori PeCan4]
gi|308184991|ref|YP_003929124.1| 30S ribosomal protein S18 [Helicobacter pylori SJM180]
gi|54039412|sp|P66460|RS18_HELPJ RecName: Full=30S ribosomal protein S18
gi|54042147|sp|P66459|RS18_HELPY RecName: Full=30S ribosomal protein S18
gi|123073734|sp|Q1CS18|RS18_HELPH RecName: Full=30S ribosomal protein S18
gi|229559988|sp|B6JN84|RS18_HELP2 RecName: Full=30S ribosomal protein S18
gi|229559989|sp|B5Z8P0|RS18_HELPG RecName: Full=30S ribosomal protein S18
gi|2314410|gb|AAD08290.1| ribosomal protein S18 (rps18) [Helicobacter pylori 26695]
gi|4155773|gb|AAD06750.1| 30S RIBOSOMAL PROTEIN S18 [Helicobacter pylori J99]
gi|107837385|gb|ABF85254.1| ribosomal protein S18 [Helicobacter pylori HPAG1]
gi|208433068|gb|ACI27939.1| ribosomal protein S18 [Helicobacter pylori G27]
gi|210133371|gb|ACJ08362.1| 30S ribosomal protein S18 [Helicobacter pylori P12]
gi|216943911|gb|EEC23345.1| hypothetical protein HP9810_899g1 [Helicobacter pylori 98-10]
gi|216945969|gb|EEC24583.1| hypothetical protein HPB128_132g1 [Helicobacter pylori B128]
gi|254001699|emb|CAX29930.1| 30S ribosomal subunit protein S18 [Helicobacter pylori B38]
gi|261838567|gb|ACX98333.1| ribosomal protein S18 [Helicobacter pylori 51]
gi|261839963|gb|ACX99728.1| 30S ribosomal protein S18 [Helicobacter pylori 52]
gi|297380424|gb|ADI35311.1| ribosomal protein S18 [Helicobacter pylori v225d]
gi|298354921|emb|CBI65793.1| small subunit ribosomal protein S18 [Helicobacter pylori B8]
gi|308060911|gb|ADO02807.1| 30S ribosomal protein S18 [Helicobacter pylori SJM180]
gi|308062527|gb|ADO04415.1| 30S ribosomal protein S18 [Helicobacter pylori Cuz20]
gi|308064024|gb|ADO05911.1| 30S ribosomal protein S18 [Helicobacter pylori Sat464]
gi|308065539|gb|ADO07431.1| 30S ribosomal protein S18 [Helicobacter pylori PeCan4]
gi|315587135|gb|ADU41516.1| 30S ribosomal protein S18 [Helicobacter pylori 35A]
gi|317009928|gb|ADU80508.1| 30S ribosomal protein S18 [Helicobacter pylori India7]
gi|317011444|gb|ADU85191.1| 30S ribosomal protein S18 [Helicobacter pylori SouthAfrica7]
gi|317013030|gb|ADU83638.1| 30S ribosomal protein S18 [Helicobacter pylori Lithuania75]
gi|317014635|gb|ADU82071.1| 30S ribosomal protein S18 [Helicobacter pylori Gambia94/24]
gi|317177986|dbj|BAJ55775.1| 30S ribosomal protein S18 [Helicobacter pylori F16]
gi|317178462|dbj|BAJ56250.1| 30S ribosomal protein S18 [Helicobacter pylori F30]
gi|317180970|dbj|BAJ58756.1| 30S ribosomal protein S18 [Helicobacter pylori F32]
gi|317182493|dbj|BAJ60277.1| 30S ribosomal protein S18 [Helicobacter pylori F57]
gi|325996519|gb|ADZ51924.1| 30S ribosomal protein S18 [Helicobacter pylori 2018]
gi|325998107|gb|ADZ50315.1| 30S ribosomal protein S18 [Helicobacter pylori 2017]
gi|332674047|gb|AEE70864.1| 30S ribosomal protein S18 [Helicobacter pylori 83]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRAR++ L
Sbjct: 8 KRYCKYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRARHMAL 67
Query: 78 IAYV 81
I Y+
Sbjct: 68 IPYI 71
>gi|91214164|ref|YP_538786.1| ribosomal protein S18 [Glycine max]
gi|122245075|sp|Q2PMR2|RR18_SOYBN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|83595765|gb|ABC25146.1| ribosomal protein S18 [Glycine max]
Length = 103
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYKNMGLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|271970520|ref|YP_003344716.1| 30S ribosomal protein S18 [Streptosporangium roseum DSM 43021]
gi|270513695|gb|ACZ91973.1| 30S ribosomal protein S18 [Streptosporangium roseum DSM 43021]
Length = 78
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C +DYKD LL +F+S RGKI R++ + QR++A AIK AR +
Sbjct: 10 KKKVCLFCHDKISYVDYKDTALLRKFISDRGKIRARRVTGNCTQHQRDVATAIKNAREMA 69
Query: 77 LIAYVN 82
L+ Y++
Sbjct: 70 LLPYMS 75
>gi|118430409|ref|YP_874674.1| ribosomal protein S18 [Hordeum vulgare subsp. vulgare]
gi|205831393|sp|A1E9L2|RR18_HORVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201063|gb|ABK79434.1| ribosomal protein S18 [Hordeum vulgare subsp. vulgare]
Length = 170
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 54 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 112
Query: 82 N 82
N
Sbjct: 113 N 113
>gi|194033169|ref|YP_002000507.1| ribosomal protein S18 [Brachypodium distachyon]
gi|193075577|gb|ACF08660.1| ribosomal protein S18 [Brachypodium distachyon]
Length = 163
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|14017593|ref|NP_114280.1| ribosomal protein S18 [Triticum aestivum]
gi|20978710|sp|Q95H55|RR18_WHEAT RecName: Full=30S ribosomal protein S18, chloroplastic
gi|13928226|dbj|BAB47055.1| ribosomal protein S18 [Triticum aestivum]
Length = 170
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 54 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 112
Query: 82 N 82
N
Sbjct: 113 N 113
>gi|302390766|ref|YP_003826587.1| SSU ribosomal protein S18P [Thermosediminibacter oceani DSM
16646]
gi|302201394|gb|ADL08964.1| SSU ribosomal protein S18P [Thermosediminibacter oceani DSM
16646]
Length = 74
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD+ L +F+++R KI+P RI+ + QR+L AIKRAR + L+ +
Sbjct: 12 CSFCMDKIDYIDYKDVARLRKFITERAKILPRRITGNCARHQRQLTVAIKRARNIALLPF 71
Query: 81 VN 82
+
Sbjct: 72 TS 73
>gi|298530249|ref|ZP_07017651.1| ribosomal protein S18 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509623|gb|EFI33527.1| ribosomal protein S18 [Desulfonatronospira thiodismutans ASO3-1]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C +DYK++ +L F++ RGKI+ RI+ K QR L IK+AR +
Sbjct: 9 RKKFCRFCASKENILDYKNVDMLKDFITDRGKIIARRITGNCAKHQRALTTEIKKARQMA 68
Query: 77 LIAYV 81
L+ Y
Sbjct: 69 LLYYT 73
>gi|114329990|ref|YP_740672.1| ribosomal protein S18 [Nandina domestica]
gi|122165940|sp|Q09FT9|RR18_NANDO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|114054492|gb|ABI49885.1| ribosomal protein S18 [Nandina domestica]
Length = 100
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 7 FLKSKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 64
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 65 IKQARILSSLPFLN 78
>gi|62287387|sp|Q5QA75|RR18_ACOGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|56122466|gb|AAV74358.1| Rps18 [Acorus gramineus]
Length = 101
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L R++ R+ P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 7 LFRKSKGSFRRRLPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILFSLPFLN 79
>gi|159106885|ref|YP_001531304.1| ribosomal protein S18 [Lolium perenne]
gi|205831400|sp|A8Y9A8|RR18_LOLPR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|158934419|emb|CAO85997.1| ribosomal protein S18 [Lolium perenne]
Length = 156
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 47 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 105
Query: 82 N 82
N
Sbjct: 106 N 106
>gi|118468979|ref|YP_890287.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
gi|205556395|sp|A0R549|RS181_MYCS2 RecName: Full=30S ribosomal protein S18 1
gi|118170266|gb|ABK71162.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
L G IDYKD+ +L FLS+RGKI ++ ++ ++QR++A AIK AR + L+
Sbjct: 24 LEALGVTTIDYKDVAVLRTFLSERGKIRSRHVTGLTPQQQRQVATAIKNAREMALL 79
>gi|114329768|ref|YP_740587.1| ribosomal protein S18 [Platanus occidentalis]
gi|122166014|sp|Q09G24|RR18_PLAOC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|114054406|gb|ABI49800.1| ribosomal protein S18 [Platanus occidentalis]
Length = 101
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI-GSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILSSLPFLN 79
>gi|34558166|ref|NP_907981.1| 30S ribosomal protein S18 [Wolinella succinogenes DSM 1740]
gi|59798816|sp|Q7MQZ9|RS18_WOLSU RecName: Full=30S ribosomal protein S18
gi|34483885|emb|CAE10881.1| HYPOTHETICAL PROTEIN-Ribosomal protein S18 [Wolinella
succinogenes]
Length = 85
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ +L LS+R KI+P R++ S + Q + AIKRAR++
Sbjct: 7 YSKRYCKYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNSKRWQERVEVAIKRARHM 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|145356574|ref|XP_001422503.1| Putative mitochondrial ribosomal protein S18 [Ostreococcus
lucimarinus CCE9901]
gi|144582746|gb|ABP00820.1| Putative mitochondrial ribosomal protein S18 [Ostreococcus
lucimarinus CCE9901]
Length = 76
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
R Y+D R L +F+S GKI P R VS K QR++A+AIK AR +G++ Y +
Sbjct: 13 RAAYEDARFLTQFVSDTGKIYPKRRLGVSAKAQRKIARAIKTARQMGILPYTS 65
>gi|118430324|ref|YP_874758.1| ribosomal protein S18 [Agrostis stolonifera]
gi|125987694|sp|A1EA30|RR18_AGRST RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201233|gb|ABK79602.1| ribosomal protein S18 [Agrostis stolonifera]
Length = 169
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 54 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFR 112
Query: 82 N 82
N
Sbjct: 113 N 113
>gi|301753317|ref|XP_002912508.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281346798|gb|EFB22382.1| hypothetical protein PANDA_000252 [Ailuropoda melanoleuca]
Length = 143
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +GL
Sbjct: 64 KKCILCGK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGL 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|309791184|ref|ZP_07685716.1| ribosomal protein S18 [Oscillochloris trichoides DG6]
gi|308226746|gb|EFO80442.1| ribosomal protein S18 [Oscillochloris trichoides DG6]
Length = 90
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 17 RRKSCPLSGKGA-PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ C + G P DYKDI+ L ++++ +GKI+P R + V+ K QR L+ AIKRAR+L
Sbjct: 21 RRRECEFTKLGILP--DYKDIKRLQKYVTAQGKILPRRRTGVTAKMQRRLSIAIKRARHL 78
Query: 76 GLI 78
L+
Sbjct: 79 ALL 81
>gi|169794095|ref|YP_001718459.1| ribosomal protein S18 [Manihot esculenta]
gi|205831401|sp|B1NWH2|RR18_MANES RecName: Full=30S ribosomal protein S18, chloroplastic
gi|157695907|gb|ABV66176.1| ribosomal protein S18 [Manihot esculenta]
Length = 94
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ +S K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLSLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|330836667|ref|YP_004411308.1| 30S ribosomal protein S18P [Spirochaeta coccoides DSM 17374]
gi|329748570|gb|AEC01926.1| SSU ribosomal protein S18P [Spirochaeta coccoides DSM 17374]
Length = 95
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R+K C + DYK+ LL RF+++RGKI+P RI+ K QR L A+K
Sbjct: 24 RRPGGFRKKVCKFTQMNVT-PDYKNPDLLRRFITERGKILPRRITGTCAKNQRALTLAVK 82
Query: 71 RARYLGLIAY 80
RAR L + +
Sbjct: 83 RARVLAYLPF 92
>gi|313199724|ref|YP_004021338.1| ribosomal protein S18 [Theobroma cacao]
gi|309321288|gb|ADO64831.1| ribosomal protein S18 [Theobroma cacao]
gi|328924802|gb|ADO64912.2| ribosomal protein S18 [Theobroma cacao]
Length = 101
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|195952827|ref|YP_002121117.1| ribosomal protein S18 [Hydrogenobaculum sp. Y04AAS1]
gi|195932439|gb|ACG57139.1| ribosomal protein S18 [Hydrogenobaculum sp. Y04AAS1]
Length = 73
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+YK+ L F+S+ GKI+P R++ V K QR+LA IKRAR L L+ YV
Sbjct: 22 NYKNYNELREFMSEHGKILPRRMTFVCAKHQRKLANEIKRARQLALLPYV 71
>gi|133854414|gb|ABO39212.1| ribosomal protein S18 [Theobroma cacao]
Length = 82
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|168701389|ref|ZP_02733666.1| 30S ribosomal protein S18 [Gemmata obscuriglobus UQM 2246]
Length = 80
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 27 GAPR---IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G PR +DYKD+ L + ++ +GK+V + S + QRE+ A+KRAR++GL+ YV
Sbjct: 21 GCPRPAFVDYKDVGNLKKMITGQGKLVSRKRSGLCATFQREVGTAVKRARFMGLLPYVG 79
>gi|167391827|ref|YP_001671705.1| ribosomal protein S18 [Carica papaya]
gi|205831420|sp|B1A957|RR18_CARPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|166344154|gb|ABY86804.1| ribosomal protein S18 [Carica papaya]
Length = 101
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|153012191|ref|YP_001381706.1| ribosomal protein S18 [Medicago truncatula]
Length = 106
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ RIDYK++ LL RF+S++GKI+ R++ + K+QR + AIK+AR L L+ +V+
Sbjct: 5 QSGDRIDYKNMSLLYRFISRQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVSF 62
>gi|118614514|ref|YP_899429.1| ribosomal protein S18 [Sorghum bicolor]
gi|125987697|sp|A1E9U6|RR18_SORBI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201148|gb|ABK79518.1| ribosomal protein S18 [Sorghum bicolor]
Length = 163
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 54 RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITVAIKQARILSFLPFRN 106
>gi|110456729|gb|ABG74832.1| ribosomal protein S18 [Jasminum subhumile]
Length = 149
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K +ID+ + LLN+F+SQ+GKI+ +++ ++ K+QR + AIK+AR L L+ +V+
Sbjct: 31 KPGDQIDFTNTSLLNQFISQQGKILSRKVTRLTLKQQRLMTIAIKQARILSLLPFVS 87
>gi|115350013|ref|YP_764407.1| ribosomal protein S18 [Stigeoclonium helveticum]
gi|122165141|sp|Q06SF9|RR18_STIHE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|98990227|gb|ABF60194.1| ribosomal protein S18 [Stigeoclonium helveticum]
Length = 129
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL ++ GKI+P R + ++ K+QR L KAIK AR LGL+ +V
Sbjct: 71 IDYKNRSLLQEYIYFTGKIIPKRKTGITTKQQRYLTKAIKTARILGLLPFV 121
>gi|196009376|ref|XP_002114553.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
gi|190582615|gb|EDV22687.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
Length = 113
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 30 RIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+IDYK++RLL++F+S G I RI+ + KQ+EL KAI+RAR +G + Y
Sbjct: 48 KIDYKNVRLLSQFISNDTGMIYGRRITGLCGHKQKELTKAIRRARTMGFMPYT 100
>gi|11465581|ref|NP_045027.1| ribosomal protein S18 [Cyanidium caldarium]
gi|14285759|sp|Q9TM39|RR18_CYACA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|6466437|gb|AAF13018.1|AF022186_192 unknown [Cyanidium caldarium]
Length = 68
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
K + I+YK L+ F+S RGKI+P RI+ + KK + + KAIK+AR +GL+ +
Sbjct: 9 KDSKAINYKTTDLIREFISDRGKIIPQRITKSTRKKHKLIEKAIKQARLIGLMPF 63
>gi|255926570|gb|ACU40897.1| ribosomal protein S18 [Festuca arundinacea]
Length = 149
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + +
Sbjct: 40 PRIGPGD-RIDYRNMSLINRFISEQGKILSRRINRLNLKQQRLITLAIKQARILSFLPFR 98
Query: 82 N 82
N
Sbjct: 99 N 99
>gi|311897277|dbj|BAJ29685.1| putative ribosomal protein S18 [Kitasatospora setae KM-6054]
Length = 78
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C A +DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CVFCKDKATYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREVALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|260677440|ref|YP_003208208.1| ribosomal protein S18 [Coix lacryma-jobi]
gi|209361378|gb|ACI43293.1| ribosomal protein S18 [Coix lacryma-jobi]
Length = 163
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 54 RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFRN 106
>gi|48478791|ref|YP_024399.1| ribosomal protein S18 [Saccharum hybrid cultivar SP-80-3280]
gi|50812549|ref|YP_054652.1| ribosomal protein S18 [Saccharum officinarum]
gi|62287431|sp|Q6ENU2|RR18_SACOF RecName: Full=30S ribosomal protein S18, chloroplastic
gi|75291220|sp|Q6L379|RR18_SACHY RecName: Full=30S ribosomal protein S18, chloroplastic
gi|48478693|gb|AAT44713.1| ribosomal protein S18 [Saccharum hybrid cultivar SP80-3280]
gi|49659533|dbj|BAD27314.1| ribosomal protein S18 [Saccharum hybrid cultivar NCo 310]
Length = 163
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 54 RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFRN 106
>gi|242310277|ref|ZP_04809432.1| 30S ribosomal protein S18 [Helicobacter pullorum MIT 98-5489]
gi|239523574|gb|EEQ63440.1| 30S ribosomal protein S18 [Helicobacter pullorum MIT 98-5489]
Length = 85
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKDI +L LS+R KI+P R++ S K Q + AIKRAR +
Sbjct: 7 YSKRYCRYTESKIEFIDYKDIDMLKHSLSERYKIMPRRLTGNSKKWQERVEVAIKRARQM 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|91208924|ref|YP_538957.1| ribosomal protein S18 [Gossypium hirsutum]
gi|325210951|ref|YP_004286026.1| ribosomal protein S18 [Gossypium thurberi]
gi|122226163|sp|Q2L928|RR18_GOSHI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|85687438|gb|ABC73650.1| ribosomal protein S18 [Gossypium hirsutum]
gi|290775813|gb|ADD62309.1| ribosomal protein S18 [Gossypium thurberi]
Length = 101
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|328949624|ref|YP_004366959.1| 30S ribosomal protein S18 [Marinithermus hydrothermalis DSM
14884]
gi|328449948|gb|AEB10849.1| 30S ribosomal protein S18 [Marinithermus hydrothermalis DSM
14884]
Length = 84
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DY++ +L RFLS+ GKI+P R + V K QR LA+ IKRAR L ++
Sbjct: 16 KVCQFCTGELEITDYRNREMLMRFLSETGKILPRRRTGVCAKHQRRLAQMIKRARILAIV 75
Query: 79 AYVN 82
+
Sbjct: 76 PFTE 79
>gi|290487264|gb|ADD30016.1| ribosomal protein S18 [Euonymus americanus]
Length = 108
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ K RI Y+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SLRRRLPPI--KSGDRIAYRNMSLISRFISEQGKILSKRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 72 LSLLPFLN 79
>gi|11467213|ref|NP_043046.1| ribosomal protein S18 [Zea mays]
gi|133837|sp|P25459|RR18_MAIZE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|12450|emb|CAA39996.1| chloroplast ribosomal protein S18 [Zea mays]
gi|902243|emb|CAA60307.1| ribosomal protein S18 [Zea mays]
Length = 170
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 61 RIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFRN 113
>gi|109946868|ref|YP_664096.1| 30S ribosomal protein S18 [Helicobacter acinonychis str. Sheeba]
gi|123173576|sp|Q17Z29|RS18_HELAH RecName: Full=30S ribosomal protein S18
gi|109714089|emb|CAJ99097.1| 30S ribosomal protein S18 [Helicobacter acinonychis str. Sheeba]
Length = 85
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRAR++ L
Sbjct: 8 KRYCRYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRARHMAL 67
Query: 78 IAYV 81
I Y+
Sbjct: 68 IPYI 71
>gi|110227101|ref|YP_665580.1| ribosomal protein S18 [Populus alba]
gi|134093222|ref|YP_001109524.1| ribosomal protein S18 [Populus trichocarpa]
gi|122230953|sp|Q14FD5|RR18_POPAL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831410|sp|A4GYT3|RR18_POPTR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|109945539|dbj|BAE97227.1| ribosomal protein S18 [Populus alba]
gi|133712084|gb|ABO36727.1| ribosomal protein S18 [Populus trichocarpa]
Length = 101
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+ P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 16 RRRLPPIGSG-DRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSS 74
Query: 78 IAYVN 82
+ ++N
Sbjct: 75 LPFLN 79
>gi|109074224|ref|XP_001104605.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Macaca
mulatta]
Length = 144
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ LG
Sbjct: 65 KKCILCGK---RVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGF 121
Query: 78 I 78
+
Sbjct: 122 M 122
>gi|148654767|ref|YP_001274972.1| 30S ribosomal protein S18 [Roseiflexus sp. RS-1]
gi|205556483|sp|A5UQW9|RS181_ROSS1 RecName: Full=30S ribosomal protein S18 1
gi|148566877|gb|ABQ89022.1| SSU ribosomal protein S18P [Roseiflexus sp. RS-1]
Length = 88
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD L RFL GKI+P R + +S K QR+L AIKRAR++ L+ +V
Sbjct: 30 DYKDPERLKRFLGPTGKILPRRRTGLSAKMQRKLTIAIKRARHMALLPFVE 80
>gi|158319027|ref|YP_001511535.1| 30S ribosomal protein S18 [Frankia sp. EAN1pec]
gi|288921430|ref|ZP_06415708.1| ribosomal protein S18 [Frankia sp. EUN1f]
gi|229559985|sp|A8L8T2|RS18_FRASN RecName: Full=30S ribosomal protein S18
gi|158114432|gb|ABW16629.1| ribosomal protein S18 [Frankia sp. EAN1pec]
gi|288347164|gb|EFC81463.1| ribosomal protein S18 [Frankia sp. EUN1f]
Length = 78
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R +
Sbjct: 10 KKKVCVFCKDKVHYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDVATAVKNSREMA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|240047576|ref|YP_002960964.1| 30S ribosomal protein S18 [Mycoplasma conjunctivae HRC/581]
gi|239985148|emb|CAT05158.1| 30S ribosomal protein S18 [Mycoplasma conjunctivae]
Length = 87
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ LL + ++ GKI PSR+S K QR+LA+A+KRAR + L+ ++
Sbjct: 24 IDYKNTELLKKSINVFGKIQPSRVSGSCAKHQRKLAQAVKRARMIALLPFIG 75
>gi|323703280|ref|ZP_08114931.1| ribosomal protein S18 [Desulfotomaculum nigrificans DSM 574]
gi|323531745|gb|EGB21633.1| ribosomal protein S18 [Desulfotomaculum nigrificans DSM 574]
Length = 76
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD+ L +++++RGKI+P RIS QR L AIKRAR + L+ +
Sbjct: 14 CSFCVDKMTSIDYKDVPRLKKYITERGKILPRRISGNCAHHQRMLTTAIKRARNICLLPF 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|224418786|ref|ZP_03656792.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|253826691|ref|ZP_04869576.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|313142303|ref|ZP_07804496.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|253510097|gb|EES88756.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|313131334|gb|EFR48951.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
Length = 85
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKDI +L LS+R KI+P R++ S K Q + AIKRAR +
Sbjct: 7 YSKRYCRYTESKIEFIDYKDIDMLKHSLSERYKIMPRRLTGNSKKWQERVEVAIKRARQM 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|290487254|gb|ADD30011.1| ribosomal protein S18 [Rhododendron simsii]
Length = 112
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ P+ + RIDY+++ L++RF+SQ+GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 15 FRRRLPPI--QSGDRIDYRNMTLISRFISQQGKILSRRVNRLTLKQQRLITIAIKQARIL 72
Query: 76 GLIAYVN 82
+ ++N
Sbjct: 73 SSLPFLN 79
>gi|224107573|ref|XP_002333495.1| predicted protein [Populus trichocarpa]
gi|222837064|gb|EEE75443.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
R+ P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L
Sbjct: 16 RRRLPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSS 74
Query: 78 IAYVN 82
+ ++N
Sbjct: 75 LPFLN 79
>gi|302822972|ref|XP_002993141.1| hypothetical protein SELMODRAFT_431295 [Selaginella moellendorffii]
gi|300139032|gb|EFJ05781.1| hypothetical protein SELMODRAFT_431295 [Selaginella moellendorffii]
Length = 341
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+A PT + +R +K+ L+ D+++I+ L+ FLS+ +I+P + +S+S K
Sbjct: 220 IASSDPTEMPQRQKKVMKKNEVLAAA-----DFRNIKFLSLFLSETSRILPRKTTSISLK 274
Query: 61 KQRELAKAIKRARYLGLIAYVNL 83
QR +A+ IK AR LGL+ Y ++
Sbjct: 275 SQRRIAREIKTARSLGLLPYSSM 297
>gi|309322385|ref|YP_003934465.1| ribosomal protein S18 [Cathaya argyrophylla]
gi|307683311|dbj|BAJ19618.1| ribosomal protein S18 [Cathaya argyrophylla]
Length = 86
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
R+DYK++ ++RF+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 31 RLDYKNMSPISRFISEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 82
>gi|289641251|ref|ZP_06473418.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
gi|289509013|gb|EFD29945.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
Length = 78
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R +
Sbjct: 10 KKKVCVFCKDKTDYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDIAIAVKNSREMA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|237753481|ref|ZP_04583961.1| 30S ribosomal protein S18 [Helicobacter winghamensis ATCC
BAA-430]
gi|229375748|gb|EEO25839.1| 30S ribosomal protein S18 [Helicobacter winghamensis ATCC
BAA-430]
Length = 85
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRAR +
Sbjct: 7 YSKRYCRYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNSKKWQERVEVAIKRARQM 66
Query: 76 GLIAYV 81
LI Y+
Sbjct: 67 ALIPYI 72
>gi|116617130|ref|YP_817504.1| ribosomal protein S18 [Coffea arabica]
gi|122153642|sp|A0A357|RR18_COFAR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116242186|gb|ABJ89701.1| ribosomal protein S18 [Coffea arabica]
Length = 101
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 41/52 (78%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 28 IDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITVAIKQARILSLLPFLN 79
>gi|324998552|ref|ZP_08119664.1| 30S ribosomal protein S18 [Pseudonocardia sp. P1]
Length = 78
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C A IDYKD LL +F+S RGKI R++ + QR++A A+K +R +
Sbjct: 10 KKKVCAFCKDKAQPIDYKDTGLLRKFISDRGKIRARRVTGNCRQHQRDVAVAVKNSREVA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|242624337|ref|YP_003002255.1| 30S ribosomal protein S18 [Aureoumbra lagunensis]
gi|239997445|gb|ACS36967.1| 30S ribosomal protein S18 [Aureoumbra lagunensis]
Length = 67
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
D+ +I LL +L + +I+P R++ +S K QR+L KA+KRAR LGL+ +V
Sbjct: 12 FDFTNISLLVEYLDDQKRILPRRVTELSIKNQRKLTKAVKRARILGLLPFV 62
>gi|325126887|ref|YP_004286124.1| ribosomal protein S18 [Fragaria vesca subsp. vesca]
gi|324022799|gb|ADY15373.1| ribosomal protein S18 [Fragaria vesca subsp. vesca]
Length = 101
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILSPLPFLN 79
>gi|295311750|ref|YP_003587487.1| ribosomal protein S18 [Oncidium Gower Ramsey]
gi|254833127|gb|ACT83130.1| ribosomal protein S18 [Oncidium Gower Ramsey]
Length = 101
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RFLS++GKI+ R + ++ K+QR + AIK+AR L L+ +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISRFLSEQGKILSRRTNRLTLKQQRLITIAIKQARILSLLPF 77
Query: 81 VN 82
N
Sbjct: 78 RN 79
>gi|256370867|ref|YP_003108691.1| ribosomal protein S18 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007451|gb|ACU53018.1| ribosomal protein S18 [Acidimicrobium ferrooxidans DSM 10331]
Length = 135
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + +DYKD+ LL RF S+R KI R++ + Q ++A AIK AR L
Sbjct: 22 KKKPCVFCQQHVDWVDYKDVDLLRRFTSERAKIRARRVTGNCAQHQADVANAIKVARELA 81
Query: 77 LIAYV 81
L+ YV
Sbjct: 82 LLPYV 86
>gi|46579370|ref|YP_010178.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603072|ref|YP_967472.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris DP4]
gi|59798765|sp|Q72DH2|RS18_DESVH RecName: Full=30S ribosomal protein S18
gi|166220950|sp|A1VF29|RS18_DESVV RecName: Full=30S ribosomal protein S18
gi|46448784|gb|AAS95437.1| ribosomal protein S18 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563301|gb|ABM29045.1| SSU ribosomal protein S18P [Desulfovibrio vulgaris DP4]
gi|311233195|gb|ADP86049.1| ribosomal protein S18 [Desulfovibrio vulgaris RCH1]
Length = 87
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C IDYK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKELPIDYKRADILRDFITERGKIIARRITGTCAHHQRVLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|290487278|gb|ADD30023.1| ribosomal protein S18 [Quercus nigra]
Length = 102
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI-GSG-DRIDYRNMSLISRFISEQGKILSRRVNRLNLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L L+ +++
Sbjct: 72 LSLLPFLS 79
>gi|254818912|ref|ZP_05223913.1| 30S ribosomal protein S18 [Mycobacterium intracellulare ATCC
13950]
Length = 87
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 10 LRRNVSHRRKSCP---------LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ R V+ RR + P L G +DYKD L F+S+RGKI +++ +S +
Sbjct: 1 MARKVARRRATAPAGRSPKRNLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQ 60
Query: 61 KQRELAKAIKRARYLGLIAY 80
+QR++A AIK AR + L+ Y
Sbjct: 61 QQRQVAAAIKNAREMALLPY 80
>gi|296196117|ref|XP_002745690.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Callithrix jacchus]
Length = 144
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ LG
Sbjct: 65 KKCILCGK---RVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGF 121
Query: 78 I 78
+
Sbjct: 122 M 122
>gi|304318114|ref|YP_003853259.1| ribosomal protein S18 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779616|gb|ADL70175.1| ribosomal protein S18 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 88
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ L +++++RGKI+P RI+ QR+L AIKRAR + L+ Y
Sbjct: 26 CAFCADKIDYIDYKEVGKLRKYITERGKILPRRITGNCAIHQRQLTVAIKRARQIALLPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|269129130|ref|YP_003302500.1| 30S ribosomal protein S18 [Thermomonospora curvata DSM 43183]
gi|268314088|gb|ACZ00463.1| ribosomal protein S18 [Thermomonospora curvata DSM 43183]
Length = 78
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +DYKD LL +F+S RGKI R++ + QR++A AIK AR + L+ Y
Sbjct: 14 CVFCQEKISYVDYKDTGLLRKFISDRGKIRARRVTGNCTQHQRDVATAIKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|193216922|ref|YP_002000164.1| ribosomal protein S18 [Mycoplasma arthritidis 158L3-1]
gi|226735122|sp|B3PN58|RS18_MYCA5 RecName: Full=30S ribosomal protein S18
gi|193002245|gb|ACF07460.1| ribosomal protein S18 [Mycoplasma arthritidis 158L3-1]
Length = 130
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 9 LLRRNVSHRRKSCP--LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++R+ RR+ C L + IDYK+ L R ++ +GKI+ SRI+ + QR +A
Sbjct: 4 VIRKKPFVRRRPCQFCLKRQAVTYIDYKNEAELVRLVNMQGKILSSRITGTCARHQRAVA 63
Query: 67 KAIKRARYLGLIAYVNL 83
AIKRARY+ ++ Y+ L
Sbjct: 64 LAIKRARYMAILPYIGL 80
>gi|312200937|ref|YP_004020998.1| ribosomal protein S18 [Frankia sp. EuI1c]
gi|311232273|gb|ADP85128.1| ribosomal protein S18 [Frankia sp. EuI1c]
Length = 78
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R +
Sbjct: 10 KKKVCVFCKDKTEYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDVAIAVKNSREMA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|126331100|ref|XP_001371066.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 171
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 94 KKCILCGK---RVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 150
Query: 78 I 78
+
Sbjct: 151 M 151
>gi|114593894|ref|XP_001135728.1| PREDICTED: mitochondrial ribosomal protein S18C isoform 1 [Pan
troglodytes]
Length = 125
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 63 KKCILCGK---HVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGK 119
Query: 78 IAYVN 82
Y+N
Sbjct: 120 KEYLN 124
>gi|15639055|ref|NP_218501.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025295|ref|YP_001933067.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
SS14]
gi|6094164|sp|O83100|RS18_TREPA RecName: Full=30S ribosomal protein S18
gi|229560078|sp|B2S209|RS18_TREPS RecName: Full=30S ribosomal protein S18
gi|3322319|gb|AAC65056.1| ribosomal protein S18 (rpsR) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017870|gb|ACD70488.1| ribosomal protein S18 [Treponema pallidum subsp. pallidum SS14]
gi|291059477|gb|ADD72212.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 99
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYKD L RF+++RGKI+P RI+ K QR +A +KR+R + L+ +V
Sbjct: 47 DYKDPDTLRRFITERGKILPRRITGTCAKHQRRVALEVKRSRAVALLPFV 96
>gi|297561295|ref|YP_003680269.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845743|gb|ADH67763.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 85
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKD LL +F+S++GKI R++ V+ ++QR +A A+K AR + L+ Y
Sbjct: 27 IDYKDTALLRKFISEKGKIRSRRVTRVTARQQRLIAAAVKNAREMALLPY 76
>gi|253795692|ref|YP_003038788.1| putative 30S ribosomal subunit protein S18 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253740000|gb|ACT34335.1| putative 30S ribosomal subunit protein S18 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 169
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ +HRR+ + +D+K++ LL+ L++RG I P + + +KQ++LA+ IKR
Sbjct: 90 DYAHRRERERANAADVGALDFKNVALLHSLLTERGGIPPRSATGFTRRKQKKLAREIKRC 149
Query: 73 RYLGLIAYVNL 83
R+LGL+A +L
Sbjct: 150 RHLGLLAGRDL 160
>gi|134103769|ref|YP_001109430.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|291007704|ref|ZP_06565677.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|205556690|sp|A4FR30|RS182_SACEN RecName: Full=30S ribosomal protein S18 2
gi|133916392|emb|CAM06505.1| 30S ribosomal subunit protein S18 [Saccharopolyspora erythraea
NRRL 2338]
Length = 79
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 17 RRKSCPLS-GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C K A IDYKD LL +++S RGKI R++ + QR++A A+K AR +
Sbjct: 10 KKKVCVFCKDKAAQSIDYKDTTLLRKYISDRGKIRARRVTGNCSQHQRDVAIAVKNAREM 69
Query: 76 GLIAYVN 82
L+ Y +
Sbjct: 70 ALLPYTS 76
>gi|326383849|ref|ZP_08205533.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
gi|326197308|gb|EGD54498.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
Length = 74
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C IDYKD LL RFLS RGKI R++ + QR++A A+K +R + L+
Sbjct: 8 KACTFCKDKKTVIDYKDTALLRRFLSDRGKIRSRRVTGNCVQHQRDVAVAVKNSREVALL 67
Query: 79 AYVN 82
+ +
Sbjct: 68 PFTS 71
>gi|302531300|ref|ZP_07283642.1| ribosomal protein S18 [Streptomyces sp. AA4]
gi|302440195|gb|EFL12011.1| ribosomal protein S18 [Streptomyces sp. AA4]
Length = 82
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C KG P IDYKD LL +++S RGKI R++ + QR++A A+K +R + L+
Sbjct: 17 CKAEKKGRPETIDYKDTNLLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREMALLP 76
Query: 80 YVN 82
Y +
Sbjct: 77 YTS 79
>gi|308811174|ref|XP_003082895.1| Ribosomal protein S18 (ISS) [Ostreococcus tauri]
gi|116054773|emb|CAL56850.1| Ribosomal protein S18 (ISS) [Ostreococcus tauri]
Length = 135
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
R ++D R L +F+S GKI P R VS K QR++++AIK AR +G++ Y +
Sbjct: 71 RTSFEDARFLTQFVSDTGKIYPKRRLGVSAKAQRKISRAIKTARQMGILPYTS 123
>gi|120406438|ref|YP_956267.1| 30S ribosomal protein S18 [Mycobacterium vanbaalenii PYR-1]
gi|205556439|sp|A1TGG1|RS181_MYCVP RecName: Full=30S ribosomal protein S18 1
gi|119959256|gb|ABM16261.1| SSU ribosomal protein S18P [Mycobacterium vanbaalenii PYR-1]
Length = 83
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 14 VSHRRKSCP-------LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
+ RR++ P L G R+DYKD L +F+S+RGKI ++ ++ ++QR++
Sbjct: 2 TARRREAAPAKKRRNLLKSLGIERVDYKDTSTLRQFISERGKIRSRSVTGLTVQQQRQVT 61
Query: 67 KAIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 62 TAVKTAREMALLPY 75
>gi|161546631|ref|NP_860069.2| 30S ribosomal protein S18 [Helicobacter hepaticus ATCC 51449]
gi|205562249|sp|Q7VIR6|RS18_HELHP RecName: Full=30S ribosomal protein S18
Length = 84
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ +L LS+R KI+P R++ + + Q + AIKRAR++
Sbjct: 6 YSKRYCRYTEAKLEYIDYKDVEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRARHM 65
Query: 76 GLIAYV 81
LI Y+
Sbjct: 66 ALIPYI 71
>gi|69216267|gb|AAZ03914.1| ribosomal protein S18 [Ginkgo biloba]
Length = 83
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR P+ + +ID+K++ L++RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 11 SFRRHLPPI--RSGDQIDHKNMSLISRFVSEQGKILSRRVNRLTSKQQRLMTIAIKRARI 68
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 69 LSSLPFLN 76
>gi|169335534|ref|ZP_02862727.1| hypothetical protein ANASTE_01948 [Anaerofustis stercorihominis
DSM 17244]
gi|169258272|gb|EDS72238.1| hypothetical protein ANASTE_01948 [Anaerofustis stercorihominis
DSM 17244]
Length = 81
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD +LL +++S+R KI+P R++ K QR + +A+ AR
Sbjct: 15 RKKVCYFCENKIEHIDYKDTKLLKKYVSERYKILPRRVTGTCAKHQRGVTQAVNIARNAA 74
Query: 77 LIAYVN 82
L+ Y
Sbjct: 75 LLPYTT 80
>gi|224438133|ref|ZP_03659068.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
gi|313144573|ref|ZP_07806766.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
gi|313129604|gb|EFR47221.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
Length = 84
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ ++ C + IDYKD+ +L LS+R KI+P R++ + + Q + AIKRAR++
Sbjct: 6 YSKRYCRYTETKLEFIDYKDVEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRARHM 65
Query: 76 GLIAYV 81
LI Y+
Sbjct: 66 ALIPYI 71
>gi|139387474|ref|YP_001122828.1| ribosomal protein S18 [Phaseolus vulgaris]
gi|205831409|sp|A4GGC7|RR18_PHAVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112030996|gb|ABH88108.1| ribosomal protein S18 [Phaseolus vulgaris]
gi|158187128|gb|ABW22761.1| ribosomal protein S18 [Phaseolus vulgaris]
Length = 102
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDYK++ L+ RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYKNMGLICRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|300791097|ref|YP_003771388.1| 30S ribosomal protein S18 [Amycolatopsis mediterranei U32]
gi|299800611|gb|ADJ50986.1| small subunit ribosomal protein S18 [Amycolatopsis mediterranei
U32]
Length = 82
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C KG P IDYKD LL +++S RGKI R++ + QR++A A+K +R + L+
Sbjct: 17 CKAEKKGRPELIDYKDTNLLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREMALLP 76
Query: 80 YVN 82
Y +
Sbjct: 77 YTS 79
>gi|57109098|ref|XP_535635.1| PREDICTED: similar to 28S ribosomal protein S18c, mitochondrial
precursor (MRP-S18-c) (Mrps18c) (MRP-S18-1) isoform 1
[Canis familiaris]
Length = 143
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 64 KKCILCGK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|242279494|ref|YP_002991623.1| 30S ribosomal protein S18 [Desulfovibrio salexigens DSM 2638]
gi|259494806|sp|C6BVA9|RS18_DESAD RecName: Full=30S ribosomal protein S18
gi|242122388|gb|ACS80084.1| ribosomal protein S18 [Desulfovibrio salexigens DSM 2638]
Length = 86
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R + +RK C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FKRKFTPKRKFCRFCADKNLPLDYKRPDILKDFVTERGKIIARRITGTCAKHQRRLTTEI 62
Query: 70 KRARYLGLIAYVNL 83
KR+R + L+ Y +
Sbjct: 63 KRSRQMALMHYTTV 76
>gi|110456660|gb|ABG74779.1| ribosomal protein S18 [Jasminum leratii]
Length = 143
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
K I + + LLNRF+SQRGKI+ +++ ++ K+QR + AIK+AR L L+ +V
Sbjct: 32 KSGDEIFFINTSLLNRFISQRGKILSRKVTRLTLKQQRLMTSAIKQARILSLLPFV 87
>gi|254384805|ref|ZP_05000142.1| 30S ribosomal protein S18 [Streptomyces sp. Mg1]
gi|297193324|ref|ZP_06910722.1| 30S ribosomal protein S18 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|302535601|ref|ZP_07287943.1| ribosomal protein S18 [Streptomyces sp. C]
gi|194343687|gb|EDX24653.1| 30S ribosomal protein S18 [Streptomyces sp. Mg1]
gi|197718358|gb|EDY62266.1| 30S ribosomal protein S18 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|302444496|gb|EFL16312.1| ribosomal protein S18 [Streptomyces sp. C]
gi|328883731|emb|CCA56970.1| SSU ribosomal protein S18p [Streptomyces venezuelae ATCC 10712]
Length = 78
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTAYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|54027548|ref|YP_121790.1| 30S ribosomal protein S18 [Nocardia farcinica IFM 10152]
gi|59798928|sp|Q5YN15|RS181_NOCFA RecName: Full=30S ribosomal protein S18 1
gi|54019056|dbj|BAD60426.1| putative ribosomal protein S18 [Nocardia farcinica IFM 10152]
Length = 83
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C S G IDYKD LL +++S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 19 CKESKSGNVSIDYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDIAVAVKNSREVALLPY 78
Query: 81 VN 82
V+
Sbjct: 79 VS 80
>gi|258517417|ref|YP_003193639.1| 30S ribosomal protein S18 [Desulfotomaculum acetoxidans DSM 771]
gi|257781122|gb|ACV65016.1| ribosomal protein S18 [Desulfotomaculum acetoxidans DSM 771]
Length = 76
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK+I L +++++RGKI+P RIS K QR L +IKRAR + L+ +
Sbjct: 14 CSFCVDKVQSIDYKEIPRLKKYITERGKILPRRISGNCAKHQRMLTVSIKRARNMALLPF 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|262201428|ref|YP_003272636.1| 30S ribosomal protein S18 [Gordonia bronchialis DSM 43247]
gi|262084775|gb|ACY20743.1| ribosomal protein S18 [Gordonia bronchialis DSM 43247]
Length = 84
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+DYKDI LL FLS RGKI ++ ++ ++QR++A AI+ AR + L+ Y
Sbjct: 32 VDYKDIALLRTFLSDRGKIRSRSVTGLTPQQQRQVATAIRNAREMALLPY 81
>gi|108796929|ref|YP_636229.1| ribosomal protein S18 [Pseudendoclonium akinetum]
gi|122227092|sp|Q3ZJ38|RR18_PSEAK RecName: Full=30S ribosomal protein S18, chloroplastic
gi|56159627|gb|AAV80651.1| ribosomal protein S18 [Pseudendoclonium akinetum]
Length = 85
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK++ LL +++S GKI+ R++ ++ K+QR ++ AIK AR GL+ ++N
Sbjct: 33 VDYKNVALLRKYISAEGKILSRRLTRLTSKQQRHISTAIKTARIAGLLPFIN 84
>gi|226309316|ref|YP_002769276.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229489899|ref|ZP_04383754.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
gi|226188433|dbj|BAH36537.1| probable 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229323195|gb|EEN88961.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
Length = 80
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +I+YKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKV-MKKKVCTFCKEKNTQINYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDV 60
Query: 66 AKAIKRARYLGLIAYVNL 83
A A+K +R + L+ Y +
Sbjct: 61 AIAVKNSREVALLPYATV 78
>gi|182437465|ref|YP_001825184.1| 30S ribosomal protein S18 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|239942699|ref|ZP_04694636.1| 30S ribosomal protein S18 [Streptomyces roseosporus NRRL 15998]
gi|239989158|ref|ZP_04709822.1| 30S ribosomal protein S18 [Streptomyces roseosporus NRRL 11379]
gi|282863347|ref|ZP_06272406.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|291446163|ref|ZP_06585553.1| 30S ribosomal protein S18 1 [Streptomyces roseosporus NRRL 15998]
gi|326778120|ref|ZP_08237385.1| 30S ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
gi|205556703|sp|B1VPC2|RS182_STRGG RecName: Full=30S ribosomal protein S18 2
gi|178465981|dbj|BAG20501.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|282561682|gb|EFB67225.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|291349110|gb|EFE76014.1| 30S ribosomal protein S18 1 [Streptomyces roseosporus NRRL 15998]
gi|320009722|gb|ADW04572.1| ribosomal protein S18 [Streptomyces flavogriseus ATCC 33331]
gi|326658453|gb|EGE43299.1| 30S ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
Length = 78
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTQYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|115443553|ref|YP_778572.1| 50S ribosomal protein S18 [Bigelowiella natans]
gi|122227450|sp|Q06J55|RR18_BIGNA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110810198|gb|ABG91404.1| 50S ribosomal protein S18 [Bigelowiella natans]
Length = 64
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK+ LL +F+S GKI+P I+ + K QR+L+KAIK +R GL+ ++N
Sbjct: 12 LDYKNTNLLKKFVSVDGKILPKYITVLKPKNQRKLSKAIKLSRIAGLLKFLN 63
>gi|323705824|ref|ZP_08117396.1| ribosomal protein S18 [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534820|gb|EGB24599.1| ribosomal protein S18 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 88
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ L +++++RGKI+P RI+ QR+L AIKRAR + L+ Y
Sbjct: 26 CAFCADRIDYIDYKEVGKLRKYITERGKILPRRITGNCAIHQRQLTVAIKRARQIALLPY 85
Query: 81 V 81
Sbjct: 86 T 86
>gi|115531924|ref|YP_784080.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|115532020|ref|YP_784176.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|122164222|sp|Q06FK5|RR18_PELHO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112382078|gb|ABI17271.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|112382174|gb|ABI17367.1| ribosomal protein S18 [Pelargonium x hortorum]
Length = 141
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDY++I L+ RF+SQ+GKI+ R++ V+ K+QR L AIK+AR L + +
Sbjct: 58 IDYRNISLIGRFISQQGKILSRRVNRVTLKQQRRLTIAIKQARILSSLPF 107
>gi|290487280|gb|ADD30024.1| ribosomal protein S18 [Staphylea colchica]
Length = 101
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILSSLPFLN 79
>gi|21222315|ref|NP_628094.1| 30S ribosomal protein S18 [Streptomyces coelicolor A3(2)]
gi|29830830|ref|NP_825464.1| 30S ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|239930204|ref|ZP_04687157.1| 30S ribosomal protein S18 [Streptomyces ghanaensis ATCC 14672]
gi|239980816|ref|ZP_04703340.1| 30S ribosomal protein S18 [Streptomyces albus J1074]
gi|256786585|ref|ZP_05525016.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|289770476|ref|ZP_06529854.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|290959032|ref|YP_003490214.1| 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|291438548|ref|ZP_06577938.1| 30S ribosomal protein S18 1 [Streptomyces ghanaensis ATCC 14672]
gi|291452676|ref|ZP_06592066.1| 30S ribosomal protein S18 1 [Streptomyces albus J1074]
gi|294630308|ref|ZP_06708868.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|297200910|ref|ZP_06918307.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|302552665|ref|ZP_07305007.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|329938668|ref|ZP_08288064.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
gi|54038990|sp|P66471|RS181_STRAW RecName: Full=30S ribosomal protein S18 1
gi|54041926|sp|P66470|RS181_STRCO RecName: Full=30S ribosomal protein S18 1
gi|4808404|emb|CAB42736.1| putative 30S ribosomal protein S18 [Streptomyces coelicolor
A3(2)]
gi|29607943|dbj|BAC71999.1| putative ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|197716408|gb|EDY60442.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|260648558|emb|CBG71669.1| putative 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|289700675|gb|EFD68104.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|291341443|gb|EFE68399.1| 30S ribosomal protein S18 1 [Streptomyces ghanaensis ATCC 14672]
gi|291355625|gb|EFE82527.1| 30S ribosomal protein S18 1 [Streptomyces albus J1074]
gi|292833641|gb|EFF91990.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|302470283|gb|EFL33376.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|329302159|gb|EGG46051.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
Length = 78
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKVTYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|326909415|ref|YP_004327684.1| ribosomal protein S18 [Hevea brasiliensis]
gi|308523529|gb|ADO33579.1| ribosomal protein S18 [Hevea brasiliensis]
Length = 94
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ +S K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLSLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILSSLPFLN 79
>gi|156402582|ref|XP_001639669.1| predicted protein [Nematostella vectensis]
gi|156226799|gb|EDO47606.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
IDYK++RLL++F+S G+I R++ + KKQ+E+ AIKRAR +GL+
Sbjct: 94 IDYKNVRLLSQFISSHSGRIYNRRVTGLCDKKQKEITNAIKRARAIGLM 142
>gi|115605044|ref|YP_784495.1| ribosomal protein S18 [Piper cenocladum]
gi|122164340|sp|Q06GN8|RR18_PIPCE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112253773|gb|ABI14494.1| ribosomal protein S18 [Piper cenocladum]
Length = 102
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++
Sbjct: 21 PPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFL 79
Query: 82 N 82
N
Sbjct: 80 N 80
>gi|256389565|ref|YP_003111129.1| 30S ribosomal protein S18 [Catenulispora acidiphila DSM 44928]
gi|256355791|gb|ACU69288.1| ribosomal protein S18 [Catenulispora acidiphila DSM 44928]
Length = 78
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C +DYKD LL +F+S RGKI R++ + QR++A A+K +R +
Sbjct: 10 KKKVCGFCKDKVAYVDYKDTTLLRKFISDRGKIRARRVTGNCTQHQRDVAVAVKNSREMA 69
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 70 LLPYTS 75
>gi|262204542|ref|YP_003275750.1| 30S ribosomal protein S18 [Gordonia bronchialis DSM 43247]
gi|262087889|gb|ACY23857.1| ribosomal protein S18 [Gordonia bronchialis DSM 43247]
Length = 85
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C IDYKD LL RFLS RGKI R++ + QR++A A+K +R + L+
Sbjct: 19 KACSFCKDKKAVIDYKDTALLRRFLSDRGKIRSRRVTGNCVQHQRDVAVAVKNSREVALL 78
Query: 79 AYVN 82
+ +
Sbjct: 79 PFTS 82
>gi|295065749|ref|YP_003587689.1| ribosomal protein S18 [Anomochloa marantoidea]
gi|251765273|gb|ACT15427.1| ribosomal protein S18 [Anomochloa marantoidea]
Length = 156
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+N+F+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 54 RIDYRNMSLINQFISEQGKILSRRINRLTLKQQRLITIAIKQARILSFLPFRN 106
>gi|47459060|ref|YP_015922.1| 30S ribosomal protein S18 [Mycoplasma mobile 163K]
gi|59798718|sp|Q6KI65|RS18_MYCMO RecName: Full=30S ribosomal protein S18
gi|47458389|gb|AAT27711.1| 30S ribosomal protein s18 [Mycoplasma mobile 163K]
Length = 84
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + IDYKD+ L++++++ GKI+ S+I+ K QR ++ IKRAR + LI
Sbjct: 16 KPCFFHVEKIKYIDYKDVELVSKYINNHGKILSSKITGNCAKHQRLISNVIKRARIMALI 75
Query: 79 AYVN 82
+++
Sbjct: 76 PFIS 79
>gi|156743828|ref|YP_001433957.1| 30S ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
gi|205556668|sp|A7NQU3|RS182_ROSCS RecName: Full=30S ribosomal protein S18 2
gi|156235156|gb|ABU59939.1| ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
Length = 88
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD L RFL GKI+P R + ++ K QR L AIKRAR++ L+ +V
Sbjct: 30 DYKDPERLRRFLGPTGKILPRRRTGLTAKMQRRLTIAIKRARHMALLPFVE 80
>gi|167957110|ref|ZP_02544184.1| 30S ribosomal protein S18 [candidate division TM7 single-cell
isolate TM7c]
gi|169838318|ref|ZP_02871506.1| ribosomal protein S18 [candidate division TM7 single-cell isolate
TM7a]
Length = 66
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYKD + L RF+ GKI P + +S K+QR+LA AIKRAR+L L+ +V+
Sbjct: 13 FDYKDAKTLLRFVDAYGKIEPIGRTGLSVKQQRQLAVAIKRARHLALLPFVS 64
>gi|115604956|ref|YP_784408.1| ribosomal protein S18 [Drimys granadensis]
gi|122164419|sp|Q06GX5|RR18_DRIGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112032684|gb|ABH88319.1| ribosomal protein S18 [Drimys granadensis]
Length = 101
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|145221901|ref|YP_001132579.1| ribosomal protein S18 [Mycobacterium gilvum PYR-GCK]
gi|145214387|gb|ABP43791.1| SSU ribosomal protein S18P [Mycobacterium gilvum PYR-GCK]
Length = 63
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
G R+DYKD L +FLS+RGKI ++ ++ ++QR++ A+K AR + L+ Y
Sbjct: 6 GIERVDYKDTSTLRQFLSERGKIRSRTVTGLTVQQQRQVTIAVKNAREMALLPY 59
>gi|290487274|gb|ADD30021.1| ribosomal protein S18 [Oxalis latifolia]
Length = 101
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ +QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLNQQRLITVAIKQARI 71
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 72 LSSLPFLN 79
>gi|149390464|ref|YP_001294292.1| ribosomal protein S18 [Illicium oligandrum]
gi|205831394|sp|A6MMW6|RR18_ILLOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|147917417|gb|ABQ52541.1| ribosomal protein S18 [Illicium oligandrum]
Length = 108
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSG-DRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|146423640|ref|XP_001487746.1| hypothetical protein PGUG_01123 [Meyerozyma guilliermondii ATCC
6260]
gi|146388867|gb|EDK37025.1| hypothetical protein PGUG_01123 [Meyerozyma guilliermondii ATCC
6260]
Length = 195
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 22 PLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G +D Y LL+RFLS G+I+P I+ ++K QR+L+ AIKRAR GL++
Sbjct: 123 PFENAGIDPLDVYMMPELLSRFLSSTGQILPREITGCNNKNQRKLSMAIKRARACGLLSS 182
Query: 81 VN 82
V+
Sbjct: 183 VH 184
>gi|153805596|ref|YP_001382177.1| ribosomal protein S18 [Leptosira terrestris]
gi|205831397|sp|A6YGA0|RR18_LEPTE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134270127|gb|ABO69316.1| ribosomal protein S18 [Leptosira terrestris]
Length = 100
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL ++ GKI P R + ++ K+QR ++KAIK AR +GL+ +V
Sbjct: 46 IDYKNVILLRNGITAEGKIFPRRFTKLNAKQQRYMSKAIKNARMVGLLPFV 96
>gi|75755680|ref|YP_319786.1| ribosomal protein S18 [Acorus calamus]
gi|161622331|ref|YP_001586203.1| ribosomal protein S18 [Acorus americanus]
gi|122227061|sp|Q3V513|RR18_ACOCL RecName: Full=Chloroplast 30S ribosomal protein S18
gi|69216265|gb|AAZ03913.1| ribosomal protein S18 [Acorus americanus]
gi|74381730|emb|CAI53815.1| ribosomal protein S18 [Acorus calamus]
gi|160369874|gb|ABX38765.1| ribosomal protein S18 [Acorus americanus]
Length = 101
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|159161182|ref|YP_001542469.1| ribosomal protein S18 [Ceratophyllum demersum]
gi|205831421|sp|A8SEC5|RR18_CERDE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148508465|gb|ABQ81472.1| ribosomal protein S18 [Ceratophyllum demersum]
gi|227481141|emb|CAP62520.1| ribosomal protein S18 [Ceratophyllum demersum]
Length = 101
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|74001790|ref|XP_859432.1| PREDICTED: similar to 28S ribosomal protein S18c, mitochondrial
precursor (MRP-S18-c) (Mrps18c) (MRP-S18-1) isoform 2
[Canis familiaris]
Length = 89
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 10 KKCILCGK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 66
Query: 78 I 78
+
Sbjct: 67 M 67
>gi|197131556|gb|ACH47296.1| ribosomal protein S18 [Pelargonium cotyledonis]
Length = 135
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
PL + S RR+ P+ + IDY++I L+ RF+SQ+GKI+ R++ ++ K+QR L
Sbjct: 35 PLSKNKRSVRRRPSPI--QPGDLIDYRNISLIGRFISQQGKILSRRVNRLTLKQQRRLTL 92
Query: 68 AIKRARYLGLIAY 80
AIK+AR L + +
Sbjct: 93 AIKQARILSSLPF 105
>gi|240168786|ref|ZP_04747445.1| 30S ribosomal protein S18 [Mycobacterium kansasii ATCC 12478]
Length = 84
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K +IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKKDQKIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIATAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|169631970|ref|YP_001705619.1| 30S ribosomal protein S18 [Mycobacterium abscessus ATCC 19977]
gi|169243937|emb|CAM64965.1| 30S ribosomal protein S18 [Mycobacterium abscessus]
Length = 84
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K A IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCAFCTKKALNIDYKDTNLLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVALL 77
Query: 79 AY 80
+
Sbjct: 78 PF 79
>gi|11466961|ref|NP_054382.1| ribosomal protein S18 [Epifagus virginiana]
gi|266967|sp|P30061|RR18_EPIVI RecName: Full=Plastid 30S ribosomal protein S18
gi|336930|gb|AAA65856.1| ribosomal protein S18 [Epifagus virginiana]
Length = 92
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ G G I Y+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 7 SFRRRLSPI-GSGNL-IYYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 64
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 65 LSLLPFIN 72
>gi|256381019|ref|YP_003104679.1| 30S ribosomal protein S18 [Actinosynnema mirum DSM 43827]
gi|255925322|gb|ACU40833.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
Length = 79
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K A IDYKD LL +++S RGKI R++ + QR++A A+K AR + L+ Y +
Sbjct: 20 KNANLIDYKDTTLLRKYISDRGKIRARRVTGNCSQHQRDVAVAVKNAREMALLPYTS 76
>gi|290487252|gb|ADD30010.1| ribosomal protein S18 [Phoradendron serotinum]
Length = 93
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ RIDY+++ L++RF+S++GKI R++ ++ K+QR + AIK+AR L L+ ++
Sbjct: 23 QSGDRIDYRNMSLISRFISEQGKIFSRRVNRLTLKQQRFITIAIKQARILSLLPFL 78
>gi|302543993|ref|ZP_07296335.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|307329989|ref|ZP_07609141.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|302461611|gb|EFL24704.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
gi|306884365|gb|EFN15399.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 78
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CVFCKEKISYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|254391458|ref|ZP_05006660.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|294813711|ref|ZP_06772354.1| 30S ribosomal protein S18 2 [Streptomyces clavuligerus ATCC
27064]
gi|326442133|ref|ZP_08216867.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|197705147|gb|EDY50959.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|294326310|gb|EFG07953.1| 30S ribosomal protein S18 2 [Streptomyces clavuligerus ATCC
27064]
Length = 78
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTVYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|34500936|ref|NP_904121.1| ribosomal protein S18 [Amborella trichopoda]
gi|62287447|sp|Q70XY4|RR18_AMBTC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|34481651|emb|CAD45128.1| ribosomal protein S18 [Amborella trichopoda]
Length = 101
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L+ RF+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLIGRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSPLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|307718999|ref|YP_003874531.1| 30S ribosomal protein S18 [Spirochaeta thermophila DSM 6192]
gi|306532724|gb|ADN02258.1| 30S ribosomal protein S18 [Spirochaeta thermophila DSM 6192]
Length = 102
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
IDYK +L +FL++ GKI+P RI+ S K QR L + IK+AR L L+
Sbjct: 52 IDYKKPEVLRQFLTENGKILPRRITGTSAKNQRRLVREIKKARILALL 99
>gi|224179453|ref|YP_002600865.1| ribosomal protein S18 [Pycnococcus provasolii]
gi|217314496|gb|ACK36838.1| ribosomal protein S18 [Pycnococcus provasolii]
Length = 64
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK +RLL R + G+I+P R+ V ++Q +LA++IKRAR L L+ +V
Sbjct: 10 IDYKSVRLLRRCIGSDGRILPRRVLQVPVRQQAKLARSIKRARILALLPFVQ 61
>gi|41409865|ref|NP_962701.1| 30S ribosomal protein S18 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|59798950|sp|Q73TF1|RS182_MYCPA RecName: Full=30S ribosomal protein S18 2
gi|41398697|gb|AAS06317.1| RpsR2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 88
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 10/73 (13%)
Query: 18 RKSCPLSGK----------GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
R+ PL+G+ G +DYKD L F+S+RGKI +++ +S ++QR++A
Sbjct: 9 RRPAPLAGRARKKNLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQQQRQVAT 68
Query: 68 AIKRARYLGLIAY 80
AIK AR + L+ Y
Sbjct: 69 AIKNAREMALLPY 81
>gi|134301135|ref|YP_001114631.1| 30S ribosomal protein S18 [Desulfotomaculum reducens MI-1]
gi|205557265|sp|A4J9Q3|RS18_DESRM RecName: Full=30S ribosomal protein S18
gi|134053835|gb|ABO51806.1| SSU ribosomal protein S18P [Desulfotomaculum reducens MI-1]
Length = 77
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C A IDYK+ L +++++RGKI+P RIS QR L AIKR+R + L+ +
Sbjct: 14 CSFCVDKATSIDYKETSKLRKYVTERGKILPRRISGNCAHHQRMLTTAIKRSRNIALLPF 73
>gi|315186485|gb|EFU20245.1| SSU ribosomal protein S18P [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
IDYK +L +FL++ GKI+P RI+ S K QR L + IK+AR L L+
Sbjct: 51 IDYKKPEVLRQFLTENGKILPRRITGTSAKNQRRLVREIKKARILALL 98
>gi|296274355|ref|YP_003656986.1| 30S ribosomal protein S18 [Arcobacter nitrofigilis DSM 7299]
gi|296098529|gb|ADG94479.1| ribosomal protein S18 [Arcobacter nitrofigilis DSM 7299]
Length = 85
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYK+ +L +S+RGKI+P R++ S + Q + AIKRAR++ L
Sbjct: 9 KKYCKYTEMKIDFIDYKNTEILKISMSERGKIMPRRLTGNSKRAQEMVELAIKRARHMAL 68
Query: 78 IAYV 81
+ Y+
Sbjct: 69 VPYI 72
>gi|246880781|gb|ACS95093.1| ribosomal protein S18 [Dunaliella salina]
Length = 140
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 82 IDYKHCGLLQRYIGLGGKILPRRQTRLTAKQQRYIAKTIKSARVMGLLPFVS 133
>gi|78103272|ref|YP_358600.1| ribosomal protein S18 [Phalaenopsis aphrodite subsp. formosana]
gi|122239293|sp|Q3BAL8|RR18_PHAAO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|58802802|gb|AAW82522.1| ribosomal protein S18 [Phalaenopsis aphrodite subsp. formosana]
Length = 101
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G +IDY+++ L++RFLS++GKI+ R + ++ K+QR + AIK+AR L L+ +
Sbjct: 19 LPPIGSGD-QIDYRNMSLISRFLSEQGKILSRRTNRLTLKQQRLITIAIKQARILSLLPF 77
Query: 81 VN 82
N
Sbjct: 78 RN 79
>gi|149390376|ref|YP_001294374.1| ribosomal protein S18 [Dioscorea elephantipes]
gi|205831389|sp|A6MMM9|RR18_DIOEL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148668068|gb|ABR01452.1| ribosomal protein S18 [Dioscorea elephantipes]
Length = 101
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G +I+Y+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ +
Sbjct: 19 LPPIGSGD-QINYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|218886447|ref|YP_002435768.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735112|sp|B8DRL3|RS18_DESVM RecName: Full=30S ribosomal protein S18
gi|218757401|gb|ACL08300.1| ribosomal protein S18 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 87
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFTPRRKFCRFCADKDLPLDYKRADILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLFYT 74
>gi|255071273|ref|XP_002507718.1| predicted protein [Micromonas sp. RCC299]
gi|226522993|gb|ACO68976.1| predicted protein [Micromonas sp. RCC299]
Length = 237
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPR-----IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
L +R++ + S PL G A R +DY++ RLLN F+S GKI+P R S +S K R
Sbjct: 149 LDKRSIERQAGSAPLRGSRAHRRLSNVLDYRNARLLNLFVSDAGKILPRRRSRLSAKVHR 208
Query: 64 ELAKAIKRARYLGLIAYVN 82
+ K IK +R +G+ A
Sbjct: 209 KAVKHIKTSRVMGISAMTE 227
>gi|318059780|ref|ZP_07978503.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actG]
gi|318075180|ref|ZP_07982512.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actF]
gi|333022795|ref|ZP_08450859.1| putative 30S ribosomal protein S18 [Streptomyces sp. Tu6071]
gi|332742647|gb|EGJ73088.1| putative 30S ribosomal protein S18 [Streptomyces sp. Tu6071]
Length = 79
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 12 RNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
R HRR + PL G IDYKD LL +F+S RGKI R++ VS ++QR+LA
Sbjct: 3 RTTHHRRDTRASRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQLA 62
Query: 67 KAIKRARYLGLIAY 80
AIK AR + L+ Y
Sbjct: 63 AAIKNAREMALLPY 76
>gi|170784748|ref|YP_001718664.1| ribosomal protein S18 [Trachelium caeruleum]
gi|156598824|gb|ABU85665.1| ribosomal protein S18 [Trachelium caeruleum]
gi|157267496|gb|ABV26489.1| ribosomal protein S18 [Trachelium caeruleum]
Length = 111
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S RR+ P+ + RIDY++I LL RF+S +GKI+ R + V+ K+QR +
Sbjct: 15 PFHKSKRSFRRRLPPI--QPGDRIDYRNISLLCRFISDQGKILSRRRNKVTLKQQRLITI 72
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 73 AIKQARILSSLPFIN 87
>gi|319957607|ref|YP_004168870.1| SSU ribosomal protein s18p [Nitratifractor salsuginis DSM 16511]
gi|319420011|gb|ADV47121.1| SSU ribosomal protein S18P [Nitratifractor salsuginis DSM 16511]
Length = 87
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD++LL LS+R KI+P R++ K Q + AIKRAR
Sbjct: 8 KKRYCRYCEQKVDFIDYKDLQLLKFSLSERYKIMPRRLTGNCKKHQEMVTAAIKRARQTA 67
Query: 77 LIAYV 81
LI Y+
Sbjct: 68 LIPYI 72
>gi|224117578|ref|XP_002331671.1| predicted protein [Populus trichocarpa]
gi|222874090|gb|EEF11221.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P +RR R + C + + + D++++R L F++ G I+ R + +S K QR++A+
Sbjct: 156 PFVRR--ERRDEFCVTTAEVLSKADFRNVRFLANFITDAGIIIKRRQTGISAKAQRKVAR 213
Query: 68 AIKRARYLGLIAYVNL 83
IK AR GL+ + +
Sbjct: 214 EIKTARAFGLMPFTTM 229
>gi|302523357|ref|ZP_07275699.1| ribosomal protein S18 [Streptomyces sp. SPB78]
gi|302432252|gb|EFL04068.1| ribosomal protein S18 [Streptomyces sp. SPB78]
Length = 79
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 12 RNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
R HRR + PL G IDYKD LL +F+S RGKI R++ VS ++QR+LA
Sbjct: 3 RTTHHRRDTRAPRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQLA 62
Query: 67 KAIKRARYLGLIAY 80
AIK AR + L+ Y
Sbjct: 63 AAIKNAREMALLPY 76
>gi|111226184|ref|YP_716978.1| 30S ribosomal protein S18 [Frankia alni ACN14a]
gi|123043775|sp|Q0RAR6|RS182_FRAAA RecName: Full=30S ribosomal protein S18 2
gi|111153716|emb|CAJ65474.1| 30S ribosomal subunit protein S18 [Frankia alni ACN14a]
Length = 73
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C ID+KD LL +++S RGKI R+S + QR++A A+K +R +
Sbjct: 5 KKKVCVFCKDKVEYIDFKDTSLLRKYISDRGKIRARRVSGNCSQHQRDVATAVKNSREMA 64
Query: 77 LIAYV 81
L+ Y
Sbjct: 65 LLPYT 69
>gi|86743195|ref|YP_483595.1| 30S ribosomal protein S18 [Frankia sp. CcI3]
gi|123723312|sp|Q2J4C6|RS18_FRASC RecName: Full=30S ribosomal protein S18
gi|86570057|gb|ABD13866.1| SSU ribosomal protein S18P [Frankia sp. CcI3]
Length = 78
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C ID+KD LL +++S RGKI R+S + QR++A A+K +R +
Sbjct: 10 KKKVCVFCKDKVDYIDFKDTSLLRKYISDRGKIRARRVSGNCSQHQRDVATAVKNSREMA 69
Query: 77 LIAYV 81
L+ Y
Sbjct: 70 LLPYT 74
>gi|149174519|ref|ZP_01853145.1| 30S ribosomal protein S18 [Planctomyces maris DSM 8797]
gi|148846629|gb|EDL60966.1| 30S ribosomal protein S18 [Planctomyces maris DSM 8797]
Length = 99
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+R L L + G+I+P R + S QR + KA+ RAR++GL+ YV
Sbjct: 46 VDYKDLRTLRSLLDREGRILPRRRTGTSALYQRAVRKAVLRARFIGLLPYV 96
>gi|118486185|gb|ABK94935.1| unknown [Populus trichocarpa]
Length = 266
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P +RR R + C + + + D++++R L F++ G I+ R + +S K QR++A+
Sbjct: 158 PFVRR--ERRDEFCVTTAEVLSKADFRNVRFLANFITDAGIIIKRRQTGISAKAQRKVAR 215
Query: 68 AIKRARYLGLIAYVNL 83
IK AR GL+ + +
Sbjct: 216 EIKTARAFGLMPFTTM 231
>gi|317486567|ref|ZP_07945388.1| ribosomal protein S18 [Bilophila wadsworthia 3_1_6]
gi|316922167|gb|EFV43432.1| ribosomal protein S18 [Bilophila wadsworthia 3_1_6]
Length = 87
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +L ++++RGKI+ RI+ K QR L+ I
Sbjct: 3 FKKKFAPRRKFCRFCADADLPLDYKRPDILRDYITERGKIIARRITGTCAKHQRLLSTEI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLFYT 74
>gi|242910206|ref|YP_002970666.1| ribosomal protein S18 [Alsophila spinulosa]
gi|218454875|gb|ACK77212.1| ribosomal protein S18 [Alsophila spinulosa]
Length = 75
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDY++ LL RF+S++G+I+ R++ ++ K+QR +A AIKRAR L+ + N
Sbjct: 21 IDYRNTTLLRRFVSEQGRILSRRMNRLTSKQQRSVAVAIKRARIPALLPFSN 72
>gi|71842240|ref|YP_277328.1| ribosomal protein S18 [Emiliania huxleyi]
gi|122233608|sp|Q4G3D9|RR18_EMIHU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|60101483|gb|AAX13827.1| ribosomal protein S18 [Emiliania huxleyi]
Length = 72
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 39/51 (76%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++YKD+ +L+ F++++GKI+P R++ + K+Q+++ K IK+AR L+ +V
Sbjct: 18 LNYKDVSILSNFVNEQGKILPRRLTGLKSKQQKKVTKLIKQARIAALLPFV 68
>gi|114050735|ref|NP_001039973.1| 28S ribosomal protein S18c, mitochondrial precursor [Bos taurus]
gi|108935898|sp|P82917|RT18C_BOVIN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|86827491|gb|AAI12819.1| Mitochondrial ribosomal protein S18C [Bos taurus]
gi|296486363|gb|DAA28476.1| 28S ribosomal protein S18c, mitochondrial precursor [Bos taurus]
Length = 143
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ LG
Sbjct: 64 KKCILCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQILGF 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|111020419|ref|YP_703391.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|226362637|ref|YP_002780415.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
gi|123340397|sp|Q0SB53|RS181_RHOSR RecName: Full=30S ribosomal protein S18 1
gi|110819949|gb|ABG95233.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|226241122|dbj|BAH51470.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
Length = 80
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +I+YKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKV-MKKKICIFCKEKNTQINYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDV 60
Query: 66 AKAIKRARYLGLIAYVNL 83
A A+K +R + L+ Y +
Sbjct: 61 AIAVKNSREVALLPYATV 78
>gi|31544817|ref|NP_853395.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(low)]
gi|59798824|sp|Q7NAM3|RS18_MYCGA RecName: Full=30S ribosomal protein S18
gi|31541663|gb|AAP56963.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(low)]
gi|284930891|gb|ADC30830.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(high)]
gi|284931647|gb|ADC31585.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. F]
Length = 108
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RK C KG ++DYKD+ L + L+ KIV R S + QR ++ AIK+AR
Sbjct: 40 SRSRKLCHFCAKGILKVDYKDVNTLRKNLNSYAKIVSRRQSGNCNLHQRHVSNAIKKARI 99
Query: 75 LGLIAYV 81
+ L+ +V
Sbjct: 100 MALLPFV 106
>gi|294656734|ref|XP_459046.2| DEHA2D13156p [Debaryomyces hansenii CBS767]
gi|199431699|emb|CAG87214.2| DEHA2D13156p [Debaryomyces hansenii]
Length = 192
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ V + + P G +D Y +L+RFLS G+I+P I+ + K Q++L+ AI
Sbjct: 109 RQAVPYEKMVDPFQKAGVDPLDIYTMPEILSRFLSSTGQILPREITGCNAKNQKKLSNAI 168
Query: 70 KRARYLGLIAYVN 82
KRAR GL++ V+
Sbjct: 169 KRARTCGLLSTVH 181
>gi|108773084|ref|YP_635993.1| ribosomal protein S18 [Scenedesmus obliquus]
gi|122231586|sp|Q1KVT1|RR18_SCEOB RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88696650|gb|ABD48276.1| ribosomal protein S18 [Scenedesmus obliquus]
Length = 188
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V
Sbjct: 130 IDYKHCGLLQRYIGLGGKILPRRQTKLTAKQQRYVAKTIKSARIMGLLPFV 180
>gi|304322971|ref|YP_003795507.1| ribosomal protein S18 [Floydiella terrestris]
gi|270048170|gb|ACZ58465.1| ribosomal protein S18 [Floydiella terrestris]
Length = 231
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK+ LL ++S GKI+P R + ++ K+QR L KAIK AR L L+ +V
Sbjct: 173 VDYKNRSLLQEYISFDGKILPRRKTGITTKQQRYLTKAIKTARILCLLPFV 223
>gi|281356649|ref|ZP_06243140.1| ribosomal protein S18 [Victivallis vadensis ATCC BAA-548]
gi|281316776|gb|EFB00799.1| ribosomal protein S18 [Victivallis vadensis ATCC BAA-548]
Length = 77
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + K C ID+KD L +F +++GKI+P RI+ Q+ LA AIK
Sbjct: 9 RRRSPAKPKICRFCEAKVSYIDFKDAETLMKFQTEKGKIMPRRITGTCLDHQKMLATAIK 68
Query: 71 RARYLGLI 78
RAR + L+
Sbjct: 69 RARIIALV 76
>gi|251772232|gb|EES52802.1| ribosomal protein S18 [Leptospirillum ferrodiazotrophum]
Length = 76
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C + IDYKD L+ +L++RGKI+P R++ QR +++AIK++R +
Sbjct: 10 RKKVCRFCTEFLA-IDYKDQTTLHSYLTERGKILPRRLTGTCSHHQRAVSRAIKQSRNVA 68
Query: 77 LIAYVN 82
+A+
Sbjct: 69 FLAFAE 74
>gi|15828448|ref|NP_302711.1| 30S ribosomal protein S18 [Mycobacterium leprae TN]
gi|221230925|ref|YP_002504341.1| 30S ribosomal protein S18 [Mycobacterium leprae Br4923]
gi|6226084|sp|O53125|RS18_MYCLE RecName: Full=30S ribosomal protein S18
gi|254812949|sp|B8ZTL5|RS18_MYCLB RecName: Full=30S ribosomal protein S18
gi|2959410|emb|CAA17952.1| 30s ribosomal protein s18 [Mycobacterium leprae]
gi|13093878|emb|CAC32215.1| 30S ribosomal protein S18 [Mycobacterium leprae]
gi|219934032|emb|CAR72783.1| 30S ribosomal protein S18 [Mycobacterium leprae Br4923]
Length = 84
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K +IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKKNQQIDYKDTTLLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|7705630|ref|NP_057151.1| 28S ribosomal protein S18c, mitochondrial precursor [Homo sapiens]
gi|55622668|ref|XP_517249.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial isoform 2 [Pan
troglodytes]
gi|332819380|ref|XP_003310352.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819382|ref|XP_003339105.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819384|ref|XP_003310353.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819386|ref|XP_003310355.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|24212202|sp|Q9Y3D5|RT18C_HUMAN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|4929737|gb|AAD34129.1|AF151892_1 CGI-134 protein [Homo sapiens]
gi|13528768|gb|AAH05186.1| Mitochondrial ribosomal protein S18C [Homo sapiens]
gi|119626343|gb|EAX05938.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|119626345|gb|EAX05940.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|312150164|gb|ADQ31594.1| mitochondrial ribosomal protein S18C [synthetic construct]
Length = 142
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 63 KKCILCGK---HVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 119
Query: 78 I 78
+
Sbjct: 120 M 120
>gi|114107068|ref|YP_740224.1| ribosomal protein S18 [Liriodendron tulipifera]
gi|122239941|sp|Q0G9J7|RR18_LIRTU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113201016|gb|ABI32531.1| ribosomal protein S18 [Liriodendron tulipifera]
Length = 101
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L+++F+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISQFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|297673900|ref|XP_002814984.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pongo
abelii]
Length = 144
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 65 KKCILCGK---HVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 121
Query: 78 I 78
+
Sbjct: 122 M 122
>gi|91204547|emb|CAJ70775.1| strongly similar to 30S ribosomal subunit protein S18 [Candidatus
Kuenenia stuttgartiensis]
Length = 73
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + ++ C G +DYKDI+ L + + RGK+ + S + QR + +I
Sbjct: 1 MTRKIFNKTSKCRFCRMGVEEVDYKDIQNLQKLATTRGKLFSRKRSGNCARHQRSVKMSI 60
Query: 70 KRARYLGLIAYVN 82
KRAR++ L+ YV
Sbjct: 61 KRARFMALLPYVT 73
>gi|297158762|gb|ADI08474.1| 30S ribosomal protein S18 [Streptomyces bingchenggensis BCW-1]
Length = 64
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+ Y +
Sbjct: 10 VDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPYTS 61
>gi|295837785|ref|ZP_06824718.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|302520485|ref|ZP_07272827.1| ribosomal protein S18 [Streptomyces sp. SPB78]
gi|318058998|ref|ZP_07977721.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actG]
gi|318075524|ref|ZP_07982856.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actF]
gi|197698943|gb|EDY45876.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|302429380|gb|EFL01196.1| ribosomal protein S18 [Streptomyces sp. SPB78]
Length = 78
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +++S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKVTYVDYKDTNMLRKYISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|32480865|ref|NP_862776.1| ribosomal protein S18 [Calycanthus floridus var. glaucus]
gi|62287460|sp|Q7YJV4|RR18_CALFG RecName: Full=30S ribosomal protein S18, chloroplastic
gi|32399401|emb|CAD28743.1| ribosomal protein S18 [Calycanthus floridus var. glaucus]
Length = 100
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P G G RIDY+++ L+++F+S++GKI+ R++ ++ K+QR + AIK+AR L + +
Sbjct: 19 LPPIGSGD-RIDYRNMSLISQFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPF 77
Query: 81 VN 82
+N
Sbjct: 78 LN 79
>gi|332233407|ref|XP_003265893.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 1
[Nomascus leucogenys]
gi|332233409|ref|XP_003265894.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 2
[Nomascus leucogenys]
gi|332233411|ref|XP_003265895.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 3
[Nomascus leucogenys]
Length = 144
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 65 KKCILCGK---HVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 121
Query: 78 I 78
+
Sbjct: 122 M 122
>gi|254796461|ref|YP_003081297.1| hypothetical protein NRI_0061 [Neorickettsia risticii str.
Illinois]
gi|254589690|gb|ACT69052.1| conserved domain protein [Neorickettsia risticii str. Illinois]
Length = 84
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ L+ RF++ G+++ R + +S KKQR++AK +++ ++L L+ Y +
Sbjct: 30 FDYKNVALIKRFMTSVGRVLSRRATGLSAKKQRKMAKEVRKMKFLALVPYCD 81
>gi|296167064|ref|ZP_06849476.1| 30S ribosomal protein S18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897621|gb|EFG77215.1| 30S ribosomal protein S18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 84
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKNDQSIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|12835208|dbj|BAB23188.1| unnamed protein product [Mus musculus]
Length = 143
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ +G
Sbjct: 64 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGF 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|257057878|ref|YP_003135710.1| 30S ribosomal protein S18P [Saccharomonospora viridis DSM 43017]
gi|256587750|gb|ACU98883.1| SSU ribosomal protein S18P [Saccharomonospora viridis DSM 43017]
Length = 82
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G P IDYKD +L +++S RGKI R++ + QR++A A+K +R + L+
Sbjct: 17 CKAEKAGHPEPIDYKDTNMLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREMALLP 76
Query: 80 YVN 82
Y +
Sbjct: 77 YTS 79
>gi|58037129|ref|NP_081102.1| 28S ribosomal protein S18c, mitochondrial precursor [Mus musculus]
gi|24212186|sp|Q8R2L5|RT18C_MOUSE RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|20306712|gb|AAH28442.1| Mitochondrial ribosomal protein S18C [Mus musculus]
gi|74219265|dbj|BAE26766.1| unnamed protein product [Mus musculus]
gi|148688329|gb|EDL20276.1| mitochondrial ribosomal protein S18C, isoform CRA_c [Mus musculus]
Length = 143
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ +G
Sbjct: 64 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGF 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|291000780|ref|XP_002682957.1| small subunit ribosomal protein S18 [Naegleria gruberi]
gi|284096585|gb|EFC50213.1| small subunit ribosomal protein S18 [Naegleria gruberi]
Length = 399
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I YK+ LL +F+SQ G+I+P R + V + + + +K+AR+LGL++Y
Sbjct: 235 KISYKNPSLLLKFVSQSGRIIPKRFTGVRRRTHKRIETEVKKARFLGLLSY 285
>gi|289066848|ref|YP_003434366.1| ribosomal protein S18 [Vigna radiata]
gi|259020035|gb|ACV90233.1| ribosomal protein S18 [Vigna radiata]
Length = 102
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + RIDYK++ L+ RF+S++GKI+ R++ ++ K+QR + AIK+AR
Sbjct: 14 SFRRRLPPI--QSGDRIDYKNMGLICRFISEQGKILSRRVNRLTLKQQRLITIAIKQARI 71
Query: 75 LGLIAYV 81
L + ++
Sbjct: 72 LSSLPFL 78
>gi|227325958|ref|ZP_03829982.1| 30S ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 71
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K
Sbjct: 7 RRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAK 50
>gi|169142811|ref|YP_001687236.1| ribosomal protein S18 [Aneura mirabilis]
gi|205831414|sp|B0YPQ0|RR18_ANEMR RecName: Full=Plastid 30S ribosomal protein S18
gi|153973837|gb|ABS54497.1| ribosomal protein S18 [Aneura mirabilis]
Length = 75
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDY++I LL RF+S++G+I+ R + ++ K+QR L AIK+AR L + + N
Sbjct: 21 IDYRNISLLRRFVSEQGRILSRRTNRLTSKQQRVLTAAIKQARILASLPFPN 72
>gi|325971036|ref|YP_004247227.1| 30S ribosomal protein S18 [Spirochaeta sp. Buddy]
gi|324026274|gb|ADY13033.1| 30S ribosomal protein S18 [Spirochaeta sp. Buddy]
Length = 96
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 12 RNVSHRRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + R+K C + P DYK+ +L R++++RGKI+P+RI+ K QR + IK
Sbjct: 26 RKPAFRKKVCKFCTQNLTP--DYKNPEMLRRYITERGKILPARITGCCAKHQRAVTNEIK 83
Query: 71 RARYLGLIAY 80
+AR L + +
Sbjct: 84 KARVLAYLPF 93
>gi|88608040|ref|YP_505962.1| ribosomal protein S18 [Neorickettsia sennetsu str. Miyayama]
gi|123763737|sp|Q2GEY4|RS18_NEOSM RecName: Full=30S ribosomal protein S18
gi|88600209|gb|ABD45677.1| ribosomal protein S18 [Neorickettsia sennetsu str. Miyayama]
Length = 73
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ L+ RF++ G+++ R + +S KKQR++AK +++ ++L L+ Y +
Sbjct: 19 FDYKNVALIKRFMTPVGRVLSRRATGLSAKKQRKMAKEVRKMKFLALVPYCD 70
>gi|118470101|ref|YP_891095.1| 30S ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
gi|205556579|sp|A0R7F7|RS182_MYCS2 RecName: Full=30S ribosomal protein S18 2
gi|118171388|gb|ABK72284.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
Length = 84
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCSKKGQTIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAVAVKNAREVALL 77
Query: 79 AY 80
+
Sbjct: 78 PF 79
>gi|42522507|ref|NP_967887.1| 30S ribosomal protein S18 [Bdellovibrio bacteriovorus HD100]
gi|81697891|sp|Q6MPB8|RS18_BDEBA RecName: Full=30S ribosomal protein S18
gi|39575039|emb|CAE78880.1| 30S ribosomal protein S18 [Bdellovibrio bacteriovorus HD100]
Length = 89
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
DYKD L RF+ GKI PSRIS +S +Q+ +A A+K++R L L+
Sbjct: 19 FDYKDPASLTRFIGDGGKITPSRISKLSVAQQKRVAAAVKKSRNLALL 66
>gi|301167905|emb|CBW27490.1| putative 30S ribosomal protein S6 and S18 fusion [Bacteriovorax
marinus SJ]
Length = 207
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 17 RRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRKSC + P D+KD + +++ GKI P R+S +S K R AIKRAR +
Sbjct: 138 RRKSCWFAANNITP--DWKDPKTYAWLINEFGKINPGRVSGISRKAHRLADTAIKRARNM 195
Query: 76 GLIAYV 81
G+++++
Sbjct: 196 GVVSHI 201
>gi|108802327|ref|YP_642524.1| 30S ribosomal protein S18 [Mycobacterium sp. MCS]
gi|119871480|ref|YP_941432.1| 30S ribosomal protein S18 [Mycobacterium sp. KMS]
gi|126438307|ref|YP_001073998.1| 30S ribosomal protein S18 [Mycobacterium sp. JLS]
gi|123177801|sp|Q1B0W6|RS18_MYCSS RecName: Full=30S ribosomal protein S18
gi|166220961|sp|A3Q8N0|RS18_MYCSJ RecName: Full=30S ribosomal protein S18
gi|166220962|sp|A1UP84|RS18_MYCSK RecName: Full=30S ribosomal protein S18
gi|108772746|gb|ABG11468.1| SSU ribosomal protein S18P [Mycobacterium sp. MCS]
gi|119697569|gb|ABL94642.1| SSU ribosomal protein S18P [Mycobacterium sp. KMS]
gi|126238107|gb|ABO01508.1| SSU ribosomal protein S18P [Mycobacterium sp. JLS]
Length = 84
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCSKKGQDIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAVAVKNAREVALL 77
Query: 79 AY 80
+
Sbjct: 78 PF 79
>gi|26353262|dbj|BAC40261.1| unnamed protein product [Mus musculus]
gi|148688326|gb|EDL20273.1| mitochondrial ribosomal protein S18C, isoform CRA_a [Mus musculus]
Length = 128
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
K C L K R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ +G
Sbjct: 64 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMG 119
>gi|118615985|ref|YP_904317.1| 30S ribosomal protein S18 [Mycobacterium ulcerans Agy99]
gi|183980109|ref|YP_001848400.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium marinum M]
gi|205556387|sp|B2HIB9|RS181_MYCMM RecName: Full=30S ribosomal protein S18 1
gi|205556430|sp|A0PKH7|RS181_MYCUA RecName: Full=30S ribosomal protein S18 1
gi|118568095|gb|ABL02846.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium ulcerans Agy99]
gi|183173435|gb|ACC38545.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium marinum M]
Length = 84
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIALAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|148688327|gb|EDL20274.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus
musculus]
gi|148688328|gb|EDL20275.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus
musculus]
Length = 89
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ +G
Sbjct: 10 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGF 66
Query: 78 I 78
+
Sbjct: 67 M 67
>gi|239945965|ref|ZP_04697902.1| putative 30S ribosomal protein S18 [Streptomyces roseosporus NRRL
15998]
gi|239992434|ref|ZP_04713098.1| putative 30S ribosomal protein S18 [Streptomyces roseosporus NRRL
11379]
gi|291449420|ref|ZP_06588810.1| 30S ribosomal protein S18 2 [Streptomyces roseosporus NRRL 15998]
gi|291352367|gb|EFE79271.1| 30S ribosomal protein S18 2 [Streptomyces roseosporus NRRL 15998]
Length = 82
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G IDYKD LL RF+S RGKI R++ +S ++QR++A AIK AR + L+ Y
Sbjct: 17 PLDAAGITYIDYKDTDLLRRFISDRGKIRSRRVTRISAQQQRQMAAAIKNAREMALLPY 75
>gi|326918710|ref|XP_003205631.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Meleagris gallopavo]
Length = 109
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G ++DYK+++LL++F+S G+I I+ + KKQ+E++KAIKRA LG
Sbjct: 32 KKCILCGI---KVDYKNVQLLSQFVSPYSGRIYGRHITGLCDKKQKEISKAIKRAHILGF 88
Query: 78 I 78
+
Sbjct: 89 M 89
>gi|41406167|ref|NP_959003.1| 30S ribosomal protein S18 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466677|ref|YP_879375.1| 30S ribosomal protein S18 [Mycobacterium avium 104]
gi|254773122|ref|ZP_05214638.1| 30S ribosomal protein S18 [Mycobacterium avium subsp. avium ATCC
25291]
gi|254818591|ref|ZP_05223592.1| 30S ribosomal protein S18 [Mycobacterium intracellulare ATCC
13950]
gi|59798951|sp|Q744X6|RS181_MYCPA RecName: Full=30S ribosomal protein S18 1
gi|166220960|sp|A0Q8Y7|RS18_MYCA1 RecName: Full=30S ribosomal protein S18
gi|41394515|gb|AAS02386.1| RpsR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167964|gb|ABK68861.1| ribosomal protein S18 [Mycobacterium avium 104]
Length = 84
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|15839432|ref|NP_334469.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31791232|ref|NP_853725.1| 30S ribosomal protein S18 [Mycobacterium bovis AF2122/97]
gi|57116686|ref|YP_177688.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Rv]
gi|121635965|ref|YP_976188.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659815|ref|YP_001281338.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148821245|ref|YP_001285999.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis F11]
gi|167970581|ref|ZP_02552858.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|215406045|ref|ZP_03418226.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 02_1987]
gi|215413916|ref|ZP_03422578.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 94_M4241A]
gi|215425250|ref|ZP_03423169.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T92]
gi|215432964|ref|ZP_03430883.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|215448331|ref|ZP_03435083.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|218755778|ref|ZP_03534574.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis GM 1503]
gi|219555834|ref|ZP_03534910.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T17]
gi|224988438|ref|YP_002643105.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253796970|ref|YP_003029971.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis KZN
1435]
gi|254233454|ref|ZP_04926780.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis C]
gi|254366513|ref|ZP_04982557.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
str. Haarlem]
gi|254548987|ref|ZP_05139434.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184911|ref|ZP_05762385.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CPHL_A]
gi|260199048|ref|ZP_05766539.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|260203196|ref|ZP_05770687.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis K85]
gi|289441422|ref|ZP_06431166.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289445581|ref|ZP_06435325.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis CPHL_A]
gi|289552304|ref|ZP_06441514.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 605]
gi|289567941|ref|ZP_06448168.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis T17]
gi|289572631|ref|ZP_06452858.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis K85]
gi|289747824|ref|ZP_06507202.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis 02_1987]
gi|289748521|ref|ZP_06507899.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis T92]
gi|289756114|ref|ZP_06515492.1| rpsR [Mycobacterium tuberculosis EAS054]
gi|289760153|ref|ZP_06519531.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289764169|ref|ZP_06523547.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis GM 1503]
gi|294995671|ref|ZP_06801362.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 210]
gi|297632526|ref|ZP_06950306.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN 4207]
gi|297729497|ref|ZP_06958615.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN R506]
gi|298527453|ref|ZP_07014862.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis
94_M4241A]
gi|306778346|ref|ZP_07416683.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu001]
gi|306778877|ref|ZP_07417214.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu002]
gi|306782666|ref|ZP_07420988.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu003]
gi|306787032|ref|ZP_07425354.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu004]
gi|306791590|ref|ZP_07429892.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu005]
gi|306795653|ref|ZP_07433955.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu006]
gi|306801628|ref|ZP_07438296.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu008]
gi|306805837|ref|ZP_07442505.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu007]
gi|306970234|ref|ZP_07482895.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu009]
gi|306974467|ref|ZP_07487128.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu010]
gi|307082175|ref|ZP_07491345.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu011]
gi|313656826|ref|ZP_07813706.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN V2475]
gi|59800210|sp|P69230|RS181_MYCTU RecName: Full=30S ribosomal protein S18 1
gi|59800211|sp|P69231|RS181_MYCBO RecName: Full=30S ribosomal protein S18 1
gi|205556364|sp|A1KEM3|RS181_MYCBP RecName: Full=30S ribosomal protein S18 1
gi|205556406|sp|A5TYC6|RS181_MYCTA RecName: Full=30S ribosomal protein S18 1
gi|13879104|gb|AAK44283.1| ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31616817|emb|CAD92918.1| PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 [Mycobacterium bovis
AF2122/97]
gi|41352727|emb|CAE55237.1| PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 [Mycobacterium
tuberculosis H37Rv]
gi|121491612|emb|CAL70070.1| Probable 30s ribosomal protein s18-1 rpsR1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124603247|gb|EAY61522.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis C]
gi|134152025|gb|EBA44070.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
str. Haarlem]
gi|148503967|gb|ABQ71776.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148719772|gb|ABR04397.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
F11]
gi|224771551|dbj|BAH24357.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253318473|gb|ACT23076.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis KZN
1435]
gi|289414341|gb|EFD11581.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289418539|gb|EFD15740.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis CPHL_A]
gi|289436936|gb|EFD19429.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 605]
gi|289537062|gb|EFD41640.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis K85]
gi|289541694|gb|EFD45343.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis T17]
gi|289688352|gb|EFD55840.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis 02_1987]
gi|289689108|gb|EFD56537.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis T92]
gi|289696701|gb|EFD64130.1| rpsR [Mycobacterium tuberculosis EAS054]
gi|289711675|gb|EFD75691.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis GM 1503]
gi|289715717|gb|EFD79729.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298497247|gb|EFI32541.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis
94_M4241A]
gi|308213489|gb|EFO72888.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu001]
gi|308328206|gb|EFP17057.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu002]
gi|308332512|gb|EFP21363.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu003]
gi|308336324|gb|EFP25175.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu004]
gi|308339927|gb|EFP28778.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu005]
gi|308343943|gb|EFP32794.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu006]
gi|308347726|gb|EFP36577.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu007]
gi|308351643|gb|EFP40494.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu008]
gi|308352350|gb|EFP41201.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu009]
gi|308356250|gb|EFP45101.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu010]
gi|308360241|gb|EFP49092.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu011]
gi|323717394|gb|EGB26599.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
CDC1551A]
gi|326905815|gb|EGE52748.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis W-148]
gi|328456760|gb|AEB02183.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 4207]
Length = 84
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C K IDYKD LL ++S+RGKI R++ + QR++A A+K AR + L+
Sbjct: 18 RKCVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIALAVKNAREVALL 77
Query: 79 AYVN 82
+ +
Sbjct: 78 PFTS 81
>gi|41179036|ref|NP_958392.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|18201981|sp|O20032|RR18_CHLRE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|2598288|emb|CAA74009.1| 30S ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|28269759|tpg|DAA00937.1| TPA_inf: ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|213517418|gb|ACJ50124.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
Length = 137
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 79 IDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVS 130
>gi|261888174|gb|ACY06029.1| ribosomal protein S18 [Volvox carteri f. nagariensis]
Length = 137
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 79 IDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRYVAKTIKTARVMGLLPFVS 130
>gi|224373383|ref|YP_002607755.1| 30S ribosomal protein S18 [Nautilia profundicola AmH]
gi|223588945|gb|ACM92681.1| ribosomal protein S18 [Nautilia profundicola AmH]
Length = 94
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKD+ L+ LS+R KI+P R++ K Q + KAIKRAR + LI YV
Sbjct: 24 IGYKDLDLIKYSLSERYKIMPRRLTGTCKKHQDMVTKAIKRARQVALIPYV 74
>gi|290487244|gb|ADD30006.1| ribosomal protein S18 [Lonicera japonica]
Length = 152
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
I+Y+++ L++RF+S +GKI+P R+ ++ K+QR + AIK+AR L + ++N
Sbjct: 49 IEYRNMSLISRFISDQGKILPRRVKRLTLKQQRLITLAIKQARILSSLPFLN 100
>gi|149194318|ref|ZP_01871415.1| 30S ribosomal protein S18 [Caminibacter mediatlanticus TB-2]
gi|149135493|gb|EDM23972.1| 30S ribosomal protein S18 [Caminibacter mediatlanticus TB-2]
Length = 93
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKD+ L+ LS+R KI+P R++ K Q + KAIKRAR + LI YV
Sbjct: 24 IGYKDLELIKYSLSERYKIMPRRLTGTCKKHQDMVQKAIKRARQVALIPYV 74
>gi|169832351|ref|YP_001718333.1| 30S ribosomal protein S18 [Candidatus Desulforudis audaxviator
MP104C]
gi|205557228|sp|B1I6S9|RS18_DESAP RecName: Full=30S ribosomal protein S18
gi|169639195|gb|ACA60701.1| ribosomal protein S18 [Candidatus Desulforudis audaxviator
MP104C]
Length = 75
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD L +++++RGKI+P RI+ QR L +IKR+R++ L+ +
Sbjct: 13 CSFCVDKIAVIDYKDTPRLKKYITERGKILPRRITGNCAHHQRMLTVSIKRSRHMALLPF 72
>gi|2887383|emb|CAA76244.1| rps18 [Chlamydomonas reinhardtii]
Length = 125
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 67 IDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVS 118
>gi|293363239|ref|ZP_06610123.1| ribosomal protein S18 [Mycoplasma alligatoris A21JP2]
gi|292553098|gb|EFF41847.1| ribosomal protein S18 [Mycoplasma alligatoris A21JP2]
Length = 85
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKD+ L R+++ G+I P S K QR+++ AIKRAR + + Y
Sbjct: 17 CEFCENSVLYIDYKDVETLKRYVNATGQIKPKANSGACAKHQRKVSTAIKRARQIAFMPY 76
Query: 81 V 81
Sbjct: 77 T 77
>gi|71033085|ref|XP_766184.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353141|gb|EAN33901.1| hypothetical protein, conserved [Theileria parva]
Length = 378
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K L+ P + D+ +L+ F+SQ G+I+P RI+ + K+Q ++ KAIK AR L
Sbjct: 245 RNKRLILNNNNKP-FSFHDLHVLHNFISQDGQILPRRINMTTRKQQIQIFKAIKIARNLA 303
Query: 77 LIAYVN 82
L Y N
Sbjct: 304 LFPYNN 309
>gi|289547949|ref|YP_003472937.1| ribosomal protein S18 [Thermocrinis albus DSM 14484]
gi|289181566|gb|ADC88810.1| ribosomal protein S18 [Thermocrinis albus DSM 14484]
Length = 71
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
YK+ + L +FLS+RGKI+ R +++ K QR LA+ IKRAR L L+ YV
Sbjct: 21 YKNYQELAQFLSERGKIIGRRQNNLCAKHQRILAREIKRARQLALLPYV 69
>gi|327537748|gb|EGF24453.1| Ribosomal protein S18 [Rhodopirellula baltica WH47]
Length = 138
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 86 VDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 137
>gi|325106908|ref|YP_004267976.1| 30S ribosomal protein S18P [Planctomyces brasiliensis DSM 5305]
gi|324967176|gb|ADY57954.1| SSU ribosomal protein S18P [Planctomyces brasiliensis DSM 5305]
Length = 92
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD++ L + + + GKI P R + S QR + AI RAR++GL+ YV
Sbjct: 39 VDYKDVKTLRQLIDREGKIQPRRRTGTSALYQRAVRHAILRARFMGLLPYV 89
>gi|78356456|ref|YP_387905.1| 30S ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123741297|sp|Q312D6|RS18_DESDG RecName: Full=30S ribosomal protein S18
gi|78218861|gb|ABB38210.1| SSU ribosomal protein S18P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 87
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C I+YK +L F+++RGKI+ RI+ QR L I
Sbjct: 3 FKKRFTPRRKFCRFCADKDLPINYKRPDILRDFVTERGKIIARRITGTCAHHQRLLTTEI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTS 75
>gi|303326563|ref|ZP_07357006.1| ribosomal protein S18 [Desulfovibrio sp. 3_1_syn3]
gi|302864479|gb|EFL87410.1| ribosomal protein S18 [Desulfovibrio sp. 3_1_syn3]
Length = 87
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKELPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|157822015|ref|NP_001099466.1| 28S ribosomal protein S18c, mitochondrial [Rattus norvegicus]
gi|149046775|gb|EDL99549.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 143
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 64 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGF 120
Query: 78 I 78
+
Sbjct: 121 M 121
>gi|303287114|ref|XP_003062846.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455482|gb|EEH52785.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 92
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+D++D+++L+ F++ G+I+P R + V K QR++ +AIK AR + ++ +
Sbjct: 32 LDFRDVKVLSNFVTDTGRIIPRRKTGVRQKVQRKMNRAIKTARQMAIMPF 81
>gi|120406962|ref|YP_956791.1| 30S ribosomal protein S18 [Mycobacterium vanbaalenii PYR-1]
gi|205556618|sp|A1THY5|RS182_MYCVP RecName: Full=30S ribosomal protein S18 2
gi|119959780|gb|ABM16785.1| SSU ribosomal protein S18P [Mycobacterium vanbaalenii PYR-1]
Length = 87
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C GK IDYKD +LL ++S+RGKI R++ + QR++A A+K AR + L+ +
Sbjct: 24 CSKKGKNQD-IDYKDTQLLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVALLPF 82
>gi|225704940|gb|ACO08316.1| 28S ribosomal protein S18c, mitochondrial precursor [Oncorhynchus
mykiss]
Length = 102
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 4 VAPTPLLRRN-VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKK 61
++P PL N ++ C L +D+K+++LL++F+S G++ I+ + KK
Sbjct: 7 LSPQPLQMENPYKQPQEGCILCNV---TVDFKNVQLLSQFISPHTGRVYGRHITGLCGKK 63
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QRE+AKAIK+A +G ++ +
Sbjct: 64 QREIAKAIKKAHSMGFMSVTH 84
>gi|309322241|ref|YP_003934319.1| ribosomal protein S18 [Monsonia speciosa]
gi|300069334|gb|ADJ66454.1| ribosomal protein S18 [Monsonia speciosa]
Length = 174
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 39/51 (76%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I+Y++I L+++F+SQ GKI+ +++ V+ K+QR L AIK+AR L L+ +
Sbjct: 33 KINYRNISLISQFISQEGKILSRKVNRVTLKQQRLLTIAIKQARILSLLPF 83
>gi|197131552|gb|ACH47294.1| ribosomal protein S18 [Monsonia speciosa]
Length = 174
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 39/51 (76%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I+Y++I L+++F+SQ GKI+ +++ V+ K+QR L AIK+AR L L+ +
Sbjct: 33 KINYRNISLISQFISQEGKILSRKVNRVTLKQQRLLTIAIKQARILSLLPF 83
>gi|205620396|sp|Q7UFN3|RS18_RHOBA RecName: Full=30S ribosomal protein S18
Length = 87
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 35 VDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 86
>gi|283794886|ref|YP_003359239.1| ribosomal protein S18 [Cryptomonas paramecium]
gi|253981858|gb|ACT46775.1| ribosomal protein S18 [Cryptomonas paramecium]
Length = 69
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
I Y+ LL FL+ +GKIVP +S V+ K+QR+++KAIK AR L ++
Sbjct: 18 ISYRSFELLVSFLTSQGKIVPRSVSRVTLKQQRKISKAIKTARSLKVLV 66
>gi|32475377|ref|NP_868371.1| 30S ribosomal protein S18 [Rhodopirellula baltica SH 1]
gi|32445918|emb|CAD78649.1| 30S ribosomal protein S18 [Rhodopirellula baltica SH 1]
Length = 55
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 3 VDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 54
>gi|212704876|ref|ZP_03313004.1| hypothetical protein DESPIG_02943 [Desulfovibrio piger ATCC
29098]
gi|212671718|gb|EEB32201.1| hypothetical protein DESPIG_02943 [Desulfovibrio piger ATCC
29098]
Length = 87
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKDLPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|268679496|ref|YP_003303927.1| ribosomal protein S18 [Sulfurospirillum deleyianum DSM 6946]
gi|268617527|gb|ACZ11892.1| ribosomal protein S18 [Sulfurospirillum deleyianum DSM 6946]
Length = 88
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RK C IDYKD ++L LS+R KI+P R++ + Q + AIKRAR +
Sbjct: 9 RKYCKYCEAKVEYIDYKDAKILRHSLSERYKIMPRRLTGNCKRHQEMVELAIKRARATAV 68
Query: 78 IAYV 81
I Y+
Sbjct: 69 IPYI 72
>gi|297710087|ref|XP_002831737.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pongo
abelii]
Length = 141
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L GK ++YK+ +LL++F+S G I I+ + KK
Sbjct: 47 EDLPTPM-ENPYKESLKKCILCGK---HVNYKNAQLLSQFVSPFTGCIYGRHITGLCGKK 102
Query: 62 QRELAKAIKRARYLGLI 78
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFM 119
>gi|149046776|gb|EDL99550.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 89
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 10 KKCVLCEK---RVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGF 66
Query: 78 I 78
+
Sbjct: 67 M 67
>gi|87311126|ref|ZP_01093250.1| 30S ribosomal protein S18 [Blastopirellula marina DSM 3645]
gi|87286217|gb|EAQ78127.1| 30S ribosomal protein S18 [Blastopirellula marina DSM 3645]
Length = 89
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL + ++ G+IV R S + Q + +AIKRAR++ L+ YV
Sbjct: 37 VDYKDVELLKKLTNRHGRIVGRRKSGCTAVSQHAVTQAIKRARFMALLPYV 87
>gi|326509005|dbj|BAJ86895.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522312|dbj|BAK07618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L+ FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 172 KADFRNVRFLSNFLTEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 225
>gi|326517348|dbj|BAK00041.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L+ FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 177 KADFRNVRFLSNFLTEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 230
>gi|220905285|ref|YP_002480597.1| 30S ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254765423|sp|B8J3A9|RS18_DESDA RecName: Full=30S ribosomal protein S18
gi|219869584|gb|ACL49919.1| ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 87
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKDLPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|310118118|ref|XP_003120355.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
Length = 141
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L GK ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPM-ENPYKESLKKCVLCGK---HVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLI 78
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFM 119
>gi|60117173|ref|YP_209507.1| ribosomal protein S18 [Huperzia lucidula]
gi|62287393|sp|Q5SD37|RR18_HUPLU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50659981|gb|AAT80703.1| ribosomal protein S18 [Huperzia lucidula]
Length = 81
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + I+Y++I LL RF+S++GKI+ R++ ++ K+QR + AIKRAR
Sbjct: 7 SFRRRLPPI--RSGETINYRNISLLRRFISEQGKILSRRMNRLTSKQQRLITVAIKRARI 64
Query: 75 LGLIAYVN 82
++N
Sbjct: 65 SAPSPFLN 72
>gi|84998800|ref|XP_954121.1| hypothetical protein [Theileria annulata]
gi|65305119|emb|CAI73444.1| hypothetical protein, conserved [Theileria annulata]
Length = 348
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R K L+ P + D+ +L+ F+S+ G+I+P RI+ + K+Q ++ KAIK AR L
Sbjct: 254 RNKRLILNNNNKP-FSFHDLHVLHNFISEDGQILPRRINMTTRKQQIQIFKAIKIARNLA 312
Query: 77 LIAYVN 82
L Y N
Sbjct: 313 LFPYNN 318
>gi|283779507|ref|YP_003370262.1| 30S ribosomal protein S18 [Pirellula staleyi DSM 6068]
gi|283437960|gb|ADB16402.1| ribosomal protein S18 [Pirellula staleyi DSM 6068]
Length = 95
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL + +++ GKIV R + + Q ++ AIKRAR++ L+ YV
Sbjct: 43 VDYKDLELLKKLINRHGKIVNRRKTGCTAVSQHAVSLAIKRARFMALLPYV 93
>gi|114688759|ref|XP_001146698.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pan
troglodytes]
Length = 141
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L GK ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPM-ENPYKESLKKCVLCGK---HVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLI 78
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFM 119
>gi|15605661|ref|NP_213036.1| ribosomal protein S18 [Aquifex aeolicus VF5]
gi|7388147|sp|O66476|RS18_AQUAE RecName: Full=30S ribosomal protein S18
gi|2982823|gb|AAC06446.1| ribosomal protein S18 [Aquifex aeolicus VF5]
Length = 72
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYK+ L FL++RG+I + + + K QR LA IKRAR LGL+ YV
Sbjct: 21 DYKNYEELRNFLTERGRIKDRKQTGLCAKHQRRLAVQIKRARQLGLLPYV 70
>gi|145221470|ref|YP_001132148.1| 30S ribosomal protein S18 [Mycobacterium gilvum PYR-GCK]
gi|315446778|ref|YP_004079657.1| 30S ribosomal protein S18P [Mycobacterium sp. Spyr1]
gi|205556373|sp|A4T4N9|RS181_MYCGI RecName: Full=30S ribosomal protein S18 1
gi|145213956|gb|ABP43360.1| SSU ribosomal protein S18P [Mycobacterium gilvum PYR-GCK]
gi|315265081|gb|ADU01823.1| SSU ribosomal protein S18P [Mycobacterium sp. Spyr1]
Length = 88
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 18 RKSCPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RK S KG + IDYKD +LL ++S+RGKI R++ + QR++A A+K AR +
Sbjct: 20 RKCVFCSKKGKNQVIDYKDTQLLRTYISERGKIRARRVTGNCVQHQRDIAIAVKNAREVA 79
Query: 77 LIAY 80
L+ +
Sbjct: 80 LLPF 83
>gi|254443921|ref|ZP_05057397.1| ribosomal protein S18 [Verrucomicrobiae bacterium DG1235]
gi|198258229|gb|EDY82537.1| ribosomal protein S18 [Verrucomicrobiae bacterium DG1235]
Length = 49
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 37/48 (77%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+D+ +L R++++ GKI+P++++ ++ K+QR++ KAIKRAR L L+
Sbjct: 1 MDFHHAHILARYVTETGKIIPAKMNRINAKQQRKITKAIKRARNLRLM 48
>gi|239746839|ref|XP_002344238.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
gi|310133155|ref|XP_003121079.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
Length = 141
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L GK ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPM-ENPYKESLKKCVLCGK---HVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLI 78
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFM 119
>gi|295136932|ref|YP_003587765.1| ribosomal protein S18 [Lathyrus sativus]
gi|293338654|gb|ADE43626.1| ribosomal protein S18 [Lathyrus sativus]
Length = 127
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
RIDYK++ LL + +++ GKI+ R++ ++ K+QR + AIK+AR L L+ +
Sbjct: 37 RIDYKNLSLLFKLVTREGKILSRRVNKLTLKQQRWITIAIKQARILSLLPF 87
>gi|196000654|ref|XP_002110195.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
gi|190588319|gb|EDV28361.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
Length = 127
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ YKD+ LL +F+S G+I R + + K+ R++ KAIKR+R GL+
Sbjct: 52 CPICRNNIKNFGYKDVLLLKQFISDEGRIYGKRKTGLCAKQHRKVLKAIKRSRAEGLL 109
>gi|323148839|ref|YP_004221932.1| ribosomal protein S18 [Erodium carvifolium]
gi|316926303|gb|ADU58156.1| ribosomal protein S18 [Erodium carvifolium]
Length = 106
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 41/55 (74%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+ +I Y++I L++RF+S++G+I+ R++ ++ K+QR L+ AIK+AR L +A+
Sbjct: 22 QQGDQIHYRNISLISRFISKQGQILSRRVTRLTLKQQRLLSIAIKQARILSSLAF 76
>gi|307128656|ref|YP_003880686.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri CARI]
gi|306483118|gb|ADM89988.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri CARI]
Length = 393
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ ++K C +D+K+ L +FL++R +I+P RI+ S K QR++ A+KR +
Sbjct: 320 LKEKKKYCFFKKANIGYVDFKNPLFLIKFLNERAEILPRRITGTSKKFQRKIKIAVKRCK 379
Query: 74 YLGLIAYVN 82
+GL+ Y+
Sbjct: 380 QIGLLPYLT 388
>gi|221222110|gb|ACM09716.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 138
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+D+K+++LL++F+S G+I I+ + KKQRE+ KAIK+A +G ++
Sbjct: 68 VDFKNVQLLSQFISPHTGRIYGRHITGLCGKKQREIGKAIKKAHSMGFMS 117
>gi|221220090|gb|ACM08706.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 132
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+D+K+++LL++F+S G+I I+ + KKQRE+ KAIK+A +G ++
Sbjct: 62 VDFKNVQLLSQFISPHTGRIYGRHITGLCGKKQREIGKAIKKAHSMGFMS 111
>gi|156598022|gb|ABU85277.1| ribosomal protein S18 [Cycas micronesica]
Length = 72
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + +ID+K++ +++F+S+RGKI+ R+S ++ K+QR + AIKRAR
Sbjct: 5 SFRRRLPPIGSRD--QIDHKNMSSISQFISERGKILSGRVSRLTPKQQRLMTIAIKRARI 62
Query: 75 LGLIAYVN 82
++N
Sbjct: 63 PSSSPFLN 70
>gi|150251496|ref|YP_001312229.1| ribosomal protein S18 [Cycas taitungensis]
gi|205831388|sp|A6H5K4|RR18_CYCTA RecName: Full=Chloroplast 30S ribosomal protein S18
gi|149941546|dbj|BAF64970.1| ribosomal protein S18 [Cycas taitungensis]
Length = 75
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ + +ID+K++ +++F+S+RGKI+ R+S ++ K+QR + AIKRAR
Sbjct: 7 SFRRRLPPIGSRD--QIDHKNMSSISQFISERGKILSGRVSRLTPKQQRLMTIAIKRARI 64
Query: 75 LGLIAYVN 82
++N
Sbjct: 65 PSSSPFLN 72
>gi|297843510|ref|XP_002889636.1| 30S ribosomal protein S18 family [Arabidopsis lyrata subsp. lyrata]
gi|297335478|gb|EFH65895.1| 30S ribosomal protein S18 family [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
D++++R L +F+++ G I+ + + +S K QR++A+ IK AR GL+ + +
Sbjct: 176 DFRNVRFLAKFITEAGIIIKRKQTGISAKAQRKIAREIKTARAFGLMPFTTM 227
>gi|152992022|ref|YP_001357743.1| 30S ribosomal protein S18 [Sulfurovum sp. NBC37-1]
gi|166222250|sp|A6Q7C7|RS18_SULNB RecName: Full=30S ribosomal protein S18
gi|151423883|dbj|BAF71386.1| 30S ribosomal protein S18 [Sulfurovum sp. NBC37-1]
Length = 87
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+++ C + IDYKD+ L LS+R KI+P R++ + Q + AIKRAR
Sbjct: 8 KKRFCKYCEQKVDFIDYKDLNSLKFSLSERFKIMPRRLTGNCKRHQEMVTVAIKRARQTA 67
Query: 77 LIAYV 81
LI Y+
Sbjct: 68 LIPYI 72
>gi|288817693|ref|YP_003432040.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
gi|288787092|dbj|BAI68839.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
gi|308751291|gb|ADO44774.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
Length = 72
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
YK+ L +F+++RGKI+ R + V K QR L++ IKRAR L L+ Y+
Sbjct: 22 YKNYEELRQFMTERGKIIGRRQTGVCAKHQRMLSREIKRARQLALLPYL 70
>gi|312066944|ref|XP_003136510.1| hypothetical protein LOAG_00922 [Loa loa]
gi|307768324|gb|EFO27558.1| hypothetical protein LOAG_00922 [Loa loa]
Length = 194
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + H ++C L P +I Y D+ +L +F+ + G ++P +++ + K+QR + + +
Sbjct: 72 RKVLKHSPETCTLCTCNVPVKIRYSDVLILEQFMRKDGTVLPQQLTGLCKKQQRRIERCV 131
Query: 70 KRARYLGLI 78
+A + GL
Sbjct: 132 MQAHWAGLF 140
>gi|57340086|gb|AAW50030.1| hypothetical protein FTT1061 [synthetic construct]
Length = 80
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
RRK C + +G IDYKD+ L ++++ GKIVPSR++
Sbjct: 29 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVT 67
>gi|320102574|ref|YP_004178165.1| 30S ribosomal protein S18P [Isosphaera pallida ATCC 43644]
gi|319749856|gb|ADV61616.1| SSU ribosomal protein S18P [Isosphaera pallida ATCC 43644]
Length = 80
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 12 RNVSHRRKSCPLSGKGAPR---IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RN +R + C + +G PR +DYKD+ LL + + + K+ + S QR + A
Sbjct: 8 RNRKNRCRFC--TAQGCPRPAYVDYKDVGLLKKLCTNQSKMFSRKRSGNCAAFQRAASLA 65
Query: 69 IKRARYLGLIAYV 81
IKRAR+L L+ YV
Sbjct: 66 IKRARFLALMPYV 78
>gi|321309535|ref|YP_004191864.1| 30S ribosomal protein S18 [Mycoplasma haemofelis str. Langford 1]
gi|319801379|emb|CBY92025.1| ribosomal protein S18 [Mycoplasma haemofelis str. Langford 1]
Length = 94
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C L G IDYK+ L R+L + KI+ +I+ + Q ++A AIKRAR + L+ +
Sbjct: 33 CWLCKWGCLHIDYKNTDFLKRYL-KNNKIITHKITGNCLRHQHQIAFAIKRARVVALLPF 91
Query: 81 V 81
V
Sbjct: 92 V 92
>gi|239907339|ref|YP_002954080.1| 30S ribosomal protein S18 [Desulfovibrio magneticus RS-1]
gi|259494807|sp|C4XGN6|RS18_DESMR RecName: Full=30S ribosomal protein S18
gi|239797205|dbj|BAH76194.1| 30S ribosomal protein S18 [Desulfovibrio magneticus RS-1]
Length = 85
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ K P +DYK +L F++ RGKI+ RI+ K QR L IKRAR + L+ Y
Sbjct: 18 ANKNLP-VDYKRPDILKDFITDRGKIIARRITGTCAKCQRRLTLEIKRARQMALLYYT 74
>gi|326383105|ref|ZP_08204794.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
gi|326198241|gb|EGD55426.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
Length = 63
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
DYKD L RFL+ RG+I ++ +S ++QR LA AI+ AR + L+
Sbjct: 15 FDYKDTETLRRFLTDRGRIRKRSVTGLSVQQQRRLATAIRNAREMALL 62
>gi|303249180|ref|ZP_07335418.1| ribosomal protein S18 [Desulfovibrio fructosovorans JJ]
gi|302489403|gb|EFL49352.1| ribosomal protein S18 [Desulfovibrio fructosovorans JJ]
Length = 85
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ K P +DYK +L F++ RGKI+ RI+ K QR L IKRAR + L+ Y
Sbjct: 18 ANKNLP-VDYKRPDILKDFVTDRGKIIARRITGTCAKCQRRLTVEIKRARQMALLYYT 74
>gi|283850177|ref|ZP_06367466.1| ribosomal protein S18 [Desulfovibrio sp. FW1012B]
gi|283574203|gb|EFC22174.1| ribosomal protein S18 [Desulfovibrio sp. FW1012B]
Length = 85
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ K P +DYK +L F++ RGKI+ RI+ K QR+L IKRAR + ++ Y
Sbjct: 18 ANKNLP-VDYKRPDILKDFVTDRGKIIARRITGTCAKCQRKLTLEIKRARQMAMLYYT 74
>gi|226533445|ref|NP_001142148.1| hypothetical protein LOC100274313 [Zea mays]
gi|194707354|gb|ACF87761.1| unknown [Zea mays]
Length = 306
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK AR G
Sbjct: 196 RRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIAREIKTARAFG 255
Query: 77 LIAYVNL 83
L+ + +
Sbjct: 256 LMPFTTM 262
>gi|313635426|gb|EFS01683.1| 30S ribosomal protein S18 [Listeria seeligeri FSL N1-067]
Length = 45
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVP 51
+K C + G IDYKD+ LL +F+S+RGKI+P
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKILP 45
>gi|125532533|gb|EAY79098.1| hypothetical protein OsI_34205 [Oryza sativa Indica Group]
Length = 274
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 169 KADFRNVRFLANFLTEAGIIIKRSQTCISAKAQRKVAREIKTARALGLLPFTTM 222
>gi|15222340|ref|NP_172201.1| 30S ribosomal protein S18 family [Arabidopsis thaliana]
gi|8954025|gb|AAF82199.1|AC067971_7 Contains similarity to a ribosomal protein S18 - Chlamydomonas
reinhardtii chloroplast (fragment) from Chlamydomonas
reinhardtii gb|Y16473. It contains a ribosomal protein
S18 domain PF|01084. EST gb|AI997380 comes from this
gene [Arabidopsis thaliana]
gi|12083224|gb|AAG48771.1|AF332408_1 unknown protein [Arabidopsis thaliana]
gi|110737014|dbj|BAF00462.1| hypothetical protein [Arabidopsis thaliana]
gi|332189972|gb|AEE28093.1| Ribosomal protein S18 [Arabidopsis thaliana]
Length = 261
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
D++++R L F+++ G I+ + + +S K QR++A+ IK AR GL+ + +
Sbjct: 176 DFRNVRFLANFITEAGIIIKRKQTGISAKAQRKIAREIKTARAFGLMPFTTM 227
>gi|115482774|ref|NP_001064980.1| Os10g0500500 [Oryza sativa Japonica Group]
gi|22165064|gb|AAM93681.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|31432894|gb|AAP54470.1| ribosomal protein S18 containing protein, expressed [Oryza sativa
Japonica Group]
gi|113639589|dbj|BAF26894.1| Os10g0500500 [Oryza sativa Japonica Group]
Length = 274
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 169 KADFRNVRFLANFLTEAGIIIKRSQTRISAKAQRKVAREIKTARALGLLPFTTM 222
>gi|301113826|ref|XP_002998683.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111984|gb|EEY70036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 314
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
D+ LL F+S G+I P R + ++ K+QR+LA+AIK +R + L+ Y++
Sbjct: 221 DVDLLRLFISPTGRIRPRRFTGLTAKQQRKLAQAIKISRQMALLPYLS 268
>gi|195620404|gb|ACG32032.1| ribosomal protein S18 containing protein [Zea mays]
Length = 290
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK AR G
Sbjct: 180 RRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIAREIKTARAFG 239
Query: 77 LIAYVNL 83
L+ + +
Sbjct: 240 LMPFTTM 246
>gi|321477833|gb|EFX88791.1| hypothetical protein DAPPUDRAFT_41774 [Daphnia pulex]
Length = 178
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+R+++ CP+ +DY+++ LL +F+S G I+P+ + + KQREL A
Sbjct: 92 IRQDMLATGNPCPICRDEYLILDYRNVELLKQFISPFNGAILPTEKTGLCQTKQRELLVA 151
Query: 69 IKRARYLGLIAY 80
I +A+ GLI +
Sbjct: 152 ILKAKDYGLITF 163
>gi|332254445|ref|XP_003276340.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Nomascus
leucogenys]
Length = 154
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L GK ++YK+ +LL++F+S G I I+ + KK
Sbjct: 60 EDLPTPM-ENPYKESLKKCILRGK---HVNYKNAQLLSQFVSPFTGCIYGRHITGLCGKK 115
Query: 62 QRELAKAIKRARYLGLI 78
Q+E+ KAIKRA+ G +
Sbjct: 116 QKEITKAIKRAQITGFM 132
>gi|197131554|gb|ACH47295.1| ribosomal protein S18 [Sarcocaulon vanderietiae]
Length = 221
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I Y++I L++RF+SQ G+I+ +++ V+ K+QR L AIK+AR L L+ +
Sbjct: 42 KIHYRNISLISRFISQHGQILSRKVNRVTLKQQRLLTIAIKQARILYLVPF 92
>gi|197131542|gb|ACH47289.1| ribosomal protein S18 [Erodium chrysanthum]
Length = 111
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRI-SSVSHKKQRELAKAIKRARYLGLIAY 80
+I Y +I L++RF+SQ+GKI+ R+ ++ ++QR LA AIK+AR L L+ +
Sbjct: 30 KIHYTNISLISRFISQQGKILSRRVKKGLTLQQQRRLAIAIKQARILSLLPF 81
>gi|125575298|gb|EAZ16582.1| hypothetical protein OsJ_32054 [Oryza sativa Japonica Group]
Length = 220
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 115 KADFRNVRFLANFLTEAGIIIKRSQTRISAKAQRKVAREIKTARALGLLPFTTM 168
>gi|47210459|emb|CAF94328.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+DYK+I+LL++F+S GKI + + KQ+++AKAIK+A+ +G ++
Sbjct: 60 VDYKNIQLLSQFISPHTGKIYGRHFTGLCGVKQKQVAKAIKKAQSMGFMS 109
>gi|326489416|dbj|BAK01689.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520481|dbj|BAK07499.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527755|dbj|BAK08152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L F+++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 187 KADFRNVRFLANFITEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 240
>gi|212275284|ref|NP_001130172.1| hypothetical protein LOC100191266 [Zea mays]
gi|194688464|gb|ACF78316.1| unknown [Zea mays]
Length = 180
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK AR G
Sbjct: 70 RRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIAREIKTARAFG 129
Query: 77 LIAYVNL 83
L+ + +
Sbjct: 130 LMPFTTM 136
>gi|296140975|ref|YP_003648218.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
gi|296029109|gb|ADG79879.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
Length = 79
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK++ L FL++RGK+ ++ +S + QR LA A+K AR + L+ Y
Sbjct: 26 LDYKNVTYLRTFLNERGKLRSRAVTRLSPQDQRALALAVKNAREMALLPYAT 77
>gi|257042646|gb|ACV32916.1| ribosomal protein S18 [Pinus monticola]
Length = 93
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR P+ + RIDYK++ L++RF+S++GKI+ R AIKRAR L
Sbjct: 27 RRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSXRXXXXXXXXXXXXTNAIKRARILS 84
Query: 77 LIAYV 81
L+ ++
Sbjct: 85 LLPFL 89
>gi|225434578|ref|XP_002279055.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1200
Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L F+++ G I+ + +S K QR++A+ IK AR GL+ + +
Sbjct: 129 KADFRNVRFLAHFITEAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTM 182
>gi|317134117|ref|YP_004123447.1| ribosomal protein S18 [Rhizanthella gardneri]
gi|255985048|gb|ACU46595.1| ribosomal protein S18 [Rhizanthella gardneri]
Length = 89
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N S R+ P+ G G +IDYK++ L+++F+S++G+I+ R + + K+QR + AIK+A
Sbjct: 12 NRSISRRLLPI-GPGD-QIDYKNMSLISQFISEQGRILSRRANKLPLKQQRFITIAIKQA 69
Query: 73 RYLGLIAYV 81
R L L+ +
Sbjct: 70 RILSLLPFF 78
>gi|294462182|gb|ADE76643.1| unknown [Picea sitchensis]
Length = 340
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+G+ + D++++R L F+++ G + P + + K QR++A+ IK AR GL+ + ++
Sbjct: 224 TGEVLRKADFRNVRFLQNFITEAGILYPRKKFGIRAKAQRKIAREIKTARAFGLMPFTSM 283
>gi|296121128|ref|YP_003628906.1| ribosomal protein S18 [Planctomyces limnophilus DSM 3776]
gi|296013468|gb|ADG66707.1| ribosomal protein S18 [Planctomyces limnophilus DSM 3776]
Length = 94
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 21 CPLSGKGAPR---IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP PR +DYKD++ L + + G ++ R + K QR + A+ RAR++GL
Sbjct: 28 CPDGCDKPPRPIFVDYKDLKTLRAMIDREGNLLARRKTGTCVKYQRVVRDAVLRARFMGL 87
Query: 78 IAYV 81
+ YV
Sbjct: 88 LPYV 91
>gi|242034559|ref|XP_002464674.1| hypothetical protein SORBIDRAFT_01g023140 [Sorghum bicolor]
gi|241918528|gb|EER91672.1| hypothetical protein SORBIDRAFT_01g023140 [Sorghum bicolor]
Length = 310
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 23/97 (23%)
Query: 10 LRRNVSHRRKSC----------PLSGKGAPR-------------IDYKDIRLLNRFLSQR 46
R +V++RR S P + K PR D++++R L+ FL++
Sbjct: 169 FRPDVTYRRGSTYSVRDLDLTRPAAAKNPPRPQFETTTAEVLRKADFRNVRFLSHFLTEA 228
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
G I+ + +S K QR++A+ IK AR GL+ + +
Sbjct: 229 GIIIKRSQTRISAKAQRKIAREIKTARAFGLMPFTTM 265
>gi|89266949|emb|CAJ83647.1| novel protein similar to mitochondrial ribosomal protein S18C
[Xenopus (Silurana) tropicalis]
Length = 131
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +DYK+ +LL++F+S G I I+ + +KQR ++KAIKRA +G
Sbjct: 56 KKCILCGV---TVDYKNTQLLSQFISPHTGHIFGRHITGLCGRKQRAVSKAIKRAHIMGF 112
Query: 78 I 78
+
Sbjct: 113 M 113
>gi|62859095|ref|NP_001017092.1| mitochondrial ribosomal protein S18C [Xenopus (Silurana)
tropicalis]
Length = 125
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +DYK+ +LL++F+S G I I+ + +KQR ++KAIKRA +G
Sbjct: 50 KKCILCGV---TVDYKNTQLLSQFISPHTGHIFGRHITGLCGRKQRAVSKAIKRAHIMGF 106
Query: 78 I 78
+
Sbjct: 107 M 107
>gi|241566254|ref|XP_002402126.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
gi|215499986|gb|EEC09480.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
Length = 171
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
H +CPL G + Y D+ +L++F+ +G ++P+ ++ + K+ R + + + A+
Sbjct: 65 HNTSACPLCRVGLTNLKYTDVLILSQFVDSKGNLLPTSVTGLCLKQHRLVGRLVYEAQRT 124
Query: 76 GLI 78
GL+
Sbjct: 125 GLM 127
>gi|297295998|ref|XP_002804733.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Macaca
mulatta]
Length = 144
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L GK +D+K+++LL++F+S G I + + KKQ+E+ KAIKR + +GL
Sbjct: 65 KKCILCGK---HVDFKNVQLLSQFISPFIGCICGRHKTGLCGKKQKEITKAIKRPQIIGL 121
Query: 78 I 78
+
Sbjct: 122 M 122
>gi|148540187|ref|NP_001038655.2| 28S ribosomal protein S18c, mitochondrial [Danio rerio]
gi|133778758|gb|AAI34081.1| Mrps18c protein [Danio rerio]
Length = 136
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+D+K+++LL++F+S G+I I+ + +KQ+E+ KAIK++R +G ++
Sbjct: 66 VDFKNVQLLSQFISPHTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMS 115
>gi|94733802|emb|CAK05014.1| novel protein similar to vertebrate mitochondrial ribosomal protein
S18C (MRPS18C) [Danio rerio]
Length = 136
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 31 IDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+D+K+++LL++F+S G+I I+ + +KQ+E+ KAIK++R +G ++
Sbjct: 66 VDFKNVQLLSQFISPHTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMS 115
>gi|213409251|ref|XP_002175396.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
japonicus yFS275]
gi|212003443|gb|EEB09103.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
japonicus yFS275]
Length = 159
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R RR + P + G +DY K+ +L+ +L++ G+I ++ +S K QR+L +AI
Sbjct: 88 RNEFRQRRPADPFTALGKSPLDYWKNPVVLSEYLTELGRIKHRAVTGLSAKHQRQLTRAI 147
Query: 70 KRARYLGLI 78
KRAR G++
Sbjct: 148 KRARATGVL 156
>gi|307176792|gb|EFN66189.1| 28S ribosomal protein S18c, mitochondrial [Camponotus floridanus]
Length = 146
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 32 DYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
DYK++RLL++F SQ G+I S I+ + KQ++L + I +AR GL+ +
Sbjct: 72 DYKNVRLLSQFQSQHTGRIYESHITGLCKYKQKKLEEEINKARSAGLMGF 121
>gi|254565685|ref|XP_002489953.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|238029749|emb|CAY67672.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|328350364|emb|CCA36764.1| 37S ribosomal protein rsm18, mitochondrial [Pichia pastoris CBS
7435]
Length = 151
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 36/45 (80%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+L+R+L+ G+I+ ++ +S+K+QR L+KAIKRAR GL+++V+
Sbjct: 96 ILSRYLTTGGRILHKDVTGLSNKQQRLLSKAIKRARAAGLLSHVS 140
>gi|168704562|ref|ZP_02736839.1| hypothetical protein GobsU_33809 [Gemmata obscuriglobus UQM 2246]
Length = 87
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +FL+ + K++ + S +S QR LA A+KRAR++GL+ YV
Sbjct: 35 IDYKDVNGLRKFLTSQAKLMSRKRSGLSAGAQRALAAAVKRARFMGLLPYVG 86
>gi|294055967|ref|YP_003549625.1| ribosomal protein S18 [Coraliomargarita akajimensis DSM 45221]
gi|293615300|gb|ADE55455.1| ribosomal protein S18 [Coraliomargarita akajimensis DSM 45221]
Length = 65
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
Y D+ L+RF+++ GKI+P +++ +S K QR + IKRAR +
Sbjct: 19 YLDVEQLSRFVTETGKILPRKVTGLSAKHQRRVTNQIKRARNM 61
>gi|189219027|ref|YP_001939668.1| ribosomal protein S18 [Methylacidiphilum infernorum V4]
gi|189185885|gb|ACD83070.1| Ribosomal protein S18 [Methylacidiphilum infernorum V4]
Length = 83
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
A ID++++ LL R++++ G+I+P RI+ + K R L+K IK+AR + L+
Sbjct: 32 AEAIDFRNVELLKRYVTENGRILPRRITGLPAKLHRLLSKEIKKARNVLLM 82
>gi|309322078|ref|YP_003933895.1| ribosomal protein S18 [Erodium texanum]
gi|300069171|gb|ADJ66293.1| ribosomal protein S18 [Erodium texanum]
Length = 175
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 37/50 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++YK++ ++++F+S++GKI+P + + KKQ + +A+K+AR L L+ +
Sbjct: 32 LNYKNVSVISQFISKQGKILPRWVKGLKKKKQDLVKRAVKQARLLALLYF 81
>gi|197131544|gb|ACH47290.1| ribosomal protein S18 [Erodium texanum]
Length = 175
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 37/50 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++YK++ ++++F+S++GKI+P + + KKQ + +A+K+AR L L+ +
Sbjct: 32 LNYKNVSVISQFISKQGKILPRWVKGLKKKKQDLVKRAVKQARLLALLYF 81
>gi|66508635|ref|XP_623794.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Apis mellifera]
Length = 158
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+CP+ G I + D+ +LN+F+ G I+P RI+ + +Q+ ++ I+ A+Y GL+
Sbjct: 66 ACPICSSGL-NIKHTDVLILNQFVRSDGCILPRRITGLCEIQQKRISSLIQMAQYAGLM 123
>gi|313611730|gb|EFR86267.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL F2-208]
Length = 44
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIV 50
+K C + G IDYKD+ LL +F+S+RGKI+
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKIL 44
>gi|242053025|ref|XP_002455658.1| hypothetical protein SORBIDRAFT_03g017560 [Sorghum bicolor]
gi|241927633|gb|EES00778.1| hypothetical protein SORBIDRAFT_03g017560 [Sorghum bicolor]
Length = 104
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 3 LINRFISEQGKILSRRINRLTLKQQRLITVAIKQARILSFLPFRN 47
>gi|330930011|ref|XP_003302852.1| hypothetical protein PTT_14836 [Pyrenophora teres f. teres 0-1]
gi|311321480|gb|EFQ89028.1| hypothetical protein PTT_14836 [Pyrenophora teres f. teres 0-1]
Length = 207
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 38/54 (70%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
P ++YK+ +++ ++++ G+I S+ + + K QR++AKAI+RA LGL+ V+
Sbjct: 139 PVLEYKNFTMMSEYMTEMGRIKHSKDTGLRPKNQRKIAKAIRRAVGLGLMPSVH 192
>gi|171914513|ref|ZP_02929983.1| 30S ribosomal protein S18 [Verrucomicrobium spinosum DSM 4136]
Length = 79
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RR P+ +++YK +L +F ++ GKI+P R++ VS R + + IKR
Sbjct: 17 RKLPRRRMDIPMD-----KLNYKHPEILAKFATETGKILPRRVTGVSAYVHRTITREIKR 71
Query: 72 ARYLGLI 78
AR L L+
Sbjct: 72 ARSLNLM 78
>gi|309263593|ref|XP_003086086.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Mus
musculus]
gi|309270891|ref|XP_003085170.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Mus
musculus]
Length = 152
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L K +DYK+++LL++F+S G I I+ + KKQRE+ KA KR + +G
Sbjct: 73 KKCVLCEK---HVDYKNVQLLSQFISPFTGCIYRRHITGLCGKKQREITKATKRTQKMGF 129
Query: 78 I 78
+
Sbjct: 130 M 130
>gi|78777859|ref|YP_394174.1| 30S ribosomal protein S18 [Sulfurimonas denitrificans DSM 1251]
gi|123741081|sp|Q30PZ2|RS18_SULDN RecName: Full=30S ribosomal protein S18
gi|78498399|gb|ABB44939.1| SSU ribosomal protein S18P [Sulfurimonas denitrificans DSM 1251]
Length = 87
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++++ C +DYKD+ L LS+R KI+P R++ + Q +A IKRAR
Sbjct: 7 YKKRYCKYCEAKVDFMDYKDVGALRFSLSERYKIMPRRLTGNCKRHQDMIATVIKRARAA 66
Query: 76 GLIAYV 81
L+ Y
Sbjct: 67 ALVPYT 72
>gi|315273285|ref|ZP_07869271.1| 30S ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|315295661|ref|ZP_07872234.1| 30S ribosomal protein S18 [Listeria ivanovii FSL F6-596]
gi|313616097|gb|EFR89227.1| 30S ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|313630793|gb|EFR98530.1| 30S ribosomal protein S18 [Listeria ivanovii FSL F6-596]
Length = 43
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKI 49
+K C + G IDYKD+ LL +F+S+RGKI
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKI 43
>gi|50308299|ref|XP_454151.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643286|emb|CAG99238.1| KLLA0E04555p [Kluyveromyces lactis]
Length = 155
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
Y + L+RF++ GKI+ ++ +S K QR L KAIKR + +GL++ V+
Sbjct: 92 YTNPEFLSRFVTSTGKILHRDVTGLSAKNQRRLTKAIKRCQAIGLMSKVH 141
>gi|242039197|ref|XP_002466993.1| hypothetical protein SORBIDRAFT_01g018030 [Sorghum bicolor]
gi|241920847|gb|EER93991.1| hypothetical protein SORBIDRAFT_01g018030 [Sorghum bicolor]
Length = 310
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L+ FL++ G I+ + +S K QR++A+ IK AR GL+ + +
Sbjct: 212 KADFRNVRFLSHFLTEAGIIIKRSQTRISAKAQRKIAREIKTARAFGLMPFTTM 265
>gi|297745890|emb|CBI15946.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L F+++ G I+ + +S K QR++A+ IK AR GL+ + +
Sbjct: 230 KADFRNVRFLAHFITEAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTM 283
>gi|260947332|ref|XP_002617963.1| hypothetical protein CLUG_01422 [Clavispora lusitaniae ATCC 42720]
gi|238847835|gb|EEQ37299.1| hypothetical protein CLUG_01422 [Clavispora lusitaniae ATCC 42720]
Length = 198
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
Y +L+RF+S G+I+P ++ + K Q++L AIKRAR +GL++ +
Sbjct: 138 YSMPEILSRFVSSTGQILPREVTGCNAKNQKKLGIAIKRARSVGLLSTTH 187
>gi|163783217|ref|ZP_02178211.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881551|gb|EDP75061.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
Length = 73
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 17 RRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RR+ C K P DYK+ L +F++ R +I R + + +K Q+ LA IKRAR L
Sbjct: 8 RRRVCYYCENKKEP--DYKNYEELRQFMTDRARIKSRRQTGLCNKHQKRLALQIKRARQL 65
Query: 76 GLIAYV 81
L+ YV
Sbjct: 66 ALLPYV 71
>gi|260830511|ref|XP_002610204.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
gi|229295568|gb|EEN66214.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
Length = 201
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
V + +CP+ + +KD+ +L++F+ G+++P +++ V + + ++L AI+
Sbjct: 67 EEVDNPHGACPICSRNL-TFTWKDVHILSQFMRPDGQVMPQQVTGVCNTQHKKLFMAIEE 125
Query: 72 ARYLGLI 78
A+ GL
Sbjct: 126 AKQAGLF 132
>gi|328948105|ref|YP_004365442.1| 30S ribosomal protein S18 [Treponema succinifaciens DSM 2489]
gi|328448429|gb|AEB14145.1| 30S ribosomal protein S18 [Treponema succinifaciens DSM 2489]
Length = 104
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
SH++ + KG +IDYKD L RF ++RGKI+P RI+ + Q+E+A AIKRAR
Sbjct: 37 FSHKKVCRFCANKG--KIDYKDADGLRRFTTERGKILPRRITGTCSRHQKEVAAAIKRAR 94
Query: 74 YLGLIAYV 81
+ L+ +V
Sbjct: 95 AICLLPFV 102
>gi|189211187|ref|XP_001941924.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978017|gb|EDU44643.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 143
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 38/54 (70%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
P ++YK+ +++ ++++ G+I S+ + + K QR++AKAI+RA LGL+ V+
Sbjct: 75 PVLEYKNFTMMSEYMTEMGRIKHSKDTGLRPKNQRKIAKAIRRAVGLGLMPSVH 128
>gi|312221960|emb|CBY01900.1| hypothetical protein [Leptosphaeria maculans]
Length = 206
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 38/54 (70%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
P ++YK+ +++ ++++ G+I S+ + + K QR++AKAI+RA LGL+ V+
Sbjct: 138 PILEYKNFTIMSEYMTETGRIKHSKDTGLRPKNQRKIAKAIRRAIGLGLMPSVH 191
>gi|170033697|ref|XP_001844713.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
gi|167874681|gb|EDS38064.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
Length = 202
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D++++ LL +F+S Q GK++ I+ + +KQ EL AI RA GLI
Sbjct: 124 CPVCRDEYLVLDHQNVELLKQFVSPQTGKVLSYSITGLCQRKQLELKVAIDRAMDYGLIT 183
Query: 80 Y 80
+
Sbjct: 184 F 184
>gi|156087046|ref|XP_001610930.1| ribosomal protein S18 [Babesia bovis T2Bo]
gi|154798183|gb|EDO07362.1| ribosomal protein S18, putative [Babesia bovis]
Length = 336
Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 35/48 (72%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++D+ +L+ F+++ G+I+P R++ + ++QR++ +AI+ AR + L Y
Sbjct: 211 FRDLHVLHNFVAENGQILPRRLTYATRQQQRQIFRAIRVARQMALFPY 258
>gi|71894545|ref|YP_278653.1| 30S ribosomal protein S18 [Mycoplasma synoviae 53]
gi|123775422|sp|Q4A5M9|RS18_MYCS5 RecName: Full=30S ribosomal protein S18
gi|71851333|gb|AAZ43942.1| 30S ribosomal protein S18 [Mycoplasma synoviae 53]
Length = 111
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ +++++C +DYK++ L +F++ G I P + K QR++ A+K
Sbjct: 7 KKGYHNKKRTCHFCDNKLTYVDYKNVEDLKKFVNAVGSIKPKVATGNCAKHQRKVTLAVK 66
Query: 71 RARYLGLIAY 80
RAR + L+ +
Sbjct: 67 RARLMALLPF 76
>gi|302143651|emb|CBI22404.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 34/45 (75%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 155 LISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 199
>gi|148691308|gb|EDL23255.1| mitochondrial ribosomal protein S18B, isoform CRA_b [Mus musculus]
Length = 204
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 103 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLS 162
Query: 80 Y 80
Y
Sbjct: 163 Y 163
>gi|225718324|gb|ACO15008.1| 28S ribosomal protein S18b, mitochondrial precursor [Caligus
clemensi]
Length = 177
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ IDY++ RLL +F+ S G+I+ SR + V KK ++ AI++A+ GL+
Sbjct: 97 CPICRDIYLVIDYRNTRLLEQFIKSYNGEILSSRDTGVCRKKHFDILVAIEKAKLYGLLD 156
Query: 80 YVN 82
++
Sbjct: 157 SID 159
>gi|223940174|ref|ZP_03632036.1| ribosomal protein S18 [bacterium Ellin514]
gi|223891191|gb|EEF57690.1| ribosomal protein S18 [bacterium Ellin514]
Length = 87
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 34/48 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+D+K+ LL +F++ +G+I+P + + + QR+L ++IKRAR + L+
Sbjct: 39 LDFKNTNLLKQFVTDQGRILPRKYTGLPAHYQRQLNRSIKRARQMLLM 86
>gi|68491581|ref|XP_710420.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|68491604|ref|XP_710409.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|46431603|gb|EAK91147.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|46431615|gb|EAK91158.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
Length = 200
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRL----LNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
S ++ S P G ID K++ L L++FL+ G+I+P +++ + K Q+ L+ AI+
Sbjct: 121 STKKLSDPFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRQVTGCNAKNQKRLSMAIE 177
Query: 71 RARYLGLIA 79
AR LGL++
Sbjct: 178 YARSLGLLS 186
>gi|238879098|gb|EEQ42736.1| hypothetical protein CAWG_00957 [Candida albicans WO-1]
Length = 200
Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRL----LNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
S ++ S P G ID K++ L L++FL+ G+I+P +++ + K Q+ L+ AI+
Sbjct: 121 STKKLSDPFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRQVTGCNAKNQKRLSMAIE 177
Query: 71 RARYLGLIA 79
AR LGL++
Sbjct: 178 YARSLGLLS 186
>gi|302824491|ref|XP_002993888.1| hypothetical protein SELMODRAFT_9213 [Selaginella moellendorffii]
gi|300138255|gb|EFJ05029.1| hypothetical protein SELMODRAFT_9213 [Selaginella moellendorffii]
Length = 80
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+D+K+ L RFLS+RGKI+ +++ + K+QR + A KRAR L
Sbjct: 24 VDHKNTSLPRRFLSKRGKILSKQMNRSTSKQQRFMTTAAKRARISAL 70
>gi|296399224|gb|ADH10399.1| ribosomal protein S18 [Selaginella moellendorffii]
Length = 79
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 14 VSHRRKSCP-LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+S R++ P + G +D+K+ L RFLS+RGKI+ +++ + K+QR + A KRA
Sbjct: 6 LSSRKRLLPSVVGGLGETVDHKNTSLPRRFLSKRGKILSKQMNRSTSKQQRFMTTAAKRA 65
Query: 73 RYLGL 77
R L
Sbjct: 66 RISAL 70
>gi|23956152|ref|NP_080154.1| 28S ribosomal protein S18b, mitochondrial precursor [Mus musculus]
gi|24212195|sp|Q99N84|RT18B_MOUSE RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|13620909|dbj|BAB41007.1| mitochondrial ribosomal protein S18b [Mus musculus]
gi|18256035|gb|AAH21752.1| Mitochondrial ribosomal protein S18B [Mus musculus]
gi|74151554|dbj|BAE38883.1| unnamed protein product [Mus musculus]
gi|148691310|gb|EDL23257.1| mitochondrial ribosomal protein S18B, isoform CRA_d [Mus musculus]
Length = 254
Score = 40.0 bits (92), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 103 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLS 162
Query: 80 Y 80
Y
Sbjct: 163 Y 163
>gi|261399864|ref|NP_997699.2| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|149031788|gb|EDL86723.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Rattus
norvegicus]
Length = 257
Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 106 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKAREYGLLS 165
Query: 80 Y 80
Y
Sbjct: 166 Y 166
>gi|46237662|emb|CAE84037.1| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|187469104|gb|AAI66875.1| Mitochondrial ribosomal protein S18B [Rattus norvegicus]
Length = 253
Score = 40.0 bits (92), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 102 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKAREYGLLS 161
Query: 80 Y 80
Y
Sbjct: 162 Y 162
>gi|296813081|ref|XP_002846878.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842134|gb|EEQ31796.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 179
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++S+ G+I P+R + + QR+L+KAI+RA +GL+ V+
Sbjct: 118 YKNFAVMSEYVSETGRIKPARETGLRRVNQRKLSKAIRRAVSMGLMPSVH 167
>gi|126137880|ref|XP_001385463.1| hypothetical protein PICST_36650 [Scheffersomyces stipitis CBS
6054]
gi|126092741|gb|ABN67434.1| 30S ribosomal protein S18 [Scheffersomyces stipitis CBS 6054]
Length = 187
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 22 PLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
P G P Y +L+RFL+ G+I+P I+ S K Q+ L+ AI+ AR GL++
Sbjct: 115 PFETTGINPSTLYLMPEILSRFLTSTGQILPRSITGCSAKNQKLLSDAIRTARCCGLLS 173
>gi|226481391|emb|CAX73593.1| Ribosomal protein S18,domain-containing protein [Schistosoma
japonicum]
Length = 168
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 23 LSGKGAPR-----------IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
L G G PR I + D+R+L++FL G ++P ++ +S + Q L I+R
Sbjct: 57 LDGFGDPRDTDPISRLGLNIRHTDVRILSQFLRPDGTVLPRHVTGISCRSQWHLELMIER 116
Query: 72 ARYLGLI 78
AR GL+
Sbjct: 117 AREAGLL 123
>gi|296197608|ref|XP_002746355.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Callithrix jacchus]
Length = 258
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V ++ + L +AI++AR LGL++
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMRQHKRLTQAIQKARDLGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|290562611|gb|ADD38701.1| 28S ribosomal protein S18b, mitochondrial [Lepeophtheirus salmonis]
Length = 181
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ IDY+++RLL +F+ G+I+ S+ + V +K ++ AI++A+ GLI
Sbjct: 101 CPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKLYGLID 160
Query: 80 YVN 82
++
Sbjct: 161 SID 163
>gi|73972107|ref|XP_856628.1| PREDICTED: similar to 28S ribosomal protein S18b, mitochondrial
precursor (MRP-S18-b) (Mrps18b) (MRP-S18-2) isoform 2
[Canis familiaris]
Length = 170
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 18 CPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 77
Query: 80 Y 80
Y
Sbjct: 78 Y 78
>gi|242011260|ref|XP_002426373.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
gi|212510450|gb|EEB13635.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
Length = 181
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKA 68
+R+NV CP+ +DY++I LL F+S G I S+ + V + ++ A
Sbjct: 88 IRKNVISTGSPCPICRDEYLVVDYQNIELLKHFISPDNGTIFESKKTGVCQVQHYKIKLA 147
Query: 69 IKRARYLGLIAY 80
I +A+ GL++Y
Sbjct: 148 ILKAQNYGLLSY 159
>gi|225713768|gb|ACO12730.1| 28S ribosomal protein S18b, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 181
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ IDY+++RLL +F+ G+I+ S+ + V +K ++ AI++A+ GLI
Sbjct: 101 CPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKLYGLID 160
Query: 80 YVN 82
++
Sbjct: 161 SID 163
>gi|187734608|ref|YP_001876720.1| ribosomal protein S18 [Akkermansia muciniphila ATCC BAA-835]
gi|187424660|gb|ACD03939.1| ribosomal protein S18 [Akkermansia muciniphila ATCC BAA-835]
Length = 81
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RR P+ D+ L++F S+ GKI+P R++ +S K R++ + IKR
Sbjct: 19 RQMPRRRLDIPMDQVNLLNPDF-----LSKFTSETGKILPRRVTGLSAKMHRKVTREIKR 73
Query: 72 ARYLGLI 78
AR + L+
Sbjct: 74 ARSINLL 80
>gi|256075719|ref|XP_002574164.1| hypothetical protein [Schistosoma mansoni]
gi|238659362|emb|CAZ30397.1| conserved hypothetical protein [Schistosoma mansoni]
Length = 140
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RK C + K P +DYK++RLL++F+S G+I I+ + Q+ ++K I R+R G
Sbjct: 60 RKKCFICEKNIP-LDYKNVRLLSQFVSPYTGRIYGRHITGMCIPMQKRISKLIIRSRQFG 118
Query: 77 LIAY 80
+ +
Sbjct: 119 FMPF 122
>gi|197131546|gb|ACH47291.1| ribosomal protein S18 [Geranium carolinianum]
Length = 132
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
I Y +I + +F+S++GKI+ R++ ++ ++Q L +AIK+AR L L+++
Sbjct: 32 IHYTNISFICQFISKQGKILLRRVNRLTLQQQGLLDRAIKQARILCLVSF 81
>gi|260828289|ref|XP_002609096.1| hypothetical protein BRAFLDRAFT_126128 [Branchiostoma floridae]
gi|229294450|gb|EEN65106.1| hypothetical protein BRAFLDRAFT_126128 [Branchiostoma floridae]
Length = 123
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 30 RIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ YK+ +LL++FLS G+I I+ + KKQ E+ K IK A++LG +
Sbjct: 23 ELSYKNPQLLSQFLSPYTGRIYGQHITGLCDKKQEEVEKQIKNAQHLGFL 72
>gi|281209273|gb|EFA83446.1| hypothetical protein PPL_03594 [Polysphondylium pallidum PN500]
Length = 435
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRK--SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+V +P + V +K C L +++ ++ LL+ +L+ G I+P I+ K
Sbjct: 263 QVTRSPTTGKEVVGNKKFPKCLLCFDYGWKVEPMNVPLLSIYLNNDGDILPRYITGNCLK 322
Query: 61 KQRELAKAIKRARYLGLIAY 80
Q+++A+ IK+A++LGL +Y
Sbjct: 323 HQKKIARTIKQAKHLGLYSY 342
>gi|224009618|ref|XP_002293767.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970439|gb|EED88776.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 59
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ + ++ LL R+++ GKI+ S + K QR++AK +KRAR+LGLI ++
Sbjct: 7 LHHNNLILLRRYVTPGGKIMNRVQSRLGAKDQRKVAKLVKRARHLGLIPHM 57
>gi|241653590|ref|XP_002410487.1| ribosomal protein S18C, putative [Ixodes scapularis]
gi|215501661|gb|EEC11155.1| ribosomal protein S18C, putative [Ixodes scapularis]
Length = 96
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 31 IDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+DYK+++LL++F+S GKI I+ + K+QR + I +AR GL+ +
Sbjct: 21 VDYKNVKLLSQFVSSYTGKIYEKHITGLCEKQQRRVKTEIFKARKCGLMPH 71
>gi|256071003|ref|XP_002571831.1| hypothetical protein [Schistosoma mansoni]
gi|238656979|emb|CAZ28061.1| expressed protein [Schistosoma mansoni]
Length = 168
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
I + D+R+L++FL G ++P IS +S + Q L I+RAR GL+
Sbjct: 76 IRHTDVRILSQFLRPDGTVLPRHISGISCRSQSHLELMIERARKAGLL 123
>gi|149244928|ref|XP_001527007.1| hypothetical protein LELG_01836 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449401|gb|EDK43657.1| hypothetical protein LELG_01836 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 215
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
PR Y +L++F++ G+I+ ++ +S QR+LA AIK AR LGL++ V+
Sbjct: 151 PRNLYLMPEVLSKFITSSGQIMSRDMTGLSSGNQRKLAAAIKTARSLGLLSTVH 204
>gi|297170666|gb|ADI21690.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
HF0130_14P10]
Length = 67
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 24 SGKGAPR------IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+ +G PR I + D L++F++ GKI+P + + ++ K+QR +++ IK +R+L L
Sbjct: 6 TEEGEPRRKNPEDITFLDADALSKFVTDTGKILPRKYTGLTPKQQRRISRTIKTSRHLLL 65
Query: 78 I 78
+
Sbjct: 66 V 66
>gi|255573810|ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223532748|gb|EEF34527.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 258
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D++++R L+ F+++ G + + +S K QR++A+ IK AR GL+ + +
Sbjct: 166 KADFRNVRFLSNFITEAGIMHKRSKTKISAKAQRKVAREIKTARAFGLMPFTTM 219
>gi|156371103|ref|XP_001628605.1| predicted protein [Nematostella vectensis]
gi|156215586|gb|EDO36542.1| predicted protein [Nematostella vectensis]
Length = 201
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + YKD+ L++FLS G ++ R + V K+Q +L AIK +R LG
Sbjct: 89 GCPICSRNII-FSYKDVLFLSQFLSPEGNLLNRRQTGVCKKQQLKLENAIKLSRRLGFTG 147
>gi|255730997|ref|XP_002550423.1| hypothetical protein CTRG_04721 [Candida tropicalis MYA-3404]
gi|240132380|gb|EER31938.1| hypothetical protein CTRG_04721 [Candida tropicalis MYA-3404]
Length = 196
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 22 PLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
P + G P+ Y +L++FL+ G+I+ ++ S + Q++LA AIK AR LGL++
Sbjct: 124 PFAKSGIDPKTLYLMPEILSKFLTSTGQILSRDVTGCSAENQKKLAMAIKYARSLGLLS 182
>gi|255710687|ref|XP_002551627.1| KLTH0A03938p [Lachancea thermotolerans]
gi|238933004|emb|CAR21185.1| KLTH0A03938p [Lachancea thermotolerans]
Length = 171
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 10 LRRNVSHRRKSCPLSGK-GAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
L + S + S L K G +D Y + L++F++ GKI+ ++ +S K QR L+K
Sbjct: 83 LDKKFSSKNSSNDLFDKNGVDPLDLYTNPEFLSQFVTSSGKILHRDVTGLSAKNQRRLSK 142
Query: 68 AIKRARYLGLIA 79
AI+R + +GL++
Sbjct: 143 AIRRCQAIGLMS 154
>gi|332018576|gb|EGI59161.1| 28S ribosomal protein S18a, mitochondrial [Acromyrmex echinatior]
Length = 134
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ +CPL G + + D+ +LN+FL + G ++P R++ + +Q ++ + A+ G
Sbjct: 63 KSNACPLCATGLD-VKHTDVLILNQFLRKNGTMLPRRVTGLCMMQQNKVTILVTMAKRAG 121
Query: 77 LIAYV 81
+ Y+
Sbjct: 122 SLIYM 126
>gi|301786981|ref|XP_002928904.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 258
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|73972105|ref|XP_532057.2| PREDICTED: similar to 28S ribosomal protein S18b, mitochondrial
precursor (MRP-S18-b) (Mrps18b) (MRP-S18-2) isoform 1
[Canis familiaris]
Length = 257
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|281337509|gb|EFB13093.1| hypothetical protein PANDA_018965 [Ailuropoda melanoleuca]
Length = 232
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 79 CPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 138
Query: 80 Y 80
Y
Sbjct: 139 Y 139
>gi|30314948|gb|AAP30724.1| ribosomal protein S18 [Pinus squamata]
Length = 43
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
LS++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 LSEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|126310092|ref|XP_001366285.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 196
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ R++A
Sbjct: 70 CPICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCLEEHRKVA 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|241948719|ref|XP_002417082.1| unnamed protein product [Candida dubliniensis CD36]
gi|223640420|emb|CAX44672.1| unnamed protein product [Candida dubliniensis CD36]
Length = 196
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 20 SCPLSGKGAPRIDYKDIRL----LNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
S P G ID K++ L L++FL+ G+I+P ++ + K Q+ L+ AI+ AR L
Sbjct: 122 SDPFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRHLTGCNAKNQKRLSMAIEYARSL 178
Query: 76 GLIA 79
GL++
Sbjct: 179 GLLS 182
>gi|328779125|ref|XP_003249593.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Apis
mellifera]
Length = 142
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 32 DYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYK++RLL++F S+ G+I I+ + KQ+++ + I +A++ GL+ Y+
Sbjct: 68 DYKNVRLLSQFQSRYTGRIYEKHITGLCEYKQKKVEQEIIKAQHAGLMGYM 118
>gi|221113925|ref|XP_002161516.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 142
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYK--DIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
L + N+ K CP+ +G I +K D+ L++FL+ G ++ R++ V K+Q +
Sbjct: 45 LTKDNIPEN-KGCPVCSRG---ISFKVDDVLFLSQFLTPEGHMMNRRVTGVCKKQQVAIF 100
Query: 67 KAIKRARYLGLIAYV 81
KAI AR GL+ V
Sbjct: 101 KAIHIARRQGLLPRV 115
>gi|149754681|ref|XP_001491860.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S18-2
(MRP-S18-2) (Mrps18b) [Equus caballus]
Length = 258
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTEAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|196230313|ref|ZP_03129176.1| ribosomal protein S18 [Chthoniobacter flavus Ellin428]
gi|196225910|gb|EDY20417.1| ribosomal protein S18 [Chthoniobacter flavus Ellin428]
Length = 79
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+DYK+ +L +F+++ GKI+P R++ + R++ + IKRAR + L+
Sbjct: 31 LDYKNPDILKKFVTESGKILPRRLTGMPAHFHRKITREIKRARAVLLM 78
>gi|221124129|ref|XP_002163436.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 142
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYK--DIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
L + N+ K CP+ +G I +K D+ L++FL+ G ++ R++ V K+Q +
Sbjct: 45 LTKDNIPEN-KGCPVCSRG---ISFKVDDVLFLSQFLTPEGHMMNRRVTGVCKKQQVAIF 100
Query: 67 KAIKRARYLGLIAYV 81
KAI AR GL+ V
Sbjct: 101 KAIHIARRQGLLPRV 115
>gi|84370073|ref|NP_001033613.1| 28S ribosomal protein S18b, mitochondrial [Bos taurus]
gi|83638632|gb|AAI09914.1| Mitochondrial ribosomal protein S18B [Bos taurus]
Length = 258
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|149069350|gb|EDM18791.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Rattus
norvegicus]
Length = 149
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCREEHRKME 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL
Sbjct: 117 ECVKMAHRAGLF 128
>gi|156552942|ref|XP_001602798.1| PREDICTED: similar to mitochondrial ribosomal protein, S18C,
putative [Nasonia vitripennis]
Length = 145
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
AE A P+ N R + + K DYK++R L++F S+ G+I I+ +
Sbjct: 41 AEEADAPIELENPYQRERKICILCKHNIDPDYKNVRFLSQFQSRFTGRIYGRHITGLCKY 100
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
KQ + I +A++ GL+ + N
Sbjct: 101 KQERVENEITKAQHAGLMPFYN 122
>gi|108935897|sp|P82918|RT18B_BOVIN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2
Length = 258
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|119931099|ref|XP_001250820.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Bos
taurus]
gi|296474243|gb|DAA16358.1| 28S ribosomal protein S18b, mitochondrial [Bos taurus]
Length = 258
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++
Sbjct: 105 CPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLS 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|268573902|ref|XP_002641928.1| Hypothetical protein CBG16627 [Caenorhabditis briggsae]
Length = 181
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L P ++ YKD+ +L +F+ G ++P +++ + K+Q L + + +A + GL
Sbjct: 66 CSLCTCNVPVKLSYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRLERCVMQAFWSGLFG 125
>gi|72165654|ref|XP_792269.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115955609|ref|XP_001183825.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 195
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
C L P I YK+++LL++F+S G+I I+ + +QR + KA+KRA +G +
Sbjct: 80 CILCKYQVP-ISYKNVQLLSQFVSPNTGRIFGRHITKLCEAQQRRVTKAVKRAITMGFM 137
>gi|240849461|ref|NP_001155496.1| 28S ribosomal protein S18a, mitochondrial [Acyrthosiphon pisum]
gi|239792177|dbj|BAH72459.1| ACYPI002845 [Acyrthosiphon pisum]
Length = 182
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+P + + + CPL G + + D+ +L++F+ G ++P R++ + +Q+
Sbjct: 54 VPSPRKDHLIQNNNECCPLCSLGL-DVKHTDVLILSQFVRSDGCMMPRRVTGLCKTQQKR 112
Query: 65 LAKAIKRARYLGLIA 79
++K + A GL+
Sbjct: 113 MSKLVSMAHKAGLMC 127
>gi|73972954|ref|XP_532152.2| PREDICTED: similar to 28S ribosomal protein S18a, mitochondrial
precursor (MRP-S18-a) (Mrps18a) (MRP-S18-3) isoform 2
[Canis familiaris]
Length = 196
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ Y+D+ LL +F+ RG ++P RI+ + ++ R++ +
Sbjct: 71 PICRWNLKHK-------------YSYEDVLLLRQFIRPRGGMLPRRITGLCQEEHRKIEE 117
Query: 68 AIKRARYLGLI 78
+K A GL
Sbjct: 118 CVKMAHRAGLF 128
>gi|169860853|ref|XP_001837061.1| hypothetical protein CC1G_00197 [Coprinopsis cinerea okayama7#130]
gi|116501783|gb|EAU84678.1| hypothetical protein CC1G_00197 [Coprinopsis cinerea okayama7#130]
Length = 176
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+L+ F++ G+I P + ++ K QR+L KAI+RAR +G+I
Sbjct: 124 ILSHFVTNMGQIKPRTQTGLTVKSQRKLGKAIRRARMMGVI 164
>gi|28200287|gb|AAO31775.1| mitochondrial ribosomal protein S18C [Branchiostoma belcheri
tsingtauense]
Length = 179
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 30 RIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ YK+ +LL++FLS G+I I+ + KKQ E+ + I+ A+YLG +
Sbjct: 79 ELSYKNPQLLSQFLSPYTGRIYGHHITGLCDKKQAEVERQIRNAQYLGFL 128
>gi|193636723|ref|XP_001949656.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Acyrthosiphon pisum]
Length = 194
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY+++ LL +F+S GK++ +++ + K+ L A+K+A+ G I
Sbjct: 118 CPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVAVKKAKDWGFIK 177
Query: 80 Y 80
+
Sbjct: 178 F 178
>gi|313681799|ref|YP_004059537.1| SSU ribosomal protein s18p [Sulfuricurvum kujiense DSM 16994]
gi|313154659|gb|ADR33337.1| SSU ribosomal protein S18P [Sulfuricurvum kujiense DSM 16994]
Length = 85
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ L LS+R KI+P R++ + Q + AIK++R LI Y
Sbjct: 22 IDYKDVASLKYSLSERFKIMPRRLTGNCKRHQDMVTIAIKQSRAAALIPYT 72
>gi|119193212|ref|XP_001247212.1| hypothetical protein CIMG_00983 [Coccidioides immitis RS]
gi|303312267|ref|XP_003066145.1| mitochondrial ribosomal protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105807|gb|EER24000.1| mitochondrial ribosomal protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040142|gb|EFW22076.1| 37S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
Length = 184
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P YK+ +++ ++++ G+I P ++ + QR++AKAI+RA LGL+ V
Sbjct: 119 PLDQYKNFSIMSEYMTEMGRIKPRSVTGLRPVNQRKMAKAIRRAIGLGLMPSV 171
>gi|38454252|ref|NP_942051.1| 28S ribosomal protein S18a, mitochondrial [Rattus norvegicus]
gi|37231675|gb|AAH58507.1| Mitochondrial ribosomal protein S18A [Rattus norvegicus]
gi|149069351|gb|EDM18792.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Rattus
norvegicus]
Length = 196
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCREEHRKME 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL
Sbjct: 117 ECVKMAHRAGLF 128
>gi|32262086|gb|AAP77135.1| ribosomal protein S18 [Helicobacter hepaticus ATCC 51449]
Length = 59
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ +L LS+R KI+P R++ + + Q + AIKRAR++ LI Y+
Sbjct: 1 MEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRARHMALIPYI 46
>gi|226489048|emb|CAX74873.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489050|emb|CAX74874.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489052|emb|CAX74875.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489054|emb|CAX74876.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
Length = 142
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+K C + K P +DYK++RLL++F+S G+I I+ + Q+ +++ I R+R G
Sbjct: 60 KKKCFICEKNIP-LDYKNVRLLSQFVSPYTGRIYGRHITGMCIPMQKRISQLITRSRQFG 118
Query: 77 LIAY 80
+ +
Sbjct: 119 FMPF 122
>gi|209732018|gb|ACI66878.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|209737816|gb|ACI69777.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|303666223|gb|ADM16221.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
Length = 244
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ I Y++++LL +F+S G + S + V K+Q++L +AI AR GL+
Sbjct: 124 CPICRDSNVIIHYQNVKLLQQFISPNTGIVYDSTRTGVCQKQQKQLNQAIGTARDHGLLP 183
Query: 80 Y 80
+
Sbjct: 184 F 184
>gi|149732232|ref|XP_001502208.1| PREDICTED: similar to mitochondrial ribosomal protein S18A [Equus
caballus]
Length = 196
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P RI+ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YGYEDVLLLSQFIRPHGGMLPRRITGLCQEEHRKIE 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|126309617|ref|XP_001375521.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S18-2
(MRP-S18-2) (Mrps18b) [Monodelphis domestica]
Length = 246
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI +AR GL++
Sbjct: 103 CPICRDQKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTEAILKARDQGLLS 162
Query: 80 Y 80
Y
Sbjct: 163 Y 163
>gi|254582328|ref|XP_002497149.1| ZYRO0D16566p [Zygosaccharomyces rouxii]
gi|238940041|emb|CAR28216.1| ZYRO0D16566p [Zygosaccharomyces rouxii]
Length = 165
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
Y +L++F+S GKI+ ++ +S K QR ++KAI+R + +GL++
Sbjct: 102 YTSPEVLSQFVSSTGKILHRDVTGLSAKNQRRISKAIRRCQAIGLMS 148
>gi|324513285|gb|ADY45464.1| 28S ribosomal protein S18a [Ascaris suum]
Length = 176
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+C L P ++ Y D+ +L +F+ + G ++P +++ + K+Q + + + +A + GL
Sbjct: 63 TCSLCTCNIPIKVKYSDVLILEQFMREDGTVLPRQLTGLCKKQQLRVERCVMQAHWAGLF 122
>gi|6683344|dbj|BAA89131.1| ribosomal protein S18 [Pinus krempfii]
gi|6683347|dbj|BAA89133.1| ribosomal protein S18 [Pinus cembra]
gi|6683350|dbj|BAA89135.1| ribosomal protein S18 [Pinus pumila]
gi|6683353|dbj|BAA89137.1| ribosomal protein S18 [Pinus koraiensis]
gi|6683356|dbj|BAA89139.1| ribosomal protein S18 [Pinus strobus]
gi|6683359|dbj|BAA89141.1| ribosomal protein S18 [Pinus monticola]
gi|6683362|dbj|BAA89143.1| ribosomal protein S18 [Pinus parviflora]
gi|6683365|dbj|BAA89145.1| ribosomal protein S18 [Pinus wallichiana]
gi|6683368|dbj|BAA89147.1| ribosomal protein S18 [Pinus kwangtungensis]
gi|6683371|dbj|BAA89149.1| ribosomal protein S18 [Pinus peuce]
gi|6683374|dbj|BAA89151.1| ribosomal protein S18 [Pinus armandii]
gi|6683377|dbj|BAA89153.1| ribosomal protein S18 [Pinus aristata]
gi|6683380|dbj|BAA89155.1| ribosomal protein S18 [Pinus balfouriana]
gi|6683383|dbj|BAA89157.1| ribosomal protein S18 [Pinus gerardiana]
gi|6683386|dbj|BAA89159.1| ribosomal protein S18 [Pinus bungeana]
gi|6683389|dbj|BAA89161.1| ribosomal protein S18 [Pinus sylvestris]
gi|6683392|dbj|BAA89163.1| ribosomal protein S18 [Pinus tabuliformis]
gi|6683395|dbj|BAA89165.1| ribosomal protein S18 [Pinus merkusii]
gi|6683398|dbj|BAA89167.1| ribosomal protein S18 [Pinus hwangshanensis]
gi|6683401|dbj|BAA89169.1| ribosomal protein S18 [Pinus kesiya]
gi|6683404|dbj|BAA89171.1| ribosomal protein S18 [Pinus densiflora]
gi|6683407|dbj|BAA89173.1| ribosomal protein S18 [Pinus massoniana]
gi|6683410|dbj|BAA89175.1| ribosomal protein S18 [Pinus yunnanensis]
gi|6683413|dbj|BAA89177.1| ribosomal protein S18 [Pinus nigra]
gi|6683416|dbj|BAA89179.1| ribosomal protein S18 [Pinus pinaster]
gi|6683419|dbj|BAA89181.1| ribosomal protein S18 [Pinus halepensis]
gi|6683422|dbj|BAA89183.1| ribosomal protein S18 [Pinus brutia]
gi|6683425|dbj|BAA89185.1| ribosomal protein S18 [Pinus heldreichii]
gi|6683428|dbj|BAA89187.1| ribosomal protein S18 [Pinus pinea]
gi|6683431|dbj|BAA89189.1| ribosomal protein S18 [Pinus canariensis]
gi|6683434|dbj|BAA89191.1| ribosomal protein S18 [Pinus roxburghii]
gi|6683440|dbj|BAA89195.1| ribosomal protein S18 [Larix decidua]
gi|6683443|dbj|BAA89197.1| ribosomal protein S18 [Abies numidica]
gi|6683446|dbj|BAA89199.1| ribosomal protein S18 [Keteleeria davidiana]
gi|6683449|dbj|BAA89201.1| ribosomal protein S18 [Pseudolarix amabilis]
gi|6683452|dbj|BAA89203.1| ribosomal protein S18 [Cathaya argyrophylla]
gi|121807668|gb|ABM65544.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807671|gb|ABM65546.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807674|gb|ABM65548.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807677|gb|ABM65550.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807680|gb|ABM65552.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807683|gb|ABM65554.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807695|gb|ABM65562.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807698|gb|ABM65564.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807701|gb|ABM65566.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807704|gb|ABM65568.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807707|gb|ABM65570.1| ribosomal protein S18 [Pinus longaeva]
gi|169823070|gb|ACA96716.1| ribosomal protein S18 [Pinus tabuliformis var. henryi]
Length = 43
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 ISEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|325182642|emb|CCA17097.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 319
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
D LL F++ G+I P R + + +QR++A+ IK AR+L L+ Y++
Sbjct: 188 DTDLLRLFVTPAGRIRPRRFTGLRGPQQRKVARGIKVARHLALLPYLS 235
>gi|74188911|dbj|BAE39228.1| unnamed protein product [Mus musculus]
Length = 254
Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIK 70
RN CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI+
Sbjct: 94 RNNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQ 153
Query: 71 RARYLGLIAY 80
+AR GL++Y
Sbjct: 154 KARECGLLSY 163
>gi|17556825|ref|NP_498835.1| hypothetical protein ZC262.8 [Caenorhabditis elegans]
gi|15963734|gb|AAK67242.2|L23647_6 Hypothetical protein ZC262.8 [Caenorhabditis elegans]
Length = 183
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L P ++ YKD+ +L +F+ G ++P +++ + K+Q + + + +A + GL
Sbjct: 68 CSLCTCNVPIKLTYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRMERCVMQAFWSGLFG 127
>gi|289643457|ref|ZP_06475576.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
gi|289506709|gb|EFD27689.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
Length = 55
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
R+K+ L +G +DYKD+ LL +F+S RGKI R++ ++ +
Sbjct: 12 RKKTNILVERGITYVDYKDVVLLRQFISDRGKIRSRRVTGLTSQ 55
>gi|291395950|ref|XP_002714378.1| PREDICTED: mitochondrial ribosomal protein S18B [Oryctolagus
cuniculus]
Length = 253
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLR 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|157125818|ref|XP_001660797.1| mitochondrial ribosomal protein, S18B, putative [Aedes aegypti]
gi|108882650|gb|EAT46875.1| mitochondrial ribosomal protein, S18B, putative [Aedes aegypti]
Length = 208
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++ L+ +F+S Q GK++ +I+ + K+ EL A++RA GLI
Sbjct: 130 CPICRDEFLVLDHRNTDLIKQFVSSQSGKVLSYQITGLCQKRHLELLVAVERAMDYGLIT 189
Query: 80 Y 80
+
Sbjct: 190 F 190
>gi|121807686|gb|ABM65556.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807689|gb|ABM65558.1| ribosomal protein S18 [Pinus balfouriana]
Length = 43
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 VSEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|90074918|dbj|BAE87139.1| unnamed protein product [Macaca fascicularis]
Length = 258
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I S + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHSLYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|157364998|ref|NP_001098635.1| 28S ribosomal protein S18b, mitochondrial precursor [Macaca
mulatta]
gi|75062118|sp|Q5TM62|RT18B_MACMU RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|55700809|dbj|BAD69764.1| mitochondrial ribosomal protein S18B [Macaca mulatta]
Length = 258
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I S + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHSLYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|326471273|gb|EGD95282.1| 37S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
Length = 179
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+I +++ ++++ G+I +R + + QR+L+KAI+RA +GL+ V+
Sbjct: 118 YKNIAVMSEYVTETGRIKSARDTGLRRINQRKLSKAIRRAVSMGLMPSVH 167
>gi|156552274|ref|XP_001600138.1| PREDICTED: similar to CG31450-PA [Nasonia vitripennis]
Length = 158
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+CPL G + + D+ +L +F++ +G ++P RI+ + + +Q+ + + A+ GL+
Sbjct: 66 ACPLCSAGV-NVKHTDVLILKQFVNSQGHMLPRRITGLCYIQQKRVGIMVTMAQKAGLM 123
>gi|168036563|ref|XP_001770776.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677994|gb|EDQ64458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RNV R S L KG R D K I LL F++ +GKIVP IS + + L +A
Sbjct: 129 RNVLVRELSKVL--KGDVRFDDKHINLLADFMTNKGKIVPVNISGMVERGHSYLTRA 183
>gi|315295745|ref|ZP_07872235.1| ribosomal protein S18 [Listeria ivanovii FSL F6-596]
gi|313630789|gb|EFR98527.1| ribosomal protein S18 [Listeria ivanovii FSL F6-596]
Length = 40
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 2 GKILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 36
>gi|327303002|ref|XP_003236193.1| 37S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|326461535|gb|EGD86988.1| 37S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
Length = 179
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+I +++ ++++ G+I +R + + QR+L+KAI+RA +GL+ V+
Sbjct: 118 YKNIAVMSEYVTETGRIKSARDTGLRRINQRKLSKAIRRAVSMGLMPSVH 167
>gi|308501977|ref|XP_003113173.1| hypothetical protein CRE_25107 [Caenorhabditis remanei]
gi|308265474|gb|EFP09427.1| hypothetical protein CRE_25107 [Caenorhabditis remanei]
Length = 181
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L P ++ YKD+ +L +F+ G ++P +++ + K+Q + + + +A + GL
Sbjct: 66 CSLCTCNVPVKLSYKDVLILEQFMRNDGTVLPRQLTGLCKKQQLRVERCVMQAFWSGLFG 125
>gi|118088000|ref|XP_001234387.1| PREDICTED: hypothetical protein isoform 1 [Gallus gallus]
Length = 144
Score = 37.0 bits (84), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ DY D+ LL++F+ G ++P RI+ + ++ +++A
Sbjct: 66 PICRWNLKHK-------------YDYVDVLLLSQFIRSDGGMLPRRITGLCLEEHKKIAA 112
Query: 68 AIKRARYLGLI 78
++ A GL+
Sbjct: 113 CVQMAHRAGLL 123
>gi|178057031|ref|NP_001116612.1| 28S ribosomal protein S18b, mitochondrial precursor [Sus scrofa]
gi|194040130|ref|XP_001926903.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Sus
scrofa]
gi|75063858|sp|Q767K8|RT18B_PIG RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|41529169|dbj|BAD08429.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
gi|41529182|dbj|BAD08441.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
Length = 258
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL+
Sbjct: 105 CPICRDQKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLR 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|170091704|ref|XP_001877074.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648567|gb|EDR12810.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 115
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+L+ F+S+ GKI + ++ K QR+L KAI+RA+ +G+I
Sbjct: 56 VLSNFISEMGKIYGRSATGLTIKSQRKLGKAIRRAKMMGII 96
>gi|225378676|ref|ZP_03755897.1| hypothetical protein ROSEINA2194_04346 [Roseburia inulinivorans
DSM 16841]
gi|225209513|gb|EEG91867.1| hypothetical protein ROSEINA2194_04346 [Roseburia inulinivorans
DSM 16841]
Length = 56
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGK 48
A+ P+ RR + R+K C GK IDYKD L R++S+RGK
Sbjct: 7 ADREGAPMKRRPMHRRKKVCVFCGKDNV-IDYKDTNKLKRYISERGK 52
>gi|326915357|ref|XP_003203985.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Meleagris gallopavo]
Length = 190
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ DY D+ LL++F+ G ++P RI+ + ++ +++A
Sbjct: 65 CPICRWNLKHK-------------YDYVDVLLLSQFIRSDGGMLPRRITGLCLEEHKKIA 111
Query: 67 KAIKRARYLGLI 78
++ A GL+
Sbjct: 112 ACVQMAHRAGLL 123
>gi|328782663|ref|XP_624905.3| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Apis
mellifera]
Length = 200
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY+++ LL +F+S+ G+I+ +S+ K ++L AI ++R GL
Sbjct: 126 CPICRDEYLVLDYRNVDLLKQFISKDTGEILNYDYTSLCQKAYKDLLVAIMKSREYGLFP 185
Query: 80 Y 80
Y
Sbjct: 186 Y 186
>gi|328873431|gb|EGG21798.1| hypothetical protein DFA_01684 [Dictyostelium fasciculatum]
Length = 852
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
R++ ++ LL+ +++ G I+P I+ K Q+ LA+ IK A++LG +Y
Sbjct: 693 RVEPLNVPLLSIYMNTEGDILPRYITGNCLKHQKRLARNIKAAKHLGFFSY 743
>gi|67968313|dbj|BAE00213.1| ribosomal protein S18 [Selaginella uncinata]
Length = 80
Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+D+K+ R S+RGKI+P R++ + K+QR + A KRAR L
Sbjct: 24 VDHKNTSSPRRSPSKRGKILPKRMNRSTSKQQRLMTTAAKRARISAL 70
>gi|242208503|ref|XP_002470102.1| mitochondrial ribosomal protein S18 [Postia placenta Mad-698-R]
gi|220730854|gb|EED84705.1| mitochondrial ribosomal protein S18 [Postia placenta Mad-698-R]
Length = 197
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
P + + LL+R+++ GKI ++ ++ K QR L K+I+RA+ +G+I
Sbjct: 133 PLDECTNSSLLSRYVTDIGKIQSRAVTGLTWKNQRRLGKSIRRAKMMGII 182
>gi|307212292|gb|EFN88100.1| 28S ribosomal protein S18b, mitochondrial [Harpegnathos saltator]
Length = 196
Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++I+LL +F+ G ++ + + V KK +EL A+ +A+ G+I
Sbjct: 118 CPICRDEYLILDHRNIKLLEQFIDIYNGNVLSYQKTGVCQKKHKELLVALTKAKDYGIIT 177
Query: 80 Y 80
+
Sbjct: 178 F 178
>gi|321451070|gb|EFX62848.1| hypothetical protein DAPPUDRAFT_67655 [Daphnia pulex]
Length = 113
Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D +++ LL +F+S G I+P+ + + K REL AI +A+ GLI
Sbjct: 38 CPICRDEYLILDCRNVVLLRQFISPFNGAILPTEKTGLCQHKHRELVVAIMKAKDYGLIK 97
Query: 80 Y 80
+
Sbjct: 98 F 98
>gi|118087998|ref|XP_419495.2| PREDICTED: hypothetical protein isoform 2 [Gallus gallus]
Length = 190
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ DY D+ LL++F+ G ++P RI+ + ++ +++A
Sbjct: 66 PICRWNLKHK-------------YDYVDVLLLSQFIRSDGGMLPRRITGLCLEEHKKIAA 112
Query: 68 AIKRARYLGLI 78
++ A GL+
Sbjct: 113 CVQMAHRAGLL 123
>gi|148691521|gb|EDL23468.1| mitochondrial ribosomal protein S18A, isoform CRA_a [Mus musculus]
Length = 149
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIE 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|326479369|gb|EGE03379.1| 37S ribosomal protein S18 [Trichophyton equinum CBS 127.97]
Length = 87
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+I +++ ++++ G+I +R + + QR+L+KAI+RA +GL+ V+
Sbjct: 26 YKNIAVMSEYVTETGRIKSARDTGLRRINQRKLSKAIRRAVSMGLMPSVH 75
>gi|121807692|gb|ABM65560.1| ribosomal protein S18 [Pinus balfouriana]
Length = 43
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++G+I+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 ISEQGRILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|148691523|gb|EDL23470.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Mus musculus]
Length = 183
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 57 CPICRWNLKHK-------------YTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIE 103
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 104 ECVKMAHRAGLL 115
>gi|307212968|gb|EFN88550.1| 28S ribosomal protein S18c, mitochondrial [Harpegnathos saltator]
Length = 120
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 32 DYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++RLL++F S+ G+I I+ + KQ+ + + I +A+ GL+ +++
Sbjct: 46 DYKNVRLLSQFQSRYTGRIYEKHITGLCEYKQKRVQEEITKAQCAGLMGFMS 97
>gi|92087050|ref|NP_001035204.1| 28S ribosomal protein S18b, mitochondrial precursor [Pan
troglodytes]
gi|115311862|sp|Q1XHY1|RT18B_PANTR RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|90960878|dbj|BAE92787.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|90960881|dbj|BAE92789.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
Length = 258
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|156544129|ref|XP_001605882.1| PREDICTED: similar to CG10757-PA [Nasonia vitripennis]
Length = 208
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 AEVAPT----PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISS 56
+ APT +R V CP+ +D+++ +LLN+F+S G+++ ++ +
Sbjct: 102 GQFAPTRTRKTCVRNKVITTSNPCPICRDEYLVLDHRNTKLLNQFISPYNGELLQTKKTG 161
Query: 57 VSHKKQRELAKAIKRARYLGLIAY 80
+ K+ L AI RA+ G I++
Sbjct: 162 LCRKQHENLEVAIYRAKDYGTISF 185
>gi|17505206|ref|NP_081044.1| 28S ribosomal protein S18a, mitochondrial precursor [Mus musculus]
gi|12834120|dbj|BAB22794.1| unnamed protein product [Mus musculus]
gi|26389998|dbj|BAC25825.1| unnamed protein product [Mus musculus]
gi|37748383|gb|AAH58959.1| Mitochondrial ribosomal protein S18A [Mus musculus]
gi|74182479|dbj|BAE42864.1| unnamed protein product [Mus musculus]
gi|148691524|gb|EDL23471.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Mus musculus]
Length = 196
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIE 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|332245892|ref|XP_003272085.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Nomascus
leucogenys]
Length = 258
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|328713007|ref|XP_003244971.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Acyrthosiphon pisum]
Length = 152
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 32 DYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
DYK+ R+L++F+S+ G+I I+ + KQ + K IK++R GL+ +
Sbjct: 78 DYKNTRMLSQFISRFTGRIYGRHITGLCRHKQDHVEKEIKKSREAGLMPF 127
>gi|237841577|ref|XP_002370086.1| ribosomal protein S18 domain containing protein [Toxoplasma gondii
ME49]
gi|211967750|gb|EEB02946.1| ribosomal protein S18 domain containing protein [Toxoplasma gondii
ME49]
gi|221482538|gb|EEE20886.1| hypothetical protein TGGT1_066530 [Toxoplasma gondii GT1]
gi|221504574|gb|EEE30247.1| ribosomal protein S18 domain protein, putative [Toxoplasma gondii
VEG]
Length = 360
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
I ++D+ +L+ F+ + G I+P R + S +QR + KAI AR + L Y
Sbjct: 207 ISWRDLHILHHFVGENGLILPRRTTHASRYQQRCIFKAICMARRMALFPY 256
>gi|297170556|gb|ADI21584.1| hypothetical protein [uncultured verrucomicrobium HF0070_35E03]
Length = 65
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+S P + + D L ++ + GKI+P + + ++ +QR+++K IK+AR++ L+
Sbjct: 5 ESIPAKSRNPENYTFLDKEALAKYTTDTGKILPRKYTGLTPMQQRKVSKLIKKARHMQLV 64
>gi|163914787|ref|NP_001106610.1| mitochondrial ribosomal protein S18B [Xenopus (Silurana)
tropicalis]
gi|156229976|gb|AAI52129.1| Mrps18b protein [Danio rerio]
gi|160773822|gb|AAI55448.1| LOC100127832 protein [Xenopus (Silurana) tropicalis]
Length = 242
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ I YK++ LL +F + G + ++ V K+Q+ L+KAI+ A+ GL+
Sbjct: 119 CPICRDPNIIIHYKNVNLLQQFFCPETGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLL 177
>gi|24212196|sp|Q99N85|RT18A_MOUSE RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|13620907|dbj|BAB41006.1| mitochondrial ribosomal protein S18a [Mus musculus]
Length = 196
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 70 CPICRWNLKHK-------------YTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIE 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|62955491|ref|NP_001017759.1| 28S ribosomal protein S18b, mitochondrial [Danio rerio]
gi|62204689|gb|AAH93356.1| Mitochondrial ribosomal protein S18B [Danio rerio]
gi|126632471|emb|CAM56396.1| novel protein similar to vertebrate mitochondrial ribosomal protein
S18B (MRPS18B) [Danio rerio]
gi|182889438|gb|AAI65094.1| Mrps18b protein [Danio rerio]
Length = 242
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ I YK++ LL +F + G + ++ V K+Q+ L+KAI+ A+ GL+
Sbjct: 119 CPICRDPNIIIHYKNVNLLQQFFCPETGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLL 177
>gi|323305233|gb|EGA58980.1| Rsm18p [Saccharomyces cerevisiae FostersB]
Length = 153
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 112 RILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 153
>gi|603283|gb|AAB64585.1| Yer050cp [Saccharomyces cerevisiae]
gi|207345971|gb|EDZ72612.1| YER050Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323355255|gb|EGA87080.1| Rsm18p [Saccharomyces cerevisiae VL3]
Length = 202
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 161 RILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 202
>gi|268530714|ref|XP_002630483.1| Hypothetical protein CBG11219 [Caenorhabditis briggsae]
gi|187030547|emb|CAP30411.1| hypothetical protein CBG_11219 [Caenorhabditis briggsae AF16]
Length = 134
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
+E P L + + C L G +DYK+ RLL +F+S G++ I+ + +
Sbjct: 30 SEDEPVVLENNPYTKAPRKCLLCSTGV-ELDYKNARLLQQFVSTFSGRVYDRHITGLCDE 88
Query: 61 KQRELAKAIKRARYLGLI 78
+Q++L +AI ++R G +
Sbjct: 89 QQKKLIEAIAKSRRAGFM 106
>gi|259145960|emb|CAY79220.1| Rsm18p [Saccharomyces cerevisiae EC1118]
Length = 153
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 112 RILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 153
>gi|321466269|gb|EFX77265.1| hypothetical protein DAPPUDRAFT_305829 [Daphnia pulex]
Length = 143
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
N + K C + K +DYK+ RLL++FLS GK+ I+ + KQ+ + I +
Sbjct: 50 NPYQKEKRCCVLCKYDVNVDYKNARLLSQFLSPFTGKVYERNITGLCKSKQKIVESEIIK 109
Query: 72 ARYLGLIA 79
A+ G +A
Sbjct: 110 AQNAGYLA 117
>gi|195107508|ref|XP_001998354.1| GI23675 [Drosophila mojavensis]
gi|193914948|gb|EDW13815.1| GI23675 [Drosophila mojavensis]
Length = 155
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 67 CPECTLGL-DIKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGALVTMAQKAGLMPN 125
Query: 81 VN 82
+N
Sbjct: 126 LN 127
>gi|170591478|ref|XP_001900497.1| hypothetical protein [Brugia malayi]
gi|158592109|gb|EDP30711.1| conserved hypothetical protein [Brugia malayi]
Length = 193
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 14 VSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ H ++C L P +I Y D+ +L +F+ + G ++P +++ + K+Q+ +
Sbjct: 58 LKHSPETCTLCTCNVPIKIRYSDVLILEQFMRKDGTVLPQQLTGLCKKQQQRIEPLCYAG 117
Query: 73 RYL 75
YL
Sbjct: 118 TYL 120
>gi|83578098|ref|NP_010970.2| Rsm18p [Saccharomyces cerevisiae S288c]
gi|239938701|sp|P40033|RSM18_YEAST RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977585|sp|A6ZR01|RSM18_YEAS7 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977653|sp|B3LS63|RSM18_YEAS1 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977654|sp|B5VHI3|RSM18_YEAS6 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|151944762|gb|EDN63021.1| mitochondrial ribosomal small subunit component [Saccharomyces
cerevisiae YJM789]
gi|256271135|gb|EEU06228.1| Rsm18p [Saccharomyces cerevisiae JAY291]
gi|285811678|tpg|DAA07706.1| TPA: Rsm18p [Saccharomyces cerevisiae S288c]
gi|323333837|gb|EGA75227.1| Rsm18p [Saccharomyces cerevisiae AWRI796]
Length = 138
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 97 RILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 138
>gi|149599697|ref|XP_001514339.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 159
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 43 KYSYEDVLLLSQFIRPHGGMLPRRVTGLCQEEHRKIEECVKMAHRAGLL 91
>gi|190405612|gb|EDV08879.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 138
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 97 RILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 138
>gi|156839912|ref|XP_001643642.1| hypothetical protein Kpol_478p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156114261|gb|EDO15784.1| hypothetical protein Kpol_478p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 174
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y + L+ FLS G+I+ ++ +S K QR ++KA++R + +GL+
Sbjct: 110 YSNPEYLSHFLSSTGRILHRDVTGLSVKNQRRMSKAVRRCQAIGLL 155
>gi|13529221|gb|AAH05373.1| Mitochondrial ribosomal protein S18B [Homo sapiens]
Length = 258
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|254457706|ref|ZP_05071134.1| ribosomal protein S18 [Campylobacterales bacterium GD 1]
gi|207086498|gb|EDZ63782.1| ribosomal protein S18 [Campylobacterales bacterium GD 1]
Length = 87
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+DYK++ L LS+R KI+P R++ + Q + IKRAR L+ Y
Sbjct: 22 MDYKEVGALRFSLSERYKIMPRRLTGNCKRHQDMITVVIKRARAAALVPY 71
>gi|311273359|ref|XP_003133826.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 2
[Sus scrofa]
Length = 181
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ ++
Sbjct: 55 CPICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIE 101
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 102 ECVKMAHRAGLL 113
>gi|7662645|ref|NP_054765.1| 28S ribosomal protein S18b, mitochondrial precursor [Homo sapiens]
gi|24212203|sp|Q9Y676|RT18B_HUMAN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|7106756|gb|AAF36103.1|AF151017_1 HSPC183 [Homo sapiens]
gi|5410308|gb|AAD43025.1| PTD017 [Homo sapiens]
gi|46091141|dbj|BAD13699.1| MRPS18B protein [Homo sapiens]
gi|46091143|dbj|BAD13700.1| MRPS18B protein [Homo sapiens]
gi|52545522|emb|CAH56415.1| hypothetical protein [Homo sapiens]
gi|55961380|emb|CAI17840.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|55962484|emb|CAI17765.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|56207230|emb|CAI18569.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|57209799|emb|CAI41878.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|86197951|dbj|BAE78614.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|119623709|gb|EAX03304.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Homo sapiens]
gi|123269908|emb|CAI18162.2| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|123297237|emb|CAM25911.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|162417647|emb|CAP58452.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|168984942|emb|CAQ07411.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|168985991|emb|CAQ09404.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|189053209|dbj|BAG34831.1| unnamed protein product [Homo sapiens]
gi|208966778|dbj|BAG73403.1| mitochondrial ribosomal protein S18B [synthetic construct]
Length = 258
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++++LL +F+ + G I + + V K+ + L +AI++AR GL+
Sbjct: 105 CPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLI 164
Query: 80 Y 80
Y
Sbjct: 165 Y 165
>gi|301757332|ref|XP_002914507.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 196
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 70 CPVCRWNLKHK-------------YGYEDVLLLSQFIRPCGGLLPRRVTGLCQEEHRKIE 116
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 117 ECVKMAHRAGLL 128
>gi|15609192|ref|NP_216571.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Rv]
gi|15841544|ref|NP_336581.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31793238|ref|NP_855731.1| 30S ribosomal protein S18 [Mycobacterium bovis AF2122/97]
gi|121637941|ref|YP_978164.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661869|ref|YP_001283392.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148823271|ref|YP_001288025.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis F11]
gi|167966860|ref|ZP_02549137.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|215411753|ref|ZP_03420549.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 94_M4241A]
gi|215427427|ref|ZP_03425346.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T92]
gi|215430978|ref|ZP_03428897.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|215446273|ref|ZP_03433025.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|218753771|ref|ZP_03532567.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis GM 1503]
gi|219558023|ref|ZP_03537099.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T17]
gi|224990435|ref|YP_002645122.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798888|ref|YP_003031889.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
1435]
gi|254232225|ref|ZP_04925552.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis C]
gi|254364871|ref|ZP_04980917.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551082|ref|ZP_05141529.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187032|ref|ZP_05764506.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CPHL_A]
gi|260201165|ref|ZP_05768656.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|260205340|ref|ZP_05772831.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis K85]
gi|289443558|ref|ZP_06433302.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289447675|ref|ZP_06437419.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CPHL_A]
gi|289554161|ref|ZP_06443371.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
605]
gi|289570166|ref|ZP_06450393.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T17]
gi|289574734|ref|ZP_06454961.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis K85]
gi|289750649|ref|ZP_06510027.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T92]
gi|289754165|ref|ZP_06513543.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|289758175|ref|ZP_06517553.1| ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|289762212|ref|ZP_06521590.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis GM
1503]
gi|294996994|ref|ZP_06802685.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 210]
gi|297634632|ref|ZP_06952412.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN 4207]
gi|297731619|ref|ZP_06960737.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN R506]
gi|298525558|ref|ZP_07012967.1| 30S ribosomal protein S18 2 [Mycobacterium tuberculosis
94_M4241A]
gi|306776293|ref|ZP_07414630.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu001]
gi|306780080|ref|ZP_07418417.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu002]
gi|306784826|ref|ZP_07423148.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu003]
gi|306789189|ref|ZP_07427511.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu004]
gi|306793522|ref|ZP_07431824.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu005]
gi|306797907|ref|ZP_07436209.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu006]
gi|306803784|ref|ZP_07440452.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu008]
gi|306808358|ref|ZP_07445026.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu007]
gi|306968181|ref|ZP_07480842.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu009]
gi|306972408|ref|ZP_07485069.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu010]
gi|307080115|ref|ZP_07489285.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu011]
gi|307084694|ref|ZP_07493807.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu012]
gi|313658953|ref|ZP_07815833.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN V2475]
gi|54038989|sp|P66466|RS182_MYCBO RecName: Full=30S ribosomal protein S18 2
gi|54041925|sp|P66465|RS182_MYCTU RecName: Full=30S ribosomal protein S18 2
gi|205556550|sp|A1KKA1|RS182_MYCBP RecName: Full=30S ribosomal protein S18 2
gi|205556588|sp|A5U480|RS182_MYCTA RecName: Full=30S ribosomal protein S18 2
gi|3242285|emb|CAA17269.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium tuberculosis
H37Rv]
gi|13881790|gb|AAK46395.1| ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31618830|emb|CAD96934.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium bovis
AF2122/97]
gi|121493588|emb|CAL72062.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124601284|gb|EAY60294.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis C]
gi|134150385|gb|EBA42430.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506021|gb|ABQ73830.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148721798|gb|ABR06423.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis F11]
gi|224773548|dbj|BAH26354.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320391|gb|ACT24994.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
1435]
gi|289416477|gb|EFD13717.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289420633|gb|EFD17834.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CPHL_A]
gi|289438793|gb|EFD21286.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
605]
gi|289539165|gb|EFD43743.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis K85]
gi|289543920|gb|EFD47568.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T17]
gi|289691236|gb|EFD58665.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T92]
gi|289694752|gb|EFD62181.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|289709718|gb|EFD73734.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis GM
1503]
gi|289713739|gb|EFD77751.1| ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|298495352|gb|EFI30646.1| 30S ribosomal protein S18 2 [Mycobacterium tuberculosis
94_M4241A]
gi|308215248|gb|EFO74647.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu001]
gi|308326985|gb|EFP15836.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu002]
gi|308330420|gb|EFP19271.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu003]
gi|308334254|gb|EFP23105.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu004]
gi|308338055|gb|EFP26906.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu005]
gi|308341746|gb|EFP30597.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu006]
gi|308345232|gb|EFP34083.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu007]
gi|308349533|gb|EFP38384.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu008]
gi|308354164|gb|EFP43015.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu009]
gi|308358117|gb|EFP46968.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu010]
gi|308362043|gb|EFP50894.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu011]
gi|308365721|gb|EFP54572.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu012]
gi|323719350|gb|EGB28489.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CDC1551A]
gi|326903668|gb|EGE50601.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
W-148]
gi|328458645|gb|AEB04068.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
4207]
Length = 88
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
L G +DYKD L F+S RGKI ++ ++ ++QR++A+AIK AR + L+ Y
Sbjct: 18 LDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75
>gi|327266400|ref|XP_003217994.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Anolis
carolinensis]
Length = 249
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRI-SSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++++LL +F+ I+ I + V KK ++L KAI+++R GL+
Sbjct: 123 CPICRDQNLFLDYRNVKLLEQFVCPYTGIIYHPIHTGVCMKKYKQLTKAIEQSRENGLLF 182
Query: 80 Y 80
+
Sbjct: 183 F 183
>gi|289745992|ref|ZP_06505370.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
02_1987]
gi|289686520|gb|EFD54008.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
02_1987]
Length = 90
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
L G +DYKD L F+S RGKI ++ ++ ++QR++A+AIK AR + L+ Y
Sbjct: 20 LDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 77
>gi|19343853|gb|AAH25456.1| Mrps18a protein [Mus musculus]
Length = 132
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ Y+D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 6 CPICRWNLKHK-------------YTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIE 52
Query: 67 KAIKRARYLGLI 78
+ +K A GL+
Sbjct: 53 ECVKMAHRAGLL 64
>gi|225716778|gb|ACO14235.1| 28S ribosomal protein S18b, mitochondrial precursor [Esox lucius]
Length = 241
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ I +++++LL +F+S G + + V K+Q++L KAI AR GL+A
Sbjct: 121 CPICRDPNIIIHHQNVKLLQQFISPYTGMVYDGTRTGVCEKQQKQLNKAIGAARDHGLLA 180
Query: 80 Y 80
+
Sbjct: 181 F 181
>gi|311260501|ref|XP_003128461.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Sus
scrofa]
Length = 196
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ ++ +
Sbjct: 71 PICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIEE 117
Query: 68 AIKRARYLGLI 78
+K A GL+
Sbjct: 118 CVKMAHRAGLL 128
>gi|307721628|ref|YP_003892768.1| 30S ribosomal protein S18P [Sulfurimonas autotrophica DSM 16294]
gi|306979721|gb|ADN09756.1| SSU ribosomal protein S18P [Sulfurimonas autotrophica DSM 16294]
Length = 87
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK++ L LS+R KI+P R++ + Q + IKRAR L+ Y
Sbjct: 22 MDYKEVASLRFSLSERYKIMPRRLTGNCKRHQDMITVVIKRARAAALVPYT 72
>gi|168003569|ref|XP_001754485.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694587|gb|EDQ80935.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RNV R S L KG R D K I LL F++ +GKIVP IS + + L +A
Sbjct: 387 RNVLVRELSKVL--KGDVRFDDKHINLLADFMTNKGKIVPVNISGMVERGHSYLTRA 441
>gi|25013116|gb|AAN71657.1| SD13983p [Drosophila melanogaster]
Length = 155
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ G
Sbjct: 63 QTKFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAG 121
Query: 77 LI 78
L+
Sbjct: 122 LM 123
>gi|311273357|ref|XP_003133825.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 1
[Sus scrofa]
Length = 196
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ +Y+D+ LL++F+ G ++P RI+ + ++ ++ +
Sbjct: 71 PICRWNLKHK-------------YNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIEE 117
Query: 68 AIKRARYLGLI 78
+K A GL+
Sbjct: 118 CVKMAHRAGLL 128
>gi|239789228|dbj|BAH71251.1| ACYPI003773 [Acyrthosiphon pisum]
Length = 176
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP+ +DY+++ LL +F+S GK++ +++ + K+ L A+K+++ LG+
Sbjct: 118 CPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVAVKKSQRLGI 175
>gi|195330676|ref|XP_002032029.1| GM26335 [Drosophila sechellia]
gi|194120972|gb|EDW43015.1| GM26335 [Drosophila sechellia]
Length = 155
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
>gi|255948116|ref|XP_002564825.1| Pc22g08090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591842|emb|CAP98097.1| Pc22g08090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 193
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ +++ G+I P ++ + QR++AKA++RA +GL+ V+
Sbjct: 124 YKNFSVMSEYMTSMGRIKPRSVTGLRPVNQRKIAKALRRAIGMGLMPSVH 173
>gi|195572533|ref|XP_002104250.1| GD20860 [Drosophila simulans]
gi|194200177|gb|EDX13753.1| GD20860 [Drosophila simulans]
Length = 155
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
>gi|24645087|ref|NP_731252.1| mitochondrial ribosomal protein S18A [Drosophila melanogaster]
gi|23170711|gb|AAF54251.3| mitochondrial ribosomal protein S18A [Drosophila melanogaster]
gi|189181797|gb|ACD81675.1| FI06460p [Drosophila melanogaster]
Length = 155
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
>gi|195499133|ref|XP_002096819.1| GE24843 [Drosophila yakuba]
gi|194182920|gb|EDW96531.1| GE24843 [Drosophila yakuba]
Length = 155
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
>gi|309358170|emb|CAP34545.2| hypothetical protein CBG_16627 [Caenorhabditis briggsae AF16]
Length = 945
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
C L P ++ YKD+ +L +F+ G ++P +++ + K+Q L + + +A + GL
Sbjct: 66 CSLCTCNVPVKLSYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRLERCVMQAFWSGL 123
>gi|197128057|gb|ACH44555.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
gi|197128058|gb|ACH44556.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
Length = 190
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ DY D+ LL++F+ G ++P R++ + ++ +++A
Sbjct: 65 CPICRWNLKHK-------------YDYVDVLLLSQFIRSDGGMLPRRVTGLCLEEHKKVA 111
Query: 67 KAIKRARYLGLI 78
++ A GL+
Sbjct: 112 VCVQMAHRAGLL 123
>gi|311262875|ref|XP_003129404.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Sus
scrofa]
Length = 166
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 38 LLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
LL++F+S G I I+ + KKQ+E+ KAIKRA+ LG +
Sbjct: 103 LLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGFM 144
>gi|224047599|ref|XP_002187655.1| PREDICTED: putative mitochondrial ribosomal protein S18A
[Taeniopygia guttata]
Length = 175
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R N+ H+ DY D+ LL++F+ G ++P R++ + ++ +++A
Sbjct: 50 CPICRWNLKHK-------------YDYVDVLLLSQFIRSDGGMLPRRVTGLCLEEHKKVA 96
Query: 67 KAIKRARYLGLI 78
++ A GL+
Sbjct: 97 VCVQMAHRAGLL 108
>gi|194903850|ref|XP_001980951.1| GG17441 [Drosophila erecta]
gi|190652654|gb|EDV49909.1| GG17441 [Drosophila erecta]
Length = 155
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
>gi|255575892|ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223531694|gb|EEF33517.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 271
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ D +++R L+ F+++ G + + +S K QR++A IK AR GL+ + +
Sbjct: 179 KADSRNVRFLSNFITEAGIMHKRSKTKISAKAQRKVAGEIKTARAFGLMPFTTM 232
>gi|226372256|gb|ACO51753.1| 28S ribosomal protein S18b, mitochondrial precursor [Rana
catesbeiana]
Length = 222
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIV--PSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ +DY++IRLL +F+ +V P++ + V ++ ++L KAI A+ GL+
Sbjct: 100 CPICRDQKLHVDYRNIRLLEQFICSHTGVVHDPTK-TGVCMEQYKKLVKAISDAQEHGLL 158
Query: 79 A 79
Sbjct: 159 T 159
>gi|328769072|gb|EGF79117.1| hypothetical protein BATDEDRAFT_90157 [Batrachochytrium
dendrobatidis JAM81]
Length = 171
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
P +Y+++ +L+ F++ G I P + ++ + QR +++AIKRAR + L
Sbjct: 103 PIKEYRNVNMLSHFITAIGHIKPRHKTGLTLENQRRVSRAIKRARAMDL 151
>gi|229365530|dbj|BAH58016.1| ribosomal protein S18 [Pinus cembroides]
Length = 39
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 GKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFI 35
>gi|147905850|ref|NP_001090044.1| mitochondrial ribosomal protein S18A [Xenopus laevis]
gi|66911557|gb|AAH97747.1| MGC115435 protein [Xenopus laevis]
Length = 195
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ R N+ H+ Y D+ LL++F+ G ++P R++ + ++ R++
Sbjct: 70 PICRWNLKHK-------------YTYTDVLLLSQFIRSDGGMLPRRVTGLCMEEHRKVET 116
Query: 68 AIKRARYLGLI 78
+K A GL+
Sbjct: 117 CVKMAHRAGLL 127
>gi|209730750|gb|ACI66244.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
Length = 210
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ +Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 93 KYNYTDVLLLSQFIRSDGGMLPRRVTGLCAQEHRKIAICVQMAHRAGLL 141
>gi|325114570|emb|CBZ50126.1| putative ribosomal protein S18 domain containing protein [Neospora
caninum Liverpool]
Length = 329
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 30 RIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
R+ Y D+ +L+ F+ + G I+P R + S +QR + KAI AR + L Y
Sbjct: 174 RVHYATDLHILHHFVGENGLILPRRTTHASRYQQRCIFKAICMARRMALFPY 225
>gi|315041276|ref|XP_003170015.1| hypothetical protein MGYG_08194 [Arthroderma gypseum CBS 118893]
gi|311345977|gb|EFR05180.1| hypothetical protein MGYG_08194 [Arthroderma gypseum CBS 118893]
Length = 179
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++S+ G+I +R + + QR+L+KAI+RA +GL+ V+
Sbjct: 118 YKNPAVMSEYVSETGRIKSARETGLRRINQRKLSKAIRRAVSMGLMPSVH 167
>gi|159473847|ref|XP_001695045.1| mitochondrial ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|158276424|gb|EDP02197.1| mitochondrial ribosomal protein S18 [Chlamydomonas reinhardtii]
Length = 278
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 30 RIDYKDIRLLNR-FLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+ DYK++ L R FLS G+++P R + + + +++ ++ AR++GLIA
Sbjct: 202 KADYKNVAFLTRWFLSPAGRLLPRRQTRLPVAVHKHVSRQVRLARHMGLIA 252
>gi|67900924|ref|XP_680718.1| hypothetical protein AN7449.2 [Aspergillus nidulans FGSC A4]
gi|40742839|gb|EAA62029.1| hypothetical protein AN7449.2 [Aspergillus nidulans FGSC A4]
gi|259483754|tpe|CBF79404.1| TPA: 37S ribosomal protein S18, putative (AFU_orthologue;
AFUA_2G06030) [Aspergillus nidulans FGSC A4]
Length = 191
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ +++ G+I +++ + QR+LAKAI+RA +GL+ V+
Sbjct: 125 YKNFSIMSEYMTDMGRIKHRKVTGLRGVNQRKLAKAIRRAIGVGLMPSVH 174
>gi|47224220|emb|CAG09066.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
A P+ R N+ H+ +Y D+ LL++F+ G ++P RI+ + ++ R
Sbjct: 78 TAKCPIYRWNLQHK-------------YNYTDVLLLSQFIRSDGGMLPRRITGLCPEEHR 124
Query: 64 ELAKAIKRARYLGLI 78
++ ++ A GL+
Sbjct: 125 KITICVQMAHRAGLL 139
>gi|320166617|gb|EFW43516.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 266
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHK 60
++K CP+ G +DYK+I L++FLS+ G I+P +++ SH+
Sbjct: 195 KKKLCPVCSTGI-VVDYKNIAFLSQFLSKHTGSILPRSVTARSHE 238
>gi|189239497|ref|XP_975515.2| PREDICTED: similar to mitochondrial ribosomal protein S18A
[Tribolium castaneum]
Length = 146
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 2 AEVAPT---PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
A++ P+ P L +N CP+ G I + D+ +L++F+ G ++P R++ +
Sbjct: 48 AQILPSGREPFLLQNA--HSSCCPVCASGL-DIKHTDVLILSQFVRSDGCMLPRRVTGLC 104
Query: 59 HKKQRELAKAIKRARYLG 76
K+Q+ ++ + A G
Sbjct: 105 KKQQKRMSSLVTMAHKAG 122
>gi|225704502|gb|ACO08097.1| 28S ribosomal protein S18a, mitochondrial precursor [Oncorhynchus
mykiss]
Length = 210
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ +Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 93 KYNYTDVLLLSQFIRSDGGMLPRRVTGLCAQEHRKIAICVQMAHRAGLL 141
>gi|170060975|ref|XP_001866038.1| mitochondrial ribosomal protein S18A [Culex quinquefasciatus]
gi|167879275|gb|EDS42658.1| mitochondrial ribosomal protein S18A [Culex quinquefasciatus]
Length = 164
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP G I + D+ +L+++L G ++P RI+ + ++QR + + A+ GL+
Sbjct: 76 CPQCTLGLD-IKHTDVLILSQYLRSDGCMLPRRITGLCKRQQRRMTALVTMAQKAGLMPN 134
Query: 81 VN 82
+N
Sbjct: 135 IN 136
>gi|242023330|ref|XP_002432087.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517461|gb|EEB19349.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 143
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 32 DYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
D++++RLL++F+S+ GK+ I+ + KQ+++ K I +AR L+
Sbjct: 68 DFRNVRLLSQFISRHTGKVYGRHITGLCEHKQKQVEKEIIKARCCWLM 115
>gi|330822490|ref|XP_003291684.1| hypothetical protein DICPUDRAFT_82347 [Dictyostelium purpureum]
gi|325078120|gb|EGC31789.1| hypothetical protein DICPUDRAFT_82347 [Dictyostelium purpureum]
Length = 751
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ +C L +D ++ L +++ G ++P S K Q+++AK K A+ LG
Sbjct: 583 KHSNCLLCKDPNWELDPLNVPFLTLYVTTEGDLLPRAFSGNCLKHQKKIAKTFKHAKSLG 642
Query: 77 LIAYVN 82
L Y N
Sbjct: 643 LFNYKN 648
>gi|6520744|dbj|BAA88031.1| 50S ribosomal protein L20 [Abies fabri]
gi|6520753|dbj|BAA88033.1| 50S ribosomal protein L20 [Abies fargesii]
gi|6520763|dbj|BAA88035.1| 50S ribosomal protein L20 [Abies firma]
gi|6520766|dbj|BAA88037.1| 50S ribosomal protein L20 [Abies fraseri]
gi|6520769|dbj|BAA88039.1| 50S ribosomal protein L20 [Abies holophylla]
gi|6520772|dbj|BAA88041.1| 50S ribosomal protein L20 [Abies homolepis]
gi|6520775|dbj|BAA88043.1| 50S ribosomal protein L20 [Abies koreana]
gi|6520784|dbj|BAA88045.1| 50S ribosomal protein L20 [Abies lasiocarpa]
gi|6520790|dbj|BAA88047.1| 50S ribosomal protein L20 [Abies mariesii]
gi|6520793|dbj|BAA88049.1| 50S ribosomal protein L20 [Abies nephrolepis]
gi|6520796|dbj|BAA88051.1| 50S ribosomal protein L20 [Abies sachalinensis]
gi|6520799|dbj|BAA88053.1| 50S ribosomal protein L20 [Abies sibirica]
gi|6520802|dbj|BAA88055.1| 50S ribosomal protein L20 [Abies veitchii]
gi|86755739|gb|ABD15113.1| ribosomal protein S18 [Pinus taeda]
gi|86755754|gb|ABD15115.1| ribosomal protein S18 [Pinus monticola]
gi|86755772|gb|ABD15117.1| ribosomal protein S18 [Pinus nelsonii]
gi|229365518|dbj|BAH58008.1| ribosomal protein S18 [Pinus flexilis]
gi|229365521|dbj|BAH58010.1| ribosomal protein S18 [Pinus strobiformis]
gi|229365524|dbj|BAH58012.1| ribosomal protein S18 [Pinus albicaulis]
gi|229365527|dbj|BAH58014.1| ribosomal protein S18 [Pinus sibirica]
Length = 39
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 GKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 35
>gi|270011201|gb|EFA07649.1| hypothetical protein TcasGA2_TC030560 [Tribolium castaneum]
Length = 152
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 2 AEVAPT---PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
A++ P+ P L +N CP+ G I + D+ +L++F+ G ++P R++ +
Sbjct: 48 AQILPSGREPFLLQNA--HSSCCPVCASGL-DIKHTDVLILSQFVRSDGCMLPRRVTGLC 104
Query: 59 HKKQRELAKAIKRARYLG 76
K+Q+ ++ + A G
Sbjct: 105 KKQQKRMSSLVTMAHKAG 122
>gi|66825809|ref|XP_646259.1| hypothetical protein DDB_G0269762 [Dictyostelium discoideum AX4]
gi|60474294|gb|EAL72231.1| hypothetical protein DDB_G0269762 [Dictyostelium discoideum AX4]
Length = 824
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
++D + L+ +L++ G ++P S K Q+++ K I++A+ LG+ +Y N
Sbjct: 684 QVDPLNTPFLSIYLNKAGDMLPRHFSGNCLKHQKKIVKTIRQAKSLGIFSYKN 736
>gi|296416053|ref|XP_002837695.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633578|emb|CAZ81886.1| unnamed protein product [Tuber melanosporum]
Length = 202
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
C L G P +YK+ +L+ ++++ G+I S + + QR +AKAI+RA LG +
Sbjct: 118 CDLVGIN-PVKEYKNFCMLSEYVTEMGRIKHSSETGLRPVNQRRMAKAIRRAIALGFM 174
>gi|74207728|dbj|BAE40107.1| unnamed protein product [Mus musculus]
Length = 254
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 31 IDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+D+++++LL +F+ + G I + + V K+ ++L +AI++AR GL++Y
Sbjct: 113 VDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLSY 163
>gi|315273287|ref|ZP_07869272.1| ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|313616095|gb|EFR89226.1| ribosomal protein S18 [Listeria marthii FSL S4-120]
Length = 38
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 48 KIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
KI+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 1 KILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 34
>gi|50290789|ref|XP_447827.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527138|emb|CAG60776.1| unnamed protein product [Candida glabrata]
Length = 160
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+L+ ++ GKI+ ++ +S K QR +AKAI+R + +GL++
Sbjct: 109 ILSYYVGSTGKILHRDVTGLSAKNQRRMAKAIRRCQAIGLMS 150
>gi|116180092|ref|XP_001219895.1| hypothetical protein CHGG_00674 [Chaetomium globosum CBS 148.51]
gi|88184971|gb|EAQ92439.1| hypothetical protein CHGG_00674 [Chaetomium globosum CBS 148.51]
Length = 236
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+P +YK+ L++ F++ G+I S + + QR++AKA++RA +GL V+
Sbjct: 153 SPLDNYKNFSLISEFVTPMGRIRHSNDTGLRPVNQRKIAKAVRRAIGMGLHPSVH 207
>gi|312385727|gb|EFR30153.1| hypothetical protein AND_00411 [Anopheles darlingi]
Length = 161
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L+++L G ++P R++ + ++QR + + A+ GL+
Sbjct: 71 KFCPQCTLGL-DIKHTDVLILSQYLRSDGCMLPRRVTGLCKRQQRRIGAMVTMAQKAGLM 129
Query: 79 AYVN 82
+N
Sbjct: 130 PNLN 133
>gi|209736012|gb|ACI68875.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
gi|303659577|gb|ADM15963.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
Length = 210
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ +Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 93 KYNYTDVLLLSQFIRSDGGMLPRRVTGLCAQEYRKIAICVQMAHRAGLL 141
>gi|153816337|ref|ZP_01969005.1| hypothetical protein RUMTOR_02589 [Ruminococcus torques ATCC
27756]
gi|145846298|gb|EDK23216.1| hypothetical protein RUMTOR_02589 [Ruminococcus torques ATCC
27756]
Length = 71
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIV 50
R+K C GK I+YKD+ L +++S+RGK
Sbjct: 22 RKKVCVFCGKENNEINYKDVAKLKKYVSERGKFF 55
>gi|6683437|dbj|BAA89193.1| ribosomal protein S18 [Picea abies]
Length = 43
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L+ ++
Sbjct: 1 ISEQGKILSGRVNRLTSKQQRLITNAIKRARIPSLLPFL 39
>gi|320580067|gb|EFW94290.1| Mitochondrial ribosomal protein of the small subunit [Pichia
angusta DL-1]
Length = 136
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 29/43 (67%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++L++++S G I ++ + HKKQ+++ +AIKRA G ++
Sbjct: 78 KVLSQYMSVTGNIHHRSVTQLQHKKQQQMTRAIKRAIQAGFLS 120
>gi|158291025|ref|XP_312545.3| AGAP002407-PA [Anopheles gambiae str. PEST]
gi|157018176|gb|EAA44943.3| AGAP002407-PA [Anopheles gambiae str. PEST]
Length = 161
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 2 AEVAPTP----LLRRNVSHRRKS---CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRI 54
E P+P L+ + + R+K CP G I + D+ +L++++ G ++P RI
Sbjct: 47 GEYVPSPRQDTLIPQLLEARQKGERFCPQCTLGL-EIKHTDVLILSQYVRSDGCMLPRRI 105
Query: 55 SSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + ++QR + + A+ GL+ +N
Sbjct: 106 TGLCKRQQRRMGALVTMAQKAGLMPNLN 133
>gi|168010051|ref|XP_001757718.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690994|gb|EDQ77358.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 865
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RNV R S L KG R D K I LL F++ +GK++P IS + + L +A
Sbjct: 764 RNVLVRELSKVL--KGDVRFDDKHINLLADFMTNKGKMIPMNISGMVERGHSYLTRA 818
>gi|18313835|ref|NP_560502.1| hypothetical protein PAE3116 [Pyrobaculum aerophilum str. IM2]
gi|18161398|gb|AAL64684.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 293
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+L+ + L++RG + + IS+V+ QR + A+KR R +GL+
Sbjct: 236 QLIRKVLAERGPLTVAEISAVTKLSQRTVRNALKRLREMGLV 277
>gi|123371108|ref|XP_001297372.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121877491|gb|EAX84442.1| hypothetical protein TVAG_264890 [Trichomonas vaginalis G3]
Length = 305
Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKI-VPSRISSVSHKKQRELAK 67
+L + H RK CPL + R+ I N + R KI VPSR ++ +++K + +K
Sbjct: 206 VLNNAIVHARKQCPLLNELMNRVHQIIIIFKNHDMRARYKIRVPSR-NNKNYRKSDKTSK 264
Query: 68 AIKRARYLGLIAYVNL 83
+ +++L LI + N+
Sbjct: 265 TGRESQFLLLILFYNI 280
>gi|156101790|ref|XP_001616588.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148805462|gb|EDL46861.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 413
Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++ LL+ F+ + G I+P +I+ + K+Q ++ KAI AR + L Y
Sbjct: 253 WRHTHLLHHFIGENGLILPRKINFTTRKQQIQIFKAICVARRMALYPY 300
>gi|221059952|ref|XP_002260621.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193810695|emb|CAQ42593.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 422
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++ LL+ F+ + G I+P +I+ + K+Q ++ KAI AR + L Y
Sbjct: 252 WRHTHLLHHFIGENGLILPRKINFTTRKQQIQIFKAICVARRMALYPY 299
>gi|331219942|ref|XP_003322647.1| hypothetical protein PGTG_04184 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301637|gb|EFP78228.1| hypothetical protein PGTG_04184 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 171
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
LL F++ G+I ++ +S Q++++KAI+RAR +G + Y
Sbjct: 101 LLANFITPLGRIKKRALTGLSKGNQKKVSKAIRRARCMGFLPYF 144
Searching..................................................done
Results from round 2
>gi|323142969|ref|ZP_08077677.1| ribosomal protein S18 [Succinatimonas hippei YIT 12066]
gi|322417242|gb|EFY07868.1| ribosomal protein S18 [Succinatimonas hippei YIT 12066]
Length = 76
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
HRRK C + +G IDYKD+ LL ++++ GKIVPSRI+ S K QR+LA AIKRA
Sbjct: 3 RYFHRRKFCRFTAEGVTEIDYKDVALLKNYVTESGKIVPSRITGTSAKYQRQLATAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|259047889|ref|ZP_05738290.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
gi|259035566|gb|EEW36821.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
Length = 80
Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C IDYKD+ LL R++S++GKI+P R++ K QR L AIKRAR +GL
Sbjct: 14 KKVCYFCANHVDYIDYKDVELLKRYISEKGKILPRRVTGTCAKHQRTLTVAIKRARIMGL 73
Query: 78 IAYVNL 83
+ + +
Sbjct: 74 LPFTTV 79
>gi|294102403|ref|YP_003554261.1| ribosomal protein S18 [Aminobacterium colombiense DSM 12261]
gi|293617383|gb|ADE57537.1| ribosomal protein S18 [Aminobacterium colombiense DSM 12261]
Length = 87
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R K C +DYKD+ L +++S+RGKI+P R++ K QR+L AIK
Sbjct: 15 RRGGKRRPKVCFYCVDKIDYVDYKDVERLRKYISERGKIMPRRVTGNCAKHQRQLTTAIK 74
Query: 71 RARYLGLIAY 80
RAR++ L+ Y
Sbjct: 75 RARFMALLPY 84
>gi|212640664|ref|YP_002317184.1| 30S ribosomal protein S18 [Anoxybacillus flavithermus WK1]
gi|212562144|gb|ACJ35199.1| Ribosomal protein S18 [Anoxybacillus flavithermus WK1]
Length = 84
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G IDYKD+ L +F+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 14 RTKRRKVCYFTANGITHIDYKDVDTLKKFISERGKILPRRVTGTSAKYQRKLTIAIKRAR 73
Query: 74 YLGLIAYV 81
+ L+ YV
Sbjct: 74 QMALLPYV 81
>gi|289551779|ref|YP_003472683.1| SSU ribosomal protein S18p [Staphylococcus lugdunensis HKU09-01]
gi|315660049|ref|ZP_07912907.1| 30S ribosomal protein S18 [Staphylococcus lugdunensis M23590]
gi|289181310|gb|ADC88555.1| SSU ribosomal protein S18p [Staphylococcus lugdunensis HKU09-01]
gi|315494950|gb|EFU83287.1| 30S ribosomal protein S18 [Staphylococcus lugdunensis M23590]
Length = 80
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|224475522|ref|YP_002633128.1| 30S ribosomal protein S18 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254812955|sp|B9DIC0|RS18_STACT RecName: Full=30S ribosomal protein S18
gi|222420129|emb|CAL26943.1| 30S ribosomal protein S18 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 80
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTDLLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|241888999|ref|ZP_04776303.1| ribosomal protein S18 [Gemella haemolysans ATCC 10379]
gi|241864248|gb|EER68626.1| ribosomal protein S18 [Gemella haemolysans ATCC 10379]
Length = 82
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNVEFIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|70727625|ref|YP_254541.1| 30S ribosomal protein S18 [Staphylococcus haemolyticus JCSC1435]
gi|228474191|ref|ZP_04058928.1| ribosomal protein S18 [Staphylococcus hominis SK119]
gi|314935171|ref|ZP_07842524.1| ribosomal protein S18 [Staphylococcus hominis subsp. hominis C80]
gi|123762271|sp|Q4L342|RS18_STAHJ RecName: Full=30S ribosomal protein S18
gi|68448351|dbj|BAE05935.1| 30S ribosomal protein S18 [Staphylococcus haemolyticus JCSC1435]
gi|228271886|gb|EEK13223.1| ribosomal protein S18 [Staphylococcus hominis SK119]
gi|313656506|gb|EFS20245.1| ribosomal protein S18 [Staphylococcus hominis subsp. hominis C80]
Length = 80
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|240144659|ref|ZP_04743260.1| ribosomal protein S18 [Roseburia intestinalis L1-82]
gi|257203299|gb|EEV01584.1| ribosomal protein S18 [Roseburia intestinalis L1-82]
gi|291537110|emb|CBL10222.1| SSU ribosomal protein S18P [Roseburia intestinalis M50/1]
gi|291540345|emb|CBL13456.1| SSU ribosomal protein S18P [Roseburia intestinalis XB6B4]
Length = 87
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A+ P+ RR + R+K C G IDYKD L R++S+RGKI+P RI+ K
Sbjct: 7 ADKDGAPMKRRPMHRRKKVCVFCG-KDNVIDYKDTNKLKRYISERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ YV
Sbjct: 66 QRALTVAIKRARHVALMPYV 85
>gi|317496133|ref|ZP_07954493.1| ribosomal protein S18 [Gemella moribillum M424]
gi|329768685|ref|ZP_08260169.1| 30S ribosomal protein S18 [Gemella haemolysans M341]
gi|316913708|gb|EFV35194.1| ribosomal protein S18 [Gemella moribillum M424]
gi|328836399|gb|EGF86064.1| 30S ribosomal protein S18 [Gemella haemolysans M341]
Length = 82
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNVEFIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|56965862|ref|YP_177596.1| 30S ribosomal protein S18 [Bacillus clausii KSM-K16]
gi|59798604|sp|Q5WAH5|RS18_BACSK RecName: Full=30S ribosomal protein S18
gi|56912108|dbj|BAD66636.1| 30S ribosomal protein S18 [Bacillus clausii KSM-K16]
Length = 77
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + IDYKD+ LL RF+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCFFTANKITHIDYKDVDLLKRFISERGKILPRRVTGTSAKYQRKLTVA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YVN
Sbjct: 61 IKRARQVALLPYVN 74
>gi|282855813|ref|ZP_06265115.1| ribosomal protein S18 [Pyramidobacter piscolens W5455]
gi|282586327|gb|EFB91593.1| ribosomal protein S18 [Pyramidobacter piscolens W5455]
Length = 82
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 8 PLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ +R RR K C +DYKD+ L +++S+RGKI+P R++ K QR+L
Sbjct: 6 PMRKRGGGKRRPKVCFFCVDKLDEVDYKDVERLKKYVSERGKIIPRRVTGNCAKHQRQLT 65
Query: 67 KAIKRARYLGLIAYV 81
A+KRAR++ L+ Y
Sbjct: 66 IAVKRARFMALLPYT 80
>gi|148653438|ref|YP_001280531.1| 30S ribosomal protein S18 [Psychrobacter sp. PRwf-1]
gi|172048535|sp|A5WFZ0|RS18_PSYWF RecName: Full=30S ribosomal protein S18
gi|148572522|gb|ABQ94581.1| SSU ribosomal protein S18P [Psychrobacter sp. PRwf-1]
gi|332971480|gb|EGK10431.1| 50S ribosomal protein L21 [Psychrobacter sp. 1501(2011)]
Length = 75
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL +++S GKIVPSRI+ S+K QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSNKYQRQLATAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|27469288|ref|NP_765925.1| 30S ribosomal protein S18 [Staphylococcus epidermidis ATCC 12228]
gi|57865985|ref|YP_187646.1| 30S ribosomal protein S18 [Staphylococcus epidermidis RP62A]
gi|223043454|ref|ZP_03613500.1| ribosomal protein S18 [Staphylococcus capitis SK14]
gi|242372656|ref|ZP_04818230.1| 30S ribosomal protein S18 [Staphylococcus epidermidis M23864:W1]
gi|282874664|ref|ZP_06283546.1| ribosomal protein S18 [Staphylococcus epidermidis SK135]
gi|314935023|ref|ZP_07842382.1| ribosomal protein S18 [Staphylococcus caprae C87]
gi|38258566|sp|Q8CQP6|RS18_STAES RecName: Full=30S ribosomal protein S18
gi|71153728|sp|Q5HRZ3|RS18_STAEQ RecName: Full=30S ribosomal protein S18
gi|27316838|gb|AAO06013.1|AE016752_46 30S ribosomal protein S18 [Staphylococcus epidermidis ATCC 12228]
gi|57636643|gb|AAW53431.1| ribosomal protein S18 [Staphylococcus epidermidis RP62A]
gi|222443243|gb|EEE49342.1| ribosomal protein S18 [Staphylococcus capitis SK14]
gi|242349573|gb|EES41174.1| 30S ribosomal protein S18 [Staphylococcus epidermidis M23864:W1]
gi|281296588|gb|EFA89100.1| ribosomal protein S18 [Staphylococcus epidermidis SK135]
gi|313652953|gb|EFS16716.1| ribosomal protein S18 [Staphylococcus caprae C87]
gi|319399801|gb|EFV88049.1| ribosomal protein S18 [Staphylococcus epidermidis FRI909]
gi|329723856|gb|EGG60383.1| ribosomal protein S18 [Staphylococcus epidermidis VCU144]
gi|329734384|gb|EGG70698.1| ribosomal protein S18 [Staphylococcus epidermidis VCU028]
gi|329736079|gb|EGG72352.1| ribosomal protein S18 [Staphylococcus epidermidis VCU045]
Length = 80
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|239828694|ref|YP_002951318.1| 30S ribosomal protein S18 [Geobacillus sp. WCH70]
gi|295402141|ref|ZP_06812100.1| ribosomal protein S18 [Geobacillus thermoglucosidasius C56-YS93]
gi|312112738|ref|YP_003991054.1| ribosomal protein S18 [Geobacillus sp. Y4.1MC1]
gi|259494811|sp|C5D9X4|RS18_GEOSW RecName: Full=30S ribosomal protein S18
gi|239808987|gb|ACS26052.1| ribosomal protein S18 [Geobacillus sp. WCH70]
gi|294975824|gb|EFG51443.1| ribosomal protein S18 [Geobacillus thermoglucosidasius C56-YS93]
gi|311217839|gb|ADP76443.1| ribosomal protein S18 [Geobacillus sp. Y4.1MC1]
Length = 78
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 8 RAKRRKVCYFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRAR 67
Query: 74 YLGLIAYV 81
+ L+ YV
Sbjct: 68 QMALLPYV 75
>gi|15616610|ref|NP_244916.1| 30S ribosomal protein S18 [Bacillus halodurans C-125]
gi|11387101|sp|Q9K5P0|RS18_BACHD RecName: Full=30S ribosomal protein S18
gi|10176673|dbj|BAB07767.1| 30S ribosomal protein S18 [Bacillus halodurans C-125]
Length = 77
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD+ LL +F+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCYFTVNKIEKIDYKDVDLLKKFVSERGKILPRRVTGTSAKYQRQLTTA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YV
Sbjct: 61 IKRARQIALLPYVT 74
>gi|71065895|ref|YP_264622.1| 30S ribosomal protein S18 [Psychrobacter arcticus 273-4]
gi|93005859|ref|YP_580296.1| 30S ribosomal protein S18 [Psychrobacter cryohalolentis K5]
gi|123264648|sp|Q1QBZ1|RS18_PSYCK RecName: Full=30S ribosomal protein S18
gi|123748116|sp|Q4FS20|RS18_PSYA2 RecName: Full=30S ribosomal protein S18
gi|71038880|gb|AAZ19188.1| SSU ribosomal protein S18P [Psychrobacter arcticus 273-4]
gi|92393537|gb|ABE74812.1| SSU ribosomal protein S18P [Psychrobacter cryohalolentis K5]
Length = 76
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL +++S GKIVPSRI+ S K QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGITHIDYKDVELLKQYISDNGKIVPSRITGTSTKYQRQLATAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|319891325|ref|YP_004148200.1| SSU ribosomal protein S18p [Staphylococcus pseudintermedius
HKU10-03]
gi|317161021|gb|ADV04564.1| SSU ribosomal protein S18p [Staphylococcus pseudintermedius
HKU10-03]
gi|323465518|gb|ADX77671.1| ribosomal protein S18 [Staphylococcus pseudintermedius ED99]
Length = 80
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 72
Query: 78 IAYV 81
+ +V
Sbjct: 73 LPFV 76
>gi|329769493|ref|ZP_08260903.1| 30S ribosomal protein S18 [Gemella sanguinis M325]
gi|328838708|gb|EGF88306.1| 30S ribosomal protein S18 [Gemella sanguinis M325]
Length = 82
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL +F+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 15 KKVCYFTKNNIETIDYKDVELLKKFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 74
Query: 78 IAYV 81
+ YV
Sbjct: 75 LPYV 78
>gi|308048250|ref|YP_003911816.1| 30S ribosomal protein S18P [Ferrimonas balearica DSM 9799]
gi|307630440|gb|ADN74742.1| SSU ribosomal protein S18P [Ferrimonas balearica DSM 9799]
Length = 75
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVTEIDYKDIATLKNYVTESGKIVPSRITGTSAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|295112204|emb|CBL28954.1| SSU ribosomal protein S18P [Synergistetes bacterium SGP1]
Length = 92
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP +RR R K C + ++DYKD+ L +++S+RGKIVP R++ K QR
Sbjct: 14 APRGGMRRGSKRRPKFCYYCVEKQEKVDYKDVEKLRKYISERGKIVPRRVTGNCAKHQRL 73
Query: 65 LAKAIKRARYLGLIAY 80
L +AIKRARY+ L+ Y
Sbjct: 74 LTEAIKRARYMALLPY 89
>gi|291561870|emb|CBL40671.1| SSU ribosomal protein S18P [butyrate-producing bacterium SS3/4]
Length = 88
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 2 AEVAPTPLLRRN-VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ + + +RR + R+K C G IDYKD+ L R++S+RGKI+P RI+ K
Sbjct: 6 GDKSDSSRVRRGGMHRRKKVCVFCGDKNGEIDYKDVNKLKRYVSERGKILPRRITGNCAK 65
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ Y
Sbjct: 66 HQRALTVAIKRARHIALMPYT 86
>gi|254448156|ref|ZP_05061619.1| ribosomal protein S18 [gamma proteobacterium HTCC5015]
gi|198262282|gb|EDY86564.1| ribosomal protein S18 [gamma proteobacterium HTCC5015]
Length = 74
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C + +G +IDYKD LL +++++ GKIVPSRI+ S K QR+LAKAIKRAR
Sbjct: 4 YFRRRKYCRFTAEGITQIDYKDTDLLKQYITETGKIVPSRITGTSAKYQRQLAKAIKRAR 63
Query: 74 YLGLIAYVN 82
Y+ L+ Y +
Sbjct: 64 YVALLPYSD 72
>gi|320537662|ref|ZP_08037595.1| ribosomal protein S18 [Treponema phagedenis F0421]
gi|320145503|gb|EFW37186.1| ribosomal protein S18 [Treponema phagedenis F0421]
Length = 102
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ + +R+K C + IDYKD L RF+++RGKI+P RI+ K QR+LA IK
Sbjct: 30 KNKLFYRKKVCRFCSQKIK-IDYKDPDALRRFITERGKILPRRITGTCAKHQRKLATEIK 88
Query: 71 RARYLGLIAYV 81
RAR L L+ +V
Sbjct: 89 RARALALLPFV 99
>gi|152977671|ref|YP_001377188.1| 30S ribosomal protein S18 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189029666|sp|A7GVN5|RS18_BACCN RecName: Full=30S ribosomal protein S18
gi|152026423|gb|ABS24193.1| ribosomal protein S18 [Bacillus cytotoxicus NVH 391-98]
Length = 77
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 46/69 (66%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 8 RAKRRKVCFFTANGITHIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRAR 67
Query: 74 YLGLIAYVN 82
+ L+ YV
Sbjct: 68 QMALLPYVG 76
>gi|300087857|ref|YP_003758379.1| 30S ribosomal protein S18 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527590|gb|ADJ26058.1| ribosomal protein S18 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 153
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 39/65 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C IDYKD L+R++S+RGKI P R S K QR LA AIK+AR +
Sbjct: 27 RRKVCAFCADKNLVIDYKDTARLSRYISERGKINPRRRSGTCAKHQRALANAIKQARMIA 86
Query: 77 LIAYV 81
L+ +V
Sbjct: 87 LLPFV 91
>gi|229824647|ref|ZP_04450716.1| hypothetical protein GCWU000282_01994 [Catonella morbi ATCC
51271]
gi|229786018|gb|EEP22132.1| hypothetical protein GCWU000282_01994 [Catonella morbi ATCC
51271]
Length = 81
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ LL RF+S++GKI+P R++ K QR L AIKRAR +GL+
Sbjct: 16 KVCFFCANHIDHPDYKDVDLLKRFISEKGKILPRRVTGTCAKHQRALTVAIKRARIMGLL 75
Query: 79 AYV 81
+
Sbjct: 76 PFT 78
>gi|304312012|ref|YP_003811610.1| 30S ribosomal protein S18 [gamma proteobacterium HdN1]
gi|301797745|emb|CBL45967.1| 30S ribosomal protein S18 [gamma proteobacterium HdN1]
Length = 75
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL ++++ GKIVPSRI+ S + QR+LA A+KRA
Sbjct: 3 RFYRRRKFCRFTAEGVQEIDYKDLELLKNYITETGKIVPSRITGTSARYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYTD 72
>gi|229014638|ref|ZP_04171752.1| 30S ribosomal protein S18 [Bacillus mycoides DSM 2048]
gi|229020697|ref|ZP_04177424.1| 30S ribosomal protein S18 [Bacillus cereus AH1273]
gi|229026913|ref|ZP_04183236.1| 30S ribosomal protein S18 [Bacillus cereus AH1272]
gi|229065131|ref|ZP_04200424.1| 30S ribosomal protein S18 [Bacillus cereus AH603]
gi|229106064|ref|ZP_04236679.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-28]
gi|229136297|ref|ZP_04265044.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST196]
gi|229176148|ref|ZP_04303640.1| 30S ribosomal protein S18 [Bacillus cereus MM3]
gi|228607307|gb|EEK64637.1| 30S ribosomal protein S18 [Bacillus cereus MM3]
gi|228647169|gb|EEL03257.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST196]
gi|228677350|gb|EEL31612.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-28]
gi|228716160|gb|EEL67879.1| 30S ribosomal protein S18 [Bacillus cereus AH603]
gi|228734371|gb|EEL85042.1| 30S ribosomal protein S18 [Bacillus cereus AH1272]
gi|228740592|gb|EEL90863.1| 30S ribosomal protein S18 [Bacillus cereus AH1273]
gi|228746649|gb|EEL96538.1| 30S ribosomal protein S18 [Bacillus mycoides DSM 2048]
Length = 82
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 13 RAKRRKVCFFTSNGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRAR 72
Query: 74 YLGLIAYVN 82
+ L+ YV
Sbjct: 73 QMALLPYVG 81
>gi|239637255|ref|ZP_04678243.1| ribosomal protein S18 [Staphylococcus warneri L37603]
gi|239597211|gb|EEQ79720.1| ribosomal protein S18 [Staphylococcus warneri L37603]
gi|330685075|gb|EGG96742.1| ribosomal protein S18 [Staphylococcus epidermidis VCU121]
Length = 80
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTAAIKRARHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|256821795|ref|YP_003145758.1| 30S ribosomal protein S18 [Kangiella koreensis DSM 16069]
gi|256795334|gb|ACV25990.1| ribosomal protein S18 [Kangiella koreensis DSM 16069]
Length = 75
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ RRK C S +G IDYKD L ++++ GKIVPSRI+ S K QR+LA A+KRA
Sbjct: 3 RFNRRRKFCRFSAEGVVEIDYKDTATLKNYITETGKIVPSRITGTSAKYQRQLASAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYTD 72
>gi|326568102|gb|EGE18186.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC7]
Length = 75
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL +++S+ GKI PSRI+ S K QR+L AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGITHIDYKDVELLKQYISENGKITPSRITGTSTKYQRQLTVAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|89100929|ref|ZP_01173776.1| ribosomal protein S18 [Bacillus sp. NRRL B-14911]
gi|89084338|gb|EAR63492.1| ribosomal protein S18 [Bacillus sp. NRRL B-14911]
Length = 81
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 17 VCYFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTNAKYQRKLTVAIKRARIMALLP 76
Query: 80 YVN 82
YV+
Sbjct: 77 YVS 79
>gi|296113491|ref|YP_003627429.1| 30S ribosomal protein S18 [Moraxella catarrhalis RH4]
gi|295921185|gb|ADG61536.1| 30S ribosomal protein S18 [Moraxella catarrhalis RH4]
gi|326559388|gb|EGE09813.1| 30S ribosomal protein S18 [Moraxella catarrhalis 46P47B1]
gi|326559759|gb|EGE10169.1| 30S ribosomal protein S18 [Moraxella catarrhalis 7169]
gi|326565023|gb|EGE15223.1| 30S ribosomal protein S18 [Moraxella catarrhalis 103P14B1]
gi|326566025|gb|EGE16185.1| 30S ribosomal protein S18 [Moraxella catarrhalis 12P80B1]
gi|326568519|gb|EGE18591.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC1]
gi|326572422|gb|EGE22414.1| 30S ribosomal protein S18 [Moraxella catarrhalis BC8]
gi|326572532|gb|EGE22521.1| 30S ribosomal protein S18 [Moraxella catarrhalis CO72]
gi|326574129|gb|EGE24077.1| 30S ribosomal protein S18 [Moraxella catarrhalis 101P30B1]
gi|326575565|gb|EGE25489.1| 30S ribosomal protein S18 [Moraxella catarrhalis O35E]
Length = 75
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL +++S+ GKI PSRI+ S K QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGITHIDYKDVELLKQYISENGKITPSRITGTSTKYQRQLAVAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|119947024|ref|YP_944704.1| ribosomal protein S18 [Psychromonas ingrahamii 37]
gi|166220979|sp|A1T040|RS18_PSYIN RecName: Full=30S ribosomal protein S18
gi|119865628|gb|ABM05105.1| SSU ribosomal protein S18P [Psychromonas ingrahamii 37]
Length = 75
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVSEIDYKDVVTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|289209095|ref|YP_003461161.1| ribosomal protein S18 [Thioalkalivibrio sp. K90mix]
gi|288944726|gb|ADC72425.1| ribosomal protein S18 [Thioalkalivibrio sp. K90mix]
Length = 74
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ LL F+++ GKIVPSR++ S K QR+LA A+KRA
Sbjct: 3 RFPRRRKYCKFTAEGIDYIDYKDLNLLKGFVTETGKIVPSRVTGTSAKYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYSD 72
>gi|288941715|ref|YP_003443955.1| 30S ribosomal protein S18 [Allochromatium vinosum DSM 180]
gi|288897087|gb|ADC62923.1| ribosomal protein S18 [Allochromatium vinosum DSM 180]
Length = 74
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R++ C + +G IDYKD+ LL ++S+ GKIVPSRI+ S K QR+LA+AIKRA
Sbjct: 3 RFFRRKRYCRFTAEGITEIDYKDLNLLKAYISESGKIVPSRITGTSAKYQRQLAQAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|242243301|ref|ZP_04797746.1| 30S ribosomal protein S18 [Staphylococcus epidermidis W23144]
gi|251811311|ref|ZP_04825784.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
BCM-HMP0060]
gi|293367634|ref|ZP_06614286.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|242233250|gb|EES35562.1| 30S ribosomal protein S18 [Staphylococcus epidermidis W23144]
gi|251805178|gb|EES57835.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
BCM-HMP0060]
gi|291318204|gb|EFE58598.1| 30S ribosomal protein S18 [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 88
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR++ L
Sbjct: 21 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMAL 80
Query: 78 IAYV 81
+ YV
Sbjct: 81 LPYV 84
>gi|288554587|ref|YP_003426522.1| 30S ribosomal protein S18 [Bacillus pseudofirmus OF4]
gi|288545747|gb|ADC49630.1| 30S ribosomal protein S18 [Bacillus pseudofirmus OF4]
Length = 77
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD LL RF+S+RGKI+P R++ S K QR+L A
Sbjct: 1 MARRGRPKRRKVCFFTVNKITKIDYKDTDLLKRFISERGKILPRRVTGTSAKYQRQLTTA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ YVN
Sbjct: 61 IKRARQIALLPYVN 74
>gi|332971411|gb|EGK10369.1| 30S ribosomal protein S18 [Desmospora sp. 8437]
Length = 75
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR + RRK C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRRGNKRRKVCFFTVNKIEYIDYKDVDLLRKFISERGKILPRRVTGTSSKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ Y
Sbjct: 61 IKRARQMALLPYTT 74
>gi|220934100|ref|YP_002512999.1| ribosomal protein S18 [Thioalkalivibrio sp. HL-EbGR7]
gi|254812963|sp|B8GNS3|RS18_THISH RecName: Full=30S ribosomal protein S18
gi|219995410|gb|ACL72012.1| ribosomal protein S18 [Thioalkalivibrio sp. HL-EbGR7]
Length = 74
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ S + QR+LA A+KRA
Sbjct: 3 RFFRRRKYCRFTAEGVEFIDYKDLNTLKNYITETGKIVPSRITGTSARYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYCD 72
>gi|304413760|ref|ZP_07395204.1| 30S ribosomal subunit protein S18 [Candidatus Regiella
insecticola LSR1]
gi|304283851|gb|EFL92245.1| 30S ribosomal subunit protein S18 [Candidatus Regiella
insecticola LSR1]
Length = 75
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 PYFRRRKFCRFTAEGTLEIDYKDIVTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|15923357|ref|NP_370891.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926068|ref|NP_373601.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
N315]
gi|21282072|ref|NP_645160.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482597|ref|YP_039821.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485247|ref|YP_042468.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57652627|ref|YP_185330.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
COL]
gi|82750079|ref|YP_415820.1| 30S ribosomal protein S18 [Staphylococcus aureus RF122]
gi|87160951|ref|YP_493082.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194149|ref|YP_498939.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266854|ref|YP_001245797.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JH9]
gi|150392900|ref|YP_001315575.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JH1]
gi|151220571|ref|YP_001331393.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978695|ref|YP_001440954.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508639|ref|YP_001574298.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142675|ref|ZP_03567168.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316532|ref|ZP_04839745.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253730731|ref|ZP_04864896.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735110|ref|ZP_04869275.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005162|ref|ZP_05143763.2| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424511|ref|ZP_05600940.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427180|ref|ZP_05603582.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429816|ref|ZP_05606203.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
68-397]
gi|257432520|ref|ZP_05608883.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus E1410]
gi|257435422|ref|ZP_05611473.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M876]
gi|257794202|ref|ZP_05643181.1| 30S ribosomal protein S18 [Staphylococcus aureus A9781]
gi|258413513|ref|ZP_05681788.1| 30S ribosomal protein S18 [Staphylococcus aureus A9763]
gi|258421363|ref|ZP_05684290.1| SSU ribosomal protein S18 [Staphylococcus aureus A9719]
gi|258424580|ref|ZP_05687457.1| SSU ribosomal protein S18 [Staphylococcus aureus A9635]
gi|258436936|ref|ZP_05689276.1| ribosomal protein S18 [Staphylococcus aureus A9299]
gi|258444347|ref|ZP_05692681.1| ribosomal protein S18 [Staphylococcus aureus A8115]
gi|258444884|ref|ZP_05693205.1| ribosomal protein S18 [Staphylococcus aureus A6300]
gi|258448089|ref|ZP_05696218.1| ribosomal protein S18 [Staphylococcus aureus A6224]
gi|258453040|ref|ZP_05701033.1| ribosomal protein S18 [Staphylococcus aureus A5948]
gi|258455922|ref|ZP_05703877.1| ribosomal protein S18 [Staphylococcus aureus A5937]
gi|262048929|ref|ZP_06021809.1| 30S ribosomal protein S18 [Staphylococcus aureus D30]
gi|262052853|ref|ZP_06025038.1| 30S ribosomal protein S18 [Staphylococcus aureus 930918-3]
gi|269202015|ref|YP_003281284.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ED98]
gi|282893528|ref|ZP_06301761.1| 30S ribosomal protein S18 [Staphylococcus aureus A8117]
gi|282902953|ref|ZP_06310846.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus C160]
gi|282907350|ref|ZP_06315198.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907693|ref|ZP_06315535.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912600|ref|ZP_06320396.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913226|ref|ZP_06321018.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M899]
gi|282915690|ref|ZP_06323461.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
D139]
gi|282921665|ref|ZP_06329383.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C427]
gi|282922341|ref|ZP_06330032.1| 30S ribosomal protein S18 [Staphylococcus aureus A9765]
gi|282922853|ref|ZP_06330543.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C101]
gi|282927422|ref|ZP_06335040.1| 30S ribosomal protein S18 [Staphylococcus aureus A10102]
gi|283768095|ref|ZP_06341010.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
H19]
gi|283959806|ref|ZP_06377247.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023376|ref|ZP_06377774.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
132]
gi|293498275|ref|ZP_06666129.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509216|ref|ZP_06667934.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M809]
gi|293550480|ref|ZP_06673152.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M1015]
gi|294850016|ref|ZP_06790754.1| 30S ribosomal protein S18 [Staphylococcus aureus A9754]
gi|295405640|ref|ZP_06815450.1| 30S ribosomal protein S18 [Staphylococcus aureus A8819]
gi|295426902|ref|ZP_06819541.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275194|ref|ZP_06857701.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MR1]
gi|297209119|ref|ZP_06925518.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245547|ref|ZP_06929415.1| 30S ribosomal protein S18 [Staphylococcus aureus A8796]
gi|297588886|ref|ZP_06947527.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MN8]
gi|300911120|ref|ZP_07128569.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380333|ref|ZP_07363053.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54039414|sp|P66468|RS18_STAAN RecName: Full=30S ribosomal protein S18
gi|54039415|sp|P66469|RS18_STAAW RecName: Full=30S ribosomal protein S18
gi|54042149|sp|P66467|RS18_STAAM RecName: Full=30S ribosomal protein S18
gi|56749541|sp|Q6GCA5|RS18_STAAS RecName: Full=30S ribosomal protein S18
gi|56749588|sp|Q6GJV1|RS18_STAAR RecName: Full=30S ribosomal protein S18
gi|71153727|sp|Q5HIS7|RS18_STAAC RecName: Full=30S ribosomal protein S18
gi|123098065|sp|Q2G111|RS18_STAA8 RecName: Full=30S ribosomal protein S18
gi|123736012|sp|Q2FJP6|RS18_STAA3 RecName: Full=30S ribosomal protein S18
gi|123741000|sp|Q2YVJ0|RS18_STAAB RecName: Full=30S ribosomal protein S18
gi|166222245|sp|A7WY61|RS18_STAA1 RecName: Full=30S ribosomal protein S18
gi|172048763|sp|A6QE49|RS18_STAAE RecName: Full=30S ribosomal protein S18
gi|189029691|sp|A6TYM0|RS18_STAA2 RecName: Full=30S ribosomal protein S18
gi|189029692|sp|A5IPU8|RS18_STAA9 RecName: Full=30S ribosomal protein S18
gi|189029693|sp|A8YZJ3|RS18_STAAT RecName: Full=30S ribosomal protein S18
gi|13700281|dbj|BAB41579.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
N315]
gi|14246135|dbj|BAB56529.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203508|dbj|BAB94208.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MW2]
gi|49240726|emb|CAG39387.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49243690|emb|CAG42114.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286813|gb|AAW38907.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus COL]
gi|82655610|emb|CAI80006.1| 30S ribosomal protein S18 [Staphylococcus aureus RF122]
gi|87126925|gb|ABD21439.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201707|gb|ABD29517.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147739923|gb|ABQ48221.1| SSU ribosomal protein S18P [Staphylococcus aureus subsp. aureus
JH9]
gi|149945352|gb|ABR51288.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus JH1]
gi|150373371|dbj|BAF66631.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156720830|dbj|BAF77247.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367448|gb|ABX28419.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725575|gb|EES94304.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726910|gb|EES95639.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257273529|gb|EEV05631.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276811|gb|EEV08262.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257280297|gb|EEV10884.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
68-397]
gi|257283399|gb|EEV13531.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus E1410]
gi|257286018|gb|EEV16134.1| SSU ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M876]
gi|257788174|gb|EEV26514.1| 30S ribosomal protein S18 [Staphylococcus aureus A9781]
gi|257839760|gb|EEV64229.1| 30S ribosomal protein S18 [Staphylococcus aureus A9763]
gi|257842787|gb|EEV67209.1| SSU ribosomal protein S18 [Staphylococcus aureus A9719]
gi|257845175|gb|EEV69212.1| SSU ribosomal protein S18 [Staphylococcus aureus A9635]
gi|257848727|gb|EEV72714.1| ribosomal protein S18 [Staphylococcus aureus A9299]
gi|257850606|gb|EEV74554.1| ribosomal protein S18 [Staphylococcus aureus A8115]
gi|257856202|gb|EEV79116.1| ribosomal protein S18 [Staphylococcus aureus A6300]
gi|257858604|gb|EEV81478.1| ribosomal protein S18 [Staphylococcus aureus A6224]
gi|257859250|gb|EEV82105.1| ribosomal protein S18 [Staphylococcus aureus A5948]
gi|257862134|gb|EEV84907.1| ribosomal protein S18 [Staphylococcus aureus A5937]
gi|259159254|gb|EEW44313.1| 30S ribosomal protein S18 [Staphylococcus aureus 930918-3]
gi|259163001|gb|EEW47563.1| 30S ribosomal protein S18 [Staphylococcus aureus D30]
gi|262074305|gb|ACY10278.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ED98]
gi|269939947|emb|CBI48319.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TW20]
gi|282315074|gb|EFB45460.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C101]
gi|282316080|gb|EFB46464.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
C427]
gi|282320506|gb|EFB50845.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
D139]
gi|282323326|gb|EFB53645.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M899]
gi|282324296|gb|EFB54612.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328598|gb|EFB58869.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330249|gb|EFB59770.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590746|gb|EFB95822.1| 30S ribosomal protein S18 [Staphylococcus aureus A10102]
gi|282593467|gb|EFB98462.1| 30S ribosomal protein S18 [Staphylococcus aureus A9765]
gi|282597412|gb|EFC02371.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus C160]
gi|282764214|gb|EFC04341.1| 30S ribosomal protein S18 [Staphylococcus aureus A8117]
gi|283461974|gb|EFC09058.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
H19]
gi|283469674|emb|CAQ48885.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ST398]
gi|283789398|gb|EFC28225.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816089|gb|ADC36576.1| SSU ribosomal protein S18p [Staphylococcus aureus 04-02981]
gi|290919527|gb|EFD96603.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus M1015]
gi|291097206|gb|EFE27464.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467968|gb|EFF10476.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
M809]
gi|294823150|gb|EFG39581.1| 30S ribosomal protein S18 [Staphylococcus aureus A9754]
gi|294969715|gb|EFG45734.1| 30S ribosomal protein S18 [Staphylococcus aureus A8819]
gi|295129354|gb|EFG58981.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296886052|gb|EFH24986.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177533|gb|EFH36784.1| 30S ribosomal protein S18 [Staphylococcus aureus A8796]
gi|297577397|gb|EFH96110.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MN8]
gi|298693705|gb|ADI96927.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ED133]
gi|300887299|gb|EFK82495.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332104|gb|ADL22297.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750239|gb|ADL64416.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304341314|gb|EFM07233.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312436518|gb|ADQ75589.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828889|emb|CBX33731.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130015|gb|EFT86004.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194827|gb|EFU25216.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198049|gb|EFU28381.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139324|gb|EFW31203.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142874|gb|EFW34670.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438827|gb|EGA96565.1| 30S ribosomal protein S18 [Staphylococcus aureus O11]
gi|323442576|gb|EGB00204.1| 30S ribosomal protein S18 [Staphylococcus aureus O46]
gi|329313060|gb|AEB87473.1| 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus
T0131]
gi|329724234|gb|EGG60747.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21189]
gi|329725657|gb|EGG62136.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21172]
gi|329732622|gb|EGG68972.1| ribosomal protein S18 [Staphylococcus aureus subsp. aureus 21193]
Length = 80
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKR+R++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRSRHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|330720458|gb|EGG98765.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC2047]
Length = 75
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G +IDYKD+ L F+++ GKIVPSRI+ + QR+LA AIKRA
Sbjct: 3 RFFRRRKYCRFTAEGVDQIDYKDLDTLKGFVTETGKIVPSRITGTKARYQRQLATAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|260584271|ref|ZP_05852018.1| 30S ribosomal protein S18 [Granulicatella elegans ATCC 700633]
gi|260157789|gb|EEW92858.1| 30S ribosomal protein S18 [Granulicatella elegans ATCC 700633]
Length = 80
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + IDYKD+ LL R++S++GKI+P R++ K QR L AIKRAR +GL
Sbjct: 14 KKVCYFTANHITYIDYKDVELLKRYISEKGKILPRRVTGTCAKYQRLLTVAIKRARIMGL 73
Query: 78 IAYVNL 83
+ + +
Sbjct: 74 LPFTTV 79
>gi|319789282|ref|YP_004150915.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
gi|317113784|gb|ADU96274.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
Length = 80
Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R RRK C + RIDYK++ LL F+S+RG+I+P RIS V K QR+LA+A
Sbjct: 5 LPQRRFVRRRKYCKFCAEKIERIDYKNVELLKSFISERGRIIPRRISGVCSKHQRQLARA 64
Query: 69 IKRARYLGLIAYVNL 83
+KRAR+L L+ +V +
Sbjct: 65 VKRARHLALLPFVKM 79
>gi|254780330|ref|YP_003064743.1| 30S ribosomal protein S18 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040007|gb|ACT56803.1| 30S ribosomal protein S18 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 83
Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK
Sbjct: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
Query: 61 KQRELAKAIKRARYLGLIAYVNL 83
KQRELAKAIKRARYLGLIAYVNL
Sbjct: 61 KQRELAKAIKRARYLGLIAYVNL 83
>gi|294501974|ref|YP_003565674.1| 30S ribosomal protein S18 [Bacillus megaterium QM B1551]
gi|295707325|ref|YP_003600400.1| 30S ribosomal protein S18 [Bacillus megaterium DSM 319]
gi|294351911|gb|ADE72240.1| 30S ribosomal protein S18 [Bacillus megaterium QM B1551]
gi|294804984|gb|ADF42050.1| 30S ribosomal protein S18 [Bacillus megaterium DSM 319]
Length = 79
Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ +L +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 15 VCFFTANGITHIDYKDVDMLKKFVSERGKILPRRVTGTSAKYQRKLTIAIKRARQMALLP 74
Query: 80 YVN 82
YV+
Sbjct: 75 YVS 77
>gi|331091911|ref|ZP_08340743.1| hypothetical protein HMPREF9477_01386 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402810|gb|EGG82377.1| hypothetical protein HMPREF9477_01386 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 87
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GNKADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR+L L+ YV
Sbjct: 66 QRALTVAIKRARHLALMPYV 85
>gi|78485707|ref|YP_391632.1| ribosomal protein S18 [Thiomicrospira crunogena XCL-2]
gi|123741575|sp|Q31FW5|RS18_THICR RecName: Full=30S ribosomal protein S18
gi|78363993|gb|ABB41958.1| SSU ribosomal protein S18P [Thiomicrospira crunogena XCL-2]
Length = 75
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K C + +G IDYKD+ L ++++ GKIVPSRI+ S K QR+L+ AIKRARY
Sbjct: 5 FGRKKFCRFTVEGVKEIDYKDLDTLKSYITETGKIVPSRITGTSAKYQRQLSTAIKRARY 64
Query: 75 LGLIAYVN 82
L L+ Y +
Sbjct: 65 LALLPYTD 72
>gi|167766039|ref|ZP_02438092.1| hypothetical protein CLOSS21_00532 [Clostridium sp. SS2/1]
gi|317499404|ref|ZP_07957671.1| ribosomal protein S18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712119|gb|EDS22698.1| hypothetical protein CLOSS21_00532 [Clostridium sp. SS2/1]
gi|291559997|emb|CBL38797.1| SSU ribosomal protein S18P [butyrate-producing bacterium SSC/2]
gi|316893276|gb|EFV15491.1| ribosomal protein S18 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 84
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+P+ RR RRK C + IDYKD+ L +++S+RGKI+P RI+ K QR
Sbjct: 5 KGDSPMRRRGGRRRRKVCAFCTEADAVIDYKDVATLKKYVSERGKILPRRITGTCAKHQR 64
Query: 64 ELAKAIKRARYLGLIAYV 81
+ AIKRAR+L L+ Y
Sbjct: 65 AVTGAIKRARHLALMPYT 82
>gi|56422015|ref|YP_149333.1| 30S ribosomal protein S18 [Geobacillus kaustophilus HTA426]
gi|196249872|ref|ZP_03148568.1| ribosomal protein S18 [Geobacillus sp. G11MC16]
gi|261420889|ref|YP_003254571.1| 30S ribosomal protein S18 [Geobacillus sp. Y412MC61]
gi|297531674|ref|YP_003672949.1| ribosomal protein S18 [Geobacillus sp. C56-T3]
gi|319768560|ref|YP_004134061.1| ribosomal protein S18 [Geobacillus sp. Y412MC52]
gi|585939|sp|P10806|RS18_BACST RecName: Full=30S ribosomal protein S18; AltName: Full=BS19;
AltName: Full=BS21
gi|81675665|sp|Q5KU71|RS18_GEOKA RecName: Full=30S ribosomal protein S18
gi|205562283|sp|A4ITV8|RS18_GEOTN RecName: Full=30S ribosomal protein S18
gi|56381857|dbj|BAD77765.1| 30S ribosomal protein S18 (BS21) [Geobacillus kaustophilus
HTA426]
gi|196210748|gb|EDY05511.1| ribosomal protein S18 [Geobacillus sp. G11MC16]
gi|261377346|gb|ACX80089.1| ribosomal protein S18 [Geobacillus sp. Y412MC61]
gi|297254926|gb|ADI28372.1| ribosomal protein S18 [Geobacillus sp. C56-T3]
gi|317113426|gb|ADU95918.1| ribosomal protein S18 [Geobacillus sp. Y412MC52]
Length = 78
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 14 VCYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLP 73
Query: 80 YV 81
YV
Sbjct: 74 YV 75
>gi|91775681|ref|YP_545437.1| 30S ribosomal protein S18 [Methylobacillus flagellatus KT]
gi|123078871|sp|Q1H1P1|RS18_METFK RecName: Full=30S ribosomal protein S18
gi|91709668|gb|ABE49596.1| SSU ribosomal protein S18P [Methylobacillus flagellatus KT]
Length = 75
Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G ++DYKD+ LL F+++ GKI+P+RI+ K QR+L A+
Sbjct: 1 MARDMFKRRRYCRFSAEGIKQVDYKDVDLLKDFINENGKIIPARITGTKAKYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|30023496|ref|NP_835127.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 14579]
gi|42784668|ref|NP_981915.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10987]
gi|47568671|ref|ZP_00239368.1| ribosomal protein S18 [Bacillus cereus G9241]
gi|206970197|ref|ZP_03231150.1| 30S ribosomal protein S18 [Bacillus cereus AH1134]
gi|206975889|ref|ZP_03236800.1| 30S ribosomal protein S18 [Bacillus cereus H3081.97]
gi|217962965|ref|YP_002341543.1| 30S ribosomal protein S18 [Bacillus cereus AH187]
gi|218232550|ref|YP_002370247.1| 30S ribosomal protein S18 [Bacillus cereus B4264]
gi|218900613|ref|YP_002449024.1| ribosomal protein S18 [Bacillus cereus G9842]
gi|222098949|ref|YP_002533007.1| 30S ribosomal protein s18 [Bacillus cereus Q1]
gi|228905416|ref|ZP_04069371.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 4222]
gi|228911311|ref|ZP_04075115.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 200]
gi|228924217|ref|ZP_04087488.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228942621|ref|ZP_04105153.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955723|ref|ZP_04117718.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961736|ref|ZP_04123339.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228968624|ref|ZP_04129607.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228975551|ref|ZP_04136103.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982187|ref|ZP_04142476.1| 30S ribosomal protein S18 [Bacillus thuringiensis Bt407]
gi|228988700|ref|ZP_04148785.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229051141|ref|ZP_04194685.1| 30S ribosomal protein S18 [Bacillus cereus AH676]
gi|229072937|ref|ZP_04206133.1| 30S ribosomal protein S18 [Bacillus cereus F65185]
gi|229082681|ref|ZP_04215135.1| 30S ribosomal protein S18 [Bacillus cereus Rock4-2]
gi|229112885|ref|ZP_04242416.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-15]
gi|229130718|ref|ZP_04259671.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-Cer4]
gi|229142221|ref|ZP_04270745.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST26]
gi|229148022|ref|ZP_04276361.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST24]
gi|229153631|ref|ZP_04281807.1| 30S ribosomal protein S18 [Bacillus cereus m1550]
gi|229159032|ref|ZP_04287088.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 4342]
gi|229164423|ref|ZP_04292351.1| 30S ribosomal protein S18 [Bacillus cereus R309803]
gi|229181718|ref|ZP_04309041.1| 30S ribosomal protein S18 [Bacillus cereus 172560W]
gi|229193723|ref|ZP_04320664.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10876]
gi|229199602|ref|ZP_04326262.1| 30S ribosomal protein S18 [Bacillus cereus m1293]
gi|296505900|ref|YP_003667600.1| 30S ribosomal protein S18 [Bacillus thuringiensis BMB171]
gi|59798780|sp|Q72WV5|RS18_BACC1 RecName: Full=30S ribosomal protein S18
gi|59798875|sp|Q814G7|RS18_BACCR RecName: Full=30S ribosomal protein S18
gi|226735108|sp|B7IS16|RS18_BACC2 RecName: Full=30S ribosomal protein S18
gi|226735109|sp|B7HGD2|RS18_BACC4 RecName: Full=30S ribosomal protein S18
gi|226735110|sp|B7HZF9|RS18_BACC7 RecName: Full=30S ribosomal protein S18
gi|254765410|sp|B9IT30|RS18_BACCQ RecName: Full=30S ribosomal protein S18
gi|29899057|gb|AAP12328.1| SSU ribosomal protein S18P [Bacillus cereus ATCC 14579]
gi|42740600|gb|AAS44523.1| ribosomal protein S18 [Bacillus cereus ATCC 10987]
gi|47554659|gb|EAL13013.1| ribosomal protein S18 [Bacillus cereus G9241]
gi|206734774|gb|EDZ51943.1| 30S ribosomal protein S18 [Bacillus cereus AH1134]
gi|206745983|gb|EDZ57379.1| 30S ribosomal protein S18 [Bacillus cereus H3081.97]
gi|217064909|gb|ACJ79159.1| ribosomal protein S18 [Bacillus cereus AH187]
gi|218160507|gb|ACK60499.1| ribosomal protein S18 [Bacillus cereus B4264]
gi|218540805|gb|ACK93199.1| ribosomal protein S18 [Bacillus cereus G9842]
gi|221243008|gb|ACM15718.1| ribosomal protein S18 [Bacillus cereus Q1]
gi|228583876|gb|EEK42034.1| 30S ribosomal protein S18 [Bacillus cereus m1293]
gi|228589748|gb|EEK47626.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 10876]
gi|228601751|gb|EEK59249.1| 30S ribosomal protein S18 [Bacillus cereus 172560W]
gi|228619028|gb|EEK75926.1| 30S ribosomal protein S18 [Bacillus cereus R309803]
gi|228624451|gb|EEK81222.1| 30S ribosomal protein S18 [Bacillus cereus ATCC 4342]
gi|228629817|gb|EEK86470.1| 30S ribosomal protein S18 [Bacillus cereus m1550]
gi|228635447|gb|EEK91938.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST24]
gi|228641239|gb|EEK97546.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-ST26]
gi|228652735|gb|EEL08620.1| 30S ribosomal protein S18 [Bacillus cereus BDRD-Cer4]
gi|228670564|gb|EEL25877.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-15]
gi|228700626|gb|EEL53158.1| 30S ribosomal protein S18 [Bacillus cereus Rock4-2]
gi|228710183|gb|EEL62161.1| 30S ribosomal protein S18 [Bacillus cereus F65185]
gi|228722204|gb|EEL73605.1| 30S ribosomal protein S18 [Bacillus cereus AH676]
gi|228771012|gb|EEM19493.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228777539|gb|EEM25817.1| 30S ribosomal protein S18 [Bacillus thuringiensis Bt407]
gi|228784161|gb|EEM32188.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791053|gb|EEM38671.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228797930|gb|EEM44940.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228803951|gb|EEM50575.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817047|gb|EEM63140.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228835435|gb|EEM80805.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848329|gb|EEM93179.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 200]
gi|228854236|gb|EEM98939.1| 30S ribosomal protein S18 [Bacillus thuringiensis IBL 4222]
gi|296326952|gb|ADH09880.1| 30S ribosomal protein S18 [Bacillus thuringiensis BMB171]
gi|324329423|gb|ADY24683.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|326943270|gb|AEA19166.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 77
Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 8 RAKRRKVCFFTANGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRAR 67
Query: 74 YLGLIAYVN 82
+ L+ YV
Sbjct: 68 QMALLPYVG 76
>gi|326802630|ref|YP_004320448.1| ribosomal protein S18 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651036|gb|AEA01219.1| ribosomal protein S18 [Aerococcus urinae ACS-120-V-Col10a]
Length = 79
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD LL+R++S +GKI+P R++ K QR L AIKRAR + L+
Sbjct: 14 KVCFFCANHMDFIDYKDTDLLSRYVSDKGKILPRRVTGTCAKHQRTLTSAIKRARIMALL 73
Query: 79 AYV 81
+
Sbjct: 74 PFT 76
>gi|257458034|ref|ZP_05623193.1| 30S ribosomal protein S18 [Treponema vincentii ATCC 35580]
gi|257444747|gb|EEV19831.1| 30S ribosomal protein S18 [Treponema vincentii ATCC 35580]
Length = 103
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ R+K C + A IDYKD L RF+++RGKI+P RI+ K QR+LA IKRA
Sbjct: 34 KMFFRKKVCRFCSQKAK-IDYKDPDSLRRFITERGKILPRRITGTCAKHQRKLALEIKRA 92
Query: 73 RYLGLIAYV 81
R L L+ YV
Sbjct: 93 RALALLPYV 101
>gi|119776194|ref|YP_928934.1| 30S ribosomal protein S18 [Shewanella amazonensis SB2B]
gi|166222237|sp|A1SA58|RS18_SHEAM RecName: Full=30S ribosomal protein S18
gi|119768694|gb|ABM01265.1| SSU ribosomal protein S18P [Shewanella amazonensis SB2B]
Length = 75
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVAEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|319651070|ref|ZP_08005204.1| ribosomal protein S18 [Bacillus sp. 2_A_57_CT2]
gi|317397240|gb|EFV77944.1| ribosomal protein S18 [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 15 VCFFTANGITHIDYKDVDLLKKFISERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLP 74
Query: 80 YVN 82
YV+
Sbjct: 75 YVS 77
>gi|226308|prf||1506337A ribosomal protein S18
Length = 77
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 13 VCYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLP 72
Query: 80 YV 81
YV
Sbjct: 73 YV 74
>gi|169351670|ref|ZP_02868608.1| hypothetical protein CLOSPI_02451 [Clostridium spiroforme DSM
1552]
gi|169291892|gb|EDS74025.1| hypothetical protein CLOSPI_02451 [Clostridium spiroforme DSM
1552]
Length = 76
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR LA AI
Sbjct: 3 FRKQRMGRKKVCYFTKNNITYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|52082634|ref|YP_081425.1| 30S ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|52788033|ref|YP_093862.1| 30S ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|319648500|ref|ZP_08002716.1| 30S ribosomal protein S18 [Bacillus sp. BT1B_CT2]
gi|81690794|sp|Q65CP5|RS18_BACLD RecName: Full=30S ribosomal protein S18
gi|52005845|gb|AAU25787.1| ribosomal protein S18 [Bacillus licheniformis ATCC 14580]
gi|52350535|gb|AAU43169.1| RpsR [Bacillus licheniformis ATCC 14580]
gi|317389579|gb|EFV70390.1| 30S ribosomal protein S18 [Bacillus sp. BT1B_CT2]
Length = 79
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 15 VCYFTSNGITHIDYKDVDLLRKFISERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLP 74
Query: 80 YV 81
YV
Sbjct: 75 YV 76
>gi|73663680|ref|YP_302461.1| 30S ribosomal protein S18 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123747836|sp|Q49UQ2|RS18_STAS1 RecName: Full=30S ribosomal protein S18
gi|72496195|dbj|BAE19516.1| 30S ribosomal protein S18 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 80
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD LL RF+S+RGKI+P R++ S K QR L AIKR+R++ L
Sbjct: 13 KKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTLAIKRSRHMAL 72
Query: 78 IAYV 81
+ YV
Sbjct: 73 LPYV 76
>gi|302383705|ref|YP_003819528.1| ribosomal protein S18 [Brevundimonas subvibrioides ATCC 15264]
gi|302194333|gb|ADL01905.1| ribosomal protein S18 [Brevundimonas subvibrioides ATCC 15264]
Length = 90
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 7/88 (7%)
Query: 1 MAEVAPTPLL-------RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSR 53
M + TP + RR + RRK CP +G+GAP+IDYKD++LL R++S+RGKIVPSR
Sbjct: 1 MTDTTSTPGMPVGSGSGRRPFNRRRKVCPFTGEGAPKIDYKDVKLLQRYISERGKIVPSR 60
Query: 54 ISSVSHKKQRELAKAIKRARYLGLIAYV 81
I++VS KQRELAKAIKRARYL L+ YV
Sbjct: 61 ITAVSQIKQRELAKAIKRARYLALLPYV 88
>gi|269837478|ref|YP_003319706.1| 30S ribosomal protein S18 [Sphaerobacter thermophilus DSM 20745]
gi|269786741|gb|ACZ38884.1| ribosomal protein S18 [Sphaerobacter thermophilus DSM 20745]
Length = 128
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 40/68 (58%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C G +DYKDI L R++S+RGKI P R + K QR LA AIKRAR
Sbjct: 60 YYPRRKVCGFCMDGIGEVDYKDIGRLRRYISERGKIEPRRQTGTCAKHQRSLAVAIKRAR 119
Query: 74 YLGLIAYV 81
++ L+ +
Sbjct: 120 HVALLPFT 127
>gi|298372706|ref|ZP_06982696.1| ribosomal protein S18 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275610|gb|EFI17161.1| ribosomal protein S18 [Bacteroidetes oral taxon 274 str. F0058]
Length = 93
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +FL+++GKI+P RI+ S K QR++A+A+KRAR+
Sbjct: 22 KNRKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRKVAQAVKRARH 81
Query: 75 LGLIAYVN 82
L L+ YV
Sbjct: 82 LALLPYVT 89
>gi|163784039|ref|ZP_02178996.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880696|gb|EDP74243.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
Length = 79
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P + R+K C +G DYK+I +L F+S+RGKIVPSRIS K QR
Sbjct: 1 MANNPAQKPFFQKRKKYCKFCAEGIEP-DYKNIDILKEFISERGKIVPSRISGTCGKHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
+LA AIKRAR L L+ YV
Sbjct: 60 KLAVAIKRARQLALLPYV 77
>gi|227821459|ref|YP_002825429.1| 30S ribosomal protein S18 [Sinorhizobium fredii NGR234]
gi|254812951|sp|C3M9B0|RS18_RHISN RecName: Full=30S ribosomal protein S18
gi|227340458|gb|ACP24676.1| 30S ribosomal protein S18 [Sinorhizobium fredii NGR234]
Length = 82
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|94971562|ref|YP_593610.1| 30S ribosomal protein S18 [Candidatus Koribacter versatilis
Ellin345]
gi|123079320|sp|Q1IHW4|RS18_ACIBL RecName: Full=30S ribosomal protein S18
gi|94553612|gb|ABF43536.1| SSU ribosomal protein S18P [Candidatus Koribacter versatilis
Ellin345]
Length = 123
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + IDYKD+RLL +F+++ GKIVP R++ V QR L+ AIK+
Sbjct: 51 RKFFRRKKVCKFCVEKIDAIDYKDVRLLGQFVAESGKIVPRRLTGVCTPHQRRLSDAIKQ 110
Query: 72 ARYLGLIAYVN 82
AR + L+ + +
Sbjct: 111 ARNIALLPFAS 121
>gi|319938326|ref|ZP_08012722.1| 30S ribosomal protein S18 [Coprobacillus sp. 29_1]
gi|319806509|gb|EFW03171.1| 30S ribosomal protein S18 [Coprobacillus sp. 29_1]
Length = 76
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR+LA AI
Sbjct: 3 FKRQRMGRKKVCFFTKNKIDYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRQLAAAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|210613749|ref|ZP_03289863.1| hypothetical protein CLONEX_02070 [Clostridium nexile DSM 1787]
gi|210150958|gb|EEA81966.1| hypothetical protein CLONEX_02070 [Clostridium nexile DSM 1787]
Length = 87
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GNKADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ YV
Sbjct: 66 QRALTVAIKRARHIALMPYV 85
>gi|119502819|ref|ZP_01624904.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2080]
gi|119461165|gb|EAW42255.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2080]
Length = 75
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L +++++ GKIVPSRI+ K QR+LA A+KRA
Sbjct: 3 RFFRRRKFCKFTAEGVKEIDYKDLETLKQYITETGKIVPSRITGTKAKYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYTD 72
>gi|225026122|ref|ZP_03715314.1| hypothetical protein EUBHAL_00363 [Eubacterium hallii DSM 3353]
gi|224956559|gb|EEG37768.1| hypothetical protein EUBHAL_00363 [Eubacterium hallii DSM 3353]
Length = 86
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P+ RR R+K C IDYKD+ L R++S+RGKI+P RI+ K Q
Sbjct: 6 DRGDAPMRRRGGRRRKKVCIFCADKNAVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQ 65
Query: 63 RELAKAIKRARYLGLIAYV 81
R L AIKRAR++ L+ Y
Sbjct: 66 RALTVAIKRARHVSLMPYT 84
>gi|90408976|ref|ZP_01217108.1| ribosomal protein S18 [Psychromonas sp. CNPT3]
gi|90309924|gb|EAS38077.1| ribosomal protein S18 [Psychromonas sp. CNPT3]
Length = 75
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVSEIDYKDVTTLKNYITESGKIVPSRITGTCAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL LI Y +L
Sbjct: 63 RYLSLIPYTDL 73
>gi|311032234|ref|ZP_07710324.1| 30S ribosomal protein S18 [Bacillus sp. m3-13]
Length = 79
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD +L +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 15 VCYFTANGITHIDYKDTDVLKKFVSERGKILPRRVTGTSAKYQRKLTIAIKRARQMALLP 74
Query: 80 YVN 82
YV+
Sbjct: 75 YVS 77
>gi|299820814|ref|ZP_07052703.1| 30S ribosomal protein S18 [Listeria grayi DSM 20601]
gi|299817835|gb|EFI85070.1| 30S ribosomal protein S18 [Listeria grayi DSM 20601]
Length = 79
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKR+R + L
Sbjct: 12 KKVCYFTANGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMAL 71
Query: 78 IAYV 81
+ +V
Sbjct: 72 LPFV 75
>gi|325662894|ref|ZP_08151463.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086618|ref|ZP_08335696.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470946|gb|EGC74175.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330410451|gb|EGG89883.1| 30S ribosomal protein S18 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 87
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GNKADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ L+ YV
Sbjct: 66 QRALTVAIKRARHIALMPYV 85
>gi|24375416|ref|NP_719459.1| 30S ribosomal protein S18 [Shewanella oneidensis MR-1]
gi|113971590|ref|YP_735383.1| 30S ribosomal protein S18 [Shewanella sp. MR-4]
gi|114046198|ref|YP_736748.1| 30S ribosomal protein S18 [Shewanella sp. MR-7]
gi|117919155|ref|YP_868347.1| 30S ribosomal protein S18 [Shewanella sp. ANA-3]
gi|120600212|ref|YP_964786.1| 30S ribosomal protein S18 [Shewanella sp. W3-18-1]
gi|126175836|ref|YP_001051985.1| 30S ribosomal protein S18 [Shewanella baltica OS155]
gi|146291860|ref|YP_001182284.1| 30S ribosomal protein S18 [Shewanella putrefaciens CN-32]
gi|152999252|ref|YP_001364933.1| 30S ribosomal protein S18 [Shewanella baltica OS185]
gi|160873865|ref|YP_001553181.1| 30S ribosomal protein S18 [Shewanella baltica OS195]
gi|217971925|ref|YP_002356676.1| 30S ribosomal protein S18 [Shewanella baltica OS223]
gi|304411184|ref|ZP_07392799.1| ribosomal protein S18 [Shewanella baltica OS183]
gi|307306479|ref|ZP_07586222.1| ribosomal protein S18 [Shewanella baltica BA175]
gi|59798905|sp|Q8EAH4|RS18_SHEON RecName: Full=30S ribosomal protein S18
gi|122943538|sp|Q0HF41|RS18_SHESM RecName: Full=30S ribosomal protein S18
gi|123030904|sp|Q0HYW4|RS18_SHESR RecName: Full=30S ribosomal protein S18
gi|166222238|sp|A3D8Q3|RS18_SHEB5 RecName: Full=30S ribosomal protein S18
gi|166222239|sp|A6WJ81|RS18_SHEB8 RecName: Full=30S ribosomal protein S18
gi|166222241|sp|A4Y3F2|RS18_SHEPC RecName: Full=30S ribosomal protein S18
gi|166222242|sp|A0KT22|RS18_SHESA RecName: Full=30S ribosomal protein S18
gi|166222243|sp|A1RNI7|RS18_SHESW RecName: Full=30S ribosomal protein S18
gi|189029687|sp|A9L122|RS18_SHEB9 RecName: Full=30S ribosomal protein S18
gi|254812954|sp|B8E9N8|RS18_SHEB2 RecName: Full=30S ribosomal protein S18
gi|24350257|gb|AAN56903.1|AE015825_2 ribosomal protein S18 [Shewanella oneidensis MR-1]
gi|113886274|gb|ABI40326.1| SSU ribosomal protein S18P [Shewanella sp. MR-4]
gi|113887640|gb|ABI41691.1| SSU ribosomal protein S18P [Shewanella sp. MR-7]
gi|117611487|gb|ABK46941.1| SSU ribosomal protein S18P [Shewanella sp. ANA-3]
gi|120560305|gb|ABM26232.1| SSU ribosomal protein S18P [Shewanella sp. W3-18-1]
gi|125999041|gb|ABN63116.1| SSU ribosomal protein S18P [Shewanella baltica OS155]
gi|145563550|gb|ABP74485.1| SSU ribosomal protein S18P [Shewanella putrefaciens CN-32]
gi|151363870|gb|ABS06870.1| ribosomal protein S18 [Shewanella baltica OS185]
gi|160859387|gb|ABX47921.1| ribosomal protein S18 [Shewanella baltica OS195]
gi|217497060|gb|ACK45253.1| ribosomal protein S18 [Shewanella baltica OS223]
gi|304350377|gb|EFM14780.1| ribosomal protein S18 [Shewanella baltica OS183]
gi|306910770|gb|EFN41198.1| ribosomal protein S18 [Shewanella baltica BA175]
gi|315266092|gb|ADT92945.1| ribosomal protein S18 [Shewanella baltica OS678]
gi|319425094|gb|ADV53168.1| ribosomal protein S18 [Shewanella putrefaciens 200]
Length = 75
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVAEIDYKDIVTLKNYITESGKIVPSRITGTSAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|291458693|ref|ZP_06598083.1| ribosomal protein S18 [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418610|gb|EFE92329.1| ribosomal protein S18 [Oribacterium sp. oral taxon 078 str. F0262]
Length = 118
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ P RRK C A +D+KDI L +++S+RGKI+P RI+ QR
Sbjct: 40 SARPRRAGGFRSRRKVCVFCSDKAKPVDFKDIATLRKYISERGKILPRRITGTCATHQRA 99
Query: 65 LAKAIKRARYLGLIAY 80
+ AIKRAR++ L+ Y
Sbjct: 100 ITTAIKRARHIALLPY 115
>gi|467373|dbj|BAA05219.1| ribosomal protein S18 [Bacillus subtilis]
Length = 81
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 17 VCYFTSNGITHIDYKDVDLLKKFVSERGKILPRRVTGTNAKYQRKLTAAIKRARQMALLP 76
Query: 80 YVN 82
YV+
Sbjct: 77 YVS 79
>gi|325295181|ref|YP_004281695.1| 30S ribosomal protein S18 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065629|gb|ADY73636.1| 30S ribosomal protein S18 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 80
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R RRK C + +IDYK++ LL F+S+RG+I+P RIS V K QR+LA+A
Sbjct: 5 LPQRRFVRRRKYCKFCAEKIEKIDYKNVELLKPFISERGRIIPRRISGVCSKHQRQLARA 64
Query: 69 IKRARYLGLIAYVNL 83
+KRAR+L L+ +V +
Sbjct: 65 VKRARHLALLPFVKI 79
>gi|127514210|ref|YP_001095407.1| ribosomal protein S18 [Shewanella loihica PV-4]
gi|166222240|sp|A3QI50|RS18_SHELP RecName: Full=30S ribosomal protein S18
gi|126639505|gb|ABO25148.1| SSU ribosomal protein S18P [Shewanella loihica PV-4]
Length = 75
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ + K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVTEIDYKDIATLKNYITESGKIVPSRITGTNAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|205371930|ref|ZP_03224750.1| 30S ribosomal protein S18 [Bacillus coahuilensis m4-4]
Length = 79
Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 15 VCYFTSNNITNIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTTAIKRARMMALLP 74
Query: 80 YVN 82
YV
Sbjct: 75 YVT 77
>gi|58038780|ref|YP_190744.1| 30S ribosomal protein S18 [Gluconobacter oxydans 621H]
gi|81672744|sp|Q5FU58|RS18_GLUOX RecName: Full=30S ribosomal protein S18
gi|58001194|gb|AAW60088.1| SSU ribosomal protein S18P [Gluconobacter oxydans 621H]
Length = 96
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 52/71 (73%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 24 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 83
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 84 RARFLALLPYV 94
>gi|77361356|ref|YP_340931.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas haloplanktis
TAC125]
gi|315125714|ref|YP_004067717.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas sp. SM9913]
gi|332535621|ref|ZP_08411387.1| 30S ribosomal protein S18 [Pseudoalteromonas haloplanktis
ANT/505]
gi|123588590|sp|Q3II81|RS18_PSEHT RecName: Full=30S ribosomal protein S18
gi|76876267|emb|CAI87489.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas haloplanktis
TAC125]
gi|315014228|gb|ADT67566.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas sp. SM9913]
gi|332034976|gb|EGI71498.1| 30S ribosomal protein S18 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 75
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRA
Sbjct: 3 RYFRRRKFCRFKAEGVQQIDYKDLATLRNYVTESGKIVPSRITGTSAKYQRQLATAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|30265490|ref|NP_847867.1| 30S ribosomal protein S18 [Bacillus anthracis str. Ames]
gi|47531058|ref|YP_022407.1| 30S ribosomal protein S18 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188309|ref|YP_031562.1| 30S ribosomal protein S18 [Bacillus anthracis str. Sterne]
gi|49481204|ref|YP_039462.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145280|ref|YP_086737.1| 30S ribosomal protein S18 [Bacillus cereus E33L]
gi|65317453|ref|ZP_00390412.1| COG0238: Ribosomal protein S18 [Bacillus anthracis str. A2012]
gi|118480500|ref|YP_897651.1| 30S ribosomal protein S18 [Bacillus thuringiensis str. Al Hakam]
gi|163943152|ref|YP_001648036.1| 30S ribosomal protein S18 [Bacillus weihenstephanensis KBAB4]
gi|165873035|ref|ZP_02217656.1| ribosomal protein S18 [Bacillus anthracis str. A0488]
gi|167635075|ref|ZP_02393392.1| ribosomal protein S18 [Bacillus anthracis str. A0442]
gi|167641758|ref|ZP_02400001.1| ribosomal protein S18 [Bacillus anthracis str. A0193]
gi|170689458|ref|ZP_02880648.1| ribosomal protein S18 [Bacillus anthracis str. A0465]
gi|170707550|ref|ZP_02898003.1| ribosomal protein S18 [Bacillus anthracis str. A0389]
gi|177655284|ref|ZP_02936838.1| ribosomal protein S18 [Bacillus anthracis str. A0174]
gi|190569300|ref|ZP_03022194.1| ribosomal protein S18 [Bacillus anthracis Tsiankovskii-I]
gi|196036074|ref|ZP_03103474.1| ribosomal protein S18 [Bacillus cereus W]
gi|196041980|ref|ZP_03109267.1| ribosomal protein S18 [Bacillus cereus NVH0597-99]
gi|196045471|ref|ZP_03112702.1| ribosomal protein S18 [Bacillus cereus 03BB108]
gi|218906664|ref|YP_002454498.1| ribosomal protein S18 [Bacillus cereus AH820]
gi|225867453|ref|YP_002752831.1| 30S ribosomal protein S18 [Bacillus cereus 03BB102]
gi|227818241|ref|YP_002818250.1| 30S ribosomal protein S18 [Bacillus anthracis str. CDC 684]
gi|228918084|ref|ZP_04081612.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930478|ref|ZP_04093478.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936752|ref|ZP_04099543.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949194|ref|ZP_04111462.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228994191|ref|ZP_04154091.1| 30S ribosomal protein S18 [Bacillus pseudomycoides DSM 12442]
gi|229000261|ref|ZP_04159830.1| 30S ribosomal protein S18 [Bacillus mycoides Rock3-17]
gi|229007785|ref|ZP_04165371.1| 30S ribosomal protein S18 [Bacillus mycoides Rock1-4]
gi|229035130|ref|ZP_04189076.1| 30S ribosomal protein S18 [Bacillus cereus AH1271]
gi|229087959|ref|ZP_04220067.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-44]
gi|229094583|ref|ZP_04225650.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-42]
gi|229099899|ref|ZP_04230822.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-29]
gi|229118962|ref|ZP_04248307.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-3]
gi|229124975|ref|ZP_04254149.1| 30S ribosomal protein S18 [Bacillus cereus 95/8201]
gi|229170175|ref|ZP_04297861.1| 30S ribosomal protein S18 [Bacillus cereus AH621]
gi|229187701|ref|ZP_04314837.1| 30S ribosomal protein S18 [Bacillus cereus BGSC 6E1]
gi|229604103|ref|YP_002869681.1| 30S ribosomal protein S18 [Bacillus anthracis str. A0248]
gi|254687087|ref|ZP_05150945.1| 30S ribosomal protein S18 [Bacillus anthracis str. CNEVA-9066]
gi|254724130|ref|ZP_05185915.1| 30S ribosomal protein S18 [Bacillus anthracis str. A1055]
gi|254735147|ref|ZP_05192857.1| 30S ribosomal protein S18 [Bacillus anthracis str. Western North
America USA6153]
gi|254742144|ref|ZP_05199831.1| 30S ribosomal protein S18 [Bacillus anthracis str. Kruger B]
gi|254755946|ref|ZP_05207978.1| 30S ribosomal protein S18 [Bacillus anthracis str. Vollum]
gi|254761374|ref|ZP_05213396.1| 30S ribosomal protein S18 [Bacillus anthracis str. Australia 94]
gi|300118826|ref|ZP_07056546.1| 30S ribosomal protein S18 [Bacillus cereus SJ1]
gi|301056946|ref|YP_003795157.1| 30S ribosomal protein S18 [Bacillus anthracis CI]
gi|59798636|sp|Q630D0|RS18_BACCZ RecName: Full=30S ribosomal protein S18
gi|59798712|sp|Q6HAG4|RS18_BACHK RecName: Full=30S ribosomal protein S18
gi|59798878|sp|Q81JI4|RS18_BACAN RecName: Full=30S ribosomal protein S18
gi|166220922|sp|A0RLQ1|RS18_BACAH RecName: Full=30S ribosomal protein S18
gi|226735107|sp|B7JIJ9|RS18_BACC0 RecName: Full=30S ribosomal protein S18
gi|229564239|sp|A9VTK8|RS18_BACWK RecName: Full=30S ribosomal protein S18
gi|254765406|sp|C3P3E3|RS18_BACAA RecName: Full=30S ribosomal protein S18
gi|254765407|sp|C3LGS9|RS18_BACAC RecName: Full=30S ribosomal protein S18
gi|254765408|sp|C1ER65|RS18_BACC3 RecName: Full=30S ribosomal protein S18
gi|30260168|gb|AAP29353.1| 30S ribosomal protein S18 [Bacillus anthracis str. Ames]
gi|47506206|gb|AAT34882.1| ribosomal protein S18 [Bacillus anthracis str. 'Ames Ancestor']
gi|49182236|gb|AAT57612.1| ribosomal protein S18 [Bacillus anthracis str. Sterne]
gi|49332760|gb|AAT63406.1| ribosomal protein S18 (30S ribosomal protein S18) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978749|gb|AAU20299.1| ribosomal protein S18 (30S ribosomal protein S18) [Bacillus
cereus E33L]
gi|118419725|gb|ABK88144.1| SSU ribosomal protein S18P [Bacillus thuringiensis str. Al Hakam]
gi|163865349|gb|ABY46408.1| ribosomal protein S18 [Bacillus weihenstephanensis KBAB4]
gi|164711247|gb|EDR16803.1| ribosomal protein S18 [Bacillus anthracis str. A0488]
gi|167510312|gb|EDR85715.1| ribosomal protein S18 [Bacillus anthracis str. A0193]
gi|167529549|gb|EDR92299.1| ribosomal protein S18 [Bacillus anthracis str. A0442]
gi|170127546|gb|EDS96420.1| ribosomal protein S18 [Bacillus anthracis str. A0389]
gi|170666560|gb|EDT17333.1| ribosomal protein S18 [Bacillus anthracis str. A0465]
gi|172080211|gb|EDT65303.1| ribosomal protein S18 [Bacillus anthracis str. A0174]
gi|190559607|gb|EDV13598.1| ribosomal protein S18 [Bacillus anthracis Tsiankovskii-I]
gi|195991241|gb|EDX55209.1| ribosomal protein S18 [Bacillus cereus W]
gi|196023678|gb|EDX62354.1| ribosomal protein S18 [Bacillus cereus 03BB108]
gi|196027235|gb|EDX65855.1| ribosomal protein S18 [Bacillus cereus NVH0597-99]
gi|218539261|gb|ACK91659.1| ribosomal protein S18 [Bacillus cereus AH820]
gi|225787551|gb|ACO27768.1| 30S ribosomal protein S18 [Bacillus cereus 03BB102]
gi|227005264|gb|ACP15007.1| 30S ribosomal protein S18 [Bacillus anthracis str. CDC 684]
gi|228595769|gb|EEK53453.1| 30S ribosomal protein S18 [Bacillus cereus BGSC 6E1]
gi|228613276|gb|EEK70415.1| 30S ribosomal protein S18 [Bacillus cereus AH621]
gi|228658476|gb|EEL14142.1| 30S ribosomal protein S18 [Bacillus cereus 95/8201]
gi|228664487|gb|EEL19983.1| 30S ribosomal protein S18 [Bacillus cereus Rock1-3]
gi|228683514|gb|EEL37469.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-29]
gi|228688830|gb|EEL42661.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-42]
gi|228695344|gb|EEL48221.1| 30S ribosomal protein S18 [Bacillus cereus Rock3-44]
gi|228728196|gb|EEL79226.1| 30S ribosomal protein S18 [Bacillus cereus AH1271]
gi|228753462|gb|EEM02914.1| 30S ribosomal protein S18 [Bacillus mycoides Rock1-4]
gi|228759593|gb|EEM08570.1| 30S ribosomal protein S18 [Bacillus mycoides Rock3-17]
gi|228765643|gb|EEM14297.1| 30S ribosomal protein S18 [Bacillus pseudomycoides DSM 12442]
gi|228810477|gb|EEM56830.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822961|gb|EEM68802.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829197|gb|EEM74834.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841564|gb|EEM86680.1| 30S ribosomal protein S18 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268511|gb|ACQ50148.1| 30S ribosomal protein S18 [Bacillus anthracis str. A0248]
gi|298723794|gb|EFI64516.1| 30S ribosomal protein S18 [Bacillus cereus SJ1]
gi|300379115|gb|ADK08019.1| 30S ribosomal protein S18 [Bacillus cereus biovar anthracis str.
CI]
Length = 77
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR
Sbjct: 8 RAKRRKVCFFTSNGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRAR 67
Query: 74 YLGLIAYVN 82
+ L+ YV
Sbjct: 68 QMALLPYVG 76
>gi|222085435|ref|YP_002543965.1| ribosomal protein S18 [Agrobacterium radiobacter K84]
gi|254765402|sp|B9JCB8|RS18_AGRRK RecName: Full=30S ribosomal protein S18
gi|221722883|gb|ACM26039.1| ribosomal protein S18 [Agrobacterium radiobacter K84]
Length = 82
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+EV+ P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEVSSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|50812313|ref|NP_391969.2| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312071|ref|ZP_03593918.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|221316396|ref|ZP_03598201.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221321309|ref|ZP_03602603.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221325592|ref|ZP_03606886.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|296330018|ref|ZP_06872502.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676742|ref|YP_003868414.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|321313649|ref|YP_004205936.1| 30S ribosomal protein S18 [Bacillus subtilis BSn5]
gi|585940|sp|P21475|RS18_BACSU RecName: Full=30S ribosomal protein S18; AltName: Full=BS21
gi|32468848|emb|CAB16126.2| ribosomal protein S18 [Bacillus subtilis subsp. subtilis str.
168]
gi|296153057|gb|EFG93922.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414986|gb|ADM40105.1| 30S ribosomal protein S18 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|320019923|gb|ADV94909.1| 30S ribosomal protein S18 [Bacillus subtilis BSn5]
Length = 79
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 15 VCYFTSNGITHIDYKDVDLLKKFVSERGKILPRRVTGTNAKYQRKLTAAIKRARQMALLP 74
Query: 80 YVN 82
YV+
Sbjct: 75 YVS 77
>gi|253999141|ref|YP_003051204.1| 30S ribosomal protein S18 [Methylovorus sp. SIP3-4]
gi|313201242|ref|YP_004039900.1| 30S ribosomal protein S18 [Methylovorus sp. MP688]
gi|253985820|gb|ACT50677.1| ribosomal protein S18 [Methylovorus sp. SIP3-4]
gi|312440558|gb|ADQ84664.1| ribosomal protein S18 [Methylovorus sp. MP688]
Length = 75
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ LL F+++ GKI+P+RI+ + QR+L A+
Sbjct: 1 MARDMFKRRRYCRFSAEGIKEVDYKDVDLLKDFINENGKIIPARITGTKARYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|329297941|ref|ZP_08255277.1| 30S ribosomal protein S18 [Plautia stali symbiont]
Length = 75
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTCAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|206901836|ref|YP_002251075.1| ribosomal protein S18 [Dictyoglomus thermophilum H-6-12]
gi|254765427|sp|B5YEW7|RS18_DICT6 RecName: Full=30S ribosomal protein S18
gi|206740939|gb|ACI19997.1| ribosomal protein S18 [Dictyoglomus thermophilum H-6-12]
Length = 84
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E T + S ++K C + IDYK++ L RF++++GKI+P RIS + Q
Sbjct: 4 EKTSTKAPKFTYSSKKKFCVFCSEKIDYIDYKNVERLKRFMTEKGKIIPRRISGNCARHQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R+L+ AIKRARY+ L+ YV
Sbjct: 64 RQLSTAIKRARYMALLPYV 82
>gi|298291082|ref|YP_003693021.1| ribosomal protein S18 [Starkeya novella DSM 506]
gi|296927593|gb|ADH88402.1| ribosomal protein S18 [Starkeya novella DSM 506]
Length = 88
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 16 RRPFFRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELAQAIK 75
Query: 71 RARYLGLIAYV 81
RAR+LGL+ +V
Sbjct: 76 RARFLGLLPFV 86
>gi|167755264|ref|ZP_02427391.1| hypothetical protein CLORAM_00769 [Clostridium ramosum DSM 1402]
gi|237735012|ref|ZP_04565493.1| 30S ribosomal protein S18 [Mollicutes bacterium D7]
gi|167705314|gb|EDS19893.1| hypothetical protein CLORAM_00769 [Clostridium ramosum DSM 1402]
gi|229381788|gb|EEO31879.1| 30S ribosomal protein S18 [Coprobacillus sp. D7]
Length = 76
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ R+K C + IDYKD+ LL RF+S GKI+P R++ S K QR LA AI
Sbjct: 3 FRKQRMGRKKVCYFTKNKITYIDYKDVELLKRFVSANGKIIPRRVTGTSAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|302669612|ref|YP_003829572.1| ribosomal protein S18 RpsR [Butyrivibrio proteoclasticus B316]
gi|302394085|gb|ADL32990.1| ribosomal protein S18 RpsR [Butyrivibrio proteoclasticus B316]
Length = 87
Score = 119 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 2 AEVAPTPLLRRN-VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
++ + P+ R+ + R+K C G IDYKD L +F+S+ GKI+P RI+ K
Sbjct: 6 SDKSDAPMRRKGGMHRRKKVCVFCG-KDNVIDYKDTAKLKKFVSESGKILPRRITGNCAK 64
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QREL A+KRAR+L L+ YV
Sbjct: 65 HQRELTSAVKRARHLALMPYV 85
>gi|291542457|emb|CBL15567.1| SSU ribosomal protein S18P [Ruminococcus bromii L2-63]
Length = 79
Score = 119 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P+ R R+K C IDYKDI L R++S+RGKI+P R++ + QR
Sbjct: 1 MADRPM-NRGRKARKKVCGFCVDKVENIDYKDIARLRRYMSERGKILPRRVTGTCARHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
EL AIKRAR+L L+ Y
Sbjct: 60 ELTVAIKRARHLALLPYT 77
>gi|119897011|ref|YP_932224.1| 30S ribosomal protein S18 [Azoarcus sp. BH72]
gi|237654323|ref|YP_002890637.1| 30S ribosomal protein S18 [Thauera sp. MZ1T]
gi|119669424|emb|CAL93337.1| 30S ribosomal protein S18 [Azoarcus sp. BH72]
gi|237625570|gb|ACR02260.1| ribosomal protein S18 [Thauera sp. MZ1T]
Length = 91
Score = 119 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKD+ +L F+++ KI+P+RI+ QR+L+ A+KR
Sbjct: 18 RGLFKRRKFCRFTAEKIEEVDYKDVDILKDFITENAKIMPARITGTKAGYQRQLSVAVKR 77
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 78 ARFLALMPYTDL 89
>gi|154688193|ref|YP_001423354.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens FZB42]
gi|308175795|ref|YP_003922500.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens DSM 7]
gi|154354044|gb|ABS76123.1| RpsR [Bacillus amyloliquefaciens FZB42]
gi|307608659|emb|CBI45030.1| ribosomal protein S18 [Bacillus amyloliquefaciens DSM 7]
Length = 81
Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 17 VCYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLP 76
Query: 80 YVN 82
YV
Sbjct: 77 YVT 79
>gi|157373898|ref|YP_001472498.1| ribosomal protein S18 [Shewanella sediminis HAW-EB3]
gi|157963398|ref|YP_001503432.1| 30S ribosomal protein S18 [Shewanella pealeana ATCC 700345]
gi|163749305|ref|ZP_02156554.1| ribosomal protein S18 [Shewanella benthica KT99]
gi|167625579|ref|YP_001675873.1| 30S ribosomal protein S18 [Shewanella halifaxensis HAW-EB4]
gi|170728535|ref|YP_001762561.1| 30S ribosomal protein S18 [Shewanella woodyi ATCC 51908]
gi|212633591|ref|YP_002310116.1| 30S ribosomal protein S18 [Shewanella piezotolerans WP3]
gi|294139216|ref|YP_003555194.1| 30S ribosomal protein S18 [Shewanella violacea DSS12]
gi|189029688|sp|B0TUU7|RS18_SHEHH RecName: Full=30S ribosomal protein S18
gi|189029689|sp|A8H8L0|RS18_SHEPA RecName: Full=30S ribosomal protein S18
gi|189029690|sp|A8FR97|RS18_SHESH RecName: Full=30S ribosomal protein S18
gi|226735124|sp|B8CIQ3|RS18_SHEPW RecName: Full=30S ribosomal protein S18
gi|229560073|sp|B1KHY8|RS18_SHEWM RecName: Full=30S ribosomal protein S18
gi|157316272|gb|ABV35370.1| ribosomal protein S18 [Shewanella sediminis HAW-EB3]
gi|157848398|gb|ABV88897.1| ribosomal protein S18 [Shewanella pealeana ATCC 700345]
gi|161331024|gb|EDQ01950.1| ribosomal protein S18 [Shewanella benthica KT99]
gi|167355601|gb|ABZ78214.1| ribosomal protein S18 [Shewanella halifaxensis HAW-EB4]
gi|169813882|gb|ACA88466.1| ribosomal protein S18 [Shewanella woodyi ATCC 51908]
gi|212555075|gb|ACJ27529.1| Ribosomal protein S18 [Shewanella piezotolerans WP3]
gi|293325685|dbj|BAJ00416.1| ribosomal protein S18 [Shewanella violacea DSS12]
Length = 75
Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ + K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVTEIDYKDIVTLKNYITESGKIVPSRITGTNAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|53803659|ref|YP_114469.1| 30S ribosomal protein S18 [Methylococcus capsulatus str. Bath]
gi|59798627|sp|Q606H9|RS18_METCA RecName: Full=30S ribosomal protein S18
gi|53757420|gb|AAU91711.1| ribosomal protein S18 [Methylococcus capsulatus str. Bath]
Length = 76
Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ C + + IDYKD+ L ++S+ GKIVPSRI+ S K QR+LA AIKRAR+
Sbjct: 5 FKRRRYCRFTAEDVKEIDYKDLDTLREYVSETGKIVPSRITGTSAKYQRQLATAIKRARF 64
Query: 75 LGLIAYVN 82
L L+ + +
Sbjct: 65 LALLPFCD 72
>gi|229542337|ref|ZP_04431397.1| ribosomal protein S18 [Bacillus coagulans 36D1]
gi|229326757|gb|EEN92432.1| ribosomal protein S18 [Bacillus coagulans 36D1]
Length = 79
Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 14 VCYFTANHITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTTAIKRARQMALLP 73
Query: 80 YV 81
YV
Sbjct: 74 YV 75
>gi|254481140|ref|ZP_05094386.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2148]
gi|214038935|gb|EEB79596.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2148]
Length = 75
Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA A+KRA
Sbjct: 3 RFFRRRKFCKFTAEGVKEIDYKDLETLKAYVSETGKIVPSRITGTKAKYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYTD 72
>gi|117925749|ref|YP_866366.1| 30S ribosomal protein S18P [Magnetococcus sp. MC-1]
gi|205558242|sp|A0LAG7|RS18_MAGSM RecName: Full=30S ribosomal protein S18
gi|117609505|gb|ABK44960.1| SSU ribosomal protein S18P [Magnetococcus sp. MC-1]
Length = 106
Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR RRK CP +IDYKD ++L+R++++RGK+VPSRI+ V QR+L
Sbjct: 29 PLASARRPFFRRRKVCPFCADKGLKIDYKDPKMLSRYITERGKMVPSRITGVCAPHQRKL 88
Query: 66 AKAIKRARYLGLIAYV 81
+ AIKRAR + L+ ++
Sbjct: 89 SVAIKRARNIALLPFI 104
>gi|167747438|ref|ZP_02419565.1| hypothetical protein ANACAC_02158 [Anaerostipes caccae DSM 14662]
gi|317471167|ref|ZP_07930538.1| ribosomal protein S18 [Anaerostipes sp. 3_2_56FAA]
gi|167652800|gb|EDR96929.1| hypothetical protein ANACAC_02158 [Anaerostipes caccae DSM 14662]
gi|316901382|gb|EFV23325.1| ribosomal protein S18 [Anaerostipes sp. 3_2_56FAA]
Length = 84
Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + IDYKD+ L +++S+RGKI+P RI+ K QR + AIKRAR+L L+
Sbjct: 20 KVCAFCTEADAVIDYKDVATLKKYVSERGKILPRRITGTCAKHQRAVTSAIKRARHLALM 79
Query: 79 AYV 81
Y
Sbjct: 80 PYT 82
>gi|16799118|ref|NP_469386.1| 30S ribosomal protein S18 [Listeria innocua Clip11262]
gi|16802094|ref|NP_463579.1| 30S ribosomal protein S18 [Listeria monocytogenes EGD-e]
gi|46906277|ref|YP_012666.1| 30S ribosomal protein S18 [Listeria monocytogenes serotype 4b
str. F2365]
gi|47092171|ref|ZP_00229963.1| ribosomal protein S18 [Listeria monocytogenes str. 4b H7858]
gi|47095114|ref|ZP_00232726.1| ribosomal protein S18 [Listeria monocytogenes str. 1/2a F6854]
gi|116871459|ref|YP_848240.1| 30S ribosomal protein S18 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217965895|ref|YP_002351573.1| ribosomal protein S18 [Listeria monocytogenes HCC23]
gi|224498256|ref|ZP_03666605.1| 30S ribosomal protein S18 [Listeria monocytogenes Finland 1988]
gi|224503029|ref|ZP_03671336.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL R2-561]
gi|226222691|ref|YP_002756798.1| ribosomal protein S18 [Listeria monocytogenes Clip81459]
gi|254824725|ref|ZP_05229726.1| rpsR [Listeria monocytogenes FSL J1-194]
gi|254827477|ref|ZP_05232164.1| ribosomal protein S18 [Listeria monocytogenes FSL N3-165]
gi|254830661|ref|ZP_05235316.1| 30S ribosomal protein S18 [Listeria monocytogenes 10403S]
gi|254851788|ref|ZP_05241136.1| rpsR [Listeria monocytogenes FSL R2-503]
gi|254899633|ref|ZP_05259557.1| 30S ribosomal protein S18 [Listeria monocytogenes J0161]
gi|254913164|ref|ZP_05263176.1| ribosomal protein S18 [Listeria monocytogenes J2818]
gi|254930815|ref|ZP_05264174.1| ribosomal protein S18 [Listeria monocytogenes HPB2262]
gi|254937545|ref|ZP_05269242.1| ribosomal protein S18 [Listeria monocytogenes F6900]
gi|254992264|ref|ZP_05274454.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J2-064]
gi|255017794|ref|ZP_05289920.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL F2-515]
gi|255022435|ref|ZP_05294421.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J1-208]
gi|255025177|ref|ZP_05297163.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J2-003]
gi|255030368|ref|ZP_05302319.1| 30S ribosomal protein S18 [Listeria monocytogenes LO28]
gi|255519953|ref|ZP_05387190.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL J1-175]
gi|284803213|ref|YP_003415078.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5578]
gi|284996354|ref|YP_003418122.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5923]
gi|289433406|ref|YP_003463278.1| 30S ribosomal protein S18 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|290892370|ref|ZP_06555365.1| ribosomal protein S18 [Listeria monocytogenes FSL J2-071]
gi|300765696|ref|ZP_07075673.1| ribosomal protein S18 [Listeria monocytogenes FSL N1-017]
gi|54039413|sp|P66462|RS18_LISIN RecName: Full=30S ribosomal protein S18
gi|54042148|sp|P66461|RS18_LISMO RecName: Full=30S ribosomal protein S18
gi|59798761|sp|Q725B8|RS18_LISMF RecName: Full=30S ribosomal protein S18
gi|123463368|sp|A0AEM3|RS18_LISW6 RecName: Full=30S ribosomal protein S18
gi|254812945|sp|B8DAM0|RS18_LISMH RecName: Full=30S ribosomal protein S18
gi|259494813|sp|C1KV87|RS18_LISMC RecName: Full=30S ribosomal protein S18
gi|16409405|emb|CAC98261.1| ribosomal protein S18 [Listeria monocytogenes EGD-e]
gi|16412460|emb|CAC95272.1| ribosomal protein S18 [Listeria innocua Clip11262]
gi|46879541|gb|AAT02843.1| ribosomal protein S18 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016459|gb|EAL07380.1| ribosomal protein S18 [Listeria monocytogenes str. 1/2a F6854]
gi|47019373|gb|EAL10114.1| ribosomal protein S18 [Listeria monocytogenes str. 4b H7858]
gi|116740337|emb|CAK19455.1| 30S ribosomal protein S18 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217335165|gb|ACK40959.1| ribosomal protein S18 [Listeria monocytogenes HCC23]
gi|225875153|emb|CAS03845.1| ribosomal protein S18 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258599854|gb|EEW13179.1| ribosomal protein S18 [Listeria monocytogenes FSL N3-165]
gi|258605081|gb|EEW17689.1| rpsR [Listeria monocytogenes FSL R2-503]
gi|258610146|gb|EEW22754.1| ribosomal protein S18 [Listeria monocytogenes F6900]
gi|284058775|gb|ADB69716.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5578]
gi|284061821|gb|ADB72760.1| 30S ribosomal protein S18 [Listeria monocytogenes 08-5923]
gi|289169650|emb|CBH26186.1| 30S ribosomal protein S18 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|290558196|gb|EFD91715.1| ribosomal protein S18 [Listeria monocytogenes FSL J2-071]
gi|293582357|gb|EFF94389.1| ribosomal protein S18 [Listeria monocytogenes HPB2262]
gi|293591165|gb|EFF99499.1| ribosomal protein S18 [Listeria monocytogenes J2818]
gi|293593964|gb|EFG01725.1| rpsR [Listeria monocytogenes FSL J1-194]
gi|300513569|gb|EFK40639.1| ribosomal protein S18 [Listeria monocytogenes FSL N1-017]
gi|307569562|emb|CAR82741.1| rpsR [Listeria monocytogenes L99]
gi|328468374|gb|EGF39380.1| 30S ribosomal protein S18 [Listeria monocytogenes 1816]
gi|328476182|gb|EGF46888.1| 30S ribosomal protein S18 [Listeria monocytogenes 220]
gi|332310392|gb|EGJ23487.1| 30S ribosomal protein S18 [Listeria monocytogenes str. Scott A]
Length = 79
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIKR+R + L
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMAL 71
Query: 78 IAYV 81
+ +V
Sbjct: 72 LPFV 75
>gi|218135342|ref|ZP_03464146.1| hypothetical protein BACPEC_03247 [Bacteroides pectinophilus ATCC
43243]
gi|217990727|gb|EEC56738.1| hypothetical protein BACPEC_03247 [Bacteroides pectinophilus ATCC
43243]
Length = 90
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A T + RR + R+K C + IDYKD+ LL R++S+RGKI+P RI+ K
Sbjct: 9 GDKAETQMRRRPMRRRKKVCIFCADQSKAIDYKDVNLLKRYVSERGKILPRRITGNCAKH 68
Query: 62 QRELAKAIKRARYLGLIAY 80
QR L A+KRAR++ L+ Y
Sbjct: 69 QRALTVAVKRARHIALMPY 87
>gi|217967743|ref|YP_002353249.1| ribosomal protein S18 [Dictyoglomus turgidum DSM 6724]
gi|254765428|sp|B8E0J0|RS18_DICTD RecName: Full=30S ribosomal protein S18
gi|217336842|gb|ACK42635.1| ribosomal protein S18 [Dictyoglomus turgidum DSM 6724]
Length = 84
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E A T + ++K C + IDYK++ L RF++++GKI+P RIS + Q
Sbjct: 4 EKASTKAPKFAYPSKKKYCIFCSEKIDYIDYKNVERLKRFMTEKGKIIPRRISGNCARHQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R+L+ AIKRARY+ L+ YV
Sbjct: 64 RQLSTAIKRARYMALLPYV 82
>gi|91791881|ref|YP_561532.1| 30S ribosomal protein S18 [Shewanella denitrificans OS217]
gi|123166502|sp|Q12RW7|RS18_SHEDO RecName: Full=30S ribosomal protein S18
gi|91713883|gb|ABE53809.1| SSU ribosomal protein S18P [Shewanella denitrificans OS217]
Length = 75
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTSEGVAEIDYKDIVTLKNYITESGKIVPSRITGTSAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|255284244|ref|ZP_05348799.1| ribosomal protein S18 [Bryantella formatexigens DSM 14469]
gi|255265197|gb|EET58402.1| ribosomal protein S18 [Bryantella formatexigens DSM 14469]
Length = 87
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GDRADSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGTCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR+L ++ YV
Sbjct: 66 QRSLTVAIKRARHLAMMPYV 85
>gi|205562353|sp|A7ZAU7|RS18_BACA2 RecName: Full=30S ribosomal protein S18
gi|328555771|gb|AEB26263.1| 30S ribosomal protein S18 [Bacillus amyloliquefaciens TA208]
Length = 79
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIKRAR + L+
Sbjct: 15 VCYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTIAIKRARQMALLP 74
Query: 80 YVN 82
YV
Sbjct: 75 YVT 77
>gi|15964890|ref|NP_385243.1| 30S ribosomal protein S18 [Sinorhizobium meliloti 1021]
gi|150395964|ref|YP_001326431.1| 30S ribosomal protein S18 [Sinorhizobium medicae WSM419]
gi|307300961|ref|ZP_07580730.1| ribosomal protein S18 [Sinorhizobium meliloti BL225C]
gi|307322231|ref|ZP_07601599.1| ribosomal protein S18 [Sinorhizobium meliloti AK83]
gi|20978707|sp|Q92QZ8|RS18_RHIME RecName: Full=30S ribosomal protein S18
gi|166222244|sp|A6U7G6|RS18_SINMW RecName: Full=30S ribosomal protein S18
gi|15074069|emb|CAC45716.1| Putative 30S ribosomal protein S18 [Sinorhizobium meliloti 1021]
gi|150027479|gb|ABR59596.1| ribosomal protein S18 [Sinorhizobium medicae WSM419]
gi|306892118|gb|EFN22936.1| ribosomal protein S18 [Sinorhizobium meliloti AK83]
gi|306903916|gb|EFN34502.1| ribosomal protein S18 [Sinorhizobium meliloti BL225C]
Length = 82
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ Y+
Sbjct: 60 KQRELAQAIKRARFLGLLPYI 80
>gi|317502276|ref|ZP_07960447.1| ribosomal protein S18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896321|gb|EFV18421.1| ribosomal protein S18 [Lachnospiraceae bacterium 8_1_57FAA]
Length = 88
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RGPARRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHIALMPYV 86
>gi|205620144|sp|Q3SH33|RS18_THIDA RecName: Full=30S ribosomal protein S18
Length = 91
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + RRK C + + +DYKD+ +L F+++ G+I+P+RI+ QR+L AIK
Sbjct: 18 NRGLFKRRKFCRFTAEKVVEVDYKDVDVLKEFIAENGRIIPARITGTKAHYQRQLGTAIK 77
Query: 71 RARYLGLIAYVNL 83
RAR+L L+ Y +L
Sbjct: 78 RARFLALMPYTDL 90
>gi|166030697|ref|ZP_02233526.1| hypothetical protein DORFOR_00371 [Dorea formicigenerans ATCC
27755]
gi|166029489|gb|EDR48246.1| hypothetical protein DORFOR_00371 [Dorea formicigenerans ATCC
27755]
Length = 88
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RNPGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHVALMPYV 86
>gi|116251320|ref|YP_767158.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. viciae
3841]
gi|209548656|ref|YP_002280573.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|241203934|ref|YP_002975030.1| 30S ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|122988597|sp|Q1MJ11|RS18_RHIL3 RecName: Full=30S ribosomal protein S18
gi|229560056|sp|B5ZWC8|RS18_RHILW RecName: Full=30S ribosomal protein S18
gi|115255968|emb|CAK07049.1| putative 30S ribosomal protein S18 [Rhizobium leguminosarum bv.
viciae 3841]
gi|209534412|gb|ACI54347.1| ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|240857824|gb|ACS55491.1| ribosomal protein S18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 82
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E + P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSETSSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|312113718|ref|YP_004011314.1| ribosomal protein S18 [Rhodomicrobium vannielii ATCC 17100]
gi|311218847|gb|ADP70215.1| ribosomal protein S18 [Rhodomicrobium vannielii ATCC 17100]
Length = 83
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 64/81 (79%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+ + RR RRK+CP SG+ AP IDYKD+RLL RF+S+RGKIVPSRI++VS K
Sbjct: 1 MSMQGTSGGARRPFYRRRKTCPFSGENAPVIDYKDVRLLQRFVSERGKIVPSRITAVSAK 60
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 61 KQRELAKAIKRARFLGLLPYV 81
>gi|225023646|ref|ZP_03712838.1| hypothetical protein EIKCOROL_00509 [Eikenella corrodens ATCC
23834]
gi|224943528|gb|EEG24737.1| hypothetical protein EIKCOROL_00509 [Eikenella corrodens ATCC
23834]
Length = 76
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + +G ++DYK + LL F+S+ GKI+P+RI+ QR+L+ A+
Sbjct: 1 MARQTFKRRKFCRFTAEGIKQVDYKSVDLLKDFISENGKIIPARITGTKAHYQRQLSVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|310830125|ref|YP_003962482.1| hypothetical protein ELI_4585 [Eubacterium limosum KIST612]
gi|308741859|gb|ADO39519.1| hypothetical protein ELI_4585 [Eubacterium limosum KIST612]
Length = 75
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + +DYKD+ L +++S+RGKI+P R + K QR++ +A+
Sbjct: 1 MPKPFKRRRKVCEFCERHETEVDYKDVATLKKYISERGKILPRRATGTCAKHQRKVTEAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y +
Sbjct: 61 KRARNIALLPYTS 73
>gi|124009489|ref|ZP_01694165.1| ribosomal protein S18 [Microscilla marina ATCC 23134]
gi|123984938|gb|EAY24901.1| ribosomal protein S18 [Microscilla marina ATCC 23134]
Length = 83
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++ +GKI+P RI+ S K QR++++A+KRAR+
Sbjct: 12 ENRKKYCRFKKNGIKYIDYKDPNFLLKFVNDQGKILPRRITGTSLKYQRKVSQAVKRARH 71
Query: 75 LGLIAYVN 82
L L+ YV
Sbjct: 72 LALLPYVT 79
>gi|86357077|ref|YP_468969.1| 30S ribosomal protein S18 [Rhizobium etli CFN 42]
gi|190891121|ref|YP_001977663.1| 30S ribosomal protein S18 [Rhizobium etli CIAT 652]
gi|123724812|sp|Q2KA94|RS18_RHIEC RecName: Full=30S ribosomal protein S18
gi|229560055|sp|B3PUT6|RS18_RHIE6 RecName: Full=30S ribosomal protein S18
gi|86281179|gb|ABC90242.1| 30S ribosomal protein S18 [Rhizobium etli CFN 42]
gi|190696400|gb|ACE90485.1| 30S ribosomal protein S18 [Rhizobium etli CIAT 652]
gi|327188000|gb|EGE55230.1| 30S ribosomal protein S18 [Rhizobium etli CNPAF512]
Length = 82
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E + P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEASSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|56708146|ref|YP_170042.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670617|ref|YP_667174.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis FSC198]
gi|118497542|ref|YP_898592.1| 30S ribosomal protein S18 [Francisella tularensis subsp. novicida
U112]
gi|134301959|ref|YP_001121928.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931624|ref|YP_001891608.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457242|ref|ZP_03665715.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370630|ref|ZP_04986635.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254372903|ref|ZP_04988392.1| 30S ribosomal protein S18 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374357|ref|ZP_04989839.1| hypothetical protein FTDG_00524 [Francisella novicida GA99-3548]
gi|254874949|ref|ZP_05247659.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|81677050|sp|Q5NG00|RS18_FRATT RecName: Full=30S ribosomal protein S18
gi|122970929|sp|Q14HF2|RS18_FRAT1 RecName: Full=30S ribosomal protein S18
gi|205558096|sp|A0Q6H3|RS18_FRATN RecName: Full=30S ribosomal protein S18
gi|205558144|sp|A4IY06|RS18_FRATW RecName: Full=30S ribosomal protein S18
gi|56604638|emb|CAG45694.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320950|emb|CAL09077.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis FSC198]
gi|118423448|gb|ABK89838.1| 30S ribosomal protein S18 [Francisella novicida U112]
gi|134049736|gb|ABO46807.1| ribosomal protein S18 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568873|gb|EDN34527.1| hypothetical protein FTBG_00419 [Francisella tularensis subsp.
tularensis FSC033]
gi|151570630|gb|EDN36284.1| 30S ribosomal protein S18 [Francisella novicida GA99-3549]
gi|151572077|gb|EDN37731.1| hypothetical protein FTDG_00524 [Francisella novicida GA99-3548]
gi|187712533|gb|ACD30830.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840948|gb|EET19384.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159352|gb|ADA78743.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
tularensis NE061598]
gi|332184104|gb|AEE26358.1| SSU ribosomal protein S18p [Francisella cf. novicida 3523]
gi|332678241|gb|AEE87370.1| SSU ribosomal protein S18p [Francisella cf. novicida Fx1]
Length = 72
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|158520026|ref|YP_001527896.1| ribosomal protein S18 [Desulfococcus oleovorans Hxd3]
gi|205557251|sp|A8ZRQ2|RS18_DESOH RecName: Full=30S ribosomal protein S18
gi|158508852|gb|ABW65819.1| ribosomal protein S18 [Desulfococcus oleovorans Hxd3]
Length = 83
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ P+P ++ V HRRK C + IDYK+ + L F+++RGKI+P RIS K QR
Sbjct: 1 MNPSPRGKKRVFHRRKYCRFCADSSLPIDYKNPKSLKSFITERGKIIPRRISGTCAKHQR 60
Query: 64 ELAKAIKRARYLGLIAYVN 82
+ + IKRAR + L+ YV
Sbjct: 61 AITREIKRARTIALLPYVG 79
>gi|119471281|ref|ZP_01613784.1| 30S ribosomal subunit protein S18 [Alteromonadales bacterium
TW-7]
gi|119445747|gb|EAW27030.1| 30S ribosomal subunit protein S18 [Alteromonadales bacterium
TW-7]
Length = 75
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRA
Sbjct: 3 RYFRRRKFCRFKAEGVQQIDYKDLATLRNYVTESGKIVPSRITGTSAKFQRQLATAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|154503456|ref|ZP_02040516.1| hypothetical protein RUMGNA_01280 [Ruminococcus gnavus ATCC
29149]
gi|153795556|gb|EDN77976.1| hypothetical protein RUMGNA_01280 [Ruminococcus gnavus ATCC
29149]
Length = 90
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 18 RGPARRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIK 77
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 78 RARHIALMPYV 88
>gi|225386697|ref|ZP_03756461.1| hypothetical protein CLOSTASPAR_00445 [Clostridium asparagiforme
DSM 15981]
gi|225047224|gb|EEG57470.1| hypothetical protein CLOSTASPAR_00445 [Clostridium asparagiforme
DSM 15981]
Length = 89
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L
Sbjct: 24 KKVCVFCGDKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIAL 83
Query: 78 IAYV 81
+ Y
Sbjct: 84 MPYT 87
>gi|21242371|ref|NP_641953.1| 30S ribosomal protein S18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78047218|ref|YP_363393.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|190575040|ref|YP_001972885.1| 30S ribosomal protein S18 [Stenotrophomonas maltophilia K279a]
gi|254524088|ref|ZP_05136143.1| ribosomal protein S18 [Stenotrophomonas sp. SKA14]
gi|285018509|ref|YP_003376220.1| 30s ribosomal subunit protein s18 [Xanthomonas albilineans GPE
PC73]
gi|325928161|ref|ZP_08189370.1| SSU ribosomal protein S18P [Xanthomonas perforans 91-118]
gi|23822134|sp|Q8PM13|RS18_XANAC RecName: Full=30S ribosomal protein S18
gi|123771403|sp|Q3BV20|RS18_XANC5 RecName: Full=30S ribosomal protein S18
gi|229560069|sp|B2FKJ8|RS18_STRMK RecName: Full=30S ribosomal protein S18
gi|21107808|gb|AAM36489.1| 30S ribosomal protein S18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035648|emb|CAJ23339.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|190012962|emb|CAQ46594.1| 30s ribosomal subunit protein S18 [Stenotrophomonas maltophilia
K279a]
gi|219721679|gb|EED40204.1| ribosomal protein S18 [Stenotrophomonas sp. SKA14]
gi|283473727|emb|CBA16230.1| probable 30s ribosomal subunit protein s18 [Xanthomonas
albilineans]
gi|325541457|gb|EGD12990.1| SSU ribosomal protein S18P [Xanthomonas perforans 91-118]
Length = 76
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KRA
Sbjct: 3 KFFRRRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|189425664|ref|YP_001952841.1| 30S ribosomal protein S18 [Geobacter lovleyi SZ]
gi|226735121|sp|B3E6H4|RS18_GEOLS RecName: Full=30S ribosomal protein S18
gi|189421923|gb|ACD96321.1| ribosomal protein S18 [Geobacter lovleyi SZ]
Length = 110
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P ++ RRK C + IDYKD R L F+++RGKIVP RIS K Q
Sbjct: 26 DRGPGGPRKKRPFQRRKVCRFCAEKDTTIDYKDPRTLRYFITERGKIVPRRISGNCSKHQ 85
Query: 63 RELAKAIKRARYLGLIA 79
RE+ +AIKRAR L L+
Sbjct: 86 REITEAIKRARNLALLP 102
>gi|115314809|ref|YP_763532.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica OSU18]
gi|122325175|sp|Q0BLY9|RS18_FRATO RecName: Full=30S ribosomal protein S18
gi|115129708|gb|ABI82895.1| ribosomal protein S18 [Francisella tularensis subsp. holarctica
OSU18]
Length = 72
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYINETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|224542221|ref|ZP_03682760.1| hypothetical protein CATMIT_01396 [Catenibacterium mitsuokai DSM
15897]
gi|224524856|gb|EEF93961.1| hypothetical protein CATMIT_01396 [Catenibacterium mitsuokai DSM
15897]
Length = 76
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK C + IDYKD+ LL RF+S GKI+P R++ S K QR+LA+AI
Sbjct: 3 FRRQRMGRRKVCYFTKNKIDYIDYKDVELLKRFISANGKIIPRRVTGTSAKYQRKLARAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVG 75
>gi|167627911|ref|YP_001678411.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241668463|ref|ZP_04756041.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876997|ref|ZP_05249707.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|205557713|sp|B0U080|RS18_FRAP2 RecName: Full=30S ribosomal protein S18
gi|167597912|gb|ABZ87910.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254843018|gb|EET21432.1| 30S ribosomal protein S18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 72
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVDGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|300311392|ref|YP_003775484.1| 30S ribosomal protein S18 [Herbaspirillum seropedicae SmR1]
gi|300074177|gb|ADJ63576.1| 30S ribosomal subunit S18 protein [Herbaspirillum seropedicae
SmR1]
Length = 94
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++ + + R+K C + G ++DYKD+ L F+ + GKI+P+R++
Sbjct: 10 SKLKNKRQQQNPLFKRKKFCRFTAAGVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAHY 69
Query: 62 QRELAKAIKRARYLGLIAYVNL 83
QR++ AIKRARYL L+ Y +L
Sbjct: 70 QRQVDTAIKRARYLALLPYTDL 91
>gi|258542090|ref|YP_003187523.1| 30S ribosomal protein S18 [Acetobacter pasteurianus IFO 3283-01]
gi|329114157|ref|ZP_08242919.1| 30S ribosomal protein S18 [Acetobacter pomorum DM001]
gi|256633168|dbj|BAH99143.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-01]
gi|256636225|dbj|BAI02194.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-03]
gi|256639280|dbj|BAI05242.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-07]
gi|256642334|dbj|BAI08289.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-22]
gi|256645389|dbj|BAI11337.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-26]
gi|256648444|dbj|BAI14385.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-32]
gi|256651497|dbj|BAI17431.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654488|dbj|BAI20415.1| SSU ribosomal protein S18P [Acetobacter pasteurianus IFO 3283-12]
gi|326696233|gb|EGE47912.1| 30S ribosomal protein S18 [Acetobacter pomorum DM001]
Length = 91
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 63/80 (78%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A P RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KK
Sbjct: 10 AARRPAVGARRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKK 69
Query: 62 QRELAKAIKRARYLGLIAYV 81
QRELA+AIKRAR+L L+ YV
Sbjct: 70 QRELAQAIKRARFLALLPYV 89
>gi|323487706|ref|ZP_08092964.1| ribosomal protein S18 [Planococcus donghaensis MPA1U2]
gi|323398440|gb|EGA91228.1| ribosomal protein S18 [Planococcus donghaensis MPA1U2]
Length = 78
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R+K C + IDYKD LL +F+S+RGKI+P R++ S K QR+L AIK
Sbjct: 4 RRGGKKRKKVCYFTSNNITHIDYKDTDLLKKFISERGKILPRRVTGTSAKWQRKLTIAIK 63
Query: 71 RARYLGLIAYV 81
R+R + L+ +V
Sbjct: 64 RSRIMALLPFV 74
>gi|251800229|ref|YP_003014960.1| ribosomal protein S18 [Paenibacillus sp. JDR-2]
gi|247547855|gb|ACT04874.1| ribosomal protein S18 [Paenibacillus sp. JDR-2]
Length = 94
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 42/69 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIKRAR
Sbjct: 25 RNKRRKVCFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRLLTVAIKRAR 84
Query: 74 YLGLIAYVN 82
+ L+ Y
Sbjct: 85 TVALLPYTT 93
>gi|225574408|ref|ZP_03783018.1| hypothetical protein RUMHYD_02477 [Blautia hydrogenotrophica DSM
10507]
gi|225038376|gb|EEG48622.1| hypothetical protein RUMHYD_02477 [Blautia hydrogenotrophica DSM
10507]
Length = 87
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
E +P+ RR R+K C GK IDYKD+ L R++S+RGKI+P RI+ K
Sbjct: 6 GERPDSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLKRYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ ++ YV
Sbjct: 66 QRALTVAIKRARHMAMMPYV 85
>gi|160940069|ref|ZP_02087414.1| hypothetical protein CLOBOL_04958 [Clostridium bolteae ATCC
BAA-613]
gi|239624860|ref|ZP_04667891.1| ribosomal protein S18 [Clostridiales bacterium 1_7_47_FAA]
gi|158436649|gb|EDP14416.1| hypothetical protein CLOBOL_04958 [Clostridium bolteae ATCC
BAA-613]
gi|239521246|gb|EEQ61112.1| ribosomal protein S18 [Clostridiales bacterium 1_7_47FAA]
Length = 89
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L
Sbjct: 24 KKVCVFCGDKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIAL 83
Query: 78 IAYV 81
+ Y
Sbjct: 84 MPYT 87
>gi|212550375|ref|YP_002308692.1| 30S ribosomal protein S18 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548613|dbj|BAG83281.1| 30S ribosomal protein S18 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 92
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ +R+K C G IDYKD L +FL+++GKI+P RI+ S K Q +A+A+KRA
Sbjct: 19 DTKNRKKYCRFKKNGIKFIDYKDPEFLKKFLNEQGKILPRRITGTSAKFQHRVAQAVKRA 78
Query: 73 RYLGLIAYVN 82
R+L L+ YV
Sbjct: 79 RHLALLPYVT 88
>gi|197302887|ref|ZP_03167939.1| hypothetical protein RUMLAC_01616 [Ruminococcus lactaris ATCC
29176]
gi|197298124|gb|EDY32672.1| hypothetical protein RUMLAC_01616 [Ruminococcus lactaris ATCC
29176]
Length = 88
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R V R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RGPVRRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHISLMPYV 86
>gi|296532305|ref|ZP_06895044.1| 30S ribosomal protein S18 [Roseomonas cervicalis ATCC 49957]
gi|296267381|gb|EFH13267.1| 30S ribosomal protein S18 [Roseomonas cervicalis ATCC 49957]
Length = 93
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 63/81 (77%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+A P RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS K
Sbjct: 10 IAARRPAVGARRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSGK 69
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+L L+ YV
Sbjct: 70 KQRELANAIKRARFLALLPYV 90
>gi|74318121|ref|YP_315861.1| 30S ribosomal protein S18 [Thiobacillus denitrificans ATCC 25259]
gi|74057616|gb|AAZ98056.1| ribosomal protein S18 [Thiobacillus denitrificans ATCC 25259]
Length = 95
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + RRK C + + +DYKD+ +L F+++ G+I+P+RI+ QR+L AIK
Sbjct: 22 NRGLFKRRKFCRFTAEKVVEVDYKDVDVLKEFIAENGRIIPARITGTKAHYQRQLGTAIK 81
Query: 71 RARYLGLIAYVNL 83
RAR+L L+ Y +L
Sbjct: 82 RARFLALMPYTDL 94
>gi|289523469|ref|ZP_06440323.1| ribosomal protein S18 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503161|gb|EFD24325.1| ribosomal protein S18 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 76
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ R K C +DYK++ L RFL++RGKI+P R++ K QR+LA+AIKR
Sbjct: 5 KRRKRRPKVCTFCSNKIEYVDYKNVEQLKRFLTERGKILPHRVTGNCAKHQRQLARAIKR 64
Query: 72 ARYLGLIAYV 81
AR++ L+ +
Sbjct: 65 ARFMALLPFT 74
>gi|300023234|ref|YP_003755845.1| ribosomal protein S18 [Hyphomicrobium denitrificans ATCC 51888]
gi|299525055|gb|ADJ23524.1| ribosomal protein S18 [Hyphomicrobium denitrificans ATCC 51888]
Length = 84
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/82 (65%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Query: 1 MAEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
MAE+A + RR RRK+CP SG+GAP+IDYKD+R L R++S+RGKIVPSRI++VS
Sbjct: 1 MAEIASSGGGARRPFQRRRKTCPFSGEGAPKIDYKDVRTLGRYISERGKIVPSRITAVSA 60
Query: 60 KKQRELAKAIKRARYLGLIAYV 81
KKQRELA+AIKRAR+LGL+ YV
Sbjct: 61 KKQRELAQAIKRARFLGLLPYV 82
>gi|144899044|emb|CAM75908.1| 30S ribosomal protein S18 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 90
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 63/71 (88%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG+GAP+IDYKD +LL+RF+S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 18 RRPFFRRRKTCPFSGEGAPKIDYKDTKLLSRFISERGKIVPSRITAVSAKKQRELAQAIK 77
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 78 RARFLGLLPYV 88
>gi|237748617|ref|ZP_04579097.1| 30S ribosomal protein S18 [Oxalobacter formigenes OXCC13]
gi|229379979|gb|EEO30070.1| 30S ribosomal protein S18 [Oxalobacter formigenes OXCC13]
Length = 94
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + R+K C + G +IDYKDI L F+ + KI+P+R++ QR++ AI
Sbjct: 18 QQNPLFKRKKFCRFTAAGVEQIDYKDIDTLKDFIQENCKIMPARLTGTKAHYQRQVDTAI 77
Query: 70 KRARYLGLIAYVNL 83
KRAR+L L+ Y +L
Sbjct: 78 KRARFLALLPYTSL 91
>gi|110835050|ref|YP_693909.1| 30S ribosomal protein S18 [Alcanivorax borkumensis SK2]
gi|254427140|ref|ZP_05040847.1| ribosomal protein S18 [Alcanivorax sp. DG881]
gi|123149283|sp|Q0VMG1|RS18_ALCBS RecName: Full=30S ribosomal protein S18
gi|110648161|emb|CAL17637.1| 30S ribosomal protein S18 [Alcanivorax borkumensis SK2]
gi|196193309|gb|EDX88268.1| ribosomal protein S18 [Alcanivorax sp. DG881]
Length = 76
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGVEYIDYKDLDTLKAYITETGKIVPSRITGTKARYQRQLASAIKQA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYSD 72
>gi|225075138|ref|ZP_03718337.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens
NRL30031/H210]
gi|241760281|ref|ZP_04758376.1| ribosomal protein S18 [Neisseria flavescens SK114]
gi|261365214|ref|ZP_05978097.1| ribosomal protein S18 [Neisseria mucosa ATCC 25996]
gi|261379686|ref|ZP_05984259.1| ribosomal protein S18 [Neisseria subflava NJ9703]
gi|298368603|ref|ZP_06979921.1| ribosomal protein S18 [Neisseria sp. oral taxon 014 str. F0314]
gi|319637637|ref|ZP_07992403.1| 30S ribosomal protein S18 [Neisseria mucosa C102]
gi|224953622|gb|EEG34831.1| hypothetical protein NEIFLAOT_00138 [Neisseria flavescens
NRL30031/H210]
gi|241319159|gb|EER55637.1| ribosomal protein S18 [Neisseria flavescens SK114]
gi|284797348|gb|EFC52695.1| ribosomal protein S18 [Neisseria subflava NJ9703]
gi|288566476|gb|EFC88036.1| ribosomal protein S18 [Neisseria mucosa ATCC 25996]
gi|298282606|gb|EFI24093.1| ribosomal protein S18 [Neisseria sp. oral taxon 014 str. F0314]
gi|317400792|gb|EFV81447.1| 30S ribosomal protein S18 [Neisseria mucosa C102]
Length = 76
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+S+ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|56477753|ref|YP_159342.1| 30S ribosomal protein S18 [Aromatoleum aromaticum EbN1]
gi|56313796|emb|CAI08441.1| 30S Ribosomal protein S18 [Aromatoleum aromaticum EbN1]
Length = 91
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + RRK C + + +DYKD+ +L F+++ KI+P+RI+ QR+L+ A+K
Sbjct: 17 NRGLFKRRKFCRFTAEKIEEVDYKDVDILKDFVTENSKIMPARITGTKAGYQRQLSTAVK 76
Query: 71 RARYLGLIAYVNL 83
RAR+L L+ Y +L
Sbjct: 77 RARFLALLPYTDL 89
>gi|227824505|ref|ZP_03989337.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
gi|226905004|gb|EEH90922.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
Length = 79
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L +F+++RGKI+P RI+ K QR+L AIKRAR + L+
Sbjct: 15 KVCSFCVDKVEEIDYKDVAKLRKFITERGKILPRRITGTCAKHQRQLTIAIKRARNVALL 74
Query: 79 AYV 81
+
Sbjct: 75 PFT 77
>gi|325261132|ref|ZP_08127870.1| ribosomal protein S18 [Clostridium sp. D5]
gi|324032586|gb|EGB93863.1| ribosomal protein S18 [Clostridium sp. D5]
Length = 88
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RGPARRRKKVCVFCGKENNDIDYKDVVKLKKYISERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHIALMPYV 86
>gi|83311200|ref|YP_421464.1| 30S ribosomal protein S18 [Magnetospirillum magneticum AMB-1]
gi|123768010|sp|Q2W5H0|RS18_MAGMM RecName: Full=30S ribosomal protein S18
gi|82946041|dbj|BAE50905.1| Ribosomal protein S18 [Magnetospirillum magneticum AMB-1]
Length = 92
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/72 (72%), Positives = 64/72 (88%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK+CP SG+GAP+IDYKDI+LL+RF+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 19 QRRPFFRRRKTCPFSGEGAPKIDYKDIKLLSRFISERGKIVPSRITAVSAKKQRELAQAI 78
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ YV
Sbjct: 79 KRARFLGLLPYV 90
>gi|240948272|ref|ZP_04752658.1| 30S ribosomal protein S18 [Actinobacillus minor NM305]
gi|257465547|ref|ZP_05629918.1| 30S ribosomal protein S18 [Actinobacillus minor 202]
gi|240297311|gb|EER47852.1| 30S ribosomal protein S18 [Actinobacillus minor NM305]
gi|257451207|gb|EEV25250.1| 30S ribosomal protein S18 [Actinobacillus minor 202]
Length = 75
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDIATLKNYISENGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|194366361|ref|YP_002028971.1| 30S ribosomal protein S18 [Stenotrophomonas maltophilia R551-3]
gi|229560068|sp|B4SP93|RS18_STRM5 RecName: Full=30S ribosomal protein S18
gi|194349165|gb|ACF52288.1| ribosomal protein S18 [Stenotrophomonas maltophilia R551-3]
Length = 76
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KRA
Sbjct: 3 KFFRRRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|313884313|ref|ZP_07818076.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620466|gb|EFR31892.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
Length = 77
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ LL RF+S +GKI+P R++ K QR L AIKRAR +GL+
Sbjct: 12 KVCYFCANHIDHPDYKDVELLQRFISDKGKILPRRVTGTCAKHQRALTIAIKRARIMGLL 71
Query: 79 AY 80
+
Sbjct: 72 PF 73
>gi|238021237|ref|ZP_04601663.1| hypothetical protein GCWU000324_01135 [Kingella oralis ATCC
51147]
gi|294669620|ref|ZP_06734687.1| hypothetical protein NEIELOOT_01521 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|294788326|ref|ZP_06753569.1| ribosomal protein S18 [Simonsiella muelleri ATCC 29453]
gi|325265837|ref|ZP_08132523.1| 50S ribosomal protein L21 [Kingella denitrificans ATCC 33394]
gi|329119366|ref|ZP_08248052.1| 50S ribosomal protein L21 [Neisseria bacilliformis ATCC BAA-1200]
gi|237868217|gb|EEP69223.1| hypothetical protein GCWU000324_01135 [Kingella oralis ATCC
51147]
gi|291308533|gb|EFE49776.1| hypothetical protein NEIELOOT_01521 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|294483757|gb|EFG31441.1| ribosomal protein S18 [Simonsiella muelleri ATCC 29453]
gi|324982475|gb|EGC18101.1| 50S ribosomal protein L21 [Kingella denitrificans ATCC 33394]
gi|327464511|gb|EGF10810.1| 50S ribosomal protein L21 [Neisseria bacilliformis ATCC BAA-1200]
gi|332970412|gb|EGK09404.1| 50S ribosomal protein L21 [Kingella kingae ATCC 23330]
Length = 76
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+++ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQTFKRRKFCRFTAEKIQEVDYKQVDLLKDFITENGKIIPARITGTKAHYQRQLAVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|82703070|ref|YP_412636.1| 30S ribosomal protein S18 [Nitrosospira multiformis ATCC 25196]
gi|123768178|sp|Q2Y7M7|RS18_NITMU RecName: Full=30S ribosomal protein S18
gi|82411135|gb|ABB75244.1| SSU ribosomal protein S18P [Nitrosospira multiformis ATCC 25196]
Length = 94
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + RRK C + +G +DYKDI LL F+++ GKI+P+RI+ + QR+L+ A++
Sbjct: 21 NRPLFKRRKFCRFTAEGIKTVDYKDIELLKDFINENGKIIPARITGTKSRYQRQLSTAVE 80
Query: 71 RARYLGLIAYVNL 83
RAR+L L+ Y +L
Sbjct: 81 RARFLALLPYTDL 93
>gi|15603043|ref|NP_246115.1| 30S ribosomal protein S18 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|260912756|ref|ZP_05919242.1| 50S ribosomal protein L21 [Pasteurella dagmatis ATCC 43325]
gi|13431845|sp|P57916|RS18_PASMU RecName: Full=30S ribosomal protein S18
gi|12721529|gb|AAK03262.1| RpS18 [Pasteurella multocida subsp. multocida str. Pm70]
gi|260633134|gb|EEX51299.1| 50S ribosomal protein L21 [Pasteurella dagmatis ATCC 43325]
Length = 75
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDVATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|226323516|ref|ZP_03799034.1| hypothetical protein COPCOM_01291 [Coprococcus comes ATCC 27758]
gi|225208200|gb|EEG90554.1| hypothetical protein COPCOM_01291 [Coprococcus comes ATCC 27758]
Length = 87
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+P+ RR R+K C GK IDYKD L +++S+RGKI+P RI+ K QR L
Sbjct: 10 DSPMKRRGGRRRKKVCVFCGKENNEIDYKDTAKLKKYVSERGKILPRRITGNCAKHQRAL 69
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR++ L+ YV
Sbjct: 70 TVAIKRARHIALMPYV 85
>gi|307822879|ref|ZP_07653110.1| ribosomal protein S18 [Methylobacter tundripaludum SV96]
gi|307736483|gb|EFO07329.1| ribosomal protein S18 [Methylobacter tundripaludum SV96]
Length = 75
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C S +G +IDYKD+ LL+ ++++ GKIVPSRI+ S K QR+L AIKRAR++
Sbjct: 6 RRKKFCRFSAEGGTQIDYKDLDLLSDYITETGKIVPSRITGTSAKYQRQLGVAIKRARFI 65
Query: 76 GLIAYVN 82
L+ + +
Sbjct: 66 ALLPFCD 72
>gi|167948932|ref|ZP_02536006.1| 30S ribosomal protein S18 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 74
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + +G IDYKD+ LL ++S+ GKIVPSRI+ K QR+LA AIKRA
Sbjct: 3 RFFRRKKYCRFTAEGITDIDYKDLNLLKAYVSESGKIVPSRITGTKAKYQRQLATAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYSD 72
>gi|197105008|ref|YP_002130385.1| RpsR, ribosomal protein S18 [Phenylobacterium zucineum HLK1]
gi|196478428|gb|ACG77956.1| RpsR, ribosomal protein S18 [Phenylobacterium zucineum HLK1]
Length = 96
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L L+
Sbjct: 32 KVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARFLALL 91
Query: 79 AYV 81
YV
Sbjct: 92 PYV 94
>gi|148260511|ref|YP_001234638.1| 30S ribosomal protein S18 [Acidiphilium cryptum JF-5]
gi|326403703|ref|YP_004283785.1| 30S ribosomal protein S18 [Acidiphilium multivorum AIU301]
gi|205556745|sp|A5FYN7|RS18_ACICJ RecName: Full=30S ribosomal protein S18
gi|146402192|gb|ABQ30719.1| SSU ribosomal protein S18P [Acidiphilium cryptum JF-5]
gi|325050565|dbj|BAJ80903.1| 30S ribosomal protein S18 [Acidiphilium multivorum AIU301]
Length = 95
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 23 RRPFYRRRKACPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELARAIK 82
Query: 71 RARYLGLIAYV 81
RAR+L L+ YV
Sbjct: 83 RARFLALLPYV 93
>gi|260881441|ref|ZP_05404417.2| ribosomal protein S18 [Mitsuokella multacida DSM 20544]
gi|260848791|gb|EEX68798.1| ribosomal protein S18 [Mitsuokella multacida DSM 20544]
Length = 77
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCSFCVDKVDHIDYKDVAKLRRFVTERGKILPRRISGNCAKHQRQVTVAIKRARNIALL 72
Query: 79 AYV 81
+
Sbjct: 73 PFT 75
>gi|15839149|ref|NP_299837.1| 30S ribosomal protein S18 [Xylella fastidiosa 9a5c]
gi|11387104|sp|Q9PAF8|RS18_XYLFA RecName: Full=30S ribosomal protein S18
gi|9107772|gb|AAF85357.1|AE004063_6 30S ribosomal protein S18 [Xylella fastidiosa 9a5c]
Length = 76
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+L A+KRA
Sbjct: 3 KFFRRRKFCKFTAEGIKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLTTAVKRA 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|297569121|ref|YP_003690465.1| ribosomal protein S18 [Desulfurivibrio alkaliphilus AHT2]
gi|296925036|gb|ADH85846.1| ribosomal protein S18 [Desulfurivibrio alkaliphilus AHT2]
Length = 79
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ RRK C + IDYKD++ L FL++RGKI+P RI K QR+L++A
Sbjct: 2 MKRKKYFGRRKVCRFCSDKSLAIDYKDVKTLRGFLTERGKIIPRRIYGNCAKHQRQLSEA 61
Query: 69 IKRARYLGLIAYVN 82
IKRAR + L+ Y
Sbjct: 62 IKRARQIALLPYTG 75
>gi|238897794|ref|YP_002923473.1| 30S ribosomal subunit protein S18 [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|259494812|sp|C4K432|RS18_HAMD5 RecName: Full=30S ribosomal protein S18
gi|229465551|gb|ACQ67325.1| 30S ribosomal subunit protein S18 [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 85
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G +IDYKDI +L ++++ GKIVPSRI+ K QR+LA+AIK A
Sbjct: 3 RYFRRRKFCRFTAEGVKQIDYKDIIMLKNYITESGKIVPSRITGTCSKYQRQLAQAIKVA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|317130989|ref|YP_004097271.1| ribosomal protein S18 [Bacillus cellulosilyticus DSM 2522]
gi|315475937|gb|ADU32540.1| ribosomal protein S18 [Bacillus cellulosilyticus DSM 2522]
Length = 75
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRGRPKRRKVCYFTVNKITSIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
IKR+R + L+ YV
Sbjct: 61 IKRSRTMALLPYVT 74
>gi|323485447|ref|ZP_08090795.1| hypothetical protein HMPREF9474_02546 [Clostridium symbiosum
WAL-14163]
gi|323695065|ref|ZP_08109208.1| ribosomal protein S18 [Clostridium symbiosum WAL-14673]
gi|323401310|gb|EGA93660.1| hypothetical protein HMPREF9474_02546 [Clostridium symbiosum
WAL-14163]
gi|323500867|gb|EGB16786.1| ribosomal protein S18 [Clostridium symbiosum WAL-14673]
Length = 88
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGEKNGVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|291520307|emb|CBK75528.1| SSU ribosomal protein S18P [Butyrivibrio fibrisolvens 16/4]
Length = 84
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + R+K C G IDYKD L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 13 RRPMHRRKKVCVFCG-KDNVIDYKDTAKLKKYISERGKILPRRITGTCAKHQRALTVAIK 71
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 72 RARHVALMPYV 82
>gi|23100932|ref|NP_694399.1| 30S ribosomal protein S18 [Oceanobacillus iheyensis HTE831]
gi|59798907|sp|Q8EKV5|RS18_OCEIH RecName: Full=30S ribosomal protein S18
gi|22779167|dbj|BAC15433.1| 30S ribosomal protein S18 [Oceanobacillus iheyensis HTE831]
Length = 76
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR + L+
Sbjct: 13 VCYFTANGITHIDYKDVDLLRRFISERGKILPRRVTGTSAKYQRKLTIAIKRARTMALLP 72
Query: 80 YV 81
YV
Sbjct: 73 YV 74
>gi|88858916|ref|ZP_01133557.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas tunicata D2]
gi|88819142|gb|EAR28956.1| 30S ribosomal subunit protein S18 [Pseudoalteromonas tunicata D2]
Length = 75
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C +G +IDYKD+ L ++++ GKIVPSRI+ S K QR+LA AIKRA
Sbjct: 3 RYFRRRKFCRFKAEGVQKIDYKDLATLRNYVTESGKIVPSRITGTSAKYQRQLAAAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|319778266|ref|YP_004129179.1| SSU ribosomal protein S18p [Taylorella equigenitalis MCE9]
gi|317108290|gb|ADU91036.1| SSU ribosomal protein S18p [Taylorella equigenitalis MCE9]
Length = 91
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + G IDYKDI L F+++ GKI+P+R++ QR+L AI
Sbjct: 16 QQNPLFKRRKFCRFTAAGVDEIDYKDIDTLKDFITETGKIIPARLTGTKANYQRQLDTAI 75
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 76 KRARFLALLPYTD 88
>gi|304405909|ref|ZP_07387567.1| ribosomal protein S18 [Paenibacillus curdlanolyticus YK9]
gi|304345152|gb|EFM10988.1| ribosomal protein S18 [Paenibacillus curdlanolyticus YK9]
Length = 92
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ + RRK C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIK
Sbjct: 20 RKGRNKRRKVCFFTVNKIKHIDYKDTDLLRKFISERGKILPRRVTGTSAKYQRLLTVAIK 79
Query: 71 RARYLGLIAYVN 82
R+R + L+ Y
Sbjct: 80 RSRQIALLPYTT 91
>gi|114564510|ref|YP_752024.1| 30S ribosomal protein S18 [Shewanella frigidimarina NCIMB 400]
gi|122298732|sp|Q07XS9|RS18_SHEFN RecName: Full=30S ribosomal protein S18
gi|114335803|gb|ABI73185.1| SSU ribosomal protein S18P [Shewanella frigidimarina NCIMB 400]
Length = 75
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ S + QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTSEGVVEIDYKDIVTLKNYITESGKIVPSRITGTSARYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|260655513|ref|ZP_05861001.1| ribosomal protein S18 [Jonquetella anthropi E3_33 E1]
gi|260629961|gb|EEX48155.1| ribosomal protein S18 [Jonquetella anthropi E3_33 E1]
Length = 82
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD+ L +++S+RGKIVP R++ K QR+L AIKRAR++ L+
Sbjct: 18 KVCYYCADKLEHADYKDVDRLRKYVSERGKIVPRRVTGNCAKHQRQLTIAIKRARFMALL 77
Query: 79 AYV 81
Y
Sbjct: 78 PYT 80
>gi|319941486|ref|ZP_08015814.1| 30S ribosomal protein S18 [Sutterella wadsworthensis 3_1_45B]
gi|319805106|gb|EFW01936.1| 30S ribosomal protein S18 [Sutterella wadsworthensis 3_1_45B]
Length = 90
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ ++ RRK C + + +IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 16 QQNSLFKRRKFCRFTAEHVEQIDYKDVDTLRDFIQENGKIMPARLTGTQAHYQRQLDTAI 75
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 76 KRARFLALLPYTD 88
>gi|224824683|ref|ZP_03697790.1| ribosomal protein S18 [Lutiella nitroferrum 2002]
gi|224603176|gb|EEG09352.1| ribosomal protein S18 [Lutiella nitroferrum 2002]
Length = 75
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + R+K C + +G IDYK + LL F+++ GKI+PSRI+ + QR+L AI
Sbjct: 1 MARQLFKRKKFCRFTAEGIKEIDYKSVDLLKDFIAENGKIIPSRITGTKARYQRQLTTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L + Y +
Sbjct: 61 KRARFLAFLPYTD 73
>gi|291548589|emb|CBL24851.1| SSU ribosomal protein S18P [Ruminococcus torques L2-14]
Length = 88
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RGPARRRKKVCVFCGKENNEIDYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHISLMPYV 86
>gi|162149102|ref|YP_001603563.1| 30S ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl
5]
gi|209545155|ref|YP_002277384.1| 30S ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl
5]
gi|254812942|sp|A9H1M6|RS18_GLUDA RecName: Full=30S ribosomal protein S18
gi|161787679|emb|CAP57275.1| putative 30S ribosomal protein S18 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532832|gb|ACI52769.1| ribosomal protein S18 [Gluconacetobacter diazotrophicus PAl 5]
Length = 91
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR++ L+ Y+
Sbjct: 79 RARFMALLPYI 89
>gi|296116662|ref|ZP_06835272.1| 30S ribosomal protein S18 [Gluconacetobacter hansenii ATCC 23769]
gi|295976874|gb|EFG83642.1| 30S ribosomal protein S18 [Gluconacetobacter hansenii ATCC 23769]
Length = 91
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPQIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|222148135|ref|YP_002549092.1| 30S ribosomal protein S18 [Agrobacterium vitis S4]
gi|254765403|sp|B9JUU1|RS18_AGRVS RecName: Full=30S ribosomal protein S18
gi|221735123|gb|ACM36086.1| 30S ribosomal protein S18 [Agrobacterium vitis S4]
Length = 82
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAEV+ + +RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAEVSSS-TVRRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|254369338|ref|ZP_04985350.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122288|gb|EDO66428.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC022]
Length = 72
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYYD 68
>gi|114319745|ref|YP_741428.1| 30S ribosomal protein S18 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312361|sp|Q0AB49|RS18_ALHEH RecName: Full=30S ribosomal protein S18
gi|114226139|gb|ABI55938.1| SSU ribosomal protein S18P [Alkalilimnicola ehrlichii MLHE-1]
Length = 74
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ S + QR+LA+AIKRA
Sbjct: 3 RFFRRRKYCRFTAEGVKEIDYKDLNTLRNYVTETGKIVPSRITGTSARYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|16272489|ref|NP_438703.1| 30S ribosomal protein S18 [Haemophilus influenzae Rd KW20]
gi|32033888|ref|ZP_00134159.1| COG0238: Ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|33152179|ref|NP_873532.1| 30S ribosomal protein S18 [Haemophilus ducreyi 35000HP]
gi|68249142|ref|YP_248254.1| 30S ribosomal protein S18 [Haemophilus influenzae 86-028NP]
gi|145628926|ref|ZP_01784726.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.1-21]
gi|145630274|ref|ZP_01786055.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|145633503|ref|ZP_01789232.1| 30S ribosomal protein S18 [Haemophilus influenzae 3655]
gi|145635374|ref|ZP_01791076.1| 30S ribosomal protein S18 [Haemophilus influenzae PittAA]
gi|145637414|ref|ZP_01793073.1| 30S ribosomal protein S18 [Haemophilus influenzae PittHH]
gi|145638545|ref|ZP_01794154.1| 30S ribosomal protein S18 [Haemophilus influenzae PittII]
gi|145640518|ref|ZP_01796102.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|148825181|ref|YP_001289934.1| 30S ribosomal protein S18 [Haemophilus influenzae PittEE]
gi|148827736|ref|YP_001292489.1| 30S ribosomal protein S18 [Haemophilus influenzae PittGG]
gi|165976597|ref|YP_001652190.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|167855349|ref|ZP_02478116.1| 30S ribosomal protein S18 [Haemophilus parasuis 29755]
gi|190150497|ref|YP_001969022.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|219871260|ref|YP_002475635.1| 30S ribosomal protein S18 [Haemophilus parasuis SH0165]
gi|229844296|ref|ZP_04464436.1| 30S ribosomal protein S18 [Haemophilus influenzae 6P18H1]
gi|229846628|ref|ZP_04466736.1| 30S ribosomal protein S18 [Haemophilus influenzae 7P49H1]
gi|254361769|ref|ZP_04977904.1| ribosomal protein S18 [Mannheimia haemolytica PHL213]
gi|260580992|ref|ZP_05848815.1| ribosomal protein S18 [Haemophilus influenzae RdAW]
gi|260582751|ref|ZP_05850538.1| ribosomal protein S18 [Haemophilus influenzae NT127]
gi|261494029|ref|ZP_05990532.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496211|ref|ZP_05992617.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|303250080|ref|ZP_07336282.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303253253|ref|ZP_07339402.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246085|ref|ZP_07528167.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250425|ref|ZP_07532372.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252810|ref|ZP_07534700.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307257225|ref|ZP_07538996.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307259503|ref|ZP_07541228.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|319775534|ref|YP_004138022.1| 30S ribosomal protein S18 [Haemophilus influenzae F3047]
gi|319897938|ref|YP_004136135.1| 30S ribosomal protein s18 [Haemophilus influenzae F3031]
gi|322515404|ref|ZP_08068396.1| 50S ribosomal protein L21 [Actinobacillus ureae ATCC 25976]
gi|329122423|ref|ZP_08251010.1| 50S ribosomal protein L21 [Haemophilus aegyptius ATCC 11116]
gi|54039411|sp|P66458|RS18_HAEDU RecName: Full=30S ribosomal protein S18
gi|54042146|sp|P66457|RS18_HAEIN RecName: Full=30S ribosomal protein S18
gi|81336451|sp|Q4QN03|RS18_HAEI8 RecName: Full=30S ribosomal protein S18
gi|166220952|sp|A5U9V0|RS18_HAEIE RecName: Full=30S ribosomal protein S18
gi|166220953|sp|A5UH50|RS18_HAEIG RecName: Full=30S ribosomal protein S18
gi|229470504|sp|B3GY57|RS18_ACTP7 RecName: Full=30S ribosomal protein S18
gi|229470509|sp|B0BQB1|RS18_ACTPJ RecName: Full=30S ribosomal protein S18
gi|254812943|sp|B8F5T5|RS18_HAEPS RecName: Full=30S ribosomal protein S18
gi|1573530|gb|AAC22203.1| ribosomal protein S18 (rpS18) [Haemophilus influenzae Rd KW20]
gi|33148401|gb|AAP95921.1| 30S ribosomal protein S18 [Haemophilus ducreyi 35000HP]
gi|68057341|gb|AAX87594.1| 30S ribosomal protein S18 [Haemophilus influenzae 86-028NP]
gi|144979396|gb|EDJ89082.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.1-21]
gi|144984009|gb|EDJ91446.1| 30S ribosomal protein S18 [Haemophilus influenzae R3021]
gi|144985872|gb|EDJ92480.1| 30S ribosomal protein S18 [Haemophilus influenzae 3655]
gi|145267380|gb|EDK07382.1| 30S ribosomal protein S18 [Haemophilus influenzae PittAA]
gi|145269360|gb|EDK09304.1| 30S ribosomal protein S18 [Haemophilus influenzae PittHH]
gi|145272140|gb|EDK12048.1| 30S ribosomal protein S18 [Haemophilus influenzae PittII]
gi|145275104|gb|EDK14966.1| 30S ribosomal protein S18 [Haemophilus influenzae 22.4-21]
gi|148715341|gb|ABQ97551.1| 30S ribosomal protein S18 [Haemophilus influenzae PittEE]
gi|148718978|gb|ABR00106.1| 30S ribosomal protein S18 [Haemophilus influenzae PittGG]
gi|153093304|gb|EDN74300.1| ribosomal protein S18 [Mannheimia haemolytica PHL213]
gi|165876698|gb|ABY69746.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|167853497|gb|EDS24744.1| 30S ribosomal protein S18 [Haemophilus parasuis 29755]
gi|189915628|gb|ACE61880.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|219691464|gb|ACL32687.1| 30S ribosomal protein S18 [Haemophilus parasuis SH0165]
gi|229810721|gb|EEP46439.1| 30S ribosomal protein S18 [Haemophilus influenzae 7P49H1]
gi|229812545|gb|EEP48234.1| 30S ribosomal protein S18 [Haemophilus influenzae 6P18H1]
gi|260092351|gb|EEW76291.1| ribosomal protein S18 [Haemophilus influenzae RdAW]
gi|260094201|gb|EEW78102.1| ribosomal protein S18 [Haemophilus influenzae NT127]
gi|261308163|gb|EEY09460.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310195|gb|EEY11395.1| 30S ribosomal protein S18 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|301169260|emb|CBW28857.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae 10810]
gi|302647935|gb|EFL78142.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651143|gb|EFL81297.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853020|gb|EFM85243.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857554|gb|EFM89663.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859709|gb|EFM91732.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306864267|gb|EFM96179.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306866439|gb|EFM98302.1| 30S ribosomal protein S18 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|309750049|gb|ADO80033.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae R2866]
gi|309972304|gb|ADO95505.1| 30S ribosomal subunit protein S18 [Haemophilus influenzae R2846]
gi|317433444|emb|CBY81827.1| 30S ribosomal protein S18 [Haemophilus influenzae F3031]
gi|317450125|emb|CBY86339.1| 30S ribosomal protein S18 [Haemophilus influenzae F3047]
gi|322118559|gb|EFX90791.1| 50S ribosomal protein L21 [Actinobacillus ureae ATCC 25976]
gi|327473705|gb|EGF19124.1| 50S ribosomal protein L21 [Haemophilus aegyptius ATCC 11116]
Length = 75
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|266620038|ref|ZP_06112973.1| ribosomal protein S18 [Clostridium hathewayi DSM 13479]
gi|288868399|gb|EFD00698.1| ribosomal protein S18 [Clostridium hathewayi DSM 13479]
Length = 88
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGEKNGTIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|75763190|ref|ZP_00742955.1| SSU ribosomal protein S18P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489322|gb|EAO52773.1| SSU ribosomal protein S18P [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 64
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G RIDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR + L+ Y
Sbjct: 2 CFFTANGITRIDYKDVDLLKRFVSERGKILPRRVTGTSAKYQRKLTVAIKRARQMALLPY 61
Query: 81 VN 82
V
Sbjct: 62 VG 63
>gi|295108217|emb|CBL22170.1| SSU ribosomal protein S18P [Ruminococcus obeum A2-162]
Length = 87
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
E +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GERPDSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L A+KRAR+L L+ YV
Sbjct: 66 QRALTVAVKRARHLSLMPYV 85
>gi|89256364|ref|YP_513726.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica LVS]
gi|167010709|ref|ZP_02275640.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FSC200]
gi|169656607|ref|YP_001428514.2| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367700|ref|ZP_04983721.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica 257]
gi|290954057|ref|ZP_06558678.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312550|ref|ZP_06803310.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica URFT1]
gi|122999744|sp|Q2A3H6|RS18_FRATH RecName: Full=30S ribosomal protein S18
gi|205562308|sp|A7NC55|RS18_FRATF RecName: Full=30S ribosomal protein S18
gi|89144195|emb|CAJ79464.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica LVS]
gi|134253511|gb|EBA52605.1| 30S ribosomal protein S18 [Francisella tularensis subsp.
holarctica 257]
gi|164551675|gb|ABU61558.2| ribosomal protein S18 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 72
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L
Sbjct: 3 RRKVCRFTIEGVKEIDYKDVNKLKAYINETGKIVPSRVTGTSAKYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYCD 68
>gi|121997453|ref|YP_001002240.1| 30S ribosomal protein S18 [Halorhodospira halophila SL1]
gi|166220954|sp|A1WUS6|RS18_HALHL RecName: Full=30S ribosomal protein S18
gi|121588858|gb|ABM61438.1| SSU ribosomal protein S18P [Halorhodospira halophila SL1]
Length = 74
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L +++ GKIVPSRI+ S + QR+LA+AIKRA
Sbjct: 3 RFFRRRKYCKFTAEGVKEIDYKDLNTLKNYITDTGKIVPSRITGTSARYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|293400277|ref|ZP_06644423.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306677|gb|EFE47920.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 76
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIEYIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV+
Sbjct: 63 KRARQMALLPYVS 75
>gi|229917472|ref|YP_002886118.1| ribosomal protein S18 [Exiguobacterium sp. AT1b]
gi|229468901|gb|ACQ70673.1| ribosomal protein S18 [Exiguobacterium sp. AT1b]
Length = 76
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKR+R + L+
Sbjct: 12 KVCFFTSNNITHIDYKDVELLKRFVSERGKILPRRVTGTSAKYQRPLTVAIKRSRQMALL 71
Query: 79 AYV 81
YV
Sbjct: 72 PYV 74
>gi|288958519|ref|YP_003448860.1| small subunit ribosomal protein S18 [Azospirillum sp. B510]
gi|288910827|dbj|BAI72316.1| small subunit ribosomal protein S18 [Azospirillum sp. B510]
Length = 89
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A T RR RRK+CP SG AP IDYKD++LL+RF+S+RGKIVPSRI++VS KKQRE
Sbjct: 11 ARTGGARRPFFRRRKTCPFSGANAPAIDYKDVKLLSRFISERGKIVPSRITAVSTKKQRE 70
Query: 65 LAKAIKRARYLGLIAYV 81
LA+AIKRAR+L L+ YV
Sbjct: 71 LARAIKRARFLALLPYV 87
>gi|117618475|ref|YP_855253.1| 30S ribosomal protein S18 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330831137|ref|YP_004394089.1| 30S ribosomal protein S18 [Aeromonas veronii B565]
gi|166220920|sp|A0KG68|RS18_AERHH RecName: Full=30S ribosomal protein S18
gi|117559882|gb|ABK36830.1| ribosomal protein S18 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|328806273|gb|AEB51472.1| 30S ribosomal protein S18 [Aeromonas veronii B565]
Length = 76
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVTEIDYKDIVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|145297777|ref|YP_001140618.1| 30S ribosomal protein S18 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166220921|sp|A4SIZ8|RS18_AERS4 RecName: Full=30S ribosomal protein S18
gi|142850549|gb|ABO88870.1| ribosomal protein S18 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 76
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVTEIDYKDIVTLKNYVTESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLALLPYTDL 73
>gi|319408306|emb|CBI81959.1| 30S ribosomal protein S18 [Bartonella schoenbuchensis R1]
Length = 82
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M E+ TP +RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MIEINQTP-VRRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|313205958|ref|YP_004045135.1| SSU ribosomal protein s18p [Riemerella anatipestifer DSM 15868]
gi|312445274|gb|ADQ81629.1| SSU ribosomal protein S18P [Riemerella anatipestifer DSM 15868]
gi|315022271|gb|EFT35299.1| SSU ribosomal protein S18p [Riemerella anatipestifer RA-YM]
gi|325336603|gb|ADZ12877.1| Ribosomal protein S18 [Riemerella anatipestifer RA-GD]
Length = 100
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+EV L N +K C G +DYKD L +F++++GKI+P R + S K
Sbjct: 16 SEVKFLTPLDINTKSEKKYCRFKKYGIKYVDYKDADFLLQFVNEQGKILPRRYTGTSLKY 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR+++ AIKRAR+L L+ YV
Sbjct: 76 QRKVSAAIKRARHLALMPYV 95
>gi|59798883|sp|Q82XQ8|RS18_NITEU RecName: Full=30S ribosomal protein S18
Length = 76
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R + R+K C + +G IDYKDI LL F+S+ G+I+P+RI+ QR+L A
Sbjct: 1 MANRPLFKRKKFCRFTAEGIKHIDYKDIDLLKDFVSENGRIIPARITGTRAYYQRQLNLA 60
Query: 69 IKRARYLGLIAYVN 82
I+RAR+L L+ Y +
Sbjct: 61 IERARFLALLPYTD 74
>gi|52424526|ref|YP_087663.1| 30S ribosomal protein S18 [Mannheimia succiniciproducens MBEL55E]
gi|113461579|ref|YP_719648.1| 30S ribosomal protein S18 [Haemophilus somnus 129PT]
gi|152978437|ref|YP_001344066.1| 30S ribosomal protein S18 [Actinobacillus succinogenes 130Z]
gi|170718759|ref|YP_001783944.1| 30S ribosomal protein S18 [Haemophilus somnus 2336]
gi|332289560|ref|YP_004420412.1| 30S ribosomal protein S18 [Gallibacterium anatis UMN179]
gi|59798655|sp|Q65VD2|RS18_MANSM RecName: Full=30S ribosomal protein S18
gi|123132188|sp|Q0I4E7|RS18_HAES1 RecName: Full=30S ribosomal protein S18
gi|171704224|sp|A6VMD4|RS18_ACTSZ RecName: Full=30S ribosomal protein S18
gi|189029679|sp|B0US45|RS18_HAES2 RecName: Full=30S ribosomal protein S18
gi|52306578|gb|AAU37078.1| RpsR protein [Mannheimia succiniciproducens MBEL55E]
gi|112823622|gb|ABI25711.1| SSU ribosomal protein S18P [Haemophilus somnus 129PT]
gi|150840160|gb|ABR74131.1| ribosomal protein S18 [Actinobacillus succinogenes 130Z]
gi|168826888|gb|ACA32259.1| ribosomal protein S18 [Haemophilus somnus 2336]
gi|330432456|gb|AEC17515.1| 30S ribosomal protein S18 [Gallibacterium anatis UMN179]
Length = 75
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|302384674|ref|YP_003820496.1| ribosomal protein S18 [Clostridium saccharolyticum WM1]
gi|302195302|gb|ADL02873.1| ribosomal protein S18 [Clostridium saccharolyticum WM1]
Length = 88
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G+ IDYKD+ L R++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGEKNGVIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|257453409|ref|ZP_05618704.1| ribosomal protein S18 [Enhydrobacter aerosaccus SK60]
gi|257449161|gb|EEV24109.1| ribosomal protein S18 [Enhydrobacter aerosaccus SK60]
Length = 75
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI +L +++++ GKIVPSRI+ S+K QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAEGITHIDYKDIEILKQYVTESGKIVPSRITGTSNKYQRQLAVAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LI Y +
Sbjct: 63 RYLALIPYTD 72
>gi|57234187|ref|YP_181760.1| 30S ribosomal protein S18 [Dehalococcoides ethenogenes 195]
gi|123773606|sp|Q3Z7N9|RS18_DEHE1 RecName: Full=30S ribosomal protein S18
gi|57224635|gb|AAW39692.1| ribosomal protein S18 [Dehalococcoides ethenogenes 195]
Length = 147
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P R + +RK C + RIDYKD L R++S RGKI P R + + QR L
Sbjct: 10 PARGGRGRYTPKRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRAL 69
Query: 66 AKAIKRARYLGLIAYVN 82
A AIKRAR++ L+ +V+
Sbjct: 70 ANAIKRARFIALMPFVS 86
>gi|21231018|ref|NP_636935.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|58582038|ref|YP_201054.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|66768977|ref|YP_243739.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|84623950|ref|YP_451322.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166711573|ref|ZP_02242780.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|188576349|ref|YP_001913278.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188992091|ref|YP_001904101.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. B100]
gi|289663137|ref|ZP_06484718.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669573|ref|ZP_06490648.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. musacearum
NCPPB4381]
gi|325915473|ref|ZP_08177787.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325917961|ref|ZP_08180130.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325922527|ref|ZP_08184288.1| SSU ribosomal protein S18P [Xanthomonas gardneri ATCC 19865]
gi|23822129|sp|Q8PAC1|RS18_XANCP RecName: Full=30S ribosomal protein S18
gi|75508188|sp|Q5H052|RS18_XANOR RecName: Full=30S ribosomal protein S18
gi|81305059|sp|Q4UTA4|RS18_XANC8 RecName: Full=30S ribosomal protein S18
gi|123739106|sp|Q2P329|RS18_XANOM RecName: Full=30S ribosomal protein S18
gi|229560081|sp|B0RUY8|RS18_XANCB RecName: Full=30S ribosomal protein S18
gi|229560082|sp|B2SIV1|RS18_XANOP RecName: Full=30S ribosomal protein S18
gi|21112642|gb|AAM40859.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|58426632|gb|AAW75669.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|66574309|gb|AAY49719.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|84367890|dbj|BAE69048.1| 30S ribosomal protein S18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|167733851|emb|CAP52057.1| 30S ribosomal protein S18 [Xanthomonas campestris pv. campestris]
gi|188520801|gb|ACD58746.1| ribosomal protein S18 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325535818|gb|EGD07645.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325538355|gb|EGD10037.1| SSU ribosomal protein S18P [Xanthomonas vesicatoria ATCC 35937]
gi|325546992|gb|EGD18085.1| SSU ribosomal protein S18P [Xanthomonas gardneri ATCC 19865]
Length = 76
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ K QR+LA A+KR+
Sbjct: 3 KFFRRRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSKYQRQLATAVKRS 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|330993922|ref|ZP_08317852.1| 30S ribosomal protein S18 [Gluconacetobacter sp. SXCC-1]
gi|329758868|gb|EGG75382.1| 30S ribosomal protein S18 [Gluconacetobacter sp. SXCC-1]
Length = 91
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|325579200|ref|ZP_08149156.1| 50S ribosomal protein L21 [Haemophilus parainfluenzae ATCC 33392]
gi|301155579|emb|CBW15047.1| 30S ribosomal subunit protein S18 [Haemophilus parainfluenzae
T3T1]
gi|325159435|gb|EGC71569.1| 50S ribosomal protein L21 [Haemophilus parainfluenzae ATCC 33392]
Length = 76
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYSD 72
>gi|293375552|ref|ZP_06621826.1| ribosomal protein S18 [Turicibacter sanguinis PC909]
gi|325845115|ref|ZP_08168426.1| ribosomal protein S18 [Turicibacter sp. HGF1]
gi|292645769|gb|EFF63805.1| ribosomal protein S18 [Turicibacter sanguinis PC909]
gi|325488857|gb|EGC91255.1| ribosomal protein S18 [Turicibacter sp. HGF1]
Length = 77
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C + +IDYKD+ LL RF+S RGKI+P R++ S K QREL AIKRAR++ L+
Sbjct: 13 KVCYFTTNKITKIDYKDVDLLKRFVSDRGKILPRRVTGTSAKYQRELTVAIKRARHMALL 72
Query: 79 AY 80
+
Sbjct: 73 PF 74
>gi|157694460|ref|YP_001488922.1| 30S ribosomal protein S18 [Bacillus pumilus SAFR-032]
gi|167011187|sp|A8FJE5|RS18_BACP2 RecName: Full=30S ribosomal protein S18
gi|157683218|gb|ABV64362.1| ribosomal protein S18 [Bacillus pumilus SAFR-032]
Length = 79
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK++R + L+
Sbjct: 15 VCFFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTSAKYQRKLTLAIKKSRQMALLP 74
Query: 80 YVN 82
YV
Sbjct: 75 YVT 77
>gi|283798280|ref|ZP_06347433.1| ribosomal protein S18 [Clostridium sp. M62/1]
gi|291074059|gb|EFE11423.1| ribosomal protein S18 [Clostridium sp. M62/1]
gi|295090607|emb|CBK76714.1| SSU ribosomal protein S18P [Clostridium cf. saccharolyticum K10]
gi|295115695|emb|CBL36542.1| SSU ribosomal protein S18P [butyrate-producing bacterium SM4/1]
Length = 88
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G+ IDYKD L R++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGEKNGTIDYKDTNKLKRYVSERGKILPRRITGNCAKHQRALTVAIKRARHIALMP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|251793280|ref|YP_003008008.1| 30S ribosomal protein S18 [Aggregatibacter aphrophilus NJ8700]
gi|261867098|ref|YP_003255020.1| 30S ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|293390733|ref|ZP_06635067.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|315633585|ref|ZP_07888875.1| 50S ribosomal protein L21 [Aggregatibacter segnis ATCC 33393]
gi|247534675|gb|ACS97921.1| ribosomal protein S18 [Aggregatibacter aphrophilus NJ8700]
gi|261412430|gb|ACX81801.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|290951267|gb|EFE01386.1| ribosomal protein S18 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|315477627|gb|EFU68369.1| 50S ribosomal protein L21 [Aggregatibacter segnis ATCC 33393]
Length = 76
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++S+ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYSD 72
>gi|34499093|ref|NP_903308.1| 30S ribosomal protein S18 [Chromobacterium violaceum ATCC 12472]
gi|59798832|sp|Q7NRY9|RS18_CHRVO RecName: Full=30S ribosomal protein S18
gi|34104944|gb|AAQ61300.1| 30S ribosomal protein S18 [Chromobacterium violaceum ATCC 12472]
Length = 75
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + R+K C + +G IDYK + LL F+++ GKI+P+RI+ + QR+L AI
Sbjct: 1 MARQLFKRKKFCRFTAEGIKEIDYKSVDLLKDFIAENGKIIPARITGTKARYQRQLTTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L + Y +
Sbjct: 61 KRARFLAFLPYTD 73
>gi|237745856|ref|ZP_04576336.1| 30S ribosomal protein S18 [Oxalobacter formigenes HOxBLS]
gi|229377207|gb|EEO27298.1| 30S ribosomal protein S18 [Oxalobacter formigenes HOxBLS]
Length = 94
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + R+K C + +IDYKDI L F+ + KI+P+R++ QR+L AI
Sbjct: 18 QQNPLFKRKKFCRFTVANVEQIDYKDIDTLKDFIQENCKIMPARLTGTKAHYQRQLDTAI 77
Query: 70 KRARYLGLIAYVNL 83
KRAR+L L+ Y +L
Sbjct: 78 KRARFLALLPYTSL 91
>gi|319405479|emb|CBI79098.1| 30S ribosomal protein S18 [Bartonella sp. AR 15-3]
Length = 82
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ TP RR HRRK+CP S AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDIHQTP-TRRPFHHRRKTCPFSSTNAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELATAIKRARFLGLLPYV 80
>gi|319787275|ref|YP_004146750.1| ribosomal protein S18 [Pseudoxanthomonas suwonensis 11-1]
gi|317465787|gb|ADV27519.1| ribosomal protein S18 [Pseudoxanthomonas suwonensis 11-1]
Length = 76
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ GKIVPSR++ + QR+L+ AIKRA
Sbjct: 3 KFFRRRKFCKFTAEGVKEIDYKDLNTLRQYLTENGKIVPSRVTGTKSRYQRQLSTAIKRA 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|328956357|ref|YP_004373690.1| SSU ribosomal protein S18P [Coriobacterium glomerans PW2]
gi|328456681|gb|AEB07875.1| SSU ribosomal protein S18P [Coriobacterium glomerans PW2]
Length = 88
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C + IDYKDI+LL ++++ RGKI P R++ + Q ++A AIKRAR
Sbjct: 8 RQPRRKYCQFCKENTEHIDYKDIQLLRKYMTDRGKIKPRRVTGTCTQHQHDIANAIKRAR 67
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 68 EMALLPYT 75
>gi|189485365|ref|YP_001956306.1| 30S ribosomal protein S18 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|205618780|sp|B1H013|RS18_UNCTG RecName: Full=30S ribosomal protein S18
gi|170287324|dbj|BAG13845.1| 30S ribosomal protein S18 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 100
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RRN R+K C IDYK++ LL+ F++++GKI+ R++ K QREL
Sbjct: 24 PAGKFRRNGPIRKKVCRFCADKVE-IDYKNLSLLHTFVTEKGKILSGRMTGTCAKHQREL 82
Query: 66 AKAIKRARYLGLIAYV 81
AIKRAR + L+ +
Sbjct: 83 DTAIKRARMIALLPFT 98
>gi|331089019|ref|ZP_08337926.1| hypothetical protein HMPREF1025_01509 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406471|gb|EGG85984.1| hypothetical protein HMPREF1025_01509 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 88
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C GK I+YKD+ L +++S+RGKI+P RI+ K QR L AIK
Sbjct: 16 RGPARRRKKVCVFCGKENNEINYKDVAKLKKYVSERGKILPRRITGNCAKHQRALTVAIK 75
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 76 RARHIALMPYV 86
>gi|159184609|ref|NP_529002.1| 30S ribosomal protein S18 [Agrobacterium tumefaciens str. C58]
gi|325292469|ref|YP_004278333.1| 30S ribosomal protein S18 [Agrobacterium sp. H13-3]
gi|23822149|sp|Q8UGE8|RS18_AGRT5 RecName: Full=30S ribosomal protein S18
gi|17739485|gb|AAL42103.1| 30S ribosomal protein S18 [Agrobacterium tumefaciens str. C58]
gi|325060322|gb|ADY64013.1| 30S ribosomal protein S18 [Agrobacterium sp. H13-3]
Length = 82
Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA+ + + RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MADTSSS-QARRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELAQAIKRARFLGLLPYV 80
>gi|301062683|ref|ZP_07203301.1| ribosomal protein S18 [delta proteobacterium NaphS2]
gi|300443206|gb|EFK07353.1| ribosomal protein S18 [delta proteobacterium NaphS2]
Length = 93
Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R HRRK C + IDYKD+++L F ++RGKI P RIS K QR L AIKR
Sbjct: 19 RKTYHRRKVCKFCADSSLSIDYKDVKILRYFTTERGKITPRRISGNCAKHQRMLTVAIKR 78
Query: 72 ARYLGLIAYVN 82
AR + L+ Y
Sbjct: 79 ARNIALLPYTT 89
>gi|300777789|ref|ZP_07087647.1| 30S ribosomal protein S18 [Chryseobacterium gleum ATCC 35910]
gi|300503299|gb|EFK34439.1| 30S ribosomal protein S18 [Chryseobacterium gleum ATCC 35910]
Length = 100
Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+EV L N +K C G +DYKD L +F++++GKI+P R + S K
Sbjct: 16 SEVKFLTPLDINTKSEKKYCRFKKYGIKHVDYKDADFLLQFVNEQGKILPRRYTGTSLKY 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR+++ AIKRAR+L L+ YV
Sbjct: 76 QRKVSAAIKRARHLALLPYV 95
>gi|223982851|ref|ZP_03633072.1| hypothetical protein HOLDEFILI_00346 [Holdemania filiformis DSM
12042]
gi|223965173|gb|EEF69464.1| hypothetical protein HOLDEFILI_00346 [Holdemania filiformis DSM
12042]
Length = 76
Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNNITSIDYKDVELLKRFVSANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YVN
Sbjct: 63 KRARQMALLPYVN 75
>gi|295398127|ref|ZP_06808176.1| 30S ribosomal protein S18 [Aerococcus viridans ATCC 11563]
gi|294973646|gb|EFG49424.1| 30S ribosomal protein S18 [Aerococcus viridans ATCC 11563]
Length = 78
Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYKD LL R++S++GKI+P R++ K QR L IKRAR + LI
Sbjct: 14 VCFFCANHIDHVDYKDTDLLKRYISEKGKILPRRVTGTCAKHQRTLTAGIKRARIMALIP 73
Query: 80 YVN 82
+
Sbjct: 74 FTT 76
>gi|114328879|ref|YP_746036.1| 30S ribosomal protein S18 [Granulibacter bethesdensis CGDNIH1]
gi|122326172|sp|Q0BPY9|RS18_GRABC RecName: Full=30S ribosomal protein S18
gi|114317053|gb|ABI63113.1| SSU ribosomal protein S18P [Granulibacter bethesdensis CGDNIH1]
Length = 91
Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP SG AP+IDYKD+RLL+RFLS+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 19 RRPFYRRRKSCPFSGPNAPKIDYKDVRLLSRFLSERGKIVPSRITAVSAKKQRELAQAIK 78
Query: 71 RARYLGLIAYV 81
RAR+L L+ Y+
Sbjct: 79 RARFLALLPYI 89
>gi|90416567|ref|ZP_01224498.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2207]
gi|90331766|gb|EAS46994.1| 30S ribosomal protein S18 [marine gamma proteobacterium HTCC2207]
Length = 75
Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C S +GAP IDYKD+ L ++S+ GKIVPSRI+ + QR+LA+AIKRA
Sbjct: 3 KFVRRRKFCRFSAEGAPEIDYKDLDTLKGYVSESGKIVPSRITGTKARYQRQLAEAIKRA 62
Query: 73 RYLGLIAYVN 82
RY+ L+ Y +
Sbjct: 63 RYIALLPYTD 72
>gi|302877153|ref|YP_003845786.1| 30S ribosomal protein S18 [Clostridium cellulovorans 743B]
gi|307687852|ref|ZP_07630298.1| 30S ribosomal protein S18 [Clostridium cellulovorans 743B]
gi|302580010|gb|ADL54022.1| ribosomal protein S18 [Clostridium cellulovorans 743B]
Length = 85
Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 1 MAEVAPTPLLR--RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
M+E + R R+K C + IDYKD+ L +++++RGKI+P RIS
Sbjct: 1 MSENNKKEFKKNIRGRKSRKKVCAFCSEKVEAIDYKDVNRLRKYVTERGKILPRRISGTC 60
Query: 59 HKKQRELAKAIKRARYLGLIAYVN 82
K QREL +IKRAR + L+ +
Sbjct: 61 AKHQRELTGSIKRARNIALLPFTT 84
>gi|187932713|ref|YP_001887719.1| 30S ribosomal protein S18 [Clostridium botulinum B str. Eklund
17B]
gi|188587867|ref|YP_001922702.1| 30S ribosomal protein S18 [Clostridium botulinum E3 str. Alaska
E43]
gi|251778070|ref|ZP_04820990.1| 30S ribosomal protein S18 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|187720866|gb|ACD22087.1| 30S ribosomal protein S18 [Clostridium botulinum B str. Eklund
17B]
gi|188498148|gb|ACD51284.1| 30S ribosomal protein S18 [Clostridium botulinum E3 str. Alaska
E43]
gi|243082385|gb|EES48275.1| 30S ribosomal protein S18 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 83
Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+ R +RK C A IDYKDI L +++++RGKI+P RIS K
Sbjct: 1 MSREDNRRSGGRARRSKRKVCAFCVDKADSIDYKDINKLRKYVTERGKILPRRISGTCAK 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR + L+ +
Sbjct: 61 HQRQLTDAIKRARNIALLPFTT 82
>gi|15677187|ref|NP_274340.1| 30S ribosomal protein S18 [Neisseria meningitidis MC58]
gi|59801014|ref|YP_207726.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA 1090]
gi|121635032|ref|YP_975277.1| 30S ribosomal protein S18 [Neisseria meningitidis FAM18]
gi|161870196|ref|YP_001599366.1| 30S ribosomal protein S18 [Neisseria meningitidis 053442]
gi|194098898|ref|YP_002001963.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae NCCP11945]
gi|218768341|ref|YP_002342853.1| 30S ribosomal protein S18 [Neisseria meningitidis Z2491]
gi|239999181|ref|ZP_04719105.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|240013911|ref|ZP_04720824.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI18]
gi|240016353|ref|ZP_04722893.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA6140]
gi|240080472|ref|ZP_04725015.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|240113160|ref|ZP_04727650.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|240115916|ref|ZP_04729978.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|240118214|ref|ZP_04732276.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|240121480|ref|ZP_04734442.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID24-1]
gi|240123762|ref|ZP_04736718.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|240125953|ref|ZP_04738839.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|240128465|ref|ZP_04741126.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|254493952|ref|ZP_05107123.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 1291]
gi|254805120|ref|YP_003083341.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha14]
gi|260440269|ref|ZP_05794085.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|261379073|ref|ZP_05983646.1| ribosomal protein S18 [Neisseria cinerea ATCC 14685]
gi|268595011|ref|ZP_06129178.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|268596609|ref|ZP_06130776.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|268599239|ref|ZP_06133406.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|268601586|ref|ZP_06135753.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|268603925|ref|ZP_06138092.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|268682388|ref|ZP_06149250.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|268684546|ref|ZP_06151408.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|268686856|ref|ZP_06153718.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|291043563|ref|ZP_06569279.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|293398877|ref|ZP_06643042.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae F62]
gi|296314492|ref|ZP_06864433.1| ribosomal protein S18 [Neisseria polysaccharea ATCC 43768]
gi|304387368|ref|ZP_07369560.1| 30S ribosomal protein S18 [Neisseria meningitidis ATCC 13091]
gi|313668458|ref|YP_004048742.1| 30S ribosomal protein S18 [Neisseria lactamica ST-640]
gi|60397121|sp|P0A0X6|RS18_NEIMA RecName: Full=30S ribosomal protein S18
gi|60397126|sp|P0A0X7|RS18_NEIMB RecName: Full=30S ribosomal protein S18
gi|60397129|sp|P0A0X8|RS18_NEIGO RecName: Full=30S ribosomal protein S18
gi|75507399|sp|Q5F923|RS18_NEIG1 RecName: Full=30S ribosomal protein S18
gi|166220963|sp|A1KUE8|RS18_NEIMF RecName: Full=30S ribosomal protein S18
gi|189029682|sp|A9LZQ1|RS18_NEIM0 RecName: Full=30S ribosomal protein S18
gi|229560046|sp|B4RMH8|RS18_NEIG2 RecName: Full=30S ribosomal protein S18
gi|2196759|gb|AAB61230.1| ribosomal protein S18 [Neisseria gonorrhoeae]
gi|7226563|gb|AAF41696.1| 30S ribosomal protein S18 [Neisseria meningitidis MC58]
gi|59717909|gb|AAW89314.1| putative 30S ribosomal protein S18 [Neisseria gonorrhoeae FA
1090]
gi|120866738|emb|CAM10491.1| 30S ribosomal protein S18 [Neisseria meningitidis FAM18]
gi|121052349|emb|CAM08681.1| 30S ribosomal protein S18 [Neisseria meningitidis Z2491]
gi|161595749|gb|ABX73409.1| 30S ribosomal protein S18 [Neisseria meningitidis 053442]
gi|193934188|gb|ACF30012.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae NCCP11945]
gi|226512992|gb|EEH62337.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 1291]
gi|254668662|emb|CBA06343.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha14]
gi|254671749|emb|CBA09574.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha153]
gi|254673115|emb|CBA07862.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha275]
gi|261392399|emb|CAX49941.1| 30S ribosomal protein S18 [Neisseria meningitidis 8013]
gi|268548400|gb|EEZ43818.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae 35/02]
gi|268550397|gb|EEZ45416.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae FA19]
gi|268583370|gb|EEZ48046.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae MS11]
gi|268585717|gb|EEZ50393.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID18]
gi|268588056|gb|EEZ52732.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID1]
gi|268622672|gb|EEZ55072.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae PID332]
gi|268624830|gb|EEZ57230.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-92-679]
gi|268627140|gb|EEZ59540.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae SK-93-1035]
gi|269144452|gb|EEZ70870.1| ribosomal protein S18 [Neisseria cinerea ATCC 14685]
gi|291012026|gb|EFE04015.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae DGI2]
gi|291610291|gb|EFF39401.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae F62]
gi|296838794|gb|EFH22732.1| ribosomal protein S18 [Neisseria polysaccharea ATCC 43768]
gi|304338619|gb|EFM04737.1| 30S ribosomal protein S18 [Neisseria meningitidis ATCC 13091]
gi|308389439|gb|ADO31759.1| 30S ribosomal protein S18 [Neisseria meningitidis alpha710]
gi|309379250|emb|CBX22207.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005920|emb|CBN87377.1| 30S ribosomal protein S18 [Neisseria lactamica 020-06]
gi|316984123|gb|EFV63101.1| ribosomal protein S18 [Neisseria meningitidis H44/76]
gi|317164469|gb|ADV08010.1| 30S ribosomal protein S18 [Neisseria gonorrhoeae TCDC-NG08107]
gi|319410587|emb|CBY90956.1| 30S ribosomal protein S18 [Neisseria meningitidis WUE 2594]
gi|325128382|gb|EGC51265.1| ribosomal protein S18 [Neisseria meningitidis N1568]
gi|325130390|gb|EGC53155.1| ribosomal protein S18 [Neisseria meningitidis OX99.30304]
gi|325132479|gb|EGC55172.1| ribosomal protein S18 [Neisseria meningitidis M6190]
gi|325134439|gb|EGC57084.1| ribosomal protein S18 [Neisseria meningitidis M13399]
gi|325136176|gb|EGC58784.1| ribosomal protein S18 [Neisseria meningitidis M0579]
gi|325138253|gb|EGC60822.1| ribosomal protein S18 [Neisseria meningitidis ES14902]
gi|325140455|gb|EGC62976.1| ribosomal protein S18 [Neisseria meningitidis CU385]
gi|325142508|gb|EGC64909.1| ribosomal protein S18 [Neisseria meningitidis 961-5945]
gi|325144539|gb|EGC66838.1| ribosomal protein S18 [Neisseria meningitidis M01-240013]
gi|325198472|gb|ADY93928.1| ribosomal protein S18 [Neisseria meningitidis G2136]
gi|325200054|gb|ADY95509.1| ribosomal protein S18 [Neisseria meningitidis H44/76]
gi|325201969|gb|ADY97423.1| ribosomal protein S18 [Neisseria meningitidis M01-240149]
gi|325204320|gb|ADY99773.1| ribosomal protein S18 [Neisseria meningitidis M01-240355]
gi|325205907|gb|ADZ01360.1| ribosomal protein S18 [Neisseria meningitidis M04-240196]
gi|325208280|gb|ADZ03732.1| ribosomal protein S18 [Neisseria meningitidis NZ-05/33]
Length = 76
Score = 116 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +DYK + LL F+S+ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPARITGTKAFYQRQLAVAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|218291071|ref|ZP_03495094.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius LAA1]
gi|218238956|gb|EED06163.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius LAA1]
Length = 136
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C DYKD+ L++FL++RGKI+P RI+ + QR++ AIKRAR + L+
Sbjct: 13 VCQYCVDKIDYADYKDVARLSKFLTERGKILPRRITGNCARHQRQVTVAIKRARQVALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTH 75
>gi|269216494|ref|ZP_06160348.1| ribosomal protein S18 [Slackia exigua ATCC 700122]
gi|269130023|gb|EEZ61105.1| ribosomal protein S18 [Slackia exigua ATCC 700122]
Length = 86
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAE P RRK C G IDYKD +L +F++ RGKI P R++ +
Sbjct: 1 MAEYNKQP--------RRKFCQFCKDGTDYIDYKDTAMLRKFVTDRGKIKPRRVTGACVQ 52
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR++A AIK AR +GL+ YV
Sbjct: 53 HQRDIATAIKNAREMGLMPYV 73
>gi|51246448|ref|YP_066332.1| 30S ribosomal protein S18 [Desulfotalea psychrophila LSv54]
gi|59798684|sp|Q6AK01|RS18_DESPS RecName: Full=30S ribosomal protein S18
gi|50877485|emb|CAG37325.1| probable 30S ribosomal protein S18 [Desulfotalea psychrophila
LSv54]
Length = 81
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P ++ + R+K C IDYKD+++L F+S+RGKI+P RI QR+L
Sbjct: 2 APRPQKKLFTRKKVCRFCADKELVIDYKDVKVLRNFVSERGKIIPRRIVGTCASHQRQLC 61
Query: 67 KAIKRARYLGLIAY 80
+A+KRAR + L+ Y
Sbjct: 62 EAVKRARQIALLPY 75
>gi|226941616|ref|YP_002796690.1| 30S ribosomal protein S18 [Laribacter hongkongensis HLHK9]
gi|254812944|sp|C1DCR2|RS18_LARHH RecName: Full=30S ribosomal protein S18
gi|226716543|gb|ACO75681.1| RpsR [Laribacter hongkongensis HLHK9]
Length = 75
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RRK C + +G +DYK + LL F+++ GKI+P+RI+ + QR+L+ AI
Sbjct: 1 MARQLFKRRKFCRFTAEGIKEVDYKAVDLLKDFIAENGKIIPARITGTKARYQRQLSTAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALMPYTD 73
>gi|319898717|ref|YP_004158810.1| 30S ribosomal protein S18 [Bartonella clarridgeiae 73]
gi|319402681|emb|CBI76227.1| 30S ribosomal protein S18 [Bartonella clarridgeiae 73]
Length = 82
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T +RR HRRK+CP SG AP+IDYKD +LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDINQTS-VRRPFHHRRKTCPFSGANAPKIDYKDTKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|289449911|ref|YP_003475641.1| 30S ribosomal protein S18 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184458|gb|ADC90883.1| ribosomal protein S18 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 90
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L +F+S+RGKI+P R+S K QREL AIKRAR+L L+
Sbjct: 25 KVCNFCADHIETIDYKDVVRLRKFVSERGKILPKRMSGTCAKHQRELTIAIKRARHLALL 84
Query: 79 AYVN 82
++
Sbjct: 85 PFIG 88
>gi|315122245|ref|YP_004062734.1| 30S ribosomal protein S18 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495647|gb|ADR52246.1| 30S ribosomal protein S18 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 84
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/81 (90%), Positives = 76/81 (93%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+P PLLRRN+SHRRKSCP SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS KKQ
Sbjct: 4 SSSPAPLLRRNMSHRRKSCPFSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSQKKQ 63
Query: 63 RELAKAIKRARYLGLIAYVNL 83
RELAKAIKRARYLGLIAYVN+
Sbjct: 64 RELAKAIKRARYLGLIAYVNI 84
>gi|238917873|ref|YP_002931390.1| small subunit ribosomal protein S18 [Eubacterium eligens ATCC
27750]
gi|238873233|gb|ACR72943.1| small subunit ribosomal protein S18 [Eubacterium eligens ATCC
27750]
Length = 87
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C +DYKD+ L ++S+RGKI+P RI+ K QR L A+KRAR++ L
Sbjct: 22 KKVCAFCADANKVLDYKDVATLKHYVSERGKILPRRITGNCAKHQRALTVAVKRARHVAL 81
Query: 78 IAY 80
+ Y
Sbjct: 82 LPY 84
>gi|221633229|ref|YP_002522454.1| 30S ribosomal protein S18 [Thermomicrobium roseum DSM 5159]
gi|221155713|gb|ACM04840.1| 30S ribosomal protein S18 [Thermomicrobium roseum DSM 5159]
Length = 106
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C G +IDYKD L R+LS + KI P R + K QR+LA+AIKRA
Sbjct: 35 RYYPRKKVCSFCMDGIKKIDYKDFGRLRRYLSPQAKIEPRRATGTCAKHQRQLARAIKRA 94
Query: 73 RYLGLIAYV 81
R+L L+ +V
Sbjct: 95 RHLALLPFV 103
>gi|160916101|ref|ZP_02078308.1| hypothetical protein EUBDOL_02128 [Eubacterium dolichum DSM 3991]
gi|158431825|gb|EDP10114.1| hypothetical protein EUBDOL_02128 [Eubacterium dolichum DSM 3991]
Length = 76
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIETIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV+
Sbjct: 63 KRARQMALLPYVS 75
>gi|167760811|ref|ZP_02432938.1| hypothetical protein CLOSCI_03196 [Clostridium scindens ATCC
35704]
gi|167661698|gb|EDS05828.1| hypothetical protein CLOSCI_03196 [Clostridium scindens ATCC
35704]
Length = 88
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHVALMP 84
Query: 80 YV 81
YV
Sbjct: 85 YV 86
>gi|138897054|ref|YP_001127507.1| 30S ribosomal protein S18 [Geobacillus thermodenitrificans
NG80-2]
gi|134268567|gb|ABO68762.1| Ribosomal protein S18 [Geobacillus thermodenitrificans NG80-2]
Length = 91
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 15/88 (17%)
Query: 9 LLRRNVSHRRK---------------SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSR 53
++R+ + RRK C + IDYKD+ LL +F+S+RGKI+P R
Sbjct: 1 MIRKTGTERRKRTMAGRKGGRGKRRKVCYFTANNITHIDYKDVDLLKKFISERGKILPRR 60
Query: 54 ISSVSHKKQRELAKAIKRARYLGLIAYV 81
++ S K QR+L AIKRAR + L+ YV
Sbjct: 61 VTGTSAKYQRKLTVAIKRARQMALLPYV 88
>gi|320353929|ref|YP_004195268.1| 30S ribosomal protein S18P [Desulfobulbus propionicus DSM 2032]
gi|320122431|gb|ADW17977.1| SSU ribosomal protein S18P [Desulfobulbus propionicus DSM 2032]
Length = 79
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ V RR+ C IDYKD + L F+++RGKI+P RI K QREL +A+KR
Sbjct: 5 KKVFSRRRVCRFCTDKDVTIDYKDPKTLKNFVTERGKIIPRRIYGTCAKHQRELTEAVKR 64
Query: 72 ARYLGLIAY 80
AR L L+ Y
Sbjct: 65 ARQLALLPY 73
>gi|259500769|ref|ZP_05743671.1| 30S ribosomal protein S18 [Lactobacillus iners DSM 13335]
gi|302190780|ref|ZP_07267034.1| ribosomal protein S18 [Lactobacillus iners AB-1]
gi|309804084|ref|ZP_07698165.1| ribosomal protein S18 [Lactobacillus iners LactinV 11V1-d]
gi|309804852|ref|ZP_07698914.1| ribosomal protein S18 [Lactobacillus iners LactinV 09V1-c]
gi|309805906|ref|ZP_07699938.1| ribosomal protein S18 [Lactobacillus iners LactinV 03V1-b]
gi|309807825|ref|ZP_07701757.1| ribosomal protein S18 [Lactobacillus iners LactinV 01V1-a]
gi|309809776|ref|ZP_07703630.1| ribosomal protein S18 [Lactobacillus iners SPIN 2503V10-D]
gi|312871319|ref|ZP_07731417.1| ribosomal protein S18 [Lactobacillus iners LEAF 3008A-a]
gi|312872794|ref|ZP_07732859.1| ribosomal protein S18 [Lactobacillus iners LEAF 2062A-h1]
gi|312873277|ref|ZP_07733332.1| ribosomal protein S18 [Lactobacillus iners LEAF 2052A-d]
gi|312874897|ref|ZP_07734916.1| ribosomal protein S18 [Lactobacillus iners LEAF 2053A-b]
gi|315654139|ref|ZP_07907055.1| 30S ribosomal protein S18 [Lactobacillus iners ATCC 55195]
gi|325912331|ref|ZP_08174728.1| ribosomal protein S18 [Lactobacillus iners UPII 143-D]
gi|325913704|ref|ZP_08176066.1| ribosomal protein S18 [Lactobacillus iners UPII 60-B]
gi|329919826|ref|ZP_08276777.1| ribosomal protein S18 [Lactobacillus iners SPIN 1401G]
gi|259167463|gb|EEW51958.1| 30S ribosomal protein S18 [Lactobacillus iners DSM 13335]
gi|308163852|gb|EFO66118.1| ribosomal protein S18 [Lactobacillus iners LactinV 11V1-d]
gi|308165791|gb|EFO68012.1| ribosomal protein S18 [Lactobacillus iners LactinV 09V1-c]
gi|308167682|gb|EFO69829.1| ribosomal protein S18 [Lactobacillus iners LactinV 03V1-b]
gi|308168927|gb|EFO71013.1| ribosomal protein S18 [Lactobacillus iners LactinV 01V1-a]
gi|308169955|gb|EFO71994.1| ribosomal protein S18 [Lactobacillus iners SPIN 2503V10-D]
gi|311089642|gb|EFQ48067.1| ribosomal protein S18 [Lactobacillus iners LEAF 2053A-b]
gi|311091157|gb|EFQ49546.1| ribosomal protein S18 [Lactobacillus iners LEAF 2052A-d]
gi|311091836|gb|EFQ50215.1| ribosomal protein S18 [Lactobacillus iners LEAF 2062A-h1]
gi|311093333|gb|EFQ51679.1| ribosomal protein S18 [Lactobacillus iners LEAF 3008A-a]
gi|315488835|gb|EFU78481.1| 30S ribosomal protein S18 [Lactobacillus iners ATCC 55195]
gi|325475990|gb|EGC79159.1| ribosomal protein S18 [Lactobacillus iners UPII 143-D]
gi|325477063|gb|EGC80213.1| ribosomal protein S18 [Lactobacillus iners UPII 60-B]
gi|328937173|gb|EGG33601.1| ribosomal protein S18 [Lactobacillus iners SPIN 1401G]
Length = 78
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K +S IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+
Sbjct: 13 KVDFISANHIDYIDYKDVDLLKRFISERGKILPRRVTGTSAKNQRMLTVAIKRARVMGLL 72
Query: 79 AYVN 82
+V+
Sbjct: 73 PFVS 76
>gi|297585576|ref|YP_003701356.1| 30S ribosomal protein S18 [Bacillus selenitireducens MLS10]
gi|297144033|gb|ADI00791.1| ribosomal protein S18 [Bacillus selenitireducens MLS10]
Length = 75
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR RRK C + +IDYKD LL +F+S+RGKI+P R++ S K QR+L +A
Sbjct: 1 MARRGRPKRRKVCYFTVNKITKIDYKDTDLLKKFISERGKILPRRVTGTSAKYQRQLTRA 60
Query: 69 IKRARYLGLIAYVN 82
+KR+R + L+ +V
Sbjct: 61 VKRSRTMALLPFVT 74
>gi|163857367|ref|YP_001631665.1| 30S ribosomal protein S18 [Bordetella petrii DSM 12804]
gi|229559965|sp|A9IT96|RS18_BORPD RecName: Full=30S ribosomal protein S18
gi|163261095|emb|CAP43397.1| 30S ribosomal protein S18 [Bordetella petrii]
Length = 90
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 15 QQNPLFKRRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTKAHYQRQLDTAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|309776775|ref|ZP_07671749.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 3_1_53]
gi|308915523|gb|EFP61289.1| ribosomal protein S18 [Erysipelotrichaceae bacterium 3_1_53]
Length = 76
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIESIDYKDVELLKRFISANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV+
Sbjct: 63 KRARQMALLPYVS 75
>gi|167038652|ref|YP_001666230.1| 30S ribosomal protein S18 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167041002|ref|YP_001663987.1| 30S ribosomal protein S18 [Thermoanaerobacter sp. X514]
gi|256751478|ref|ZP_05492356.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus CCSD1]
gi|300913787|ref|ZP_07131104.1| ribosomal protein S18 [Thermoanaerobacter sp. X561]
gi|307265461|ref|ZP_07547017.1| ribosomal protein S18 [Thermoanaerobacter wiegelii Rt8.B1]
gi|307725527|ref|YP_003905278.1| 30S ribosomal protein S18 [Thermoanaerobacter sp. X513]
gi|320117044|ref|YP_004187203.1| 30S ribosomal protein S18 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326391890|ref|ZP_08213400.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus JW 200]
gi|229560075|sp|B0K8G2|RS18_THEP3 RecName: Full=30S ribosomal protein S18
gi|229560076|sp|B0K5L7|RS18_THEPX RecName: Full=30S ribosomal protein S18
gi|166855242|gb|ABY93651.1| ribosomal protein S18 [Thermoanaerobacter sp. X514]
gi|166857486|gb|ABY95894.1| ribosomal protein S18 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749697|gb|EEU62723.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus CCSD1]
gi|300890472|gb|EFK85617.1| ribosomal protein S18 [Thermoanaerobacter sp. X561]
gi|306919575|gb|EFN49793.1| ribosomal protein S18 [Thermoanaerobacter wiegelii Rt8.B1]
gi|307582588|gb|ADN55987.1| ribosomal protein S18 [Thermoanaerobacter sp. X513]
gi|319930135|gb|ADV80820.1| ribosomal protein S18 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325992052|gb|EGD50534.1| ribosomal protein S18 [Thermoanaerobacter ethanolicus JW 200]
Length = 88
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +IDYKD+ L +++++RGKI+P RI+ + QR+L KAIKRAR + L+
Sbjct: 25 VCAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTKAIKRARQIALLP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|295689696|ref|YP_003593389.1| 30S ribosomal protein S18 [Caulobacter segnis ATCC 21756]
gi|295431599|gb|ADG10771.1| ribosomal protein S18 [Caulobacter segnis ATCC 21756]
Length = 92
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR
Sbjct: 23 FFRRRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRAR 82
Query: 74 YLGLIAYV 81
+L L+ YV
Sbjct: 83 FLALLPYV 90
>gi|288572897|ref|ZP_06391254.1| ribosomal protein S18 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568638|gb|EFC90195.1| ribosomal protein S18 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 79
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R R K C +DYKD+ L +++S+RGKIVP R++ QR+L A+K
Sbjct: 7 KRRGKRRPKVCFYCVDKIDSVDYKDVDRLRKYISERGKIVPRRVTGNCANHQRQLTVALK 66
Query: 71 RARYLGLIAY 80
RARY+ L+ Y
Sbjct: 67 RARYMALLPY 76
>gi|323342372|ref|ZP_08082604.1| 30S ribosomal protein S18 [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463484|gb|EFY08678.1| 30S ribosomal protein S18 [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 77
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ RRK C + IDYKD+ LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FRKFRGPRRKVCYFTKNNVKTIDYKDVELLKRFISANGKIIPRRVTGTKAKYQRPLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV+
Sbjct: 63 KRARQMALLPYVS 75
>gi|300721500|ref|YP_003710775.1| 30S ribosomal subunit protein S18 [Xenorhabdus nematophila ATCC
19061]
gi|297627992|emb|CBJ88541.1| 30S ribosomal subunit protein S18 [Xenorhabdus nematophila ATCC
19061]
Length = 75
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RHLSLLPYTD 72
>gi|325474233|gb|EGC77421.1| 30S ribosomal protein S18 [Treponema denticola F0402]
Length = 99
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C + IDYK+ L RF+++RGKI+P RI+ K QR+LA IKRAR
Sbjct: 31 FYRKKVCRFCAQKVK-IDYKEPDALRRFITERGKILPRRITGTCAKHQRKLAVEIKRARA 89
Query: 75 LGLIAYV 81
+ L+ +V
Sbjct: 90 VALLPFV 96
>gi|312796133|ref|YP_004029055.1| SSU ribosomal protein S18P [Burkholderia rhizoxinica HKI 454]
gi|312167908|emb|CBW74911.1| SSU ribosomal protein S18P [Burkholderia rhizoxinica HKI 454]
Length = 91
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 1 MAEVAPTPLLRR-----NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
MA +R + R+K C + IDYKDI L F+ + GKI P+R++
Sbjct: 1 MARPTGKKFDKRRQQQNPLFKRKKFCRFTAASVEYIDYKDIETLKDFIGENGKITPARLT 60
Query: 56 SVSHKKQRELAKAIKRARYLGLIAYVNL 83
QR+L AIKRAR+L L+ Y +L
Sbjct: 61 GTKAHYQRQLDTAIKRARFLALLPYTDL 88
>gi|253996552|ref|YP_003048616.1| 30S ribosomal protein S18 [Methylotenera mobilis JLW8]
gi|253983231|gb|ACT48089.1| ribosomal protein S18 [Methylotenera mobilis JLW8]
Length = 77
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ LL F+S+ KI+P+R++ + QR+L A+
Sbjct: 1 MARDMYKRRRYCRFSAEGIKEVDYKDVDLLKDFISENAKIIPARMTGTKARYQRQLTSAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|332520811|ref|ZP_08397271.1| ribosomal protein S18 [Lacinutrix algicola 5H-3-7-4]
gi|332043341|gb|EGI79537.1| ribosomal protein S18 [Lacinutrix algicola 5H-3-7-4]
Length = 98
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + S ++K C G +DYKD L F++++GKI+P R++ S K QR+++ A+
Sbjct: 22 LNIDTSKQKKYCRFKKSGIKYVDYKDADWLLGFVNEQGKILPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALLPYVT 94
>gi|149182312|ref|ZP_01860791.1| RpsR [Bacillus sp. SG-1]
gi|148850004|gb|EDL64175.1| RpsR [Bacillus sp. SG-1]
Length = 65
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + G IDYKD+ LL +F+S+RGKI+P R++ S K QR L +AIKRAR + L+ Y
Sbjct: 2 CYFTSNGITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRRLTRAIKRARTMALLPY 61
Query: 81 V 81
V
Sbjct: 62 V 62
>gi|254499290|ref|ZP_05111964.1| 30S ribosomal protein S18 [Legionella drancourtii LLAP12]
gi|254351487|gb|EET10348.1| 30S ribosomal protein S18 [Legionella drancourtii LLAP12]
Length = 75
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C S +G IDYKDI LL ++S+ GKIVPSRI+ + QR+LAKAIK AR
Sbjct: 4 YFRRKKMCRFSAEGGNEIDYKDINLLKNYISETGKIVPSRITGTQTRFQRQLAKAIKHAR 63
Query: 74 YLGLIAYVN 82
++GL+ Y +
Sbjct: 64 FIGLLPYCD 72
>gi|253581023|ref|ZP_04858284.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847686|gb|EES75655.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 87
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
E +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GERPDSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L AIKRAR++ ++ Y+
Sbjct: 66 QRALTVAIKRARHMSMMPYI 85
>gi|167462797|ref|ZP_02327886.1| 30S ribosomal protein S18 (BS21) [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381355|ref|ZP_08055358.1| 30S ribosomal protein S18-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154931|gb|EFX47202.1| 30S ribosomal protein S18-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 100
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E TP RRK C + IDYKDI L +F+S+RGKI+P R++ S K Q
Sbjct: 20 ERKFTPRRGGKGGKRRKVCYFTANKIKHIDYKDIDTLKKFISERGKILPRRVTGTSAKYQ 79
Query: 63 RELAKAIKRARYLGLIAYVN 82
R L AIKRAR + L+ Y
Sbjct: 80 RMLTIAIKRARQVALLPYTT 99
>gi|149926828|ref|ZP_01915087.1| 30S ribosomal protein S18 [Limnobacter sp. MED105]
gi|149824380|gb|EDM83598.1| 30S ribosomal protein S18 [Limnobacter sp. MED105]
Length = 89
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + R+K C + +IDYKDI L F+S+ GKI+P+RI+ QR+L AI
Sbjct: 15 QQNPLFKRKKFCRFTVGKVEQIDYKDIDTLKDFISENGKIMPARITGTKANYQRQLDTAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|115378659|ref|ZP_01465809.1| ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|310823079|ref|YP_003955437.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|115364325|gb|EAU63410.1| ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|309396151|gb|ADO73610.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
Length = 146
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K C + ++D+KD L F+++RGKI+P RIS K QRE+A AIKRAR
Sbjct: 76 FGRKKVCRFCAEKNAKVDFKDQATLKYFVTERGKIIPRRISGNCAKHQREVAIAIKRARG 135
Query: 75 LGLIAY 80
L L+ Y
Sbjct: 136 LALLPY 141
>gi|22537851|ref|NP_688702.1| 30S ribosomal protein S18 [Streptococcus agalactiae 2603V/R]
gi|25011796|ref|NP_736191.1| 30S ribosomal protein S18 [Streptococcus agalactiae NEM316]
gi|76786818|ref|YP_330321.1| 30S ribosomal protein S18 [Streptococcus agalactiae A909]
gi|76798964|ref|ZP_00781165.1| ribosomal protein S18 [Streptococcus agalactiae 18RS21]
gi|77406986|ref|ZP_00784002.1| ribosomal protein S18 [Streptococcus agalactiae H36B]
gi|77410339|ref|ZP_00786755.1| ribosomal protein S18 [Streptococcus agalactiae COH1]
gi|77412637|ref|ZP_00788913.1| ribosomal protein S18 [Streptococcus agalactiae CJB111]
gi|228477147|ref|ZP_04061785.1| ribosomal protein S18 [Streptococcus salivarius SK126]
gi|312863068|ref|ZP_07723306.1| ribosomal protein S18 [Streptococcus vestibularis F0396]
gi|322516033|ref|ZP_08068970.1| 30S ribosomal protein S18 [Streptococcus vestibularis ATCC 49124]
gi|59798902|sp|Q8DXY3|RS18_STRA5 RecName: Full=30S ribosomal protein S18
gi|59798903|sp|Q8E3K2|RS18_STRA3 RecName: Full=30S ribosomal protein S18
gi|123601328|sp|Q3JZI2|RS18_STRA1 RecName: Full=30S ribosomal protein S18
gi|22534746|gb|AAN00575.1|AE014269_19 ribosomal protein S18 [Streptococcus agalactiae 2603V/R]
gi|24413337|emb|CAD47416.1| 30S ribosomal protein S18 [Streptococcus agalactiae NEM316]
gi|76561875|gb|ABA44459.1| ribosomal protein S18 [Streptococcus agalactiae A909]
gi|76585685|gb|EAO62242.1| ribosomal protein S18 [Streptococcus agalactiae 18RS21]
gi|77161309|gb|EAO72344.1| ribosomal protein S18 [Streptococcus agalactiae CJB111]
gi|77171052|gb|EAO74505.1| ribosomal protein S18 [Streptococcus agalactiae COH1]
gi|77174410|gb|EAO77263.1| ribosomal protein S18 [Streptococcus agalactiae H36B]
gi|228251166|gb|EEK10337.1| ribosomal protein S18 [Streptococcus salivarius SK126]
gi|311100604|gb|EFQ58809.1| ribosomal protein S18 [Streptococcus vestibularis F0396]
gi|319745682|gb|EFV97981.1| 30S ribosomal protein S18 [Streptococcus agalactiae ATCC 13813]
gi|322125448|gb|EFX96794.1| 30S ribosomal protein S18 [Streptococcus vestibularis ATCC 49124]
Length = 79
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ YVN
Sbjct: 66 RARVMALMPYVN 77
>gi|325979062|ref|YP_004288778.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178990|emb|CBZ49034.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 79
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RSGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ +VN
Sbjct: 66 RARVMALMPFVN 77
>gi|146319486|ref|YP_001199198.1| 30S ribosomal protein S18 [Streptococcus suis 05ZYH33]
gi|146321678|ref|YP_001201389.1| 30S ribosomal protein S18 [Streptococcus suis 98HAH33]
gi|223934218|ref|ZP_03626153.1| ribosomal protein S18 [Streptococcus suis 89/1591]
gi|253752497|ref|YP_003025638.1| 30S ribosomal protein S18 [Streptococcus suis SC84]
gi|253754323|ref|YP_003027464.1| 30S ribosomal protein S18 [Streptococcus suis P1/7]
gi|253756257|ref|YP_003029397.1| 30S ribosomal protein S18 [Streptococcus suis BM407]
gi|302024436|ref|ZP_07249647.1| 30S ribosomal protein S18 [Streptococcus suis 05HAS68]
gi|330833440|ref|YP_004402265.1| 30S ribosomal protein S18 [Streptococcus suis ST3]
gi|166222247|sp|A4W3Q0|RS18_STRS2 RecName: Full=30S ribosomal protein S18
gi|166222249|sp|A4VXF9|RS18_STRSY RecName: Full=30S ribosomal protein S18
gi|145690292|gb|ABP90798.1| 30S ribosomal protein S18 [Streptococcus suis 05ZYH33]
gi|145692484|gb|ABP92989.1| 30S ribosomal protein S18 [Streptococcus suis 98HAH33]
gi|223897115|gb|EEF63541.1| ribosomal protein S18 [Streptococcus suis 89/1591]
gi|251816786|emb|CAZ52429.1| 30S ribosomal protein S18 [Streptococcus suis SC84]
gi|251818721|emb|CAZ56557.1| 30S ribosomal protein S18 [Streptococcus suis BM407]
gi|251820569|emb|CAR47325.1| 30S ribosomal protein S18 [Streptococcus suis P1/7]
gi|292559103|gb|ADE32104.1| 30S ribosomal protein S18 [Streptococcus suis GZ1]
gi|319758905|gb|ADV70847.1| 30S ribosomal protein S18 [Streptococcus suis JS14]
gi|329307663|gb|AEB82079.1| 30S ribosomal protein S18 [Streptococcus suis ST3]
Length = 79
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDYIAANKIEYVDYKDTELLSRFISERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ +VN
Sbjct: 66 RARVMALLPFVN 77
>gi|125974670|ref|YP_001038580.1| 30S ribosomal protein S18 [Clostridium thermocellum ATCC 27405]
gi|256004131|ref|ZP_05429115.1| ribosomal protein S18 [Clostridium thermocellum DSM 2360]
gi|281418858|ref|ZP_06249877.1| ribosomal protein S18 [Clostridium thermocellum JW20]
gi|166220948|sp|A3DHF8|RS18_CLOTH RecName: Full=30S ribosomal protein S18
gi|125714895|gb|ABN53387.1| SSU ribosomal protein S18P [Clostridium thermocellum ATCC 27405]
gi|255991879|gb|EEU01977.1| ribosomal protein S18 [Clostridium thermocellum DSM 2360]
gi|281407942|gb|EFB38201.1| ribosomal protein S18 [Clostridium thermocellum JW20]
gi|316941795|gb|ADU75829.1| ribosomal protein S18 [Clostridium thermocellum DSM 1313]
Length = 94
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C RIDYKD+ L +++S+RGKI+P RIS K QR+L AIKRAR++
Sbjct: 28 KKKICAFCVDKVERIDYKDVAKLKKYISERGKILPRRISGNCAKHQRQLTVAIKRARHIA 87
Query: 77 LIAYV 81
L+ Y
Sbjct: 88 LLPYT 92
>gi|227540353|ref|ZP_03970402.1| ribosomal protein S18 [Sphingobacterium spiritivorum ATCC 33300]
gi|300771167|ref|ZP_07081043.1| 30S ribosomal protein S18 [Sphingobacterium spiritivorum ATCC
33861]
gi|227239677|gb|EEI89692.1| ribosomal protein S18 [Sphingobacterium spiritivorum ATCC 33300]
gi|300761837|gb|EFK58657.1| 30S ribosomal protein S18 [Sphingobacterium spiritivorum ATCC
33861]
Length = 87
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR++G
Sbjct: 18 RKKYCRFKKNGIKYIDYKDANFLLKFVNDQGKILPRRLTGTSLKFQRKVAQAVKRARHIG 77
Query: 77 LIAYVN 82
L+ YV
Sbjct: 78 LLPYVT 83
>gi|317133426|ref|YP_004092740.1| ribosomal protein S18 [Ethanoligenens harbinense YUAN-3]
gi|315471405|gb|ADU28009.1| ribosomal protein S18 [Ethanoligenens harbinense YUAN-3]
Length = 84
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKDI L ++LS+R KI+P R++ QREL AIKRAR+L L+
Sbjct: 21 VCSFCVDKVESIDYKDIAKLRKYLSERAKILPRRVTGTCAHHQRELTIAIKRARHLALLP 80
Query: 80 YVN 82
YV+
Sbjct: 81 YVS 83
>gi|297545636|ref|YP_003677938.1| 30S ribosomal protein S18 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843411|gb|ADH61927.1| ribosomal protein S18 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 89
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +IDYKD+ L +++++RGKI+P RI+ + QR+L +AIKRAR + L+
Sbjct: 26 VCAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTRAIKRARQIALLP 85
Query: 80 YV 81
Y
Sbjct: 86 YT 87
>gi|320528729|ref|ZP_08029881.1| ribosomal protein S18 [Solobacterium moorei F0204]
gi|320130939|gb|EFW23517.1| ribosomal protein S18 [Solobacterium moorei F0204]
Length = 76
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 42/73 (57%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ RRK C + IDYKD+ LL +F+S GKI P R++ K QR LA AI
Sbjct: 3 FRKQRMGRRKVCYFTKNNITYIDYKDVELLKKFVSANGKITPRRVTGTRAKYQRMLAIAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYVE 75
>gi|15675656|ref|NP_269830.1| 30S ribosomal protein S18 [Streptococcus pyogenes M1 GAS]
gi|19746762|ref|NP_607898.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS8232]
gi|21911116|ref|NP_665384.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS315]
gi|28895199|ref|NP_801549.1| 30S ribosomal protein S18 [Streptococcus pyogenes SSI-1]
gi|50914911|ref|YP_060883.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10394]
gi|71904202|ref|YP_281005.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS6180]
gi|71911366|ref|YP_282916.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS5005]
gi|94989188|ref|YP_597289.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS9429]
gi|94991129|ref|YP_599229.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10270]
gi|94993075|ref|YP_601174.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS2096]
gi|94995008|ref|YP_603106.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS10750]
gi|139473173|ref|YP_001127888.1| 30S ribosomal protein S18 [Streptococcus pyogenes str. Manfredo]
gi|195977489|ref|YP_002122733.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|222153664|ref|YP_002562841.1| 30S ribosomal protein S18 [Streptococcus uberis 0140J]
gi|225869195|ref|YP_002745143.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus]
gi|225869851|ref|YP_002745798.1| 30S ribosomal protein S18 [Streptococcus equi subsp. equi 4047]
gi|251783273|ref|YP_002997578.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306826730|ref|ZP_07460032.1| 30S ribosomal protein S18 [Streptococcus pyogenes ATCC 10782]
gi|313889713|ref|ZP_07823356.1| ribosomal protein S18 [Streptococcus pseudoporcinus SPIN 20026]
gi|332523695|ref|ZP_08399947.1| ribosomal protein S18 [Streptococcus porcinus str. Jelinkova 176]
gi|54039418|sp|P66476|RS18_STRP3 RecName: Full=30S ribosomal protein S18
gi|54039419|sp|P66477|RS18_STRP8 RecName: Full=30S ribosomal protein S18
gi|54042151|sp|P66475|RS18_STRP1 RecName: Full=30S ribosomal protein S18
gi|59798612|sp|Q5XA63|RS18_STRP6 RecName: Full=30S ribosomal protein S18
gi|122986815|sp|Q1J524|RS18_STRPF RecName: Full=30S ribosomal protein S18
gi|123080292|sp|Q1JF74|RS18_STRPD RecName: Full=30S ribosomal protein S18
gi|123382262|sp|Q1JA31|RS18_STRPB RecName: Full=30S ribosomal protein S18
gi|123382494|sp|Q1JK78|RS18_STRPC RecName: Full=30S ribosomal protein S18
gi|123761392|sp|Q48RL0|RS18_STRPM RecName: Full=30S ribosomal protein S18
gi|166222246|sp|A2RCR6|RS18_STRPG RecName: Full=30S ribosomal protein S18
gi|229560067|sp|B4U153|RS18_STREM RecName: Full=30S ribosomal protein S18
gi|254812956|sp|C0MB81|RS18_STRE4 RecName: Full=30S ribosomal protein S18
gi|254812959|sp|B9DVK2|RS18_STRU0 RecName: Full=30S ribosomal protein S18
gi|259494819|sp|C0MEL9|RS18_STRS7 RecName: Full=30S ribosomal protein S18
gi|13622868|gb|AAK34551.1| 30S ribosomal protein S18 [Streptococcus pyogenes M1 GAS]
gi|19748993|gb|AAL98397.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS8232]
gi|21905326|gb|AAM80187.1| 30S ribosomal protein S18 [Streptococcus pyogenes MGAS315]
gi|28810445|dbj|BAC63382.1| 30S ribosomal protein S18 [Streptococcus pyogenes SSI-1]
gi|50903985|gb|AAT87700.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10394]
gi|71803297|gb|AAX72650.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS6180]
gi|71854148|gb|AAZ52171.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS5005]
gi|94542696|gb|ABF32745.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS9429]
gi|94544637|gb|ABF34685.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10270]
gi|94546583|gb|ABF36630.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS2096]
gi|94548516|gb|ABF38562.1| SSU ribosomal protein S18P [Streptococcus pyogenes MGAS10750]
gi|134271419|emb|CAM29639.1| 30S ribosomal protein S18 [Streptococcus pyogenes str. Manfredo]
gi|195974194|gb|ACG61720.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|222114477|emb|CAR43335.1| 30S ribosomal protein S18 [Streptococcus uberis 0140J]
gi|225699255|emb|CAW92568.1| 30S ribosomal protein S18 [Streptococcus equi subsp. equi 4047]
gi|225702471|emb|CAX00375.1| 30S ribosomal protein S18 [Streptococcus equi subsp.
zooepidemicus]
gi|242391905|dbj|BAH82364.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304431019|gb|EFM34026.1| 30S ribosomal protein S18 [Streptococcus pyogenes ATCC 10782]
gi|313122010|gb|EFR45106.1| ribosomal protein S18 [Streptococcus pseudoporcinus SPIN 20026]
gi|322412656|gb|EFY03564.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323127997|gb|ADX25294.1| 30S ribosomal protein S18 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|332314959|gb|EGJ27944.1| ribosomal protein S18 [Streptococcus porcinus str. Jelinkova 176]
Length = 79
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDFIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ YVN
Sbjct: 66 RARVMALMPYVN 77
>gi|255066238|ref|ZP_05318093.1| ribosomal protein S18 [Neisseria sicca ATCC 29256]
gi|255049448|gb|EET44912.1| ribosomal protein S18 [Neisseria sicca ATCC 29256]
Length = 76
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C + + +D+K + LL F+S+ GKI+P+RI+ QR+LA A+
Sbjct: 1 MARQSFKRRKFCRFTAEKIQEVDHKQVDLLKDFISENGKIIPARITGTKAHYQRQLATAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|15617154|ref|NP_240367.1| 30S ribosomal protein S18 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681905|ref|YP_002468291.1| 30S ribosomal protein S18 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682460|ref|YP_002468844.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471611|ref|ZP_05635610.1| 30S ribosomal protein S18 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387089|sp|P57626|RS18_BUCAI RecName: Full=30S ribosomal protein S18
gi|254765415|sp|B8D8C7|RS18_BUCA5 RecName: Full=30S ribosomal protein S18
gi|254765416|sp|B8D884|RS18_BUCAT RecName: Full=30S ribosomal protein S18
gi|25294830|pir||E84995 30S ribosomal protein S18 [imported] - Buchnera sp. (strain APS)
gi|10039219|dbj|BAB13253.1| 30S ribosomal protein S18 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622193|gb|ACL30349.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624748|gb|ACL30903.1| 30S ribosomal protein S18 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086283|gb|ADP66365.1| 30S ribosomal protein S18 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086859|gb|ADP66940.1| 30S ribosomal protein S18 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087447|gb|ADP67527.1| 30S ribosomal protein S18 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087935|gb|ADP68014.1| 30S ribosomal protein S18 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIAVLKNYITESGKIVPSRITGTRAKYQRQLSRAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|282600706|ref|ZP_05979550.2| 30S ribosomal protein S18 [Subdoligranulum variabile DSM 15176]
gi|282571488|gb|EFB77023.1| 30S ribosomal protein S18 [Subdoligranulum variabile DSM 15176]
Length = 100
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P+ R R+K C IDYKD+ L +++S+R KI+P R++ Q
Sbjct: 24 DRSSRPMHR----GRKKVCSFCVDRVEHIDYKDLPRLRKYVSERAKIIPRRVTGTCAFHQ 79
Query: 63 RELAKAIKRARYLGLIAYVN 82
REL AIKRARY+ L+ YV+
Sbjct: 80 RELTVAIKRARYMALMPYVS 99
>gi|205562195|sp|Q0ADI8|RS18_NITEC RecName: Full=30S ribosomal protein S18
Length = 76
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R + R+K C + +G +IDYKD+ LL F+S+ G+I+P+RI+ QR+L A
Sbjct: 1 MANRPLFKRKKFCRFTAEGIKKIDYKDVDLLKDFISENGRIIPARITGTRSYYQRQLNLA 60
Query: 69 IKRARYLGLIAYVN 82
I+RAR+L L+ Y +
Sbjct: 61 IERARFLALLPYTD 74
>gi|227874245|ref|ZP_03992444.1| possible ribosomal protein S18 [Oribacterium sinus F0268]
gi|227839914|gb|EEJ50345.1| possible ribosomal protein S18 [Oribacterium sinus F0268]
Length = 90
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 2 AEVAPTPLLRR---NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
++ + + RR R+K C G +DYKD+ L +++S+RGKI+P RI+
Sbjct: 6 SDKSGSARPRRAGAGFRSRKKVCGFCGDKVKPVDYKDVGTLRKYISERGKILPRRITGSC 65
Query: 59 HKKQRELAKAIKRARYLGLIAY 80
QR + AIKRAR++ L+ Y
Sbjct: 66 ALHQRAITTAIKRARHIALLPY 87
>gi|260425912|ref|ZP_05779891.1| ribosomal protein S18 [Citreicella sp. SE45]
gi|260420404|gb|EEX13655.1| ribosomal protein S18 [Citreicella sp. SE45]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPAIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAYV 81
IKRAR+L L+ YV
Sbjct: 61 IKRARFLALLPYV 73
>gi|21672804|ref|NP_660871.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009169|sp|Q8K919|RS18_BUCAP RecName: Full=30S ribosomal protein S18
gi|21623454|gb|AAM68082.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIK+A
Sbjct: 3 RYFRRRKFCRFTAEGIQEIDYKDIAMLKNYITENGKIVPSRITGTRAKFQRQLSRAIKKA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|55821724|ref|YP_140166.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMG 18311]
gi|55823644|ref|YP_142085.1| 30S ribosomal protein S18 [Streptococcus thermophilus CNRZ1066]
gi|116628444|ref|YP_821063.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMD-9]
gi|81676514|sp|Q5LY50|RS18_STRT1 RecName: Full=30S ribosomal protein S18
gi|81676666|sp|Q5M2Q5|RS18_STRT2 RecName: Full=30S ribosomal protein S18
gi|122266961|sp|Q03IV5|RS18_STRTD RecName: Full=30S ribosomal protein S18
gi|55737709|gb|AAV61351.1| 30S ribosomal protein S18 [Streptococcus thermophilus LMG 18311]
gi|55739629|gb|AAV63270.1| 30S ribosomal protein S18 [Streptococcus thermophilus CNRZ1066]
gi|116101721|gb|ABJ66867.1| SSU ribosomal protein S18P [Streptococcus thermophilus LMD-9]
gi|312279064|gb|ADQ63721.1| 30S ribosomal protein S18 [Streptococcus thermophilus ND03]
Length = 79
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKFDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ YVN
Sbjct: 66 RARVMALMPYVN 77
>gi|254467876|ref|ZP_05081282.1| ribosomal protein S18 [beta proteobacterium KB13]
gi|207086686|gb|EDZ63969.1| ribosomal protein S18 [beta proteobacterium KB13]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ LL F+ + GKI+P+RI+ + QR+L A+
Sbjct: 1 MARDMIRRRRYCRFSAEGIKEVDYKDVDLLKDFILENGKIIPARITGTKARYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|153810611|ref|ZP_01963279.1| hypothetical protein RUMOBE_00992 [Ruminococcus obeum ATCC 29174]
gi|149833790|gb|EDM88871.1| hypothetical protein RUMOBE_00992 [Ruminococcus obeum ATCC 29174]
Length = 87
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
E +P+ RR R+K C GK IDYKD+ L +++S+RGKI+P RI+ K
Sbjct: 6 GERPDSPMKRRGGRRRKKVCVFCGKENNEIDYKDVAKLRKYVSERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L A+KRAR+L ++ YV
Sbjct: 66 QRALTVAVKRARHLSMMPYV 85
>gi|315652548|ref|ZP_07905530.1| 30S ribosomal protein S18 [Eubacterium saburreum DSM 3986]
gi|315485191|gb|EFU75591.1| 30S ribosomal protein S18 [Eubacterium saburreum DSM 3986]
Length = 89
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ R+K C G+ IDYKD+ L +++S+RGKI+P RIS K QRE+ AIK+AR
Sbjct: 20 LRRRKKVCAFCGEKEKAIDYKDVATLRKYISERGKILPRRISGSCAKHQREITVAIKKAR 79
Query: 74 YLGLIAYV 81
++ L+ YV
Sbjct: 80 HIALLPYV 87
>gi|311746134|ref|ZP_07719919.1| ribosomal protein S18 [Algoriphagus sp. PR1]
gi|126576355|gb|EAZ80633.1| ribosomal protein S18 [Algoriphagus sp. PR1]
Length = 83
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C G IDYKD L +F++++GKI+P R++ S K Q+++A AIK+AR+
Sbjct: 12 ENRKKYCRFKKHGIKYIDYKDPNFLLKFVNEQGKILPRRLTGNSAKYQKKVANAIKKARH 71
Query: 75 LGLIAYVN 82
L L+ +V
Sbjct: 72 LALLPFVT 79
>gi|53719096|ref|YP_108082.1| 30S ribosomal protein S18 [Burkholderia pseudomallei K96243]
gi|53723579|ref|YP_103058.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 23344]
gi|67640202|ref|ZP_00439017.1| 30S ribosomal protein S18 [Burkholderia mallei GB8 horse 4]
gi|76812240|ref|YP_333809.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710b]
gi|83719433|ref|YP_442702.1| 30S ribosomal protein S18 [Burkholderia thailandensis E264]
gi|107028949|ref|YP_626044.1| 30S ribosomal protein S18 [Burkholderia cenocepacia AU 1054]
gi|116689893|ref|YP_835516.1| 30S ribosomal protein S18 [Burkholderia cenocepacia HI2424]
gi|121598687|ref|YP_993212.1| 30S ribosomal protein S18 [Burkholderia mallei SAVP1]
gi|124384536|ref|YP_001026013.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10229]
gi|126438832|ref|YP_001059285.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 668]
gi|126448650|ref|YP_001080720.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10247]
gi|126454887|ref|YP_001066553.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106a]
gi|134278013|ref|ZP_01764728.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 305]
gi|161524575|ref|YP_001579587.1| 30S ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|167002902|ref|ZP_02268692.1| 30S ribosomal protein S18 [Burkholderia mallei PRL-20]
gi|167562481|ref|ZP_02355397.1| ribosomal protein S18 [Burkholderia oklahomensis EO147]
gi|167569665|ref|ZP_02362539.1| ribosomal protein S18 [Burkholderia oklahomensis C6786]
gi|167581641|ref|ZP_02374515.1| ribosomal protein S18 [Burkholderia thailandensis TXDOH]
gi|167586988|ref|ZP_02379376.1| ribosomal protein S18 [Burkholderia ubonensis Bu]
gi|167619761|ref|ZP_02388392.1| ribosomal protein S18 [Burkholderia thailandensis Bt4]
gi|167719192|ref|ZP_02402428.1| ribosomal protein S18 [Burkholderia pseudomallei DM98]
gi|167738194|ref|ZP_02410968.1| ribosomal protein S18 [Burkholderia pseudomallei 14]
gi|167815383|ref|ZP_02447063.1| ribosomal protein S18 [Burkholderia pseudomallei 91]
gi|167823791|ref|ZP_02455262.1| ribosomal protein S18 [Burkholderia pseudomallei 9]
gi|167836331|ref|ZP_02463214.1| ribosomal protein S18 [Burkholderia thailandensis MSMB43]
gi|167845334|ref|ZP_02470842.1| ribosomal protein S18 [Burkholderia pseudomallei B7210]
gi|167893876|ref|ZP_02481278.1| ribosomal protein S18 [Burkholderia pseudomallei 7894]
gi|167902330|ref|ZP_02489535.1| ribosomal protein S18 [Burkholderia pseudomallei NCTC 13177]
gi|167910568|ref|ZP_02497659.1| ribosomal protein S18 [Burkholderia pseudomallei 112]
gi|167918594|ref|ZP_02505685.1| ribosomal protein S18 [Burkholderia pseudomallei BCC215]
gi|189350669|ref|YP_001946297.1| 30S ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|217421371|ref|ZP_03452875.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 576]
gi|221198144|ref|ZP_03571190.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2M]
gi|221208365|ref|ZP_03581368.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2]
gi|221215116|ref|ZP_03588083.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD1]
gi|226197276|ref|ZP_03792853.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pakistan 9]
gi|237812611|ref|YP_002897062.1| ribosomal protein S18 [Burkholderia pseudomallei MSHR346]
gi|242316691|ref|ZP_04815707.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106b]
gi|254178433|ref|ZP_04885088.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 10399]
gi|254179492|ref|ZP_04886091.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1655]
gi|254189116|ref|ZP_04895627.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pasteur
52237]
gi|254197494|ref|ZP_04903916.1| 30S ribosomal protein S18 [Burkholderia pseudomallei S13]
gi|254200004|ref|ZP_04906370.1| 30S ribosomal protein S18 [Burkholderia mallei FMH]
gi|254206337|ref|ZP_04912689.1| 30S ribosomal protein S18 [Burkholderia mallei JHU]
gi|254248017|ref|ZP_04941338.1| Ribosomal protein S18 [Burkholderia cenocepacia PC184]
gi|254261784|ref|ZP_04952838.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710a]
gi|254297374|ref|ZP_04964827.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 406e]
gi|254358248|ref|ZP_04974521.1| 30S ribosomal protein S18 [Burkholderia mallei 2002721280]
gi|257138914|ref|ZP_05587176.1| 30S ribosomal protein S18 [Burkholderia thailandensis E264]
gi|59798633|sp|Q62JR1|RS18_BURMA RecName: Full=30S ribosomal protein S18
gi|59798645|sp|Q63UY4|RS18_BURPS RecName: Full=30S ribosomal protein S18
gi|123179948|sp|Q1BH34|RS18_BURCA RecName: Full=30S ribosomal protein S18
gi|123598874|sp|Q3JRJ4|RS18_BURP1 RecName: Full=30S ribosomal protein S18
gi|123753784|sp|Q2SWJ7|RS18_BURTA RecName: Full=30S ribosomal protein S18
gi|166220929|sp|A0K7Z6|RS18_BURCH RecName: Full=30S ribosomal protein S18
gi|166220930|sp|A3MKD4|RS18_BURM7 RecName: Full=30S ribosomal protein S18
gi|166220931|sp|A2S244|RS18_BURM9 RecName: Full=30S ribosomal protein S18
gi|166220932|sp|A1V4Q9|RS18_BURMS RecName: Full=30S ribosomal protein S18
gi|166220933|sp|A3NW32|RS18_BURP0 RecName: Full=30S ribosomal protein S18
gi|166220934|sp|A3NAB4|RS18_BURP6 RecName: Full=30S ribosomal protein S18
gi|229559971|sp|A9AJW3|RS18_BURM1 RecName: Full=30S ribosomal protein S18
gi|52209510|emb|CAH35462.1| 30S ribosomal protein S18 [Burkholderia pseudomallei K96243]
gi|52427002|gb|AAU47595.1| ribosomal protein S18 [Burkholderia mallei ATCC 23344]
gi|76581693|gb|ABA51168.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710b]
gi|83653258|gb|ABC37321.1| ribosomal protein S18 [Burkholderia thailandensis E264]
gi|105898113|gb|ABF81071.1| SSU ribosomal protein S18P [Burkholderia cenocepacia AU 1054]
gi|116647982|gb|ABK08623.1| SSU ribosomal protein S18P [Burkholderia cenocepacia HI2424]
gi|121227497|gb|ABM50015.1| 30S ribosomal protein S18 [Burkholderia mallei SAVP1]
gi|124292556|gb|ABN01825.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10229]
gi|124872793|gb|EAY64509.1| Ribosomal protein S18 [Burkholderia cenocepacia PC184]
gi|126218325|gb|ABN81831.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 668]
gi|126228529|gb|ABN92069.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106a]
gi|126241520|gb|ABO04613.1| 30S ribosomal protein S18 [Burkholderia mallei NCTC 10247]
gi|134251663|gb|EBA51742.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 305]
gi|147749600|gb|EDK56674.1| 30S ribosomal protein S18 [Burkholderia mallei FMH]
gi|147753780|gb|EDK60845.1| 30S ribosomal protein S18 [Burkholderia mallei JHU]
gi|148027375|gb|EDK85396.1| 30S ribosomal protein S18 [Burkholderia mallei 2002721280]
gi|157807650|gb|EDO84820.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 406e]
gi|157936795|gb|EDO92465.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pasteur
52237]
gi|160342004|gb|ABX15090.1| ribosomal protein S18 [Burkholderia multivorans ATCC 17616]
gi|160699472|gb|EDP89442.1| 30S ribosomal protein S18 [Burkholderia mallei ATCC 10399]
gi|169654235|gb|EDS86928.1| 30S ribosomal protein S18 [Burkholderia pseudomallei S13]
gi|184210032|gb|EDU07075.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1655]
gi|189334691|dbj|BAG43761.1| small subunit ribosomal protein S18 [Burkholderia multivorans
ATCC 17616]
gi|217395113|gb|EEC35131.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 576]
gi|221165052|gb|EED97531.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD1]
gi|221171778|gb|EEE04222.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2]
gi|221182076|gb|EEE14477.1| 30S ribosomal protein S18 [Burkholderia multivorans CGD2M]
gi|225930655|gb|EEH26665.1| 30S ribosomal protein S18 [Burkholderia pseudomallei Pakistan 9]
gi|237506129|gb|ACQ98447.1| ribosomal protein S18 [Burkholderia pseudomallei MSHR346]
gi|238520888|gb|EEP84344.1| 30S ribosomal protein S18 [Burkholderia mallei GB8 horse 4]
gi|242139930|gb|EES26332.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1106b]
gi|243061456|gb|EES43642.1| 30S ribosomal protein S18 [Burkholderia mallei PRL-20]
gi|254220473|gb|EET09857.1| 30S ribosomal protein S18 [Burkholderia pseudomallei 1710a]
gi|325522549|gb|EGD01101.1| 30S ribosomal protein S18 [Burkholderia sp. TJI49]
Length = 91
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 1 MAEVAPTPLLRR-----NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
MA +R + R+K C + G +IDYKD L F+ + GKI P+R++
Sbjct: 1 MARPTGKKFDKRRQQQNPLFKRKKFCRFTAAGVEQIDYKDTETLKDFIGENGKITPARLT 60
Query: 56 SVSHKKQRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR+L L+ Y +
Sbjct: 61 GTKAHYQRQLDTAIKRARFLALLPYTD 87
>gi|73539550|ref|YP_299917.1| 30S ribosomal protein S18 [Ralstonia eutropha JMP134]
gi|123773854|sp|Q46P61|RS182_RALEJ RecName: Full=30S ribosomal protein S18 2
gi|72122887|gb|AAZ65073.1| SSU ribosomal protein S18P [Ralstonia eutropha JMP134]
Length = 92
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L AIKRAR
Sbjct: 20 LFKRKRYCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLNTAIKRAR 79
Query: 74 YLGLIAYVNL 83
+L L+ Y +L
Sbjct: 80 FLALLPYTDL 89
>gi|282891669|ref|ZP_06300156.1| hypothetical protein pah_c188o044 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281498459|gb|EFB40791.1| hypothetical protein pah_c188o044 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 85
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + +RK+CP + G IDYKD+ L++F+++RGKI+P RI+ VS Q+ LA+AIK
Sbjct: 12 RDQRARKRKTCPFTAAGITEIDYKDVSTLSKFITERGKILPRRITGVSAYHQKRLAEAIK 71
Query: 71 RARYLGLIAYV 81
RAR++ L+ +V
Sbjct: 72 RARHIALLPFV 82
>gi|253681270|ref|ZP_04862068.1| ribosomal protein S18 [Clostridium botulinum D str. 1873]
gi|331268206|ref|YP_004394698.1| 30S ribosomal protein S18 [Clostridium botulinum BKT015925]
gi|253562508|gb|EES91959.1| ribosomal protein S18 [Clostridium botulinum D str. 1873]
gi|329124756|gb|AEB74701.1| ribosomal protein S18 [Clostridium botulinum BKT015925]
Length = 78
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ L +F+++RGKI+P RIS K QREL AIKRAR + L+
Sbjct: 15 VCAFCADKSSFIDYKDVNKLRKFVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLP 74
Query: 80 YVN 82
+
Sbjct: 75 FTT 77
>gi|50085516|ref|YP_047026.1| 30S ribosomal protein S18 [Acinetobacter sp. ADP1]
gi|255319499|ref|ZP_05360713.1| ribosomal protein S18 [Acinetobacter radioresistens SK82]
gi|262378477|ref|ZP_06071634.1| ribosomal protein S18 [Acinetobacter radioresistens SH164]
gi|59798698|sp|Q6F9Q9|RS18_ACIAD RecName: Full=30S ribosomal protein S18
gi|49531492|emb|CAG69204.1| 30S ribosomal protein S18 [Acinetobacter sp. ADP1]
gi|255303439|gb|EET82642.1| ribosomal protein S18 [Acinetobacter radioresistens SK82]
gi|262299762|gb|EEY87674.1| ribosomal protein S18 [Acinetobacter radioresistens SH164]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LI Y +
Sbjct: 63 RYLALIPYTD 72
>gi|94677019|ref|YP_589000.1| ribosomal protein S18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|122988100|sp|Q1LSR4|RS18_BAUCH RecName: Full=30S ribosomal protein S18
gi|94220169|gb|ABF14328.1| ribosomal protein S18 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 75
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEDVIEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVNL 83
RYL L+ Y +L
Sbjct: 63 RYLSLLPYTDL 73
>gi|71906857|ref|YP_284444.1| SSU ribosomal protein S18P [Dechloromonas aromatica RCB]
gi|71846478|gb|AAZ45974.1| SSU ribosomal protein S18P [Dechloromonas aromatica RCB]
Length = 91
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + + +IDYKD+ +L F+ + KI+P+R++ QR+L AIKRAR
Sbjct: 20 LFKRRKFCRFTAEKVEQIDYKDVDVLKEFIQENAKIMPARLTGTKAGYQRQLGTAIKRAR 79
Query: 74 YLGLIAYVN 82
++ L+ Y +
Sbjct: 80 FMALLPYTD 88
>gi|209520395|ref|ZP_03269158.1| ribosomal protein S18 [Burkholderia sp. H160]
gi|295676424|ref|YP_003604948.1| ribosomal protein S18 [Burkholderia sp. CCGE1002]
gi|209499180|gb|EDZ99272.1| ribosomal protein S18 [Burkholderia sp. H160]
gi|295436267|gb|ADG15437.1| ribosomal protein S18 [Burkholderia sp. CCGE1002]
Length = 91
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G IDYKDI L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKAHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALMPYTD 87
>gi|15901383|ref|NP_345987.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TIGR4]
gi|15903437|ref|NP_358987.1| 30S ribosomal protein S18 [Streptococcus pneumoniae R6]
gi|24380218|ref|NP_722173.1| 30S ribosomal protein S18 [Streptococcus mutans UA159]
gi|111658382|ref|ZP_01409069.1| hypothetical protein SpneT_02000461 [Streptococcus pneumoniae
TIGR4]
gi|116516750|ref|YP_816828.1| 30S ribosomal protein S18 [Streptococcus pneumoniae D39]
gi|125717306|ref|YP_001034439.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK36]
gi|148984887|ref|ZP_01818140.1| hypothetical protein CGSSp3BS71_09631 [Streptococcus pneumoniae
SP3-BS71]
gi|148988585|ref|ZP_01820018.1| hypothetical protein CGSSp6BS73_08674 [Streptococcus pneumoniae
SP6-BS73]
gi|148992571|ref|ZP_01822239.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP9-BS68]
gi|148997397|ref|ZP_01825002.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP11-BS70]
gi|149003239|ref|ZP_01828135.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP14-BS69]
gi|149007548|ref|ZP_01831183.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP18-BS74]
gi|149011777|ref|ZP_01832973.1| hypothetical protein CGSSp19BS75_07412 [Streptococcus pneumoniae
SP19-BS75]
gi|149021813|ref|ZP_01835820.1| hypothetical protein CGSSp23BS72_09623 [Streptococcus pneumoniae
SP23-BS72]
gi|157150434|ref|YP_001451145.1| 30S ribosomal protein S18 [Streptococcus gordonii str. Challis
substr. CH1]
gi|168484972|ref|ZP_02709917.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1873-00]
gi|168487509|ref|ZP_02712017.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1087-00]
gi|168488799|ref|ZP_02712998.1| ribosomal protein S18 [Streptococcus pneumoniae SP195]
gi|168491569|ref|ZP_02715712.1| ribosomal protein S18 [Streptococcus pneumoniae CDC0288-04]
gi|168493440|ref|ZP_02717583.1| ribosomal protein S18 [Streptococcus pneumoniae CDC3059-06]
gi|168575265|ref|ZP_02721228.1| ribosomal protein S18 [Streptococcus pneumoniae MLV-016]
gi|169832520|ref|YP_001694944.1| 30S ribosomal protein S18 [Streptococcus pneumoniae Hungary19A-6]
gi|171779262|ref|ZP_02920233.1| hypothetical protein STRINF_01110 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|182684495|ref|YP_001836242.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CGSP14]
gi|221232250|ref|YP_002511403.1| 30S ribosomal protein S18 [Streptococcus pneumoniae ATCC 700669]
gi|225854979|ref|YP_002736491.1| 30S ribosomal protein S18 [Streptococcus pneumoniae JJA]
gi|225857165|ref|YP_002738676.1| 30S ribosomal protein S18 [Streptococcus pneumoniae P1031]
gi|225859294|ref|YP_002740804.1| 30S ribosomal protein S18 [Streptococcus pneumoniae 70585]
gi|225861370|ref|YP_002742879.1| 30S ribosomal protein S18 [Streptococcus pneumoniae Taiwan19F-14]
gi|237650221|ref|ZP_04524473.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CCRI 1974]
gi|237820896|ref|ZP_04596741.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CCRI 1974M2]
gi|262283523|ref|ZP_06061289.1| ribosomal protein S18 [Streptococcus sp. 2_1_36FAA]
gi|270292432|ref|ZP_06198643.1| ribosomal protein S18 [Streptococcus sp. M143]
gi|288906099|ref|YP_003431321.1| ribosomal protein S18 [Streptococcus gallolyticus UCN34]
gi|289168354|ref|YP_003446623.1| 30S ribosomal protein S18 [Streptococcus mitis B6]
gi|290579807|ref|YP_003484199.1| 30S ribosomal protein S18 [Streptococcus mutans NN2025]
gi|293365826|ref|ZP_06612531.1| 30S ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|296875865|ref|ZP_06899926.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC
15912]
gi|298230728|ref|ZP_06964409.1| 30S ribosomal protein S18 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254951|ref|ZP_06978537.1| 30S ribosomal protein S18 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503275|ref|YP_003725215.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TCH8431/19A]
gi|303255325|ref|ZP_07341395.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS455]
gi|303260166|ref|ZP_07346138.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP-BS293]
gi|303262556|ref|ZP_07348497.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP14-BS292]
gi|303264958|ref|ZP_07350873.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS397]
gi|303266421|ref|ZP_07352309.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS457]
gi|303269403|ref|ZP_07355173.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS458]
gi|306824869|ref|ZP_07458213.1| 30S ribosomal protein S18 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306829849|ref|ZP_07463036.1| 30S ribosomal protein S18 [Streptococcus mitis ATCC 6249]
gi|306832138|ref|ZP_07465292.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834252|ref|ZP_07467371.1| 30S ribosomal protein S18 [Streptococcus bovis ATCC 700338]
gi|307068183|ref|YP_003877149.1| hypothetical protein SPAP_1561 [Streptococcus pneumoniae AP200]
gi|307127747|ref|YP_003879778.1| 30S ribosomal protein S18 [Streptococcus pneumoniae 670-6B]
gi|307703305|ref|ZP_07640250.1| ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|307704416|ref|ZP_07641328.1| ribosomal protein S18 [Streptococcus mitis SK597]
gi|307705993|ref|ZP_07642816.1| ribosomal protein S18 [Streptococcus mitis SK564]
gi|307706202|ref|ZP_07643019.1| ribosomal protein S18 [Streptococcus mitis SK321]
gi|307708378|ref|ZP_07644845.1| ribosomal protein S18 [Streptococcus mitis NCTC 12261]
gi|309798591|ref|ZP_07692866.1| ribosomal protein S18 [Streptococcus infantis SK1302]
gi|312864919|ref|ZP_07725149.1| ribosomal protein S18 [Streptococcus downei F0415]
gi|312868477|ref|ZP_07728677.1| ribosomal protein S18 [Streptococcus parasanguinis F0405]
gi|315222303|ref|ZP_07864209.1| ribosomal protein S18 [Streptococcus anginosus F0211]
gi|315613509|ref|ZP_07888416.1| 30S ribosomal protein S18 [Streptococcus sanguinis ATCC 49296]
gi|319939919|ref|ZP_08014274.1| 30S ribosomal protein S18 [Streptococcus anginosus 1_2_62CV]
gi|319946353|ref|ZP_08020591.1| 30S ribosomal protein S18 [Streptococcus australis ATCC 700641]
gi|320547485|ref|ZP_08041771.1| 30S ribosomal protein S18 [Streptococcus equinus ATCC 9812]
gi|322373706|ref|ZP_08048242.1| ribosomal protein S18 [Streptococcus sp. C150]
gi|322375590|ref|ZP_08050102.1| ribosomal protein S18 [Streptococcus sp. C300]
gi|322377026|ref|ZP_08051519.1| ribosomal protein S18 [Streptococcus sp. M334]
gi|322386752|ref|ZP_08060376.1| 30S ribosomal protein S18 [Streptococcus cristatus ATCC 51100]
gi|322387422|ref|ZP_08061032.1| 30S ribosomal protein S18 [Streptococcus infantis ATCC 700779]
gi|322390175|ref|ZP_08063707.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC 903]
gi|322391659|ref|ZP_08065127.1| 30S ribosomal protein S18 [Streptococcus peroris ATCC 700780]
gi|323353389|ref|ZP_08087922.1| 30S ribosomal protein S18 [Streptococcus sanguinis VMC66]
gi|331266016|ref|YP_004325646.1| 30S ribosomal protein S18 [Streptococcus oralis Uo5]
gi|54039416|sp|P66473|RS18_STRR6 RecName: Full=30S ribosomal protein S18
gi|54039417|sp|P66474|RS18_STRMU RecName: Full=30S ribosomal protein S18
gi|54042150|sp|P66472|RS18_STRPN RecName: Full=30S ribosomal protein S18
gi|122278326|sp|Q04JL0|RS18_STRP2 RecName: Full=30S ribosomal protein S18
gi|166222248|sp|A3CL34|RS18_STRSV RecName: Full=30S ribosomal protein S18
gi|189029694|sp|A8AZD5|RS18_STRGC RecName: Full=30S ribosomal protein S18
gi|229560071|sp|B1ICV9|RS18_STRPI RecName: Full=30S ribosomal protein S18
gi|229560072|sp|B2IR58|RS18_STRPS RecName: Full=30S ribosomal protein S18
gi|254812957|sp|C1C8C8|RS18_STRP7 RecName: Full=30S ribosomal protein S18
gi|254812958|sp|B8ZLD9|RS18_STRPJ RecName: Full=30S ribosomal protein S18
gi|254812960|sp|C1CFC0|RS18_STRZJ RecName: Full=30S ribosomal protein S18
gi|254812961|sp|C1CLN8|RS18_STRZP RecName: Full=30S ribosomal protein S18
gi|254812962|sp|C1CSF7|RS18_STRZT RecName: Full=30S ribosomal protein S18
gi|24378225|gb|AAN59479.1|AE015012_8 30S ribosomal protein S18 [Streptococcus mutans UA159]
gi|14973029|gb|AAK75627.1| ribosomal protein S18 [Streptococcus pneumoniae TIGR4]
gi|15459045|gb|AAL00198.1| 30S Ribosomal protein S18 [Streptococcus pneumoniae R6]
gi|116077326|gb|ABJ55046.1| ribosomal protein S18 [Streptococcus pneumoniae D39]
gi|125497223|gb|ABN43889.1| 30S ribosomal protein S18, putative [Streptococcus sanguinis
SK36]
gi|147756452|gb|EDK63493.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP11-BS70]
gi|147758699|gb|EDK65696.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP14-BS69]
gi|147760907|gb|EDK67877.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP18-BS74]
gi|147764208|gb|EDK71140.1| hypothetical protein CGSSp19BS75_07412 [Streptococcus pneumoniae
SP19-BS75]
gi|147922909|gb|EDK74025.1| hypothetical protein CGSSp3BS71_09631 [Streptococcus pneumoniae
SP3-BS71]
gi|147925786|gb|EDK76861.1| hypothetical protein CGSSp6BS73_08674 [Streptococcus pneumoniae
SP6-BS73]
gi|147928588|gb|EDK79602.1| 30S ribosomal protein S18, putative [Streptococcus pneumoniae
SP9-BS68]
gi|147930049|gb|EDK81036.1| hypothetical protein CGSSp23BS72_09623 [Streptococcus pneumoniae
SP23-BS72]
gi|157075228|gb|ABV09911.1| ribosomal protein S18 [Streptococcus gordonii str. Challis
substr. CH1]
gi|168995022|gb|ACA35634.1| ribosomal protein S18 [Streptococcus pneumoniae Hungary19A-6]
gi|171282318|gb|EDT47745.1| hypothetical protein STRINF_01110 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|172041899|gb|EDT49945.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1873-00]
gi|182629829|gb|ACB90777.1| 30S ribosomal protein S18 [Streptococcus pneumoniae CGSP14]
gi|183569672|gb|EDT90200.1| ribosomal protein S18 [Streptococcus pneumoniae CDC1087-00]
gi|183572611|gb|EDT93139.1| ribosomal protein S18 [Streptococcus pneumoniae SP195]
gi|183574282|gb|EDT94810.1| ribosomal protein S18 [Streptococcus pneumoniae CDC0288-04]
gi|183576411|gb|EDT96939.1| ribosomal protein S18 [Streptococcus pneumoniae CDC3059-06]
gi|183578889|gb|EDT99417.1| ribosomal protein S18 [Streptococcus pneumoniae MLV-016]
gi|220674711|emb|CAR69284.1| 30S ribosomal protein S18 [Streptococcus pneumoniae ATCC 700669]
gi|225721900|gb|ACO17754.1| ribosomal protein S18 [Streptococcus pneumoniae 70585]
gi|225723663|gb|ACO19516.1| ribosomal protein S18 [Streptococcus pneumoniae JJA]
gi|225724494|gb|ACO20346.1| ribosomal protein S18 [Streptococcus pneumoniae P1031]
gi|225728310|gb|ACO24161.1| ribosomal protein S18 [Streptococcus pneumoniae Taiwan19F-14]
gi|254996706|dbj|BAH87307.1| 30S ribosomal protein S18 [Streptococcus mutans NN2025]
gi|262261014|gb|EEY79714.1| ribosomal protein S18 [Streptococcus sp. 2_1_36FAA]
gi|270278411|gb|EFA24257.1| ribosomal protein S18 [Streptococcus sp. M143]
gi|288732825|emb|CBI14401.1| ribosomal protein S18 [Streptococcus gallolyticus UCN34]
gi|288907921|emb|CBJ22761.1| 30S ribosomal protein S18 [Streptococcus mitis B6]
gi|291315650|gb|EFE56098.1| 30S ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|296433106|gb|EFH18892.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC
15912]
gi|298238870|gb|ADI70001.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TCH8431/19A]
gi|301794548|emb|CBW36992.1| 30S ribosomal protein S18 [Streptococcus pneumoniae INV104]
gi|301800372|emb|CBW33003.1| 30S ribosomal protein S18 [Streptococcus pneumoniae OXC141]
gi|301802257|emb|CBW35009.1| 30S ribosomal protein S18 [Streptococcus pneumoniae INV200]
gi|302597693|gb|EFL64769.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS455]
gi|302636273|gb|EFL66767.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP14-BS292]
gi|302638663|gb|EFL69126.1| 30S ribosomal protein S18 [Streptococcus pneumoniae SP-BS293]
gi|302641071|gb|EFL71448.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS458]
gi|302643999|gb|EFL74258.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS457]
gi|302645477|gb|EFL75709.1| 30S ribosomal protein S18 [Streptococcus pneumoniae BS397]
gi|304423601|gb|EFM26748.1| 30S ribosomal protein S18 [Streptococcus bovis ATCC 700338]
gi|304425577|gb|EFM28695.1| 30S ribosomal protein S18 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427860|gb|EFM30953.1| 30S ribosomal protein S18 [Streptococcus mitis ATCC 6249]
gi|304433080|gb|EFM36052.1| 30S ribosomal protein S18 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306409720|gb|ADM85147.1| hypothetical protein SPAP_1561 [Streptococcus pneumoniae AP200]
gi|306484809|gb|ADM91678.1| ribosomal protein S18 [Streptococcus pneumoniae 670-6B]
gi|307615824|gb|EFN95030.1| ribosomal protein S18 [Streptococcus mitis NCTC 12261]
gi|307618392|gb|EFN97542.1| ribosomal protein S18 [Streptococcus mitis SK321]
gi|307620412|gb|EFN99525.1| ribosomal protein S18 [Streptococcus mitis SK564]
gi|307622029|gb|EFO01054.1| ribosomal protein S18 [Streptococcus mitis SK597]
gi|307623171|gb|EFO02163.1| ribosomal protein S18 [Streptococcus oralis ATCC 35037]
gi|308117827|gb|EFO55228.1| ribosomal protein S18 [Streptococcus infantis SK1302]
gi|311096222|gb|EFQ54466.1| ribosomal protein S18 [Streptococcus parasanguinis F0405]
gi|311099539|gb|EFQ57753.1| ribosomal protein S18 [Streptococcus downei F0415]
gi|315188636|gb|EFU22345.1| ribosomal protein S18 [Streptococcus anginosus F0211]
gi|315314200|gb|EFU62245.1| 30S ribosomal protein S18 [Streptococcus sanguinis ATCC 49296]
gi|319747506|gb|EFV99761.1| 30S ribosomal protein S18 [Streptococcus australis ATCC 700641]
gi|319810930|gb|EFW07249.1| 30S ribosomal protein S18 [Streptococcus anginosus 1_2_62CV]
gi|320447830|gb|EFW88587.1| 30S ribosomal protein S18 [Streptococcus equinus ATCC 9812]
gi|321141951|gb|EFX37446.1| 30S ribosomal protein S18 [Streptococcus infantis ATCC 700779]
gi|321143135|gb|EFX38581.1| 30S ribosomal protein S18 [Streptococcus parasanguinis ATCC 903]
gi|321145470|gb|EFX40863.1| 30S ribosomal protein S18 [Streptococcus peroris ATCC 700780]
gi|321269034|gb|EFX51970.1| 30S ribosomal protein S18 [Streptococcus cristatus ATCC 51100]
gi|321278748|gb|EFX55817.1| ribosomal protein S18 [Streptococcus sp. C150]
gi|321279298|gb|EFX56339.1| ribosomal protein S18 [Streptococcus sp. C300]
gi|321282833|gb|EFX59840.1| ribosomal protein S18 [Streptococcus sp. M334]
gi|322121335|gb|EFX93098.1| 30S ribosomal protein S18 [Streptococcus sanguinis VMC66]
gi|324990242|gb|EGC22180.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK353]
gi|324992066|gb|EGC23988.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK405]
gi|324994159|gb|EGC26073.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK678]
gi|325688012|gb|EGD30031.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK72]
gi|325690403|gb|EGD32407.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK115]
gi|325693669|gb|EGD35588.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK150]
gi|325697625|gb|EGD39510.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK160]
gi|326682688|emb|CBZ00305.1| 30S ribosomal protein S18 [Streptococcus oralis Uo5]
gi|327389725|gb|EGE88070.1| ribosomal protein S18 [Streptococcus pneumoniae GA04375]
gi|327458971|gb|EGF05319.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1057]
gi|327459368|gb|EGF05714.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1]
gi|327469240|gb|EGF14712.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK330]
gi|327472789|gb|EGF18216.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK408]
gi|327490584|gb|EGF22365.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1058]
gi|328945789|gb|EGG39940.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1087]
gi|332072332|gb|EGI82815.1| ribosomal protein S18 [Streptococcus pneumoniae GA17570]
gi|332073877|gb|EGI84355.1| ribosomal protein S18 [Streptococcus pneumoniae GA41301]
gi|332074294|gb|EGI84771.1| ribosomal protein S18 [Streptococcus pneumoniae GA17545]
gi|332199584|gb|EGJ13659.1| ribosomal protein S18 [Streptococcus pneumoniae GA41317]
gi|332200101|gb|EGJ14174.1| ribosomal protein S18 [Streptococcus pneumoniae GA47368]
gi|332200980|gb|EGJ15051.1| ribosomal protein S18 [Streptococcus pneumoniae GA47901]
gi|332357976|gb|EGJ35809.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1056]
gi|332363248|gb|EGJ41033.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK49]
gi|332363798|gb|EGJ41577.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK355]
gi|332364668|gb|EGJ42437.1| 30S ribosomal protein S18 [Streptococcus sanguinis SK1059]
Length = 79
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ +VN
Sbjct: 66 RARVMALMPFVN 77
>gi|17987764|ref|NP_540398.1| 30S ribosomal protein S18 [Brucella melitensis bv. 1 str. 16M]
gi|23501355|ref|NP_697482.1| 30S ribosomal protein S18 [Brucella suis 1330]
gi|62289439|ref|YP_221232.1| 30S ribosomal protein S18 [Brucella abortus bv. 1 str. 9-941]
gi|82699365|ref|YP_413939.1| 30S ribosomal protein S18 [Brucella melitensis biovar Abortus
2308]
gi|148560401|ref|YP_001258473.1| 30S ribosomal protein S18 [Brucella ovis ATCC 25840]
gi|161618425|ref|YP_001592312.1| 30S ribosomal protein S18 [Brucella canis ATCC 23365]
gi|189023689|ref|YP_001934457.1| 30S ribosomal protein S18 [Brucella abortus S19]
gi|225626962|ref|ZP_03785001.1| ribosomal protein S18 [Brucella ceti str. Cudo]
gi|225851990|ref|YP_002732223.1| 30S ribosomal protein S18 [Brucella melitensis ATCC 23457]
gi|237814927|ref|ZP_04593925.1| ribosomal protein S18 [Brucella abortus str. 2308 A]
gi|254688751|ref|ZP_05152005.1| 30S ribosomal protein S18 [Brucella abortus bv. 6 str. 870]
gi|254693234|ref|ZP_05155062.1| 30S ribosomal protein S18 [Brucella abortus bv. 3 str. Tulya]
gi|254696880|ref|ZP_05158708.1| 30S ribosomal protein S18 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701258|ref|ZP_05163086.1| 30S ribosomal protein S18 [Brucella suis bv. 5 str. 513]
gi|254703805|ref|ZP_05165633.1| 30S ribosomal protein S18 [Brucella suis bv. 3 str. 686]
gi|254707817|ref|ZP_05169645.1| 30S ribosomal protein S18 [Brucella pinnipedialis M163/99/10]
gi|254709601|ref|ZP_05171412.1| 30S ribosomal protein S18 [Brucella pinnipedialis B2/94]
gi|254712983|ref|ZP_05174794.1| 30S ribosomal protein S18 [Brucella ceti M644/93/1]
gi|254716663|ref|ZP_05178474.1| 30S ribosomal protein S18 [Brucella ceti M13/05/1]
gi|254718630|ref|ZP_05180441.1| 30S ribosomal protein S18 [Brucella sp. 83/13]
gi|254729784|ref|ZP_05188362.1| 30S ribosomal protein S18 [Brucella abortus bv. 4 str. 292]
gi|256031093|ref|ZP_05444707.1| 30S ribosomal protein S18 [Brucella pinnipedialis M292/94/1]
gi|256044170|ref|ZP_05447077.1| 30S ribosomal protein S18 [Brucella melitensis bv. 1 str. Rev.1]
gi|256060587|ref|ZP_05450755.1| 30S ribosomal protein S18 [Brucella neotomae 5K33]
gi|256112978|ref|ZP_05453881.1| 30S ribosomal protein S18 [Brucella melitensis bv. 3 str. Ether]
gi|256159166|ref|ZP_05456979.1| 30S ribosomal protein S18 [Brucella ceti M490/95/1]
gi|256254496|ref|ZP_05460032.1| 30S ribosomal protein S18 [Brucella ceti B1/94]
gi|256256998|ref|ZP_05462534.1| 30S ribosomal protein S18 [Brucella abortus bv. 9 str. C68]
gi|256264503|ref|ZP_05467035.1| predicted protein [Brucella melitensis bv. 2 str. 63/9]
gi|256368907|ref|YP_003106413.1| 30S ribosomal protein S18 [Brucella microti CCM 4915]
gi|260168224|ref|ZP_05755035.1| 30S ribosomal protein S18 [Brucella sp. F5/99]
gi|260545810|ref|ZP_05821551.1| predicted protein [Brucella abortus NCTC 8038]
gi|260563528|ref|ZP_05834014.1| predicted protein [Brucella melitensis bv. 1 str. 16M]
gi|260566942|ref|ZP_05837412.1| predicted protein [Brucella suis bv. 4 str. 40]
gi|260754230|ref|ZP_05866578.1| SSU ribosomal protein S18P [Brucella abortus bv. 6 str. 870]
gi|260757450|ref|ZP_05869798.1| SSU ribosomal protein S18P [Brucella abortus bv. 4 str. 292]
gi|260761275|ref|ZP_05873618.1| SSU ribosomal protein S18P [Brucella abortus bv. 2 str. 86/8/59]
gi|260883256|ref|ZP_05894870.1| SSU ribosomal protein S18P [Brucella abortus bv. 9 str. C68]
gi|261213477|ref|ZP_05927758.1| SSU ribosomal protein S18P [Brucella abortus bv. 3 str. Tulya]
gi|261218464|ref|ZP_05932745.1| SSU ribosomal protein S18P [Brucella ceti M13/05/1]
gi|261221670|ref|ZP_05935951.1| SSU ribosomal protein S18P [Brucella ceti B1/94]
gi|261315304|ref|ZP_05954501.1| SSU ribosomal protein S18P [Brucella pinnipedialis M163/99/10]
gi|261317129|ref|ZP_05956326.1| SSU ribosomal protein S18P [Brucella pinnipedialis B2/94]
gi|261320686|ref|ZP_05959883.1| SSU ribosomal protein S18P [Brucella ceti M644/93/1]
gi|261324583|ref|ZP_05963780.1| SSU ribosomal protein S18P [Brucella neotomae 5K33]
gi|261751797|ref|ZP_05995506.1| SSU ribosomal protein S18P [Brucella suis bv. 5 str. 513]
gi|261754452|ref|ZP_05998161.1| SSU ribosomal protein S18P [Brucella suis bv. 3 str. 686]
gi|261757685|ref|ZP_06001394.1| predicted protein [Brucella sp. F5/99]
gi|265983609|ref|ZP_06096344.1| SSU ribosomal protein S18P [Brucella sp. 83/13]
gi|265988167|ref|ZP_06100724.1| SSU ribosomal protein S18P [Brucella pinnipedialis M292/94/1]
gi|265990583|ref|ZP_06103140.1| SSU ribosomal protein S18P [Brucella melitensis bv. 1 str. Rev.1]
gi|265994413|ref|ZP_06106970.1| SSU ribosomal protein S18P [Brucella melitensis bv. 3 str. Ether]
gi|265997633|ref|ZP_06110190.1| SSU ribosomal protein S18P [Brucella ceti M490/95/1]
gi|297247851|ref|ZP_06931569.1| 30S ribosomal protein S18 [Brucella abortus bv. 5 str. B3196]
gi|306839850|ref|ZP_07472648.1| ribosomal protein S18 [Brucella sp. NF 2653]
gi|306842261|ref|ZP_07474924.1| ribosomal protein S18 [Brucella sp. BO2]
gi|306845083|ref|ZP_07477663.1| ribosomal protein S18 [Brucella sp. BO1]
gi|54039409|sp|P66454|RS18_BRUSU RecName: Full=30S ribosomal protein S18
gi|54042144|sp|P66453|RS18_BRUME RecName: Full=30S ribosomal protein S18
gi|75505331|sp|Q57ER3|RS18_BRUAB RecName: Full=30S ribosomal protein S18
gi|123740899|sp|Q2YMH0|RS18_BRUA2 RecName: Full=30S ribosomal protein S18
gi|166220928|sp|A5VP26|RS18_BRUO2 RecName: Full=30S ribosomal protein S18
gi|189029650|sp|A9M8X7|RS18_BRUC2 RecName: Full=30S ribosomal protein S18
gi|229559967|sp|B2S9V3|RS18_BRUA1 RecName: Full=30S ribosomal protein S18
gi|254765414|sp|C0RHG1|RS18_BRUMB RecName: Full=30S ribosomal protein S18
gi|17983486|gb|AAL52662.1| ssu ribosomal protein s18p [Brucella melitensis bv. 1 str. 16M]
gi|23347248|gb|AAN29397.1| ribosomal protein S18 [Brucella suis 1330]
gi|62195571|gb|AAX73871.1| RpsR, ribosomal protein s18 [Brucella abortus bv. 1 str. 9-941]
gi|82615466|emb|CAJ10435.1| Ribosomal protein S18 [Brucella melitensis biovar Abortus 2308]
gi|148371658|gb|ABQ61637.1| ribosomal protein S18 [Brucella ovis ATCC 25840]
gi|161335236|gb|ABX61541.1| ribosomal protein S18 [Brucella canis ATCC 23365]
gi|189019261|gb|ACD71983.1| Ribosomal protein S18 [Brucella abortus S19]
gi|225618619|gb|EEH15662.1| ribosomal protein S18 [Brucella ceti str. Cudo]
gi|225640355|gb|ACO00269.1| ribosomal protein S18 [Brucella melitensis ATCC 23457]
gi|237789764|gb|EEP63974.1| ribosomal protein S18 [Brucella abortus str. 2308 A]
gi|255999065|gb|ACU47464.1| 30S ribosomal protein S18 [Brucella microti CCM 4915]
gi|260097217|gb|EEW81092.1| predicted protein [Brucella abortus NCTC 8038]
gi|260153544|gb|EEW88636.1| predicted protein [Brucella melitensis bv. 1 str. 16M]
gi|260156460|gb|EEW91540.1| predicted protein [Brucella suis bv. 4 str. 40]
gi|260667768|gb|EEX54708.1| SSU ribosomal protein S18P [Brucella abortus bv. 4 str. 292]
gi|260671707|gb|EEX58528.1| SSU ribosomal protein S18P [Brucella abortus bv. 2 str. 86/8/59]
gi|260674338|gb|EEX61159.1| SSU ribosomal protein S18P [Brucella abortus bv. 6 str. 870]
gi|260872784|gb|EEX79853.1| SSU ribosomal protein S18P [Brucella abortus bv. 9 str. C68]
gi|260915084|gb|EEX81945.1| SSU ribosomal protein S18P [Brucella abortus bv. 3 str. Tulya]
gi|260920254|gb|EEX86907.1| SSU ribosomal protein S18P [Brucella ceti B1/94]
gi|260923553|gb|EEX90121.1| SSU ribosomal protein S18P [Brucella ceti M13/05/1]
gi|261293376|gb|EEX96872.1| SSU ribosomal protein S18P [Brucella ceti M644/93/1]
gi|261296352|gb|EEX99848.1| SSU ribosomal protein S18P [Brucella pinnipedialis B2/94]
gi|261300563|gb|EEY04060.1| SSU ribosomal protein S18P [Brucella neotomae 5K33]
gi|261304330|gb|EEY07827.1| SSU ribosomal protein S18P [Brucella pinnipedialis M163/99/10]
gi|261737669|gb|EEY25665.1| predicted protein [Brucella sp. F5/99]
gi|261741550|gb|EEY29476.1| SSU ribosomal protein S18P [Brucella suis bv. 5 str. 513]
gi|261744205|gb|EEY32131.1| SSU ribosomal protein S18P [Brucella suis bv. 3 str. 686]
gi|262552101|gb|EEZ08091.1| SSU ribosomal protein S18P [Brucella ceti M490/95/1]
gi|262765526|gb|EEZ11315.1| SSU ribosomal protein S18P [Brucella melitensis bv. 3 str. Ether]
gi|263001367|gb|EEZ13942.1| SSU ribosomal protein S18P [Brucella melitensis bv. 1 str. Rev.1]
gi|263094836|gb|EEZ18574.1| predicted protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660364|gb|EEZ30625.1| SSU ribosomal protein S18P [Brucella pinnipedialis M292/94/1]
gi|264662201|gb|EEZ32462.1| SSU ribosomal protein S18P [Brucella sp. 83/13]
gi|297175020|gb|EFH34367.1| 30S ribosomal protein S18 [Brucella abortus bv. 5 str. B3196]
gi|306274498|gb|EFM56293.1| ribosomal protein S18 [Brucella sp. BO1]
gi|306287641|gb|EFM59088.1| ribosomal protein S18 [Brucella sp. BO2]
gi|306405036|gb|EFM61317.1| ribosomal protein S18 [Brucella sp. NF 2653]
gi|326408486|gb|ADZ65551.1| Ribosomal protein S18 [Brucella melitensis M28]
gi|326538202|gb|ADZ86417.1| ribosomal protein S18 [Brucella melitensis M5-90]
Length = 82
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|328954270|ref|YP_004371604.1| 30S ribosomal protein S18 [Desulfobacca acetoxidans DSM 11109]
gi|328454594|gb|AEB10423.1| 30S ribosomal protein S18 [Desulfobacca acetoxidans DSM 11109]
Length = 85
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + HRRK C ID+KD+ L F+++RGKI+P RIS + QR++ AIK
Sbjct: 9 RRPIFHRRKVCRFCVDSKLVIDHKDVNTLRHFITERGKIIPRRISGNCARHQRKVTLAIK 68
Query: 71 RARYLGLIAY 80
RAR+L L+ Y
Sbjct: 69 RARHLALMPY 78
>gi|289579513|ref|YP_003478140.1| ribosomal protein S18 [Thermoanaerobacter italicus Ab9]
gi|289529226|gb|ADD03578.1| ribosomal protein S18 [Thermoanaerobacter italicus Ab9]
Length = 89
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +IDYKD+ L +++++RGKI+P RI+ + QR+L +AIKRAR + L+
Sbjct: 26 VCAFCTDNIDKIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTRAIKRARQIALLP 85
Query: 80 YV 81
Y
Sbjct: 86 YT 87
>gi|153855507|ref|ZP_01996626.1| hypothetical protein DORLON_02640 [Dorea longicatena DSM 13814]
gi|149752029|gb|EDM61960.1| hypothetical protein DORLON_02640 [Dorea longicatena DSM 13814]
Length = 88
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C GK IDYKD L +++S+RGKI+P RI+ K QR L AIKRAR++ L+
Sbjct: 25 VCVFCGKENNEIDYKDTAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHIALMP 84
Query: 80 YV 81
YV
Sbjct: 85 YV 86
>gi|54778771|gb|AAV39605.1| ribosomal protein S18 [synthetic construct]
Length = 102
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 27 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 86
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 87 RYLSLLPYTD 96
>gi|332283720|ref|YP_004415631.1| 30S ribosomal protein S18 [Pusillimonas sp. T7-7]
gi|330427673|gb|AEC19007.1| 30S ribosomal protein S18 [Pusillimonas sp. T7-7]
Length = 90
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 15 QQNPLFKRRKFCRFTAANVDEIDYKDLDTLRDFIQENGKIIPARLTGTKAHYQRQLDTAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|311070629|ref|YP_003975552.1| 30S ribosomal protein S18 [Bacillus atrophaeus 1942]
gi|310871146|gb|ADP34621.1| 30S ribosomal protein S18 [Bacillus atrophaeus 1942]
Length = 79
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + G IDYKD+ LL +F+S+RGKI+P R++ + K QR+L AIK +R + L+
Sbjct: 15 VCYFTSNGITHIDYKDVDLLRKFVSERGKILPRRVTGTNAKYQRKLTAAIKLSRQMALLP 74
Query: 80 YVN 82
YV
Sbjct: 75 YVT 77
>gi|134295902|ref|YP_001119637.1| 30S ribosomal protein S18 [Burkholderia vietnamiensis G4]
gi|166220935|sp|A4JEU9|RS18_BURVG RecName: Full=30S ribosomal protein S18
gi|134139059|gb|ABO54802.1| SSU ribosomal protein S18P [Burkholderia vietnamiensis G4]
Length = 91
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 1 MAEVAPTPLLRR-----NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
MA +R + R+K C + G +IDYKD L F+ + GKI P+R++
Sbjct: 1 MARPTGKKFDKRRQQQNPLFKRKKFCRFTAAGVDQIDYKDTETLKDFIGENGKITPARLT 60
Query: 56 SVSHKKQRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR+L L+ Y +
Sbjct: 61 GTKAHYQRQLDTAIKRARFLALLPYTD 87
>gi|225011730|ref|ZP_03702168.1| ribosomal protein S18 [Flavobacteria bacterium MS024-2A]
gi|225004233|gb|EEG42205.1| ribosomal protein S18 [Flavobacteria bacterium MS024-2A]
Length = 98
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + S ++K C G +DYKD L +F++++GKI+P R++ S K QR+++ A+
Sbjct: 22 LNIDTSTQKKYCRFKRTGIKYVDYKDPDFLIKFVNEQGKILPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYV 93
>gi|319407054|emb|CBI80691.1| 30S ribosomal protein S18 [Bartonella sp. 1-1C]
Length = 82
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T +RR HRRK+CP SG AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 1 MTDIHQTS-VRRPFHHRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|260101870|ref|ZP_05752107.1| 30S ribosomal protein S18 [Lactobacillus helveticus DSM 20075]
gi|260084298|gb|EEW68418.1| 30S ribosomal protein S18 [Lactobacillus helveticus DSM 20075]
Length = 76
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ ++ RRK ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++A A
Sbjct: 1 MAQQRRGGRRKVDYIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANA 60
Query: 69 IKRARYLGLIAYV 81
IKRAR +GL+ +V
Sbjct: 61 IKRARIMGLLPFV 73
>gi|169830183|ref|YP_001700341.1| 30S ribosomal protein S18 [Lysinibacillus sphaericus C3-41]
gi|168994671|gb|ACA42211.1| 30S ribosomal protein S18 [Lysinibacillus sphaericus C3-41]
Length = 78
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK +R +GL+
Sbjct: 13 VCYFTANNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTSAIKVSRIMGLLP 72
Query: 80 YV 81
+V
Sbjct: 73 FV 74
>gi|330839912|ref|YP_004414492.1| 30S ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
gi|329747676|gb|AEC01033.1| 30S ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
Length = 77
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCTFCVDKVDVIDYKDVAKLRRFITERGKILPRRISGNCAKHQRQVTLAIKRARNIALL 72
Query: 79 AYV 81
+
Sbjct: 73 PFT 75
>gi|118594784|ref|ZP_01552131.1| 30S ribosomal protein S18 [Methylophilales bacterium HTCC2181]
gi|118440562|gb|EAV47189.1| 30S ribosomal protein S18 [Methylophilales bacterium HTCC2181]
Length = 75
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RR+ C S +G +DYKDI LL F+++ GK++P+RI+ K QR+L A+
Sbjct: 1 MAREMYKRRRYCRFSAEGIKEVDYKDIDLLKDFITENGKLIPARITGTKSKYQRQLGTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 61 KRARFLALLPYTD 73
>gi|88810600|ref|ZP_01125857.1| 30S ribosomal protein S18 [Nitrococcus mobilis Nb-231]
gi|88792230|gb|EAR23340.1| 30S ribosomal protein S18 [Nitrococcus mobilis Nb-231]
Length = 74
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA AIKRA
Sbjct: 3 RFFRRRKYCRFTAEGVREIDYKDLNTLKSYVTETGKIVPSRITGTRAKYQRQLASAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYTD 72
>gi|319404042|emb|CBI77630.1| 30S ribosomal protein S18 [Bartonella rochalimae ATCC BAA-1498]
Length = 83
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ T + RR HRRK+CP SG AP+IDYKDI+LL R++S+RGKI+PSRI++VS K
Sbjct: 2 MTDIQQTSI-RRPFHHRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIIPSRITAVSQK 60
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 61 KQRELANAIKRARFLGLLPYV 81
>gi|329913487|ref|ZP_08275956.1| SSU ribosomal protein S18p [Oxalobacteraceae bacterium IMCC9480]
gi|327545345|gb|EGF30580.1| SSU ribosomal protein S18p [Oxalobacteraceae bacterium IMCC9480]
Length = 96
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + R+K C + ++DYKD+ L F+ + GKI+P+R++ QR++ AI
Sbjct: 20 QQNPLFKRKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTRAHYQRQVDTAI 79
Query: 70 KRARYLGLIAYVNL 83
KRAR+L L+ Y +L
Sbjct: 80 KRARFLALLPYTDL 93
>gi|319943303|ref|ZP_08017586.1| 50S ribosomal protein L21 [Lautropia mirabilis ATCC 51599]
gi|319743845|gb|EFV96249.1| 50S ribosomal protein L21 [Lautropia mirabilis ATCC 51599]
Length = 91
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R+K C + + IDYKD+ L F++++GKI+P+R++ Q
Sbjct: 10 DRKPKRPAQSALFKRKKFCRFTAEKVEWIDYKDVDTLKDFVTEQGKIIPARLTGTRAHYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AI+RAR+L L+ Y +
Sbjct: 70 RQLGVAIRRARFLALMPYTD 89
>gi|313900367|ref|ZP_07833861.1| ribosomal protein S18 [Clostridium sp. HGF2]
gi|312954916|gb|EFR36590.1| ribosomal protein S18 [Clostridium sp. HGF2]
Length = 76
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKDI LL RF+S GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIESIDYKDIELLKRFISANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ YV+
Sbjct: 63 KRARQMALLPYVS 75
>gi|206889919|ref|YP_002248636.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741857|gb|ACI20914.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 77
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + IDYK+++LL F+++RGKI+ +++ K QREL KAIKRA
Sbjct: 7 RRFFRKKYCRFCAEKIDFIDYKNVKLLRGFMTERGKILSRKLTGTCSKHQRELTKAIKRA 66
Query: 73 RYLGLIAYVNL 83
R + L+ Y+ +
Sbjct: 67 RAVALLPYIEI 77
>gi|114762812|ref|ZP_01442244.1| 30S ribosomal protein S18 [Pelagibaca bermudensis HTCC2601]
gi|114544422|gb|EAU47429.1| 30S ribosomal protein S18 [Roseovarius sp. HTCC2601]
Length = 75
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 58/73 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAYV 81
IKRAR+L L+ YV
Sbjct: 61 IKRARFLALLPYV 73
>gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai]
gi|16132024|ref|NP_418623.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|16763210|ref|NP_458827.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|24115555|ref|NP_710065.1| 30S ribosomal protein S18 [Shigella flexneri 2a str. 301]
gi|26251099|ref|NP_757139.1| 30S ribosomal protein S18 [Escherichia coli CFT073]
gi|29144689|ref|NP_808031.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|30065573|ref|NP_839744.1| 30S ribosomal protein S18 [Shigella flexneri 2a str. 2457T]
gi|37528390|ref|NP_931735.1| 30S ribosomal protein S18 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|56416184|ref|YP_153259.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62182837|ref|YP_219254.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|74314683|ref|YP_313102.1| 30S ribosomal protein S18 [Shigella sonnei Ss046]
gi|82546556|ref|YP_410503.1| 30S ribosomal protein S18 [Shigella boydii Sb227]
gi|82779400|ref|YP_405749.1| 30S ribosomal protein S18 [Shigella dysenteriae Sd197]
gi|89110922|ref|AP_004702.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. W3110]
gi|91213751|ref|YP_543737.1| 30S ribosomal protein S18 [Escherichia coli UTI89]
gi|110644559|ref|YP_672289.1| 30S ribosomal protein S18 [Escherichia coli 536]
gi|110808116|ref|YP_691636.1| 30S ribosomal protein S18 [Shigella flexneri 5 str. 8401]
gi|146310038|ref|YP_001175112.1| 30S ribosomal protein S18 [Enterobacter sp. 638]
gi|152973068|ref|YP_001338214.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|156932423|ref|YP_001436339.1| 30S ribosomal protein S18 [Cronobacter sakazakii ATCC BAA-894]
gi|157147826|ref|YP_001455145.1| 30S ribosomal protein S18 [Citrobacter koseri ATCC BAA-895]
gi|157158640|ref|YP_001465702.1| 30S ribosomal protein S18 [Escherichia coli E24377A]
gi|157163667|ref|YP_001460985.1| 30S ribosomal protein S18 [Escherichia coli HS]
gi|161505105|ref|YP_001572217.1| 30S ribosomal protein S18 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|161617665|ref|YP_001591630.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168263253|ref|ZP_02685226.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168464722|ref|ZP_02698625.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168751446|ref|ZP_02776468.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4113]
gi|168754774|ref|ZP_02779781.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4401]
gi|168760445|ref|ZP_02785452.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4501]
gi|168766482|ref|ZP_02791489.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4486]
gi|168774085|ref|ZP_02799092.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4196]
gi|168780635|ref|ZP_02805642.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4076]
gi|168784840|ref|ZP_02809847.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC869]
gi|168801858|ref|ZP_02826865.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC508]
gi|170021788|ref|YP_001726742.1| 30S ribosomal protein S18 [Escherichia coli ATCC 8739]
gi|170083647|ref|YP_001732967.1| 30S ribosomal protein S18 [Escherichia coli str. K-12 substr.
DH10B]
gi|170680020|ref|YP_001746596.1| 30S ribosomal protein S18 [Escherichia coli SMS-3-5]
gi|170766627|ref|ZP_02901080.1| ribosomal protein S18 [Escherichia albertii TW07627]
gi|183600324|ref|ZP_02961817.1| hypothetical protein PROSTU_03885 [Providencia stuartii ATCC
25827]
gi|187732798|ref|YP_001882891.1| 30S ribosomal protein S18 [Shigella boydii CDC 3083-94]
gi|188495594|ref|ZP_03002864.1| ribosomal protein S18 [Escherichia coli 53638]
gi|188535071|ref|YP_001908868.1| 30S ribosomal protein S18 [Erwinia tasmaniensis Et1/99]
gi|191165620|ref|ZP_03027460.1| ribosomal protein S18 [Escherichia coli B7A]
gi|191170703|ref|ZP_03032255.1| ribosomal protein S18 [Escherichia coli F11]
gi|193065998|ref|ZP_03047056.1| ribosomal protein S18 [Escherichia coli E22]
gi|193070855|ref|ZP_03051787.1| ribosomal protein S18 [Escherichia coli E110019]
gi|194426593|ref|ZP_03059147.1| ribosomal protein S18 [Escherichia coli B171]
gi|194434584|ref|ZP_03066841.1| ribosomal protein S18 [Shigella dysenteriae 1012]
gi|194439537|ref|ZP_03071611.1| ribosomal protein S18 [Escherichia coli 101-1]
gi|194446807|ref|YP_002043646.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194449942|ref|YP_002048435.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472416|ref|ZP_03078400.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194734283|ref|YP_002117333.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195935992|ref|ZP_03081374.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. EC4024]
gi|197249759|ref|YP_002149307.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197261817|ref|ZP_03161891.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287188|ref|YP_002153060.1| 30S ribosomal protein S18 [Proteus mirabilis HI4320]
gi|197365107|ref|YP_002144744.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242690|ref|YP_002218274.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387853|ref|ZP_03214465.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927186|ref|ZP_03218388.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205355148|ref|YP_002228949.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206579628|ref|YP_002240847.1| ribosomal protein S18 [Klebsiella pneumoniae 342]
gi|207859538|ref|YP_002246189.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|208809011|ref|ZP_03251348.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4206]
gi|208814274|ref|ZP_03255603.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4045]
gi|208819004|ref|ZP_03259324.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4042]
gi|209400527|ref|YP_002273743.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4115]
gi|209921692|ref|YP_002295776.1| 30S ribosomal protein S18 [Escherichia coli SE11]
gi|212709964|ref|ZP_03318092.1| hypothetical protein PROVALCAL_01015 [Providencia alcalifaciens
DSM 30120]
gi|213028576|ref|ZP_03343023.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213161635|ref|ZP_03347345.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419166|ref|ZP_03352232.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213428641|ref|ZP_03361391.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213582064|ref|ZP_03363890.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213609732|ref|ZP_03369558.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213649001|ref|ZP_03379054.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213864943|ref|ZP_03387062.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|215489546|ref|YP_002331977.1| 30S ribosomal protein S18 [Escherichia coli O127:H6 str.
E2348/69]
gi|217326502|ref|ZP_03442586.1| ribosomal protein S18 [Escherichia coli O157:H7 str. TW14588]
gi|218551472|ref|YP_002385264.1| 30S ribosomal protein S18 [Escherichia fergusonii ATCC 35469]
gi|218556754|ref|YP_002389668.1| 30S ribosomal protein S18 [Escherichia coli IAI1]
gi|218561361|ref|YP_002394274.1| 30S ribosomal protein S18 [Escherichia coli S88]
gi|218692585|ref|YP_002400797.1| 30S ribosomal protein S18 [Escherichia coli ED1a]
gi|218697953|ref|YP_002405620.1| 30S ribosomal protein S18 [Escherichia coli 55989]
gi|218702898|ref|YP_002410527.1| 30S ribosomal protein S18 [Escherichia coli IAI39]
gi|218707813|ref|YP_002415332.1| 30S ribosomal protein S18 [Escherichia coli UMN026]
gi|224586232|ref|YP_002640031.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|226326632|ref|ZP_03802150.1| hypothetical protein PROPEN_00482 [Proteus penneri ATCC 35198]
gi|227357118|ref|ZP_03841487.1| 30S ribosomal protein S18 [Proteus mirabilis ATCC 29906]
gi|227886754|ref|ZP_04004559.1| 30S ribosomal protein S18 [Escherichia coli 83972]
gi|237703870|ref|ZP_04534351.1| 30S ribosomal subunit protein S18 [Escherichia sp. 3_2_53FAA]
gi|237729131|ref|ZP_04559612.1| 30S ribosomal protein S18 [Citrobacter sp. 30_2]
gi|238755922|ref|ZP_04617250.1| 30S ribosomal protein S18 [Yersinia ruckeri ATCC 29473]
gi|238892682|ref|YP_002917416.1| 30S ribosomal protein S18 [Klebsiella pneumoniae NTUH-K2044]
gi|238903309|ref|YP_002929105.1| 30S ribosomal subunit protein S18 [Escherichia coli BW2952]
gi|238910550|ref|ZP_04654387.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|238918385|ref|YP_002931899.1| 30S ribosomal protein S18 [Edwardsiella ictaluri 93-146]
gi|242238248|ref|YP_002986429.1| ribosomal protein S18 [Dickeya dadantii Ech703]
gi|251788413|ref|YP_003003134.1| 30S ribosomal protein S18 [Dickeya zeae Ech1591]
gi|253775173|ref|YP_003038004.1| 30S ribosomal protein S18 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253991543|ref|YP_003042899.1| 30S ribosomal protein S18 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|254037222|ref|ZP_04871299.1| ribosomal protein S18 [Escherichia sp. 1_1_43]
gi|254164131|ref|YP_003047239.1| 30S ribosomal protein S18 [Escherichia coli B str. REL606]
gi|254796221|ref|YP_003081058.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. TW14359]
gi|256019847|ref|ZP_05433712.1| 30S ribosomal protein S18 [Shigella sp. D9]
gi|256025137|ref|ZP_05439002.1| 30S ribosomal protein S18 [Escherichia sp. 4_1_40B]
gi|259907191|ref|YP_002647547.1| 30S ribosomal protein S18 [Erwinia pyrifoliae Ep1/96]
gi|260599460|ref|YP_003212031.1| 30S ribosomal protein S18 [Cronobacter turicensis z3032]
gi|260847031|ref|YP_003224809.1| 30S ribosomal subunit protein S18 [Escherichia coli O103:H2 str.
12009]
gi|260858354|ref|YP_003232245.1| 30S ribosomal subunit protein S18 [Escherichia coli O26:H11 str.
11368]
gi|260870890|ref|YP_003237292.1| 30S ribosomal subunit protein S18 [Escherichia coli O111:H- str.
11128]
gi|261225322|ref|ZP_05939603.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255426|ref|ZP_05947959.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
FRIK966]
gi|261345205|ref|ZP_05972849.1| ribosomal protein S18 [Providencia rustigianii DSM 4541]
gi|262045370|ref|ZP_06018394.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|268592870|ref|ZP_06127091.1| ribosomal protein S18 [Providencia rettgeri DSM 1131]
gi|269137725|ref|YP_003294425.1| 30S ribosomal protein S18 [Edwardsiella tarda EIB202]
gi|271501889|ref|YP_003334915.1| 30S ribosomal protein S18 [Dickeya dadantii Ech586]
gi|283786876|ref|YP_003366741.1| 30S ribosomal subunit protein S18 [Citrobacter rodentium ICC168]
gi|283834822|ref|ZP_06354563.1| ribosomal protein S18 [Citrobacter youngae ATCC 29220]
gi|288937503|ref|YP_003441562.1| ribosomal protein S18 [Klebsiella variicola At-22]
gi|289811466|ref|ZP_06542095.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289829953|ref|ZP_06547404.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|290512241|ref|ZP_06551608.1| 30S ribosomal protein S18 [Klebsiella sp. 1_1_55]
gi|291285614|ref|YP_003502432.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. CB9615]
gi|291619075|ref|YP_003521817.1| RpsR [Pantoea ananatis LMG 20103]
gi|292489606|ref|YP_003532496.1| 30S ribosomal protein S18 [Erwinia amylovora CFBP1430]
gi|292898173|ref|YP_003537542.1| 30s ribosomal protein S18 [Erwinia amylovora ATCC 49946]
gi|293393197|ref|ZP_06637512.1| 50S ribosomal protein L21 [Serratia odorifera DSM 4582]
gi|293402827|ref|ZP_06646924.1| 30S ribosomal protein S18 [Escherichia coli FVEC1412]
gi|293407927|ref|ZP_06651767.1| 30S ribosomal protein S18 [Escherichia coli B354]
gi|293417705|ref|ZP_06660327.1| 30S ribosomal protein S18 [Escherichia coli B185]
gi|293476510|ref|ZP_06664918.1| 30S ribosomal protein S18 [Escherichia coli B088]
gi|294634472|ref|ZP_06713007.1| ribosomal protein S18 [Edwardsiella tarda ATCC 23685]
gi|296100965|ref|YP_003611111.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|298378356|ref|ZP_06988240.1| 30S ribosomal protein S18 [Escherichia coli FVEC1302]
gi|300816496|ref|ZP_07096717.1| ribosomal protein S18 [Escherichia coli MS 107-1]
gi|300821296|ref|ZP_07101444.1| ribosomal protein S18 [Escherichia coli MS 119-7]
gi|300899740|ref|ZP_07117965.1| ribosomal protein S18 [Escherichia coli MS 198-1]
gi|300906032|ref|ZP_07123756.1| ribosomal protein S18 [Escherichia coli MS 84-1]
gi|300918336|ref|ZP_07134937.1| ribosomal protein S18 [Escherichia coli MS 115-1]
gi|300922390|ref|ZP_07138510.1| ribosomal protein S18 [Escherichia coli MS 182-1]
gi|300928018|ref|ZP_07143571.1| ribosomal protein S18 [Escherichia coli MS 187-1]
gi|300940689|ref|ZP_07155250.1| ribosomal protein S18 [Escherichia coli MS 21-1]
gi|300949169|ref|ZP_07163211.1| ribosomal protein S18 [Escherichia coli MS 116-1]
gi|300955265|ref|ZP_07167658.1| ribosomal protein S18 [Escherichia coli MS 175-1]
gi|300987233|ref|ZP_07178062.1| ribosomal protein S18 [Escherichia coli MS 45-1]
gi|300988551|ref|ZP_07178747.1| ribosomal protein S18 [Escherichia coli MS 200-1]
gi|301024523|ref|ZP_07188198.1| ribosomal protein S18 [Escherichia coli MS 69-1]
gi|301028025|ref|ZP_07191309.1| ribosomal protein S18 [Escherichia coli MS 196-1]
gi|301045965|ref|ZP_07193148.1| ribosomal protein S18 [Escherichia coli MS 185-1]
gi|301302619|ref|ZP_07208749.1| ribosomal protein S18 [Escherichia coli MS 124-1]
gi|301325967|ref|ZP_07219388.1| ribosomal protein S18 [Escherichia coli MS 78-1]
gi|301646650|ref|ZP_07246516.1| ribosomal protein S18 [Escherichia coli MS 146-1]
gi|306815583|ref|ZP_07449732.1| 30S ribosomal protein S18 [Escherichia coli NC101]
gi|307132412|ref|YP_003884428.1| 30S ribosomal subunit protein S18 [Dickeya dadantii 3937]
gi|307140899|ref|ZP_07500255.1| 30S ribosomal protein S18 [Escherichia coli H736]
gi|307314849|ref|ZP_07594441.1| ribosomal protein S18 [Escherichia coli W]
gi|309787731|ref|ZP_07682342.1| ribosomal protein S18 [Shigella dysenteriae 1617]
gi|309797014|ref|ZP_07691414.1| ribosomal protein S18 [Escherichia coli MS 145-7]
gi|312965875|ref|ZP_07780101.1| ribosomal protein S18 [Escherichia coli 2362-75]
gi|312973990|ref|ZP_07788161.1| ribosomal protein S18 [Escherichia coli 1827-70]
gi|317049740|ref|YP_004117388.1| 30S ribosomal protein S18 [Pantoea sp. At-9b]
gi|317493585|ref|ZP_07952006.1| ribosomal protein S18 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|320539666|ref|ZP_08039330.1| 30S ribosomal subunit protein S18 [Serratia symbiotica str.
Tucson]
gi|330003415|ref|ZP_08304613.1| ribosomal protein S18 [Klebsiella sp. MS 92-3]
gi|331644954|ref|ZP_08346071.1| ribosomal protein S18 [Escherichia coli H736]
gi|331650327|ref|ZP_08351399.1| ribosomal protein S18 [Escherichia coli M605]
gi|331656030|ref|ZP_08357018.1| ribosomal protein S18 [Escherichia coli M718]
gi|331660777|ref|ZP_08361709.1| ribosomal protein S18 [Escherichia coli TA206]
gi|331665866|ref|ZP_08366760.1| ribosomal protein S18 [Escherichia coli TA143]
gi|331671111|ref|ZP_08371944.1| ribosomal protein S18 [Escherichia coli TA271]
gi|331671353|ref|ZP_08372151.1| ribosomal protein S18 [Escherichia coli TA280]
gi|331680332|ref|ZP_08380991.1| ribosomal protein S18 [Escherichia coli H591]
gi|331681220|ref|ZP_08381857.1| ribosomal protein S18 [Escherichia coli H299]
gi|332280987|ref|ZP_08393400.1| ribosomal protein S18 [Shigella sp. D9]
gi|67472372|sp|P0A7T7|RS18_ECOLI RecName: Full=30S ribosomal protein S18
gi|67472373|sp|P0A7T8|RS18_ECOL6 RecName: Full=30S ribosomal protein S18
gi|67472374|sp|P0A7T9|RS18_ECO57 RecName: Full=30S ribosomal protein S18
gi|67472375|sp|P0A7U0|RS18_PHOLL RecName: Full=30S ribosomal protein S18
gi|67472376|sp|P0A7U1|RS18_SALTI RecName: Full=30S ribosomal protein S18
gi|67472377|sp|P0A7U2|RS18_SHIFL RecName: Full=30S ribosomal protein S18
gi|75505387|sp|Q57GI9|RS18_SALCH RecName: Full=30S ribosomal protein S18
gi|81677980|sp|Q5PJ56|RS18_SALPA RecName: Full=30S ribosomal protein S18
gi|123047658|sp|Q0SX84|RS18_SHIF8 RecName: Full=30S ribosomal protein S18
gi|123084302|sp|Q1R358|RS18_ECOUT RecName: Full=30S ribosomal protein S18
gi|123343273|sp|Q0T9J1|RS18_ECOL5 RecName: Full=30S ribosomal protein S18
gi|123728279|sp|Q31TD3|RS18_SHIBS RecName: Full=30S ribosomal protein S18
gi|123728458|sp|Q328J7|RS18_SHIDS RecName: Full=30S ribosomal protein S18
gi|123759489|sp|Q3YUE5|RS18_SHISS RecName: Full=30S ribosomal protein S18
gi|166220942|sp|A8AMJ6|RS18_CITK8 RecName: Full=30S ribosomal protein S18
gi|166220951|sp|A7MM78|RS18_ENTS8 RecName: Full=30S ribosomal protein S18
gi|166220955|sp|A6THB3|RS18_KLEP7 RecName: Full=30S ribosomal protein S18
gi|167011188|sp|A7ZV73|RS18_ECO24 RecName: Full=30S ribosomal protein S18
gi|167011189|sp|A8A7U8|RS18_ECOHS RecName: Full=30S ribosomal protein S18
gi|167011190|sp|A4W5T1|RS18_ENT38 RecName: Full=30S ribosomal protein S18
gi|189029651|sp|A9N520|RS18_SALPB RecName: Full=30S ribosomal protein S18
gi|189029677|sp|B1IT04|RS18_ECOLC RecName: Full=30S ribosomal protein S18
gi|189029686|sp|A9MFK9|RS18_SALAR RecName: Full=30S ribosomal protein S18
gi|226735113|sp|B7MLK7|RS18_ECO45 RecName: Full=30S ribosomal protein S18
gi|226735114|sp|B7NTQ7|RS18_ECO7I RecName: Full=30S ribosomal protein S18
gi|226735115|sp|B7M9G4|RS18_ECO8A RecName: Full=30S ribosomal protein S18
gi|226735116|sp|B7NGD6|RS18_ECOLU RecName: Full=30S ribosomal protein S18
gi|226735117|sp|B1LQM1|RS18_ECOSM RecName: Full=30S ribosomal protein S18
gi|226735119|sp|B7LLY4|RS18_ESCF3 RecName: Full=30S ribosomal protein S18
gi|229559983|sp|B6I2A8|RS18_ECOSE RecName: Full=30S ribosomal protein S18
gi|229559984|sp|B2VCV9|RS18_ERWT9 RecName: Full=30S ribosomal protein S18
gi|229559986|sp|B5Z2K7|RS18_ECO5E RecName: Full=30S ribosomal protein S18
gi|229559987|sp|B1XDV2|RS18_ECODH RecName: Full=30S ribosomal protein S18
gi|229560040|sp|B5Y306|RS18_KLEP3 RecName: Full=30S ribosomal protein S18
gi|229560053|sp|B4F277|RS18_PROMH RecName: Full=30S ribosomal protein S18
gi|229560058|sp|B5F3B9|RS18_SALA4 RecName: Full=30S ribosomal protein S18
gi|229560059|sp|B5FSA3|RS18_SALDC RecName: Full=30S ribosomal protein S18
gi|229560060|sp|B5R0S0|RS18_SALEP RecName: Full=30S ribosomal protein S18
gi|229560061|sp|B5R9F0|RS18_SALG2 RecName: Full=30S ribosomal protein S18
gi|229560062|sp|B4TFD7|RS18_SALHS RecName: Full=30S ribosomal protein S18
gi|229560063|sp|B4T3F3|RS18_SALNS RecName: Full=30S ribosomal protein S18
gi|229560064|sp|B5BKL1|RS18_SALPK RecName: Full=30S ribosomal protein S18
gi|229560065|sp|B4TT35|RS18_SALSV RecName: Full=30S ribosomal protein S18
gi|229560074|sp|B2TY75|RS18_SHIB3 RecName: Full=30S ribosomal protein S18
gi|254765429|sp|B7UQL1|RS18_ECO27 RecName: Full=30S ribosomal protein S18
gi|254765430|sp|B7LCR3|RS18_ECO55 RecName: Full=30S ribosomal protein S18
gi|254765431|sp|B7MST2|RS18_ECO81 RecName: Full=30S ribosomal protein S18
gi|254812953|sp|C0Q6G0|RS18_SALPC RecName: Full=30S ribosomal protein S18
gi|259494808|sp|C4ZR79|RS18_ECOBW RecName: Full=30S ribosomal protein S18
gi|259494809|sp|C5BF78|RS18_EDWI9 RecName: Full=30S ribosomal protein S18
gi|25294828|pir||AI1052 30s ribosomal chain protein S18 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|116666565|pdb|1VS5|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|116666617|pdb|1VS7|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|257097339|pdb|3I1M|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097391|pdb|3I1O|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097443|pdb|3I1Q|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097497|pdb|3I1S|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097551|pdb|3I1Z|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097606|pdb|3I21|R Chain R, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560324|pdb|3KC4|R Chain R, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 3kcr
gi|308198704|pdb|3OR9|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308198725|pdb|3ORA|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634296|pdb|3IZV|V Chain V, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634321|pdb|3IZW|V Chain V, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|26111531|gb|AAN83713.1|AE016771_224 30S ribosomal protein S18 [Escherichia coli CFT073]
gi|42847|emb|CAA27654.1| unnamed protein product [Escherichia coli]
gi|537043|gb|AAA97098.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|1790646|gb|AAC77159.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. MG1655]
gi|13364655|dbj|BAB38601.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
Sakai]
gi|16505518|emb|CAD06870.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|24054886|gb|AAN45772.1| 30S ribosomal subunit protein S18 [Shigella flexneri 2a str. 301]
gi|29140328|gb|AAO71891.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|30043837|gb|AAP19556.1| 30S ribosomal subunit protein S18 [Shigella flexneri 2a str.
2457T]
gi|36787828|emb|CAE16943.1| 30S ribosomal protein S18 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|56130441|gb|AAV79947.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62130470|gb|AAX68173.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73858160|gb|AAZ90867.1| 30S ribosomal subunit protein S18 [Shigella sonnei Ss046]
gi|81243548|gb|ABB64258.1| 30S ribosomal subunit protein S18 [Shigella dysenteriae Sd197]
gi|81247967|gb|ABB68675.1| 30S ribosomal subunit protein S18 [Shigella boydii Sb227]
gi|85676953|dbj|BAE78203.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K12
substr. W3110]
gi|91075325|gb|ABE10206.1| 30S ribosomal subunit protein S18 [Escherichia coli UTI89]
gi|110346151|gb|ABG72388.1| 30S ribosomal protein S18 [Escherichia coli 536]
gi|110617664|gb|ABF06331.1| 30S ribosomal subunit protein S18 [Shigella flexneri 5 str. 8401]
gi|145316914|gb|ABP59061.1| SSU ribosomal protein S18P [Enterobacter sp. 638]
gi|150957917|gb|ABR79947.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|156530677|gb|ABU75503.1| hypothetical protein ESA_00202 [Cronobacter sakazakii ATCC
BAA-894]
gi|157069347|gb|ABV08602.1| ribosomal protein S18 [Escherichia coli HS]
gi|157080670|gb|ABV20378.1| ribosomal protein S18 [Escherichia coli E24377A]
gi|157085031|gb|ABV14709.1| hypothetical protein CKO_03630 [Citrobacter koseri ATCC BAA-895]
gi|160866452|gb|ABX23075.1| hypothetical protein SARI_03239 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161367029|gb|ABX70797.1| hypothetical protein SPAB_05528 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|169756716|gb|ACA79415.1| ribosomal protein S18 [Escherichia coli ATCC 8739]
gi|169891482|gb|ACB05189.1| 30S ribosomal subunit protein S18 [Escherichia coli str. K-12
substr. DH10B]
gi|170124065|gb|EDS92996.1| ribosomal protein S18 [Escherichia albertii TW07627]
gi|170517738|gb|ACB15916.1| ribosomal protein S18 [Escherichia coli SMS-3-5]
gi|187429790|gb|ACD09064.1| ribosomal protein S18 [Shigella boydii CDC 3083-94]
gi|187770314|gb|EDU34158.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4196]
gi|188014502|gb|EDU52624.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4113]
gi|188020113|gb|EDU58153.1| hypothetical protein PROSTU_03885 [Providencia stuartii ATCC
25827]
gi|188030113|emb|CAO97999.1| 30S ribosomal protein S18 [Erwinia tasmaniensis Et1/99]
gi|188490793|gb|EDU65896.1| ribosomal protein S18 [Escherichia coli 53638]
gi|189001716|gb|EDU70702.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4076]
gi|189357840|gb|EDU76259.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4401]
gi|189364286|gb|EDU82705.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4486]
gi|189368871|gb|EDU87287.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4501]
gi|189374715|gb|EDU93131.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC869]
gi|189376068|gb|EDU94484.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC508]
gi|190904315|gb|EDV64024.1| ribosomal protein S18 [Escherichia coli B7A]
gi|190908927|gb|EDV68514.1| ribosomal protein S18 [Escherichia coli F11]
gi|192926321|gb|EDV80957.1| ribosomal protein S18 [Escherichia coli E22]
gi|192955801|gb|EDV86272.1| ribosomal protein S18 [Escherichia coli E110019]
gi|194405470|gb|ACF65692.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408246|gb|ACF68465.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194415332|gb|EDX31600.1| ribosomal protein S18 [Escherichia coli B171]
gi|194417169|gb|EDX33281.1| ribosomal protein S18 [Shigella dysenteriae 1012]
gi|194421536|gb|EDX37549.1| ribosomal protein S18 [Escherichia coli 101-1]
gi|194458780|gb|EDX47619.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194684675|emb|CAR46619.1| 30S ribosomal protein S18 [Proteus mirabilis HI4320]
gi|194709785|gb|ACF89006.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195632565|gb|EDX51019.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197096584|emb|CAR62196.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197213462|gb|ACH50859.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197240072|gb|EDY22692.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197937206|gb|ACH74539.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604951|gb|EDZ03496.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323851|gb|EDZ09046.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205274929|emb|CAR39998.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205347928|gb|EDZ34559.1| ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206568686|gb|ACI10462.1| ribosomal protein S18 [Klebsiella pneumoniae 342]
gi|206711341|emb|CAR35719.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|208728812|gb|EDZ78413.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4206]
gi|208735551|gb|EDZ84238.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4045]
gi|208739127|gb|EDZ86809.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4042]
gi|209161927|gb|ACI39360.1| ribosomal protein S18 [Escherichia coli O157:H7 str. EC4115]
gi|209749988|gb|ACI73301.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749990|gb|ACI73302.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749992|gb|ACI73303.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749994|gb|ACI73304.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209749996|gb|ACI73305.1| 30S ribosomal subunit protein S18 [Escherichia coli]
gi|209914951|dbj|BAG80025.1| 30S ribosomal protein S18 [Escherichia coli SE11]
gi|211638421|emb|CAR67043.1| 30s ribosomal subunit protein s18 [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|212687373|gb|EEB46901.1| hypothetical protein PROVALCAL_01015 [Providencia alcalifaciens
DSM 30120]
gi|215267618|emb|CAS12073.1| 30S ribosomal subunit protein S18 [Escherichia coli O127:H6 str.
E2348/69]
gi|217322723|gb|EEC31147.1| ribosomal protein S18 [Escherichia coli O157:H7 str. TW14588]
gi|218354685|emb|CAV01702.1| 30S ribosomal subunit protein S18 [Escherichia coli 55989]
gi|218359014|emb|CAQ91674.1| 30S ribosomal subunit protein S18 [Escherichia fergusonii ATCC
35469]
gi|218363523|emb|CAR01177.1| 30S ribosomal subunit protein S18 [Escherichia coli IAI1]
gi|218368130|emb|CAR05937.1| 30S ribosomal subunit protein S18 [Escherichia coli S88]
gi|218372884|emb|CAR20764.1| 30S ribosomal subunit protein S18 [Escherichia coli IAI39]
gi|218430149|emb|CAR11007.1| 30S ribosomal subunit protein S18 [Escherichia coli ED1a]
gi|218434910|emb|CAR15848.1| 30S ribosomal subunit protein S18 [Escherichia coli UMN026]
gi|222035972|emb|CAP78717.1| 30S ribosomal protein S18 [Escherichia coli LF82]
gi|224470760|gb|ACN48590.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224962813|emb|CAX54271.1| 30S ribosomal protein S18 [Erwinia pyrifoliae Ep1/96]
gi|225204853|gb|EEG87207.1| hypothetical protein PROPEN_00482 [Proteus penneri ATCC 35198]
gi|226840328|gb|EEH72330.1| ribosomal protein S18 [Escherichia sp. 1_1_43]
gi|226901782|gb|EEH88041.1| 30S ribosomal subunit protein S18 [Escherichia sp. 3_2_53FAA]
gi|226908860|gb|EEH94778.1| 30S ribosomal protein S18 [Citrobacter sp. 30_2]
gi|227162650|gb|EEI47617.1| 30S ribosomal protein S18 [Proteus mirabilis ATCC 29906]
gi|227836327|gb|EEJ46793.1| 30S ribosomal protein S18 [Escherichia coli 83972]
gi|238544998|dbj|BAH61349.1| 30S ribosomal protein S18 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238705881|gb|EEP98270.1| 30S ribosomal protein S18 [Yersinia ruckeri ATCC 29473]
gi|238859792|gb|ACR61790.1| 30S ribosomal subunit protein S18 [Escherichia coli BW2952]
gi|238867953|gb|ACR67664.1| ribosomal protein S18, putative [Edwardsiella ictaluri 93-146]
gi|242130305|gb|ACS84607.1| ribosomal protein S18 [Dickeya dadantii Ech703]
gi|242379723|emb|CAQ34548.1| 30S ribosomal subunit protein S18, subunit of 30S ribosomal
subunit and ribosome [Escherichia coli BL21(DE3)]
gi|247537034|gb|ACT05655.1| ribosomal protein S18 [Dickeya zeae Ech1591]
gi|253326217|gb|ACT30819.1| ribosomal protein S18 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253782993|emb|CAQ86158.1| 30s ribosomal subunit protein s18 [Photorhabdus asymbiotica]
gi|253976032|gb|ACT41703.1| 30S ribosomal protein S18 [Escherichia coli B str. REL606]
gi|253980188|gb|ACT45858.1| 30S ribosomal protein S18 [Escherichia coli BL21(DE3)]
gi|254595621|gb|ACT74982.1| 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
TW14359]
gi|257757003|dbj|BAI28505.1| 30S ribosomal subunit protein S18 [Escherichia coli O26:H11 str.
11368]
gi|257762178|dbj|BAI33675.1| 30S ribosomal subunit protein S18 [Escherichia coli O103:H2 str.
12009]
gi|257767246|dbj|BAI38741.1| 30S ribosomal subunit protein S18 [Escherichia coli O111:H- str.
11128]
gi|259037288|gb|EEW38535.1| 50S ribosomal protein L21 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|260218637|emb|CBA33945.1| 30S ribosomal protein S18 [Cronobacter turicensis z3032]
gi|260450971|gb|ACX41393.1| ribosomal protein S18 [Escherichia coli DH1]
gi|261249483|emb|CBG27348.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267983385|gb|ACY83214.1| 30S ribosomal protein S18 [Edwardsiella tarda EIB202]
gi|267996727|gb|ACY91612.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|270345444|gb|ACZ78209.1| ribosomal protein S18 [Dickeya dadantii Ech586]
gi|281181298|dbj|BAI57628.1| 30S ribosomal protein S18 [Escherichia coli SE15]
gi|281603664|gb|ADA76648.1| 30S ribosomal protein S18 [Shigella flexneri 2002017]
gi|282566898|gb|EFB72433.1| ribosomal protein S18 [Providencia rustigianii DSM 4541]
gi|282950330|emb|CBG89977.1| 30S ribosomal subunit protein S18 [Citrobacter rodentium ICC168]
gi|283477000|emb|CAY72892.1| 30S ribosomal protein S18 [Erwinia pyrifoliae DSM 12163]
gi|284006637|emb|CBA71898.1| 30S ribosomal protein S18 [Arsenophonus nasoniae]
gi|284924382|emb|CBG37504.1| 30S ribosomal subunit protein S18 [Escherichia coli 042]
gi|288892212|gb|ADC60530.1| ribosomal protein S18 [Klebsiella variicola At-22]
gi|289775236|gb|EFD83237.1| 30S ribosomal protein S18 [Klebsiella sp. 1_1_55]
gi|290765487|gb|ADD59448.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. CB9615]
gi|291069070|gb|EFE07179.1| ribosomal protein S18 [Citrobacter youngae ATCC 29220]
gi|291091986|gb|EFE24547.1| ribosomal protein S18 [Edwardsiella tarda ATCC 23685]
gi|291154105|gb|ADD78689.1| RpsR [Pantoea ananatis LMG 20103]
gi|291198021|emb|CBJ45124.1| 30s ribosomal subunit protein S18 [Erwinia amylovora ATCC 49946]
gi|291311659|gb|EFE52112.1| ribosomal protein S18 [Providencia rettgeri DSM 1131]
gi|291320963|gb|EFE60405.1| 30S ribosomal protein S18 [Escherichia coli B088]
gi|291424343|gb|EFE97557.1| 50S ribosomal protein L21 [Serratia odorifera DSM 4582]
gi|291429742|gb|EFF02756.1| 30S ribosomal protein S18 [Escherichia coli FVEC1412]
gi|291430423|gb|EFF03421.1| 30S ribosomal protein S18 [Escherichia coli B185]
gi|291472178|gb|EFF14660.1| 30S ribosomal protein S18 [Escherichia coli B354]
gi|291555043|emb|CBA23114.1| 30S ribosomal protein S18 [Erwinia amylovora CFBP1430]
gi|294492280|gb|ADE91036.1| ribosomal protein S18 [Escherichia coli IHE3034]
gi|295055424|gb|ADF60162.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295098349|emb|CBK87439.1| ribosomal protein S18 [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|298280690|gb|EFI22191.1| 30S ribosomal protein S18 [Escherichia coli FVEC1302]
gi|299878935|gb|EFI87146.1| ribosomal protein S18 [Escherichia coli MS 196-1]
gi|300302008|gb|EFJ58393.1| ribosomal protein S18 [Escherichia coli MS 185-1]
gi|300305897|gb|EFJ60417.1| ribosomal protein S18 [Escherichia coli MS 200-1]
gi|300317842|gb|EFJ67626.1| ribosomal protein S18 [Escherichia coli MS 175-1]
gi|300356712|gb|EFJ72582.1| ribosomal protein S18 [Escherichia coli MS 198-1]
gi|300396522|gb|EFJ80060.1| ribosomal protein S18 [Escherichia coli MS 69-1]
gi|300402199|gb|EFJ85737.1| ribosomal protein S18 [Escherichia coli MS 84-1]
gi|300407710|gb|EFJ91248.1| ribosomal protein S18 [Escherichia coli MS 45-1]
gi|300414468|gb|EFJ97778.1| ribosomal protein S18 [Escherichia coli MS 115-1]
gi|300421209|gb|EFK04520.1| ribosomal protein S18 [Escherichia coli MS 182-1]
gi|300451417|gb|EFK15037.1| ribosomal protein S18 [Escherichia coli MS 116-1]
gi|300454577|gb|EFK18070.1| ribosomal protein S18 [Escherichia coli MS 21-1]
gi|300463969|gb|EFK27462.1| ribosomal protein S18 [Escherichia coli MS 187-1]
gi|300526185|gb|EFK47254.1| ribosomal protein S18 [Escherichia coli MS 119-7]
gi|300530726|gb|EFK51788.1| ribosomal protein S18 [Escherichia coli MS 107-1]
gi|300842144|gb|EFK69904.1| ribosomal protein S18 [Escherichia coli MS 124-1]
gi|300847320|gb|EFK75080.1| ribosomal protein S18 [Escherichia coli MS 78-1]
gi|301075197|gb|EFK90003.1| ribosomal protein S18 [Escherichia coli MS 146-1]
gi|301160880|emb|CBW20412.1| 30s ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|304557782|gb|ADM40446.1| SSU ribosomal protein S18p [Edwardsiella tarda FL6-60]
gi|305851245|gb|EFM51700.1| 30S ribosomal protein S18 [Escherichia coli NC101]
gi|306529941|gb|ADM99871.1| 30S ribosomal subunit protein S18 [Dickeya dadantii 3937]
gi|306905652|gb|EFN36181.1| ribosomal protein S18 [Escherichia coli W]
gi|307556369|gb|ADN49144.1| 30S ribosomal protein S18 [Escherichia coli ABU 83972]
gi|307629274|gb|ADN73578.1| 30S ribosomal protein S18 [Escherichia coli UM146]
gi|308119427|gb|EFO56689.1| ribosomal protein S18 [Escherichia coli MS 145-7]
gi|308924481|gb|EFP69977.1| ribosomal protein S18 [Shigella dysenteriae 1617]
gi|309704706|emb|CBJ04057.1| 30S ribosomal subunit protein S18 [Escherichia coli ETEC H10407]
gi|310331524|gb|EFP98780.1| ribosomal protein S18 [Escherichia coli 1827-70]
gi|310765318|gb|ADP10268.1| 30S ribosomal protein S18 [Erwinia sp. Ejp617]
gi|312173783|emb|CBX82037.1| 30S ribosomal protein S18 [Erwinia amylovora ATCC BAA-2158]
gi|312289118|gb|EFR17012.1| ribosomal protein S18 [Escherichia coli 2362-75]
gi|312915490|dbj|BAJ39464.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|312948852|gb|ADR29679.1| 30S ribosomal subunit protein S18 [Escherichia coli O83:H1 str.
NRG 857C]
gi|313646322|gb|EFS10784.1| ribosomal protein S18 [Shigella flexneri 2a str. 2457T]
gi|315063516|gb|ADT77843.1| 30S ribosomal subunit protein S18 [Escherichia coli W]
gi|315138756|dbj|BAJ45915.1| ribosomal protein S18 [Escherichia coli DH1]
gi|315255547|gb|EFU35515.1| ribosomal protein S18 [Escherichia coli MS 85-1]
gi|315288483|gb|EFU47881.1| ribosomal protein S18 [Escherichia coli MS 110-3]
gi|315293516|gb|EFU52868.1| ribosomal protein S18 [Escherichia coli MS 153-1]
gi|315299082|gb|EFU58336.1| ribosomal protein S18 [Escherichia coli MS 16-3]
gi|315617610|gb|EFU98216.1| ribosomal protein S18 [Escherichia coli 3431]
gi|316918528|gb|EFV39866.1| ribosomal protein S18 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316951357|gb|ADU70832.1| ribosomal protein S18 [Pantoea sp. At-9b]
gi|320030278|gb|EFW12293.1| 30S ribosomal subunit protein S18 [Serratia symbiotica str.
Tucson]
gi|320088819|emb|CBY98577.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|320176373|gb|EFW51428.1| SSU ribosomal protein S18p [Shigella dysenteriae CDC 74-1112]
gi|320177567|gb|EFW52557.1| SSU ribosomal protein S18p [Shigella boydii ATCC 9905]
gi|320187349|gb|EFW62043.1| SSU ribosomal protein S18p [Shigella flexneri CDC 796-83]
gi|320190669|gb|EFW65319.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. EC1212]
gi|320193685|gb|EFW68320.1| SSU ribosomal protein S18p [Escherichia coli WV_060327]
gi|320200670|gb|EFW75256.1| SSU ribosomal protein S18p [Escherichia coli EC4100B]
gi|320638960|gb|EFX08606.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. G5101]
gi|320644329|gb|EFX13394.1| 30S ribosomal protein S18 [Escherichia coli O157:H- str. 493-89]
gi|320649647|gb|EFX18171.1| 30S ribosomal protein S18 [Escherichia coli O157:H- str. H 2687]
gi|320655043|gb|EFX23004.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660550|gb|EFX28011.1| 30S ribosomal protein S18 [Escherichia coli O55:H7 str. USDA
5905]
gi|320665819|gb|EFX32856.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. LSU-61]
gi|321222643|gb|EFX47715.1| SSU ribosomal protein S18p [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615555|gb|EFY12475.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618615|gb|EFY15504.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322621972|gb|EFY18822.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627696|gb|EFY24487.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631003|gb|EFY27767.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637778|gb|EFY34479.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642340|gb|EFY38945.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322643989|gb|EFY40537.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650936|gb|EFY47321.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653579|gb|EFY49907.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659764|gb|EFY56007.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662025|gb|EFY58241.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666226|gb|EFY62404.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672646|gb|EFY68757.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676076|gb|EFY72147.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322680560|gb|EFY76598.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684546|gb|EFY80550.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322717339|gb|EFZ08910.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132730|gb|ADX20160.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323155981|gb|EFZ42143.1| ribosomal protein S18 [Escherichia coli EPECa14]
gi|323161993|gb|EFZ47865.1| ribosomal protein S18 [Escherichia coli E128010]
gi|323166685|gb|EFZ52443.1| ribosomal protein S18 [Shigella sonnei 53G]
gi|323171640|gb|EFZ57286.1| ribosomal protein S18 [Escherichia coli LT-68]
gi|323176040|gb|EFZ61632.1| ribosomal protein S18 [Escherichia coli 1180]
gi|323182307|gb|EFZ67717.1| ribosomal protein S18 [Escherichia coli 1357]
gi|323189920|gb|EFZ75198.1| ribosomal protein S18 [Escherichia coli RN587/1]
gi|323192861|gb|EFZ78087.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197263|gb|EFZ82403.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201620|gb|EFZ86684.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206134|gb|EFZ91096.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213142|gb|EFZ97944.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215516|gb|EGA00260.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219501|gb|EGA03986.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227804|gb|EGA11958.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228974|gb|EGA13103.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236414|gb|EGA20490.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238681|gb|EGA22733.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323241868|gb|EGA25897.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247983|gb|EGA31920.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254686|gb|EGA38497.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258255|gb|EGA41932.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263599|gb|EGA47120.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265805|gb|EGA49301.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270249|gb|EGA53697.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|323380405|gb|ADX52673.1| ribosomal protein S18 [Escherichia coli KO11]
gi|323935327|gb|EGB31675.1| ribosomal protein S18 [Escherichia coli E1520]
gi|323940121|gb|EGB36315.1| ribosomal protein S18 [Escherichia coli E482]
gi|323946051|gb|EGB42088.1| ribosomal protein S18 [Escherichia coli H120]
gi|323950729|gb|EGB46607.1| ribosomal protein S18 [Escherichia coli H252]
gi|323955489|gb|EGB51253.1| ribosomal protein S18 [Escherichia coli H263]
gi|323960246|gb|EGB55887.1| ribosomal protein S18 [Escherichia coli H489]
gi|323965589|gb|EGB61043.1| ribosomal protein S18 [Escherichia coli M863]
gi|323970543|gb|EGB65802.1| ribosomal protein S18 [Escherichia coli TA007]
gi|323975456|gb|EGB70557.1| ribosomal protein S18 [Escherichia coli TW10509]
gi|324005266|gb|EGB74485.1| ribosomal protein S18 [Escherichia coli MS 57-2]
gi|324013801|gb|EGB83020.1| ribosomal protein S18 [Escherichia coli MS 60-1]
gi|324019380|gb|EGB88599.1| ribosomal protein S18 [Escherichia coli MS 117-3]
gi|324112201|gb|EGC06179.1| ribosomal protein S18 [Escherichia fergusonii B253]
gi|324118768|gb|EGC12660.1| ribosomal protein S18 [Escherichia coli E1167]
gi|325499736|gb|EGC97595.1| 30S ribosomal protein S18 [Escherichia fergusonii ECD227]
gi|326345469|gb|EGD69212.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. 1125]
gi|326346674|gb|EGD70408.1| SSU ribosomal protein S18p [Escherichia coli O157:H7 str. 1044]
gi|326626080|gb|EGE32425.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630306|gb|EGE36649.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|327250142|gb|EGE61861.1| ribosomal protein S18 [Escherichia coli STEC_7v]
gi|327395407|dbj|BAK12829.1| 30S ribosomal protein S18 RpsR [Pantoea ananatis AJ13355]
gi|328536975|gb|EGF63268.1| ribosomal protein S18 [Klebsiella sp. MS 92-3]
gi|330908543|gb|EGH37062.1| SSU ribosomal protein S18p [Escherichia coli AA86]
gi|331035929|gb|EGI08167.1| ribosomal protein S18 [Escherichia coli H736]
gi|331040721|gb|EGI12879.1| ribosomal protein S18 [Escherichia coli M605]
gi|331046384|gb|EGI18474.1| ribosomal protein S18 [Escherichia coli M718]
gi|331051819|gb|EGI23858.1| ribosomal protein S18 [Escherichia coli TA206]
gi|331056917|gb|EGI28911.1| ribosomal protein S18 [Escherichia coli TA143]
gi|331061700|gb|EGI33626.1| ribosomal protein S18 [Escherichia coli TA271]
gi|331071198|gb|EGI42555.1| ribosomal protein S18 [Escherichia coli TA280]
gi|331071795|gb|EGI43131.1| ribosomal protein S18 [Escherichia coli H591]
gi|331081441|gb|EGI52602.1| ribosomal protein S18 [Escherichia coli H299]
gi|332083203|gb|EGI88434.1| ribosomal protein S18 [Shigella boydii 5216-82]
gi|332083716|gb|EGI88934.1| ribosomal protein S18 [Shigella dysenteriae 155-74]
gi|332087075|gb|EGI92209.1| ribosomal protein S18 [Shigella boydii 3594-74]
gi|332103339|gb|EGJ06685.1| ribosomal protein S18 [Shigella sp. D9]
gi|332346283|gb|AEE59617.1| ribosomal protein S18 RpsR [Escherichia coli UMNK88]
gi|332749078|gb|EGJ79501.1| ribosomal protein S18 [Shigella flexneri K-671]
gi|332749345|gb|EGJ79766.1| ribosomal protein S18 [Shigella flexneri 4343-70]
gi|332761898|gb|EGJ92172.1| ribosomal protein S18 [Shigella flexneri 2747-71]
gi|332763253|gb|EGJ93496.1| ribosomal protein S18 [Shigella flexneri 2930-71]
gi|332991204|gb|AEF10187.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|333007702|gb|EGK27179.1| ribosomal protein S18 [Shigella flexneri VA-6]
gi|333009033|gb|EGK28489.1| ribosomal protein S18 [Shigella flexneri K-218]
gi|333011183|gb|EGK30597.1| ribosomal protein S18 [Shigella flexneri K-272]
gi|333012623|gb|EGK32003.1| ribosomal protein S18 [Shigella flexneri K-227]
gi|333022347|gb|EGK41585.1| ribosomal protein S18 [Shigella flexneri K-304]
Length = 75
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|303242466|ref|ZP_07328947.1| ribosomal protein S18 [Acetivibrio cellulolyticus CD2]
gi|302589990|gb|EFL59757.1| ribosomal protein S18 [Acetivibrio cellulolyticus CD2]
Length = 95
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C IDYKD+ L +++S+RGKI+P RIS K QR++ A+KR
Sbjct: 24 RMRRAKKKICAFCVDKVTDIDYKDVSKLKKYVSERGKILPRRISGNCAKHQRQMTVAVKR 83
Query: 72 ARYLGLIAYVN 82
AR++ L+ Y +
Sbjct: 84 ARHIALLPYTS 94
>gi|332185156|ref|ZP_08386905.1| ribosomal protein S18 [Sphingomonas sp. S17]
gi|332014880|gb|EGI56936.1| ribosomal protein S18 [Sphingomonas sp. S17]
Length = 74
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP S K APRIDYKD+RLL F+S+RGKIVPSRI+SVS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFSAKDAPRIDYKDVRLLQGFVSERGKIVPSRITSVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ YV
Sbjct: 61 KRARHLGLLPYV 72
>gi|254473485|ref|ZP_05086882.1| ribosomal protein S18 [Pseudovibrio sp. JE062]
gi|211957601|gb|EEA92804.1| ribosomal protein S18 [Pseudovibrio sp. JE062]
Length = 81
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAE + RR RRK+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MAESSSA--GRRPFFRRRKTCPFSGANAPKIDYKDIRLLQRYISERGKIVPSRITAVSAK 58
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ +V
Sbjct: 59 KQRELARAIKRARFLGLLPFV 79
>gi|126661839|ref|ZP_01732838.1| 30S ribosomal protein S18 [Flavobacteria bacterium BAL38]
gi|126625218|gb|EAZ95907.1| 30S ribosomal protein S18 [Flavobacteria bacterium BAL38]
Length = 98
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + + +K C G IDYKD L +F++++GKI+P R++ S K QR+++ A+
Sbjct: 22 LNIDTNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYV 93
>gi|304318114|ref|YP_003853259.1| ribosomal protein S18 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779616|gb|ADL70175.1| ribosomal protein S18 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 88
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYK++ L +++++RGKI+P RI+ QR+L AIKRAR + L+
Sbjct: 25 VCAFCADKIDYIDYKEVGKLRKYITERGKILPRRITGNCAIHQRQLTVAIKRARQIALLP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|331003444|ref|ZP_08326943.1| hypothetical protein HMPREF0491_01805 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412490|gb|EGG91879.1| hypothetical protein HMPREF0491_01805 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 89
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ R+K C G IDYKD+ L +++S+RGKI+P RIS K QRE+ AIK+AR
Sbjct: 20 LRRRKKVCTFCGDKEKAIDYKDVATLRKYISERGKILPRRISGSCAKHQREITVAIKKAR 79
Query: 74 YLGLIAYV 81
++ L+ YV
Sbjct: 80 HIALLPYV 87
>gi|114569762|ref|YP_756442.1| 30S ribosomal protein S18P [Maricaulis maris MCS10]
gi|122316234|sp|Q0AQD3|RS18_MARMM RecName: Full=30S ribosomal protein S18
gi|114340224|gb|ABI65504.1| SSU ribosomal protein S18P [Maricaulis maris MCS10]
Length = 84
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG+ AP ID+KD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 12 RRPFMRRRKVCPFSGENAPAIDFKDPKLLLRYMSERGKIVPSRITAVSAKKQRELARAIK 71
Query: 71 RARYLGLIAYV 81
RAR L L+ YV
Sbjct: 72 RARQLALLPYV 82
>gi|73748806|ref|YP_308045.1| 30S ribosomal protein S18 [Dehalococcoides sp. CBDB1]
gi|147669567|ref|YP_001214385.1| 30S ribosomal protein S18 [Dehalococcoides sp. BAV1]
gi|289432827|ref|YP_003462700.1| ribosomal protein S18 [Dehalococcoides sp. GT]
gi|123773677|sp|Q3ZY14|RS18_DEHSC RecName: Full=30S ribosomal protein S18
gi|205557202|sp|A5FQL1|RS18_DEHSB RecName: Full=30S ribosomal protein S18
gi|73660522|emb|CAI83129.1| ribosomal protein S18 [Dehalococcoides sp. CBDB1]
gi|146270515|gb|ABQ17507.1| SSU ribosomal protein S18P [Dehalococcoides sp. BAV1]
gi|288946547|gb|ADC74244.1| ribosomal protein S18 [Dehalococcoides sp. GT]
Length = 147
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P R + +RK C + RIDYKD L R++S RGKI P R + + QR L
Sbjct: 10 PARGGRGRYTPKRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRAL 69
Query: 66 AKAIKRARYLGLIAYVN 82
A AIKRAR++ L+ +V+
Sbjct: 70 ANAIKRARFIALMPFVS 86
>gi|148381563|ref|YP_001256104.1| ribosomal protein S18 [Clostridium botulinum A str. ATCC 3502]
gi|153932032|ref|YP_001385940.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
19397]
gi|153934477|ref|YP_001389347.1| 30S ribosomal protein S18 [Clostridium botulinum A str. Hall]
gi|153939405|ref|YP_001392982.1| 30S ribosomal protein S18 [Clostridium botulinum F str.
Langeland]
gi|168181093|ref|ZP_02615757.1| ribosomal protein S18 [Clostridium botulinum NCTC 2916]
gi|168183704|ref|ZP_02618368.1| 30S ribosomal protein S18 [Clostridium botulinum Bf]
gi|170756238|ref|YP_001783261.1| 30S ribosomal protein S18 [Clostridium botulinum B1 str. Okra]
gi|170759820|ref|YP_001788968.1| 30S ribosomal protein S18 [Clostridium botulinum A3 str. Loch
Maree]
gi|226951078|ref|YP_002806169.1| ribosomal protein S18 [Clostridium botulinum A2 str. Kyoto]
gi|237797083|ref|YP_002864635.1| 30S ribosomal protein S18 [Clostridium botulinum Ba4 str. 657]
gi|166220944|sp|A7FZG9|RS18_CLOB1 RecName: Full=30S ribosomal protein S18
gi|166220945|sp|A5I7Z9|RS18_CLOBH RecName: Full=30S ribosomal protein S18
gi|166220946|sp|A7GJM2|RS18_CLOBL RecName: Full=30S ribosomal protein S18
gi|229559977|sp|B1IHQ2|RS18_CLOBK RecName: Full=30S ribosomal protein S18
gi|229559978|sp|B1KU95|RS18_CLOBM RecName: Full=30S ribosomal protein S18
gi|254765421|sp|C1FP14|RS18_CLOBJ RecName: Full=30S ribosomal protein S18
gi|259494803|sp|C3KWH8|RS18_CLOB6 RecName: Full=30S ribosomal protein S18
gi|148291047|emb|CAL85184.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
3502]
gi|152928076|gb|ABS33576.1| 30S ribosomal protein S18 [Clostridium botulinum A str. ATCC
19397]
gi|152930391|gb|ABS35890.1| 30S ribosomal protein S18 [Clostridium botulinum A str. Hall]
gi|152935301|gb|ABS40799.1| 30S ribosomal protein S18 [Clostridium botulinum F str.
Langeland]
gi|169121450|gb|ACA45286.1| 30S ribosomal protein S18 [Clostridium botulinum B1 str. Okra]
gi|169406809|gb|ACA55220.1| 30S ribosomal protein S18 [Clostridium botulinum A3 str. Loch
Maree]
gi|182668122|gb|EDT80101.1| ribosomal protein S18 [Clostridium botulinum NCTC 2916]
gi|182673233|gb|EDT85194.1| 30S ribosomal protein S18 [Clostridium botulinum Bf]
gi|226841199|gb|ACO83865.1| ribosomal protein S18 [Clostridium botulinum A2 str. Kyoto]
gi|229260880|gb|ACQ51913.1| 30S ribosomal protein S18 [Clostridium botulinum Ba4 str. 657]
gi|295320957|gb|ADG01335.1| 30S ribosomal protein S18 [Clostridium botulinum F str. 230613]
gi|322807950|emb|CBZ05525.1| SSU ribosomal protein S18p [Clostridium botulinum H04402 065]
Length = 80
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + + IDYKDI L +F+++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 14 KRKVCTFCAEKSEAIDYKDINKLRKFVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|78066641|ref|YP_369410.1| 30S ribosomal protein S18 [Burkholderia sp. 383]
gi|170703446|ref|ZP_02894217.1| ribosomal protein S18 [Burkholderia ambifaria IOP40-10]
gi|170733231|ref|YP_001765178.1| 30S ribosomal protein S18 [Burkholderia cenocepacia MC0-3]
gi|171321592|ref|ZP_02910523.1| ribosomal protein S18 [Burkholderia ambifaria MEX-5]
gi|206560307|ref|YP_002231071.1| 30S ribosomal protein S18 [Burkholderia cenocepacia J2315]
gi|238027018|ref|YP_002911249.1| 30S ribosomal protein S18 [Burkholderia glumae BGR1]
gi|254252204|ref|ZP_04945522.1| Ribosomal protein S18 [Burkholderia dolosa AUO158]
gi|330817223|ref|YP_004360928.1| 30S ribosomal protein S18 [Burkholderia gladioli BSR3]
gi|123742574|sp|Q39FK0|RS18_BURS3 RecName: Full=30S ribosomal protein S18
gi|229559969|sp|B1JTF1|RS18_BURCC RecName: Full=30S ribosomal protein S18
gi|229559970|sp|B4EBH1|RS18_BURCJ RecName: Full=30S ribosomal protein S18
gi|77967386|gb|ABB08766.1| SSU ribosomal protein S18P [Burkholderia sp. 383]
gi|124894813|gb|EAY68693.1| Ribosomal protein S18 [Burkholderia dolosa AUO158]
gi|169816473|gb|ACA91056.1| ribosomal protein S18 [Burkholderia cenocepacia MC0-3]
gi|170131644|gb|EDT00201.1| ribosomal protein S18 [Burkholderia ambifaria IOP40-10]
gi|171093125|gb|EDT38342.1| ribosomal protein S18 [Burkholderia ambifaria MEX-5]
gi|198036348|emb|CAR52244.1| 30S ribosomal protein S18 [Burkholderia cenocepacia J2315]
gi|237876212|gb|ACR28545.1| 30S ribosomal protein S18 [Burkholderia glumae BGR1]
gi|327369616|gb|AEA60972.1| 30S ribosomal protein S18 [Burkholderia gladioli BSR3]
Length = 91
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G +IDYKD L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVEQIDYKDTETLKDFIGENGKITPARLTGTKAHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALLPYTD 87
>gi|308071625|ref|YP_003873230.1| 30S ribosomal protein S18 [Paenibacillus polymyxa E681]
gi|310644855|ref|YP_003949614.1| 30S ribosomal protein s18 [Paenibacillus polymyxa SC2]
gi|305860904|gb|ADM72692.1| 30S ribosomal protein S18 [Paenibacillus polymyxa E681]
gi|309249806|gb|ADO59373.1| 30S ribosomal protein S18 [Paenibacillus polymyxa SC2]
Length = 90
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ P R + RRK C + IDYKD LL +F+S+RGKI+P R++ S K
Sbjct: 9 GDDNKRPARRGGRNKRRKVCFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKY 68
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR L A+KR+R + L+ Y
Sbjct: 69 QRMLTIAVKRSRQIALLPYTT 89
>gi|15896953|ref|NP_350302.1| 30S ribosomal protein S18 [Clostridium acetobutylicum ATCC 824]
gi|20978716|sp|Q97CX4|RS18_CLOAB RecName: Full=30S ribosomal protein S18
gi|15026828|gb|AAK81642.1|AE007867_9 Ribosomal protein S18 [Clostridium acetobutylicum ATCC 824]
gi|325511130|gb|ADZ22766.1| 30S ribosomal protein S18 [Clostridium acetobutylicum EA 2018]
Length = 90
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
P RN +RK C + + IDYKDI L +++++RGKI+P RIS K Q
Sbjct: 10 RDGKRPNGGRNRKMKRKICSFCMEKSESIDYKDINKLRKYVTERGKILPRRISGNCAKHQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
REL AIKRAR + L+ +
Sbjct: 70 RELTIAIKRARNIALLPFTT 89
>gi|150019892|ref|YP_001312146.1| 30S ribosomal protein S18 [Clostridium beijerinckii NCIMB 8052]
gi|189029672|sp|A6M3L0|RS18_CLOB8 RecName: Full=30S ribosomal protein S18
gi|149906357|gb|ABR37190.1| ribosomal protein S18 [Clostridium beijerinckii NCIMB 8052]
Length = 86
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +RR+ R+K C A IDYKDI L +++++RGKI+P RIS K QREL
Sbjct: 12 PGGKMRRS---RKKVCAFCVDKAEFIDYKDINKLRKYVTERGKILPRRISGTCAKHQREL 68
Query: 66 AKAIKRARYLGLIAYVN 82
+IKRAR + L+ +
Sbjct: 69 TSSIKRARNIALLPFTT 85
>gi|326529315|dbj|BAK01051.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 81
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/71 (71%), Positives = 61/71 (85%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQRELAKAIK
Sbjct: 9 RRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAKAIK 68
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 69 RARFLGLLPYV 79
>gi|50122532|ref|YP_051699.1| 30S ribosomal protein S18 [Pectobacterium atrosepticum SCRI1043]
gi|227112366|ref|ZP_03826022.1| 30S ribosomal protein S18 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253689795|ref|YP_003018985.1| ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|261822827|ref|YP_003260933.1| 30S ribosomal protein S18 [Pectobacterium wasabiae WPP163]
gi|59798691|sp|Q6D137|RS18_ERWCT RecName: Full=30S ribosomal protein S18
gi|259494815|sp|C6DE13|RS18_PECCP RecName: Full=30S ribosomal protein S18
gi|49613058|emb|CAG76509.1| 30S ribosomal protein S18 [Pectobacterium atrosepticum SCRI1043]
gi|251756373|gb|ACT14449.1| ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|261606840|gb|ACX89326.1| ribosomal protein S18 [Pectobacterium wasabiae WPP163]
Length = 75
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|33357895|pdb|1P6G|R Chain R, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357972|pdb|1P87|R Chain R, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754056|pdb|2AVY|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of One 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes And
Is Described In Remark 400.
gi|83754112|pdb|2AW7|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File
Contains The 30s Subunit Of The Second 70s Ribosome.
The Entire Crystal Structure Contains Two 70s Ribosomes
And Is Described In Remark 400.
gi|118138070|pdb|2I2P|R Chain R, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|118138141|pdb|2I2U|R Chain R, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described
In Remark 400.
gi|157836038|pdb|2QOU|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836085|pdb|2QOW|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836142|pdb|2QOY|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836189|pdb|2QP0|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429715|pdb|2QAL|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429767|pdb|2QAN|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429825|pdb|2QB9|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429877|pdb|2QBB|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429929|pdb|2QBD|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429981|pdb|2QBF|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430035|pdb|2QBH|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430088|pdb|2QBJ|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431388|pdb|2Z4K|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431441|pdb|2Z4M|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With
Paromomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|168988805|pdb|2VHO|R Chain R, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988826|pdb|2VHP|R Chain R, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107295|pdb|3DF1|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The First 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|197107347|pdb|3DF3|R Chain R, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Hygromycin B Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|329666009|pdb|3J00|R Chain R, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 74
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 2 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 61
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 62 RYLSLLPYTD 71
>gi|182416746|ref|ZP_02948143.1| ribosomal protein S18 [Clostridium butyricum 5521]
gi|237669618|ref|ZP_04529596.1| ribosomal protein S18 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379403|gb|EDT76898.1| ribosomal protein S18 [Clostridium butyricum 5521]
gi|237654852|gb|EEP52414.1| ribosomal protein S18 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 85
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C A IDYKDI L +++++RGKI+P RIS K QREL +IKR
Sbjct: 14 RMRRSRKKVCAFCVDKAEFIDYKDINKLRKYVTERGKILPRRISGTCAKHQRELTTSIKR 73
Query: 72 ARYLGLIAYVN 82
AR + L+ +
Sbjct: 74 ARNIALLPFTT 84
>gi|221639577|ref|YP_002525839.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides KD131]
gi|254812952|sp|B9KJP1|RS18_RHOSK RecName: Full=30S ribosomal protein S18
gi|221160358|gb|ACM01338.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides KD131]
Length = 75
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 55/72 (76%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA A
Sbjct: 1 MANKPFFRRRKVCPFSGDNAPVIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELAAA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|94263201|ref|ZP_01287018.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|94270367|ref|ZP_01291725.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|93450833|gb|EAT01866.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
gi|93456419|gb|EAT06539.1| Ribosomal protein S18 [delta proteobacterium MLMS-1]
Length = 78
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ RRK C + IDYKDI+ L FL++RGKI+P RI + QR+L +A
Sbjct: 1 MQRKKFFGRRKVCRFCADKSLVIDYKDIKNLRGFLTERGKIIPRRIYGNCARHQRQLCEA 60
Query: 69 IKRARYLGLIAY 80
IKRAR + L+ Y
Sbjct: 61 IKRARQIALLPY 72
>gi|115351860|ref|YP_773699.1| 30S ribosomal protein S18 [Burkholderia ambifaria AMMD]
gi|172060830|ref|YP_001808482.1| 30S ribosomal protein S18 [Burkholderia ambifaria MC40-6]
gi|122323038|sp|Q0BEQ8|RS18_BURCM RecName: Full=30S ribosomal protein S18
gi|229559968|sp|B1YRJ2|RS18_BURA4 RecName: Full=30S ribosomal protein S18
gi|115281848|gb|ABI87365.1| SSU ribosomal protein S18P [Burkholderia ambifaria AMMD]
gi|171993347|gb|ACB64266.1| ribosomal protein S18 [Burkholderia ambifaria MC40-6]
Length = 91
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G +IDYKD L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVDQIDYKDTETLKDFIGENGKITPARLTGTKAHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALLPYTD 87
>gi|169335534|ref|ZP_02862727.1| hypothetical protein ANASTE_01948 [Anaerofustis stercorihominis
DSM 17244]
gi|169258272|gb|EDS72238.1| hypothetical protein ANASTE_01948 [Anaerofustis stercorihominis
DSM 17244]
Length = 81
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C IDYKD +LL +++S+R KI+P R++ K QR + +A+ AR
Sbjct: 12 FRRRKKVCYFCENKIEHIDYKDTKLLKKYVSERYKILPRRVTGTCAKHQRGVTQAVNIAR 71
Query: 74 YLGLIAYVN 82
L+ Y
Sbjct: 72 NAALLPYTT 80
>gi|303257677|ref|ZP_07343689.1| ribosomal protein S18 [Burkholderiales bacterium 1_1_47]
gi|331000769|ref|ZP_08324418.1| ribosomal protein S18 [Parasutterella excrementihominis YIT
11859]
gi|302859647|gb|EFL82726.1| ribosomal protein S18 [Burkholderiales bacterium 1_1_47]
gi|329570501|gb|EGG52226.1| ribosomal protein S18 [Parasutterella excrementihominis YIT
11859]
Length = 90
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + + R+K C + +IDYKDI L F+ + GKI+P+R++ QR+L
Sbjct: 14 PNQQNALFKRKKFCRFTVDHVDQIDYKDIDTLRDFIQENGKIMPARLTGTKAHYQRQLDT 73
Query: 68 AIKRARYLGLIAYVN 82
AIKRAR+L L+AY +
Sbjct: 74 AIKRARFLALLAYTD 88
>gi|296134460|ref|YP_003641707.1| ribosomal protein S18 [Thermincola sp. JR]
gi|296033038|gb|ADG83806.1| ribosomal protein S18 [Thermincola potens JR]
Length = 76
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD L +++++RGKI+P RIS K QR+L AIKRAR++ L+
Sbjct: 13 VCSFCVDKVEAIDYKDSAKLRKYITERGKILPRRISGNCAKHQRQLTTAIKRARHMALLP 72
Query: 80 YV 81
+
Sbjct: 73 FT 74
>gi|260437868|ref|ZP_05791684.1| ribosomal protein S18 [Butyrivibrio crossotus DSM 2876]
gi|292809894|gb|EFF69099.1| ribosomal protein S18 [Butyrivibrio crossotus DSM 2876]
Length = 88
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+ +R R+K C IDYKD L RF+S+RGKI+P RI+ K QR
Sbjct: 10 TDAPMKKRINRRRKKVCVFCADSTNVIDYKDANKLKRFVSERGKILPRRITGTCAKHQRA 69
Query: 65 LAKAIKRARYLGLIAYV 81
L A+KRAR + ++ Y
Sbjct: 70 LTVAVKRARQIAILPYT 86
>gi|110634267|ref|YP_674475.1| 30S ribosomal protein S18 [Mesorhizobium sp. BNC1]
gi|122965901|sp|Q11H15|RS18_MESSB RecName: Full=30S ribosomal protein S18
gi|110285251|gb|ABG63310.1| SSU ribosomal protein S18P [Chelativorans sp. BNC1]
Length = 82
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+LGL+ YV
Sbjct: 60 KQRELARAIKRARFLGLLPYV 80
>gi|146301223|ref|YP_001195814.1| 30S ribosomal protein S18 [Flavobacterium johnsoniae UW101]
gi|205557694|sp|A5FE76|RS18_FLAJO RecName: Full=30S ribosomal protein S18
gi|146155641|gb|ABQ06495.1| 30S ribosomal protein S18 [Flavobacterium johnsoniae UW101]
Length = 98
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + +K C G IDYKD L +F++++GKI+P R++ S K QR+++ A+
Sbjct: 22 LNIETNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYV 93
>gi|313674400|ref|YP_004052396.1| SSU ribosomal protein s18p [Marivirga tractuosa DSM 4126]
gi|312941098|gb|ADR20288.1| SSU ribosomal protein S18P [Marivirga tractuosa DSM 4126]
Length = 85
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 51/75 (68%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P+ ++ +++K C G IDYKD L +F++++GK++PSRI+ S K Q+++A+
Sbjct: 7 PINQKKQDNQKKYCRFKRYGIKYIDYKDPNFLLKFVNEQGKLLPSRITGTSAKYQKKVAQ 66
Query: 68 AIKRARYLGLIAYVN 82
A+KRAR++ L+ YV
Sbjct: 67 AVKRARHIALLPYVT 81
>gi|163759110|ref|ZP_02166196.1| 30S ribosomal protein S18 [Hoeflea phototrophica DFL-43]
gi|162283514|gb|EDQ33799.1| 30S ribosomal protein S18 [Hoeflea phototrophica DFL-43]
Length = 82
Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|320161644|ref|YP_004174869.1| 30S ribosomal protein S18 [Anaerolinea thermophila UNI-1]
gi|319995498|dbj|BAJ64269.1| 30S ribosomal protein S18 [Anaerolinea thermophila UNI-1]
Length = 90
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +RR V+ R K C +IDYK + LL R++++ GKI P R + K QRELA
Sbjct: 11 QPQMRRYVA-RPKICQFCVDKNIKIDYKAVDLLRRYVTEEGKIRPRRQTGTCAKHQRELA 69
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR+L + +V
Sbjct: 70 TAIKRARHLAFLPFV 84
>gi|257065460|ref|YP_003145132.1| SSU ribosomal protein S18P [Slackia heliotrinireducens DSM 20476]
gi|256793113|gb|ACV23783.1| SSU ribosomal protein S18P [Slackia heliotrinireducens DSM 20476]
Length = 86
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MAE + P RRK C +DYKD LL ++++ RGKI P R++ +
Sbjct: 1 MAEYSKQP--------RRKYCQFCKDDTEYVDYKDTALLRKYMTDRGKIKPRRVTGACVQ 52
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR++A AIK AR +GL+ Y
Sbjct: 53 HQRDVANAIKNAREMGLMPYT 73
>gi|139439449|ref|ZP_01772890.1| Hypothetical protein COLAER_01910 [Collinsella aerofaciens ATCC
25986]
gi|133775228|gb|EBA39048.1| Hypothetical protein COLAER_01910 [Collinsella aerofaciens ATCC
25986]
Length = 88
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR
Sbjct: 8 RQPRRKYCQFCKENTEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAR 67
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 68 EMALLPYT 75
>gi|13476509|ref|NP_108079.1| 30S ribosomal protein S18 [Mesorhizobium loti MAFF303099]
gi|260466964|ref|ZP_05813146.1| ribosomal protein S18 [Mesorhizobium opportunistum WSM2075]
gi|319784439|ref|YP_004143915.1| ribosomal protein S18 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|20978722|sp|Q984T9|RS18_RHILO RecName: Full=30S ribosomal protein S18
gi|14027270|dbj|BAB54224.1| 30S ribosomal protein S18 [Mesorhizobium loti MAFF303099]
gi|259029261|gb|EEW30555.1| ribosomal protein S18 [Mesorhizobium opportunistum WSM2075]
gi|317170327|gb|ADV13865.1| ribosomal protein S18 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 82
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSGANAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|134095345|ref|YP_001100420.1| 30S ribosomal protein S18 [Herminiimonas arsenicoxydans]
gi|133739248|emb|CAL62297.1| 30S ribosomal protein S18 [Herminiimonas arsenicoxydans]
Length = 94
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++ + + R+K C + ++DYKD+ L F+ + GKI+P+R++
Sbjct: 10 SKLKEKRKQQNPLFKRKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAIY 69
Query: 62 QRELAKAIKRARYLGLIAYVNL 83
QR++ AIKRAR+L L+ Y +L
Sbjct: 70 QRQVDTAIKRARFLALLPYTDL 91
>gi|156741510|ref|YP_001431639.1| 30S ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
gi|205556478|sp|A7NJF1|RS181_ROSCS RecName: Full=30S ribosomal protein S18 1
gi|156232838|gb|ABU57621.1| ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
Length = 90
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYKD++ L R +S+RGKI+P R + V + QR L AIKRAR++
Sbjct: 20 RRKVCAFCADKIRVVDYKDVKRLQRCMSERGKILPRRRTGVCARHQRSLTVAIKRARHMA 79
Query: 77 LIAYV 81
L+ +V
Sbjct: 80 LLPFV 84
>gi|302879168|ref|YP_003847732.1| 30S ribosomal protein S18 [Gallionella capsiferriformans ES-2]
gi|302581957|gb|ADL55968.1| ribosomal protein S18 [Gallionella capsiferriformans ES-2]
Length = 91
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ R N+ RRK C + + +DYKD+ +L F+S+ GK++P+RI+ +
Sbjct: 9 TDDKKKRFSRNNLFKRRKFCRFTVEKIAEVDYKDVNILKEFISENGKLIPARITGTKTRY 68
Query: 62 QRELAKAIKRARYLGLIAYVNL 83
QR+L+ A+KRAR+L L+ Y +L
Sbjct: 69 QRQLSTAVKRARFLALLPYTDL 90
>gi|110746771|gb|ABG89277.1| ribosomal protein S18 [Paenibacillus larvae]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKDI L +F+S+RGKI+P R++ S K QR L AIKRAR + L+
Sbjct: 12 VCYFTANKIKHIDYKDIDTLKKFISERGKILPRRVTGTSAKYQRMLTIAIKRARQVALLP 71
Query: 80 YVN 82
Y
Sbjct: 72 YTT 74
>gi|27904981|ref|NP_778107.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29611842|sp|P59502|RS18_BUCBP RecName: Full=30S ribosomal protein S18
gi|27904379|gb|AAO27212.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKD+ +L ++++ GKIVPSRI+ S + QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTVEKIKEIDYKDLSMLKNYITESGKIVPSRITGTSARYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|292493500|ref|YP_003528939.1| ribosomal protein S18 [Nitrosococcus halophilus Nc4]
gi|291582095|gb|ADE16552.1| ribosomal protein S18 [Nitrosococcus halophilus Nc4]
Length = 74
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++++ GKIVPSRI+ K QR+L++A+KRA
Sbjct: 3 RYFRRRKFCRFTAEGVKEIDYKDLATLKEYITETGKIVPSRITGTKAKYQRQLSRAVKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLALLPYCD 72
>gi|160892971|ref|ZP_02073759.1| hypothetical protein CLOL250_00508 [Clostridium sp. L2-50]
gi|156865054|gb|EDO58485.1| hypothetical protein CLOL250_00508 [Clostridium sp. L2-50]
Length = 87
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A P+ RRN+ R+K C IDYKD L R++S+RGKI+P RI+ K
Sbjct: 6 TDRADAPMKRRNIRRRKKVCVFCADKTAVIDYKDANKLKRYISERGKILPRRITGNCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L A+KRAR + ++ YV
Sbjct: 66 QRALTVAVKRARQIAILPYV 85
>gi|77463711|ref|YP_353215.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides 2.4.1]
gi|126462540|ref|YP_001043654.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides ATCC 17029]
gi|146277394|ref|YP_001167553.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides ATCC 17025]
gi|332558562|ref|ZP_08412884.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides WS8N]
gi|123591680|sp|Q3J1M0|RS18_RHOS4 RecName: Full=30S ribosomal protein S18
gi|166220980|sp|A3PKL6|RS18_RHOS1 RecName: Full=30S ribosomal protein S18
gi|166220981|sp|A4WS84|RS18_RHOS5 RecName: Full=30S ribosomal protein S18
gi|77388129|gb|ABA79314.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides 2.4.1]
gi|126104204|gb|ABN76882.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides ATCC 17029]
gi|145555635|gb|ABP70248.1| SSU ribosomal protein S18P [Rhodobacter sphaeroides ATCC 17025]
gi|332276274|gb|EGJ21589.1| 30S ribosomal protein S18 [Rhodobacter sphaeroides WS8N]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 55/72 (76%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA A
Sbjct: 1 MANKPFFRRRKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELAAA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|220927516|ref|YP_002504425.1| 30S ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|326202835|ref|ZP_08192702.1| ribosomal protein S18 [Clostridium papyrosolvens DSM 2782]
gi|219997844|gb|ACL74445.1| ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|325986912|gb|EGD47741.1| ribosomal protein S18 [Clostridium papyrosolvens DSM 2782]
Length = 97
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C A IDYKD+ + +++S+RGKI+P RIS K QR+L A+KR
Sbjct: 26 RMRRVKKKVCSFCVDKATDIDYKDVAKIRKYVSERGKILPRRISGNCAKHQRQLTVAVKR 85
Query: 72 ARYLGLIAYV 81
AR++ L+ Y
Sbjct: 86 ARHIALLPYT 95
>gi|186475678|ref|YP_001857148.1| 30S ribosomal protein S18 [Burkholderia phymatum STM815]
gi|229559972|sp|B2JG20|RS18_BURP8 RecName: Full=30S ribosomal protein S18
gi|184192137|gb|ACC70102.1| ribosomal protein S18 [Burkholderia phymatum STM815]
Length = 91
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G +IDYKDI L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVEQIDYKDIDTLKDFIGENGKITPARLTGTKAHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALMPYTD 87
>gi|294851832|ref|ZP_06792505.1| 30S ribosomal protein S18 [Brucella sp. NVSL 07-0026]
gi|294820421|gb|EFG37420.1| 30S ribosomal protein S18 [Brucella sp. NVSL 07-0026]
Length = 82
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP S AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSSANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|290473411|ref|YP_003466277.1| 30S ribosomal subunit protein S18 [Xenorhabdus bovienii SS-2004]
gi|289172710|emb|CBJ79481.1| 30S ribosomal subunit protein S18 [Xenorhabdus bovienii SS-2004]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|88800242|ref|ZP_01115809.1| ribosomal protein S18 [Reinekea sp. MED297]
gi|88776957|gb|EAR08165.1| ribosomal protein S18 [Reinekea sp. MED297]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ LL ++++ GKIVPSRI+ S K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGITEIDYKDVDLLKGYITETGKIVPSRITGTSAKYQRQLATAIKRARYLALLPYTD 72
>gi|260893966|ref|YP_003240063.1| ribosomal protein S18 [Ammonifex degensii KC4]
gi|260866107|gb|ACX53213.1| ribosomal protein S18 [Ammonifex degensii KC4]
Length = 76
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + ++DYKD+ L +F+S RGKI+P RI+ + QR L AIKRAR + L+
Sbjct: 13 ICSFCVEKIDKVDYKDVNRLKKFISDRGKILPRRITGNCARHQRMLTVAIKRARIMALLP 72
Query: 80 YVN 82
+V+
Sbjct: 73 FVS 75
>gi|262369755|ref|ZP_06063083.1| 30S ribosomal protein S18 [Acinetobacter johnsonii SH046]
gi|262375305|ref|ZP_06068538.1| ribosomal protein S18 [Acinetobacter lwoffii SH145]
gi|262309559|gb|EEY90689.1| ribosomal protein S18 [Acinetobacter lwoffii SH145]
gi|262315823|gb|EEY96862.1| 30S ribosomal protein S18 [Acinetobacter johnsonii SH046]
Length = 75
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAENVTYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LI Y +
Sbjct: 63 RYLSLIPYTD 72
>gi|194396735|ref|YP_002038171.1| 30S ribosomal protein S18 [Streptococcus pneumoniae G54]
gi|229560070|sp|B5E6A4|RS18_STRP4 RecName: Full=30S ribosomal protein S18
gi|194356402|gb|ACF54850.1| ribosomal protein S18 [Streptococcus pneumoniae G54]
Length = 79
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTXAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ +VN
Sbjct: 66 RARVMALMPFVN 77
>gi|313122784|ref|YP_004033043.1| 30S ribosomal protein s18 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279347|gb|ADQ60066.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685098|gb|EGD27229.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 78
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P RR RRK ++ +DYKD+ LL F+S+RGKI+P R++ S K QR++AK
Sbjct: 2 PQQRRGGRRRRKVDFIAANHIDYVDYKDVDLLKHFISERGKILPRRVTGTSAKNQRKVAK 61
Query: 68 AIKRARYLGLIAYV 81
AIKRAR +GL+ +V
Sbjct: 62 AIKRARIMGLLPFV 75
>gi|323526189|ref|YP_004228342.1| 30S ribosomal protein S18 [Burkholderia sp. CCGE1001]
gi|323383191|gb|ADX55282.1| ribosomal protein S18 [Burkholderia sp. CCGE1001]
Length = 91
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G IDYKDI L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKAHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALVPYTD 87
>gi|291521978|emb|CBK80271.1| SSU ribosomal protein S18P [Coprococcus catus GD/7]
Length = 87
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD L R++S+RGKI+P RI+ K QR+L AIKRAR++ L+
Sbjct: 24 VCVYCVDKNAVIDYKDTNKLKRYISERGKILPRRITGNCAKHQRKLTTAIKRARHIALMP 83
Query: 80 YVN 82
Y+
Sbjct: 84 YIT 86
>gi|254418129|ref|ZP_05031853.1| ribosomal protein S18 [Brevundimonas sp. BAL3]
gi|196184306|gb|EDX79282.1| ribosomal protein S18 [Brevundimonas sp. BAL3]
Length = 92
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIK
Sbjct: 20 RRPFYRRRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSQKKQRELAKAIK 79
Query: 71 RARYLGLIAYV 81
RARYL L+ YV
Sbjct: 80 RARYLALLPYV 90
>gi|153007913|ref|YP_001369128.1| 30S ribosomal protein S18 [Ochrobactrum anthropi ATCC 49188]
gi|239831324|ref|ZP_04679653.1| ribosomal protein S18 [Ochrobactrum intermedium LMG 3301]
gi|166220966|sp|A6WWE5|RS18_OCHA4 RecName: Full=30S ribosomal protein S18
gi|151559801|gb|ABS13299.1| ribosomal protein S18 [Ochrobactrum anthropi ATCC 49188]
gi|239823591|gb|EEQ95159.1| ribosomal protein S18 [Ochrobactrum intermedium LMG 3301]
Length = 82
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|18311622|ref|NP_563556.1| 30S ribosomal protein S18 [Clostridium perfringens str. 13]
gi|110801194|ref|YP_697330.1| 30S ribosomal protein S18 [Clostridium perfringens ATCC 13124]
gi|110801451|ref|YP_699889.1| 30S ribosomal protein S18 [Clostridium perfringens SM101]
gi|168207913|ref|ZP_02633918.1| ribosomal protein S18 [Clostridium perfringens E str. JGS1987]
gi|168211574|ref|ZP_02637199.1| ribosomal protein S18 [Clostridium perfringens B str. ATCC 3626]
gi|168214826|ref|ZP_02640451.1| ribosomal protein S18 [Clostridium perfringens CPE str. F4969]
gi|168218034|ref|ZP_02643659.1| ribosomal protein S18 [Clostridium perfringens NCTC 8239]
gi|169343454|ref|ZP_02864454.1| ribosomal protein S18 [Clostridium perfringens C str. JGS1495]
gi|182626399|ref|ZP_02954152.1| ribosomal protein S18 [Clostridium perfringens D str. JGS1721]
gi|20978678|sp|Q8XH45|RS18_CLOPE RecName: Full=30S ribosomal protein S18
gi|122958625|sp|Q0TM10|RS18_CLOP1 RecName: Full=30S ribosomal protein S18
gi|123341463|sp|Q0SPR8|RS18_CLOPS RecName: Full=30S ribosomal protein S18
gi|18146306|dbj|BAB82346.1| 30S ribosomal protein S18 [Clostridium perfringens str. 13]
gi|110675841|gb|ABG84828.1| 30S ribosomal protein S18 [Clostridium perfringens ATCC 13124]
gi|110681952|gb|ABG85322.1| 30S ribosomal protein S18 [Clostridium perfringens SM101]
gi|169298406|gb|EDS80495.1| ribosomal protein S18 [Clostridium perfringens C str. JGS1495]
gi|170660796|gb|EDT13479.1| ribosomal protein S18 [Clostridium perfringens E str. JGS1987]
gi|170710455|gb|EDT22637.1| ribosomal protein S18 [Clostridium perfringens B str. ATCC 3626]
gi|170713723|gb|EDT25905.1| ribosomal protein S18 [Clostridium perfringens CPE str. F4969]
gi|177908273|gb|EDT70826.1| ribosomal protein S18 [Clostridium perfringens D str. JGS1721]
gi|182379953|gb|EDT77432.1| ribosomal protein S18 [Clostridium perfringens NCTC 8239]
Length = 80
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+ V RR R+K C A IDYKD+ L +++++RGKI+P RIS K
Sbjct: 1 MSNVKRGGKFRRA---RKKVCIFCVDKAESIDYKDVAKLKKYITERGKILPRRISGTCAK 57
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR+L AIKR+R + L+ +
Sbjct: 58 HQRQLTDAIKRSRNIALLPFTT 79
>gi|229829467|ref|ZP_04455536.1| hypothetical protein GCWU000342_01557 [Shuttleworthia satelles
DSM 14600]
gi|229791898|gb|EEP28012.1| hypothetical protein GCWU000342_01557 [Shuttleworthia satelles
DSM 14600]
Length = 76
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RR RRK C G IDYKD L +++S+RGKI+P RI+ + QR L A
Sbjct: 3 FNRRPAHRRRKVCVFCGSEV-AIDYKDANQLRKYVSERGKILPRRITGTCARHQRALTSA 61
Query: 69 IKRARYLGLIAYVN 82
IKRAR+L ++ YV
Sbjct: 62 IKRARHLAIMPYVE 75
>gi|168187295|ref|ZP_02621930.1| ribosomal protein S18 [Clostridium botulinum C str. Eklund]
gi|169294783|gb|EDS76916.1| ribosomal protein S18 [Clostridium botulinum C str. Eklund]
Length = 78
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ L +++++RGKI+P RIS K QREL AIKRAR + L+
Sbjct: 15 VCAFCADKSSSIDYKDVNKLRKYVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLP 74
Query: 80 YVN 82
+
Sbjct: 75 FTT 77
>gi|118444188|ref|YP_876991.1| 30S ribosomal protein S18 [Clostridium novyi NT]
gi|166220947|sp|A0PX89|RS18_CLONN RecName: Full=30S ribosomal protein S18
gi|118134644|gb|ABK61688.1| ribosomal protein S18 [Clostridium novyi NT]
Length = 78
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ L +++++RGKI+P RIS K QREL AIKRAR + L+
Sbjct: 15 VCAFCADKSSSIDYKDVNKLRKYVTERGKILPRRISGNCAKHQRELTLAIKRARNVALLP 74
Query: 80 YVN 82
+
Sbjct: 75 FTT 77
>gi|148265697|ref|YP_001232403.1| 30S ribosomal protein S18 [Geobacter uraniireducens Rf4]
gi|189029678|sp|A5G7R2|RS18_GEOUR RecName: Full=30S ribosomal protein S18
gi|146399197|gb|ABQ27830.1| SSU ribosomal protein S18P [Geobacter uraniireducens Rf4]
Length = 91
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIK
Sbjct: 15 KKRPFQRRKVCRFCADKQVSIDYKDPRTLRYFISERGKIIPRRISGNCAKHQREITEAIK 74
Query: 71 RARYLGLIA 79
RAR + L+
Sbjct: 75 RARNIALLP 83
>gi|222054669|ref|YP_002537031.1| ribosomal protein S18 [Geobacter sp. FRC-32]
gi|254812941|sp|B9M5U9|RS18_GEOSF RecName: Full=30S ribosomal protein S18
gi|221563958|gb|ACM19930.1| ribosomal protein S18 [Geobacter sp. FRC-32]
Length = 91
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 42/73 (57%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
T ++ RRK C IDYKD R L F+S+RGKI+P RIS K QRE+
Sbjct: 11 TGPRKKRPFQRRKVCRFCADKQVTIDYKDPRTLRYFISERGKIIPRRISGNCAKHQREIT 70
Query: 67 KAIKRARYLGLIA 79
+AIKRAR + L+
Sbjct: 71 EAIKRARNIALLP 83
>gi|16125914|ref|NP_420478.1| 30S ribosomal protein S18 [Caulobacter crescentus CB15]
gi|167646473|ref|YP_001684136.1| 30S ribosomal protein S18 [Caulobacter sp. K31]
gi|221234677|ref|YP_002517113.1| 30S ribosomal protein S18 [Caulobacter crescentus NA1000]
gi|20978733|sp|Q9A7Q2|RS18_CAUCR RecName: Full=30S ribosomal protein S18
gi|189029669|sp|B0SWL0|RS18_CAUSK RecName: Full=30S ribosomal protein S18
gi|254765418|sp|B8GVN5|RS18_CAUCN RecName: Full=30S ribosomal protein S18
gi|13423076|gb|AAK23646.1| ribosomal protein S18 [Caulobacter crescentus CB15]
gi|167348903|gb|ABZ71638.1| ribosomal protein S18 [Caulobacter sp. K31]
gi|220963849|gb|ACL95205.1| SSU ribosomal protein S18P [Caulobacter crescentus NA1000]
Length = 92
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR
Sbjct: 23 FFRRRKVCPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRAR 82
Query: 74 YLGLIAYV 81
+L L+ YV
Sbjct: 83 FLALLPYV 90
>gi|163842734|ref|YP_001627138.1| 30S ribosomal protein S18 [Brucella suis ATCC 23445]
gi|189029668|sp|B0CKD8|RS18_BRUSI RecName: Full=30S ribosomal protein S18
gi|163673457|gb|ABY37568.1| ribosomal protein S18 [Brucella suis ATCC 23445]
Length = 82
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ P RR R K+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDINQIP-TRRPFHRRHKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELAKAIKRAR+LGL+ YV
Sbjct: 60 KQRELAKAIKRARFLGLLPYV 80
>gi|126651975|ref|ZP_01724167.1| ribosomal protein S18 [Bacillus sp. B14905]
gi|299541785|ref|ZP_07052108.1| 30S ribosomal protein S18 [Lysinibacillus fusiformis ZC1]
gi|126591244|gb|EAZ85353.1| ribosomal protein S18 [Bacillus sp. B14905]
gi|298725523|gb|EFI66164.1| 30S ribosomal protein S18 [Lysinibacillus fusiformis ZC1]
Length = 78
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL +F+S+RGKI+P R++ S K QR+L AIK +R +GL+
Sbjct: 13 VCYFTSNNITHIDYKDVDLLKKFISERGKILPRRVTGTSAKYQRKLTSAIKVSRIMGLLP 72
Query: 80 YV 81
+V
Sbjct: 73 FV 74
>gi|160881890|ref|YP_001560858.1| 30S ribosomal protein S18 [Clostridium phytofermentans ISDg]
gi|160430556|gb|ABX44119.1| ribosomal protein S18 [Clostridium phytofermentans ISDg]
Length = 91
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGA-PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ P+ RR R+K C IDYKD+ L R++S+RGKI+P RI+ K
Sbjct: 9 GDKGDAPMKRRMTRRRKKVCAFCADKNHKEIDYKDVNKLKRYVSERGKILPRRITGNCAK 68
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR L A+KRAR++ L+ Y
Sbjct: 69 HQRALTVAVKRARHIALMPYT 89
>gi|163790927|ref|ZP_02185350.1| 30S ribosomal protein S18 [Carnobacterium sp. AT7]
gi|159873769|gb|EDP67850.1| 30S ribosomal protein S18 [Carnobacterium sp. AT7]
Length = 79
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RR RRK + +DYKD+ LL RF+S+RG+I+P R++ K QR+L KA
Sbjct: 3 QQRRGGKKRRKVDFFAANHIEHVDYKDVDLLKRFISERGRILPRRVTGTYAKNQRKLTKA 62
Query: 69 IKRARYLGLIAYVN 82
IKRAR +GL+ +V
Sbjct: 63 IKRARIMGLLPFVT 76
>gi|119713694|gb|ABL97744.1| ribosomal protein S18 [uncultured marine bacterium EB0_41B09]
Length = 75
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 50/73 (68%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R++ RR+ C S +G +DYKD+ +L F+++ GK++P+RI+ + QR+L+ A+
Sbjct: 1 MARDMYKRRRYCRFSAEGISEVDYKDVSILKDFITENGKLIPARITGTKARYQRQLSTAV 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ + +
Sbjct: 61 KRARFLALLPFTD 73
>gi|218282110|ref|ZP_03488409.1| hypothetical protein EUBIFOR_00984 [Eubacterium biforme DSM 3989]
gi|218216903|gb|EEC90441.1| hypothetical protein EUBIFOR_00984 [Eubacterium biforme DSM 3989]
Length = 76
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF++ GKI+P R++ K QR LA AI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIKEIDYKDVELLKRFINANGKIIPRRVTGTRAKYQRMLATAI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYV 74
>gi|261410090|ref|YP_003246331.1| 30S ribosomal protein S18 [Paenibacillus sp. Y412MC10]
gi|315644249|ref|ZP_07897419.1| ribosomal protein S18 [Paenibacillus vortex V453]
gi|329925101|ref|ZP_08280045.1| ribosomal protein S18 [Paenibacillus sp. HGF5]
gi|261286553|gb|ACX68524.1| ribosomal protein S18 [Paenibacillus sp. Y412MC10]
gi|315280624|gb|EFU43913.1| ribosomal protein S18 [Paenibacillus vortex V453]
gi|328940220|gb|EGG36552.1| ribosomal protein S18 [Paenibacillus sp. HGF5]
Length = 90
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ P R + RRK C + IDYKD LL +F+S+RGKI+P R++ S K
Sbjct: 9 GDNDKRPARRGGRNKRRKVCFFTVNKITHIDYKDTDLLKKFISERGKILPRRVTGTSAKY 68
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR L AIKR+R + L+ Y
Sbjct: 69 QRALTIAIKRSRQIALLPYTT 89
>gi|326799756|ref|YP_004317575.1| 30S ribosomal protein S18 [Sphingobacterium sp. 21]
gi|326550520|gb|ADZ78905.1| 30S ribosomal protein S18 [Sphingobacterium sp. 21]
Length = 87
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR++G
Sbjct: 18 RKKYCRFKKNGIKYIDYKDANFLLKFVNDQGKILPRRLTGTSLKFQRKVAQAVKRARHIG 77
Query: 77 LIAYVN 82
L+ YV
Sbjct: 78 LLPYVT 83
>gi|300812002|ref|ZP_07092458.1| ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497028|gb|EFK32094.1| ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 78
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P RR RRK ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++A
Sbjct: 2 PQQRRGGRRRRKVDFIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVAN 61
Query: 68 AIKRARYLGLIAYV 81
AIKRAR +GL+ +V
Sbjct: 62 AIKRARIMGLLPFV 75
>gi|323141489|ref|ZP_08076378.1| ribosomal protein S18 [Phascolarctobacterium sp. YIT 12067]
gi|322414069|gb|EFY04899.1| ribosomal protein S18 [Phascolarctobacterium sp. YIT 12067]
Length = 76
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L R++++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 12 KVCSFCVDKVEEIDYKDANKLKRYITERGKILPRRISGTCAKHQRQLTVAIKRARCVALL 71
Query: 79 AYV 81
+
Sbjct: 72 PFT 74
>gi|257783834|ref|YP_003179051.1| 30S ribosomal protein S18 [Atopobium parvulum DSM 20469]
gi|257472341|gb|ACV50460.1| ribosomal protein S18 [Atopobium parvulum DSM 20469]
Length = 90
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRA
Sbjct: 9 QRQPRRKYCQFCKEETEFIDYKDTQLLRKYMTDRGKIKPRRVTGTCTQHQHDIALAIKRA 68
Query: 73 RYLGLIAYV 81
R + L+ Y
Sbjct: 69 REMALLPYT 77
>gi|121602413|ref|YP_988808.1| 30S ribosomal protein S18 [Bartonella bacilliformis KC583]
gi|166220924|sp|A1US55|RS18_BARBK RecName: Full=30S ribosomal protein S18
gi|120614590|gb|ABM45191.1| ribosomal protein S18 [Bartonella bacilliformis KC583]
Length = 82
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+++ L RR + RRK+CP SG +IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSDINQN-LARRPFNRRRKTCPFSGTNVAKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|83945280|ref|ZP_00957629.1| 30S ribosomal protein S18 [Oceanicaulis alexandrii HTCC2633]
gi|83851450|gb|EAP89306.1| 30S ribosomal protein S18 [Oceanicaulis alexandrii HTCC2633]
Length = 84
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MAEVA-PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
MAE++ RR RRK CP SG+ AP+IDYKDI+LL R++S+RGKIVPSRI++VS
Sbjct: 1 MAELSISNVPARRAFQRRRKVCPFSGENAPKIDYKDIKLLQRYMSERGKIVPSRITAVSA 60
Query: 60 KKQRELAKAIKRARYLGLIAY 80
KKQRELA+AIKRAR L L+ Y
Sbjct: 61 KKQRELARAIKRARVLALLPY 81
>gi|312131694|ref|YP_003999034.1| ssu ribosomal protein s18p [Leadbetterella byssophila DSM 17132]
gi|311908240|gb|ADQ18681.1| SSU ribosomal protein S18P [Leadbetterella byssophila DSM 17132]
Length = 84
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R +R+K C G +DYKD L +FL+++GKI+P R++ S K QR +A A+KR
Sbjct: 10 RKEQNRKKYCRFKKLGIKYVDYKDPNFLLKFLNEQGKILPRRLTGNSLKFQRRVAIAVKR 69
Query: 72 ARYLGLIAYV 81
AR+L L+ YV
Sbjct: 70 ARHLALLPYV 79
>gi|255035775|ref|YP_003086396.1| 30S ribosomal protein S18 [Dyadobacter fermentans DSM 18053]
gi|254948531|gb|ACT93231.1| ribosomal protein S18 [Dyadobacter fermentans DSM 18053]
Length = 83
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYK+ L + ++++GKI+P R++ S K QR++++AIKRAR+L
Sbjct: 14 RKKYCRFKKAGIKYIDYKNPDFLLKLVNEQGKILPRRLTGTSLKYQRKVSQAIKRARHLA 73
Query: 77 LIAYV 81
L+ +V
Sbjct: 74 LLPFV 78
>gi|299769499|ref|YP_003731525.1| 30S ribosomal protein S18 [Acinetobacter sp. DR1]
gi|298699587|gb|ADI90152.1| 30S ribosomal protein S18 [Acinetobacter sp. DR1]
Length = 75
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAENVVYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LI Y +
Sbjct: 63 RYLSLIPYTD 72
>gi|225571308|ref|ZP_03780304.1| hypothetical protein CLOHYLEM_07406 [Clostridium hylemonae DSM
15053]
gi|225159784|gb|EEG72403.1| hypothetical protein CLOHYLEM_07406 [Clostridium hylemonae DSM
15053]
Length = 88
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C GK IDYKD+ L +++S+RGKI+P RI+ K QR L AIKRAR++ ++
Sbjct: 25 VCVFCGKENNEIDYKDVAKLRKYISERGKILPRRITGNCAKHQRALTVAIKRARHIAIMP 84
Query: 80 YV 81
YV
Sbjct: 85 YV 86
>gi|119383641|ref|YP_914697.1| 30S ribosomal protein S18 [Paracoccus denitrificans PD1222]
gi|166220967|sp|A1B0F7|RS18_PARDP RecName: Full=30S ribosomal protein S18
gi|119373408|gb|ABL69001.1| SSU ribosomal protein S18P [Paracoccus denitrificans PD1222]
Length = 75
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MANKPFFRRRKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|297621053|ref|YP_003709190.1| 30S ribosomal protein S18 [Waddlia chondrophila WSU 86-1044]
gi|297376354|gb|ADI38184.1| 30S ribosomal protein S18 [Waddlia chondrophila WSU 86-1044]
Length = 88
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K CP + G IDYK+I L++F+++RGKI+P RI+ VS QR L+ AIKRAR
Sbjct: 19 RPRRKKRCPFTTAGVKEIDYKNIEQLSKFITERGKILPRRITGVSAHHQRMLSTAIKRAR 78
Query: 74 YLGLIAYV 81
++ L+ +V
Sbjct: 79 HMALLPFV 86
>gi|296285060|ref|ZP_06863058.1| 30S ribosomal protein S18 [Citromicrobium bathyomarinum JL354]
Length = 74
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP SGK AP IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSGKNAPVIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ YV
Sbjct: 61 KRARHIGLLPYV 72
>gi|258647410|ref|ZP_05734879.1| ribosomal protein S18 [Prevotella tannerae ATCC 51259]
gi|260852778|gb|EEX72647.1| ribosomal protein S18 [Prevotella tannerae ATCC 51259]
Length = 88
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K C G IDYKD L +FL+++GKI+P R++ S K QR +A+A+KRAR L
Sbjct: 18 KRKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRLTGTSLKYQRRVAQAVKRARQL 77
Query: 76 GLIAYVN 82
L+ +V
Sbjct: 78 ALLPFVT 84
>gi|150025893|ref|YP_001296719.1| 30S ribosomal protein S18 [Flavobacterium psychrophilum JIP02/86]
gi|205557707|sp|A6H0P2|RS18_FLAPJ RecName: Full=30S ribosomal protein S18
gi|149772434|emb|CAL43916.1| 30S ribosomal protein S18 [Flavobacterium psychrophilum JIP02/86]
Length = 98
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + + +K C G IDYKD L +F++++GKI+P R++ S K QR+++ A+
Sbjct: 22 LNIDTNKTKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKILPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYV 81
KRAR+L + YV
Sbjct: 82 KRARHLAFMPYV 93
>gi|20809108|ref|NP_624279.1| 30S ribosomal protein S18 [Thermoanaerobacter tengcongensis MB4]
gi|23822145|sp|Q8R6M3|RS18_THETN RecName: Full=30S ribosomal protein S18
gi|20517786|gb|AAM25883.1| Ribosomal protein S18 [Thermoanaerobacter tengcongensis MB4]
Length = 89
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C RIDYKD+ L +++++RGKI+P RI+ + QR+L KAIKRAR + L+
Sbjct: 26 VCAFCADNIDRIDYKDVARLRKYITERGKILPRRITGNCARHQRQLTKAIKRARQIALLP 85
Query: 80 YV 81
Y
Sbjct: 86 YT 87
>gi|258546023|ref|ZP_05706257.1| 50S ribosomal protein L21 [Cardiobacterium hominis ATCC 15826]
gi|258518752|gb|EEV87611.1| 50S ribosomal protein L21 [Cardiobacterium hominis ATCC 15826]
Length = 70
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+SC + +G IDYKD+ L FL++ GKIVP+RI+ + QR+LA AIKRAR+L
Sbjct: 3 RRRSCRFTAEGVKEIDYKDLETLKAFLTETGKIVPARITGTNAFYQRQLATAIKRARFLA 62
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 63 LLPYSD 68
>gi|306820942|ref|ZP_07454562.1| 30S ribosomal protein S18 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551056|gb|EFM39027.1| 30S ribosomal protein S18 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 83
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA+ R+K P +G +IDYKD+ LL +F+S+RGKI+P R++ S K
Sbjct: 1 MADKKQATQNLGFRKRRKKVDPFAGDKINQIDYKDVALLKKFISERGKILPRRVTGTSAK 60
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR+L AIKRAR + L+ Y
Sbjct: 61 AQRKLTNAIKRARIVALLPYT 81
>gi|116667427|pdb|2GY9|R Chain R, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667479|pdb|2GYB|R Chain R, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
Length = 69
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL
Sbjct: 1 RRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLS 60
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 61 LLPYTD 66
>gi|302334831|ref|YP_003800038.1| SSU ribosomal protein S18P [Olsenella uli DSM 7084]
gi|301318671|gb|ADK67158.1| SSU ribosomal protein S18P [Olsenella uli DSM 7084]
Length = 90
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRA
Sbjct: 9 QRQPRRKYCQFCKEDVEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIAVAIKRA 68
Query: 73 RYLGLIAYV 81
R + L+ Y
Sbjct: 69 REMALLPYT 77
>gi|225850831|ref|YP_002731065.1| ribosomal protein S18 [Persephonella marina EX-H1]
gi|225646076|gb|ACO04262.1| ribosomal protein S18 [Persephonella marina EX-H1]
Length = 84
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+PT + R+K C +G +YKD L +F+S+RGKI+P RIS K QR
Sbjct: 6 KSPTAQNKPFFQKRKKYCKFCAEGKEP-NYKDTEYLKQFISERGKIIPRRISGTCGKHQR 64
Query: 64 ELAKAIKRARYLGLIAYV 81
+L IKRAR L L+ YV
Sbjct: 65 KLTVEIKRARQLALLPYV 82
>gi|332983146|ref|YP_004464587.1| 30S ribosomal protein S18P [Mahella australiensis 50-1 BON]
gi|332700824|gb|AEE97765.1| SSU ribosomal protein S18P [Mahella australiensis 50-1 BON]
Length = 85
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C A +IDYKDI L +++++RGKI+P RI+ K QR+L AIKRAR + L
Sbjct: 20 KKVCAFCADKAYQIDYKDINRLKKYVTERGKIIPRRITGNCAKHQRQLTIAIKRARAIAL 79
Query: 78 IAYVN 82
+ Y
Sbjct: 80 LPYTT 84
>gi|238926740|ref|ZP_04658500.1| ribosomal protein S18 [Selenomonas flueggei ATCC 43531]
gi|292670198|ref|ZP_06603624.1| 30S ribosomal protein S18 [Selenomonas noxia ATCC 43541]
gi|304436795|ref|ZP_07396763.1| 30S ribosomal protein S18 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|238885272|gb|EEQ48910.1| ribosomal protein S18 [Selenomonas flueggei ATCC 43531]
gi|292648150|gb|EFF66122.1| 30S ribosomal protein S18 [Selenomonas noxia ATCC 43541]
gi|304370275|gb|EFM23932.1| 30S ribosomal protein S18 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 77
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R RRK C IDYKD L RF ++RGKI+P RIS K QR++ AIKR
Sbjct: 6 RGRKPRRKVCSFCVDKVDHIDYKDAAKLRRFTTERGKILPRRISGNCAKHQRQVTLAIKR 65
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 66 ARNIALLPFT 75
>gi|238925607|ref|YP_002939124.1| 30S ribosomal protein S18 [Eubacterium rectale ATCC 33656]
gi|238877283|gb|ACR76990.1| 30S ribosomal protein S18 [Eubacterium rectale ATCC 33656]
gi|291524157|emb|CBK89744.1| SSU ribosomal protein S18P [Eubacterium rectale DSM 17629]
gi|291527800|emb|CBK93386.1| SSU ribosomal protein S18P [Eubacterium rectale M104/1]
Length = 85
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C G IDYKD L R++S+RGKI+P RI+ K QR L AIKRAR+L L+
Sbjct: 23 VCVFCG-KDNVIDYKDTNKLKRYISERGKILPRRITGNCAKHQRALTVAIKRARHLALMP 81
Query: 80 YV 81
YV
Sbjct: 82 YV 83
>gi|126642217|ref|YP_001085201.1| 30S ribosomal protein S18 [Acinetobacter baumannii ATCC 17978]
gi|169633237|ref|YP_001706973.1| 30S ribosomal protein S18 [Acinetobacter baumannii SDF]
gi|169795503|ref|YP_001713296.1| 30S ribosomal protein S18 [Acinetobacter baumannii AYE]
gi|184158695|ref|YP_001847034.1| 30S ribosomal protein S18 [Acinetobacter baumannii ACICU]
gi|213158557|ref|YP_002319855.1| ribosomal protein S18 [Acinetobacter baumannii AB0057]
gi|215482990|ref|YP_002325195.1| ribosomal protein S18 [Acinetobacter baumannii AB307-0294]
gi|226952676|ref|ZP_03823140.1| 30S ribosomal protein S18 [Acinetobacter sp. ATCC 27244]
gi|239501437|ref|ZP_04660747.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB900]
gi|260549409|ref|ZP_05823628.1| ribosomal protein S18 [Acinetobacter sp. RUH2624]
gi|260554565|ref|ZP_05826786.1| ribosomal protein S18 [Acinetobacter baumannii ATCC 19606]
gi|262372195|ref|ZP_06065474.1| ribosomal protein S18 [Acinetobacter junii SH205]
gi|293609461|ref|ZP_06691763.1| 30S ribosomal protein S18 [Acinetobacter sp. SH024]
gi|294649990|ref|ZP_06727378.1| 30S ribosomal protein S18 [Acinetobacter haemolyticus ATCC 19194]
gi|301345097|ref|ZP_07225838.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB056]
gi|301510831|ref|ZP_07236068.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB058]
gi|301595324|ref|ZP_07240332.1| 30S ribosomal protein S18 [Acinetobacter baumannii AB059]
gi|332850734|ref|ZP_08432981.1| ribosomal protein S18 [Acinetobacter baumannii 6013150]
gi|332866955|ref|ZP_08437281.1| ribosomal protein S18 [Acinetobacter baumannii 6013113]
gi|332873687|ref|ZP_08441630.1| ribosomal protein S18 [Acinetobacter baumannii 6014059]
gi|166220917|sp|A3M6Q5|RS18_ACIBT RecName: Full=30S ribosomal protein S18
gi|226735105|sp|B7H0J9|RS18_ACIB3 RecName: Full=30S ribosomal protein S18
gi|226735106|sp|B7IBC2|RS18_ACIB5 RecName: Full=30S ribosomal protein S18
gi|229470506|sp|B2HUA3|RS18_ACIBC RecName: Full=30S ribosomal protein S18
gi|229470507|sp|B0VM09|RS18_ACIBS RecName: Full=30S ribosomal protein S18
gi|229470508|sp|B0V7G6|RS18_ACIBY RecName: Full=30S ribosomal protein S18
gi|126388101|gb|ABO12599.1| 30S ribosomal protein S18 [Acinetobacter baumannii ATCC 17978]
gi|169148430|emb|CAM86296.1| 30S ribosomal protein S18 [Acinetobacter baumannii AYE]
gi|169152029|emb|CAP00909.1| 30S ribosomal protein S18 [Acinetobacter baumannii]
gi|183210289|gb|ACC57687.1| putative 30S ribosomal protein S18 [Acinetobacter baumannii
ACICU]
gi|213057717|gb|ACJ42619.1| ribosomal protein S18 [Acinetobacter baumannii AB0057]
gi|213989129|gb|ACJ59428.1| ribosomal protein S18 [Acinetobacter baumannii AB307-0294]
gi|226836582|gb|EEH68965.1| 30S ribosomal protein S18 [Acinetobacter sp. ATCC 27244]
gi|260407518|gb|EEX00992.1| ribosomal protein S18 [Acinetobacter sp. RUH2624]
gi|260411107|gb|EEX04404.1| ribosomal protein S18 [Acinetobacter baumannii ATCC 19606]
gi|262312220|gb|EEY93305.1| ribosomal protein S18 [Acinetobacter junii SH205]
gi|292824083|gb|EFF82898.1| 30S ribosomal protein S18 [Acinetobacter haemolyticus ATCC 19194]
gi|292827913|gb|EFF86276.1| 30S ribosomal protein S18 [Acinetobacter sp. SH024]
gi|322507495|gb|ADX02949.1| rpsR [Acinetobacter baumannii 1656-2]
gi|323518609|gb|ADX92990.1| 30S ribosomal protein S18 [Acinetobacter baumannii TCDC-AB0715]
gi|325122723|gb|ADY82246.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus PHEA-2]
gi|332730571|gb|EGJ61887.1| ribosomal protein S18 [Acinetobacter baumannii 6013150]
gi|332734336|gb|EGJ65463.1| ribosomal protein S18 [Acinetobacter baumannii 6013113]
gi|332738075|gb|EGJ68959.1| ribosomal protein S18 [Acinetobacter baumannii 6014059]
Length = 75
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LI Y +
Sbjct: 63 RYLSLIPYTD 72
>gi|329850896|ref|ZP_08265741.1| ribosomal protein S18 [Asticcacaulis biprosthecum C19]
gi|328841211|gb|EGF90782.1| ribosomal protein S18 [Asticcacaulis biprosthecum C19]
Length = 92
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L L+
Sbjct: 28 KVCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQKKQRELAKAIKRARFLALL 87
Query: 79 AYV 81
YV
Sbjct: 88 PYV 90
>gi|284047425|ref|YP_003397764.1| ribosomal protein S18 [Acidaminococcus fermentans DSM 20731]
gi|283951646|gb|ADB46449.1| ribosomal protein S18 [Acidaminococcus fermentans DSM 20731]
Length = 78
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L +F+++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 14 KVCSFCVDKVQEIDYKDAAKLRKFITERGKILPRRISGTCAKHQRQLTIAIKRARNVALL 73
Query: 79 AYV 81
+
Sbjct: 74 PFT 76
>gi|221195118|ref|ZP_03568174.1| ribosomal protein S18 [Atopobium rimae ATCC 49626]
gi|221185021|gb|EEE17412.1| ribosomal protein S18 [Atopobium rimae ATCC 49626]
Length = 90
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRA
Sbjct: 9 QRQPRRKYCQFCKENTEYIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIALAIKRA 68
Query: 73 RYLGLIAYV 81
R + L+ Y
Sbjct: 69 REMALLPYT 77
>gi|15804791|ref|NP_290832.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 EDL933]
gi|12519193|gb|AAG59398.1|AE005652_15 30S ribosomal subunit protein S18 [Escherichia coli O157:H7 str.
EDL933]
Length = 75
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDY+DI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYEDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|253573878|ref|ZP_04851220.1| ribosomal protein S18 [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846355|gb|EES74361.1| ribosomal protein S18 [Paenibacillus sp. oral taxon 786 str. D14]
Length = 89
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD LL +F+S+RGKI+P R++ S K QR L AIKR+R + L+
Sbjct: 26 VCYFTVNKITHIDYKDTELLKKFISERGKILPRRVTGTSAKYQRLLTIAIKRSRQIALLP 85
Query: 80 YVN 82
Y
Sbjct: 86 YTT 88
>gi|293604275|ref|ZP_06686682.1| 30S ribosomal protein S18 [Achromobacter piechaudii ATCC 43553]
gi|311105035|ref|YP_003977888.1| 30S ribosomal protein S18 [Achromobacter xylosoxidans A8]
gi|292817152|gb|EFF76226.1| 30S ribosomal protein S18 [Achromobacter piechaudii ATCC 43553]
gi|310759724|gb|ADP15173.1| ribosomal protein S18 [Achromobacter xylosoxidans A8]
gi|317402865|gb|EFV83407.1| 30S ribosomal protein S18 [Achromobacter xylosoxidans C54]
Length = 90
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 15 QQNPLFKRRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTKAIYQRQLDTAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|260063156|ref|YP_003196236.1| 30S ribosomal protein S18 [Robiginitalea biformata HTCC2501]
gi|88783250|gb|EAR14422.1| ribosomal protein S18 [Robiginitalea biformata HTCC2501]
Length = 98
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L S +K C G IDYKD L + ++++GKI+P R++ S K QR++A+AI
Sbjct: 22 LNIETSKEKKYCRFKKSGIKYIDYKDPDFLMKLVNEQGKILPRRLTGTSLKYQRKVAQAI 81
Query: 70 KRARYLGLIAYVN 82
KR+R+L L+ YV
Sbjct: 82 KRSRHLALMPYVG 94
>gi|28199811|ref|NP_780125.1| 30S ribosomal protein S18 [Xylella fastidiosa Temecula1]
gi|71275195|ref|ZP_00651482.1| Ribosomal protein S18 [Xylella fastidiosa Dixon]
gi|71898275|ref|ZP_00680449.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|71899833|ref|ZP_00681983.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|170731186|ref|YP_001776619.1| 30S ribosomal protein S18 [Xylella fastidiosa M12]
gi|182682563|ref|YP_001830723.1| 30S ribosomal protein S18 [Xylella fastidiosa M23]
gi|32129999|sp|Q87A84|RS18_XYLFT RecName: Full=30S ribosomal protein S18
gi|229560083|sp|B2I9S8|RS18_XYLF2 RecName: Full=30S ribosomal protein S18
gi|229560084|sp|B0U5H1|RS18_XYLFM RecName: Full=30S ribosomal protein S18
gi|28057932|gb|AAO29774.1| 30S ribosomal protein S18 [Xylella fastidiosa Temecula1]
gi|71164004|gb|EAO13719.1| Ribosomal protein S18 [Xylella fastidiosa Dixon]
gi|71730424|gb|EAO32505.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|71732014|gb|EAO34071.1| Ribosomal protein S18 [Xylella fastidiosa Ann-1]
gi|167965979|gb|ACA12989.1| 30S ribosomal protein S18 [Xylella fastidiosa M12]
gi|182632673|gb|ACB93449.1| ribosomal protein S18 [Xylella fastidiosa M23]
gi|307578843|gb|ADN62812.1| 30S ribosomal protein S18 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 76
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKD+ L ++L++ G+IVPSR++ K QR+L A+K A
Sbjct: 3 KFFRRRKFCKFTAEGIKEIDYKDLNTLRQYLTENGRIVPSRVTGTKSKYQRQLTTAVKLA 62
Query: 73 RYLGLIAYVN 82
R+L LI Y +
Sbjct: 63 RFLALIPYTD 72
>gi|297538624|ref|YP_003674393.1| 30S ribosomal protein S18 [Methylotenera sp. 301]
gi|297257971|gb|ADI29816.1| ribosomal protein S18 [Methylotenera sp. 301]
Length = 76
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + RR+ C S +G +DYKD+ LL F+S+ KI+P+R++ + QR+L A+
Sbjct: 1 MAREMYKRRRYCRFSAEGIKEVDYKDVDLLKDFISENAKIIPARMTGTKARYQRQLTTAV 60
Query: 70 KRARYLGLIAYVN 82
K AR+L L+ Y +
Sbjct: 61 KLARFLALLPYTD 73
>gi|322420134|ref|YP_004199357.1| 30S ribosomal protein S18 [Geobacter sp. M18]
gi|320126521|gb|ADW14081.1| ribosomal protein S18 [Geobacter sp. M18]
Length = 93
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIK
Sbjct: 17 KKRPFQRRKVCRFCADKQVSIDYKDPRTLRYFVSERGKIIPRRISGNCSKHQREITEAIK 76
Query: 71 RARYLGLIA 79
RAR + L+
Sbjct: 77 RARNIALLP 85
>gi|258512886|ref|YP_003186320.1| 30S ribosomal protein S18 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479612|gb|ACV59931.1| ribosomal protein S18 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 76
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C DYKD+ L++FL++RGKI+P RI+ + QR++ AIKRAR + L+
Sbjct: 13 VCQYCVDKIDYADYKDVARLSKFLTERGKILPRRITGNCARHQRQVTVAIKRARQVALLP 72
Query: 80 YVN 82
Y
Sbjct: 73 YTT 75
>gi|294677546|ref|YP_003578161.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
gi|6226085|sp|O68127|RS18_RHOCA RecName: Full=30S ribosomal protein S18
gi|3128365|gb|AAC16217.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
gi|294476366|gb|ADE85754.1| 30S ribosomal protein S18 [Rhodobacter capsulatus SB 1003]
Length = 75
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 58/72 (80%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD+RLL R++S+RGKIVP+RI++VS KKQRELA+A
Sbjct: 1 MATKPFFRRRKVCPFSGDNAPKIDYKDVRLLQRYISERGKIVPARITAVSAKKQRELAQA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|49474087|ref|YP_032129.1| 30S ribosomal protein S18 [Bartonella quintana str. Toulouse]
gi|59798702|sp|Q6G061|RS18_BARQU RecName: Full=30S ribosomal protein S18
gi|49239591|emb|CAF25948.1| 30s ribosomal protein s18 [Bartonella quintana str. Toulouse]
Length = 82
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M+E+ T + RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MSEINQT-VTRRPFHRRRKTCPFSGANAPKIDYKDIKLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
+QRELA AIKRAR+LGL+ YV
Sbjct: 60 RQRELANAIKRARFLGLLPYV 80
>gi|270308305|ref|YP_003330363.1| ribosomal protein S18 [Dehalococcoides sp. VS]
gi|270154197|gb|ACZ62035.1| ribosomal protein S18 [Dehalococcoides sp. VS]
Length = 147
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P R + +RK C + RIDYKD L R++S RGKI P R + + QR L
Sbjct: 10 PARGGRGRYTPKRKICSFCAEKVSRIDYKDSAKLARYISDRGKIEPRRRTGTCARHQRAL 69
Query: 66 AKAIKRARYLGLIAYVN 82
A AIKRAR++ L+ +V+
Sbjct: 70 ANAIKRARFIALMPFVS 86
>gi|85058325|ref|YP_454027.1| 30S ribosomal protein S18 [Sodalis glossinidius str. 'morsitans']
gi|123766478|sp|Q2NW53|RS18_SODGM RecName: Full=30S ribosomal protein S18
gi|256032361|pdb|3E1A|K Chain K, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032418|pdb|3E1C|K Chain K, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|84778845|dbj|BAE73622.1| 30S ribosomal protein S18 [Sodalis glossinidius str. 'morsitans']
Length = 75
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRA
Sbjct: 3 RYFRRRKFCRFTTEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|210634873|ref|ZP_03298348.1| hypothetical protein COLSTE_02277 [Collinsella stercoris DSM
13279]
gi|210158588|gb|EEA89559.1| hypothetical protein COLSTE_02277 [Collinsella stercoris DSM
13279]
Length = 88
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C +G IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR
Sbjct: 8 RQPRRKYCQFCKEGTEYIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAR 67
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 68 EMALLPY 74
>gi|325291432|ref|YP_004267613.1| SSU ribosomal protein S18P [Syntrophobotulus glycolicus DSM 8271]
gi|324966833|gb|ADY57612.1| SSU ribosomal protein S18P [Syntrophobotulus glycolicus DSM 8271]
Length = 81
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 4 VAPTPLLR-RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+A P+ + R R++ C IDYKD+ L +++++RGKI+P RIS K Q
Sbjct: 1 MANAPVKKERTRRPRKRVCSFCVDKVTEIDYKDLPKLRKYVTERGKILPRRISGNCAKHQ 60
Query: 63 RELAKAIKRARYLGLIAYV 81
RE+ AIKRAR + L+ YV
Sbjct: 61 REVTIAIKRARSIALLPYV 79
>gi|152983164|ref|YP_001352993.1| 30S ribosomal protein S18 [Janthinobacterium sp. Marseille]
gi|151283241|gb|ABR91651.1| small subunit ribosomal protein S18 [Janthinobacterium sp.
Marseille]
Length = 94
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + R+K C + ++DYKD+ L F+ + GKI+P+R++ QR++ AI
Sbjct: 18 QQNPLFKRKKFCRFTAAHVEQVDYKDVDTLKDFVQENGKIMPARLTGTKAIYQRQVDTAI 77
Query: 70 KRARYLGLIAYVNL 83
KRARYL L+ Y +L
Sbjct: 78 KRARYLALLPYTDL 91
>gi|114777954|ref|ZP_01452868.1| ribosomal protein S18 [Mariprofundus ferrooxydans PV-1]
gi|114551741|gb|EAU54293.1| ribosomal protein S18 [Mariprofundus ferrooxydans PV-1]
Length = 119
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + IDYK+ LL F+++R KI+PSR++ QR L AIKRA
Sbjct: 46 RFQRRRKFCKFCAEKNVTIDYKNPDLLRGFITERYKILPSRVTGTCSSHQRRLTTAIKRA 105
Query: 73 RYLGLIAYVNL 83
R L LI + L
Sbjct: 106 RVLALIPFTPL 116
>gi|323341109|ref|ZP_08081357.1| 30S ribosomal protein S18 [Lactobacillus ruminis ATCC 25644]
gi|323091530|gb|EFZ34154.1| 30S ribosomal protein S18 [Lactobacillus ruminis ATCC 25644]
Length = 78
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 47/74 (63%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P RR RRK ++ IDYKD LL RF+S+RGKI+P R++ S K QR+L
Sbjct: 2 PQQRRGGRRRRKVDFIAANHIEYIDYKDTDLLKRFISERGKILPRRVTGTSAKNQRKLTV 61
Query: 68 AIKRARYLGLIAYV 81
AIKRAR +GL+ +V
Sbjct: 62 AIKRARIMGLLPFV 75
>gi|229825620|ref|ZP_04451689.1| hypothetical protein GCWU000182_00982 [Abiotrophia defectiva ATCC
49176]
gi|229790183|gb|EEP26297.1| hypothetical protein GCWU000182_00982 [Abiotrophia defectiva ATCC
49176]
Length = 92
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + R+K C L+ + +DYKD L +F+S+RGKI+P RI+ S + QR L AIK
Sbjct: 20 RRPMHRRKKVCALTPEELDNLDYKDAAKLKKFISERGKILPRRITGTSARHQRILTTAIK 79
Query: 71 RARYLGLIAYV 81
RAR+L LI YV
Sbjct: 80 RARHLALIPYV 90
>gi|49475325|ref|YP_033366.1| 30S ribosomal protein S18 [Bartonella henselae str. Houston-1]
gi|59798706|sp|Q6G447|RS18_BARHE RecName: Full=30S ribosomal protein S18
gi|49238131|emb|CAF27339.1| 30S ribosomal protein s18 [Bartonella henselae str. Houston-1]
Length = 82
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M E+ T +RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI+++S K
Sbjct: 1 MTEMNQT-AIRRPFHRRRKTCPFSGTNAPKIDYKDIKLLQRYISERGKIVPSRITAISQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA AIKRAR+LGL+ YV
Sbjct: 60 KQRELANAIKRARFLGLLPYV 80
>gi|58336363|ref|YP_192948.1| 30S ribosomal protein S18 [Lactobacillus acidophilus NCFM]
gi|227877549|ref|ZP_03995609.1| 30S ribosomal protein S18 [Lactobacillus crispatus JV-V01]
gi|227893830|ref|ZP_04011635.1| 30S ribosomal protein S18 [Lactobacillus ultunensis DSM 16047]
gi|227902586|ref|ZP_04020391.1| 30S ribosomal protein S18 [Lactobacillus acidophilus ATCC 4796]
gi|256843823|ref|ZP_05549310.1| 30S ribosomal protein S18 [Lactobacillus crispatus 125-2-CHN]
gi|256849622|ref|ZP_05555054.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-1A-US]
gi|262046290|ref|ZP_06019253.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-3A-US]
gi|293380899|ref|ZP_06626935.1| 30S ribosomal protein S18 [Lactobacillus crispatus 214-1]
gi|295691871|ref|YP_003600481.1| 30S ribosomal protein s18 [Lactobacillus crispatus ST1]
gi|312977110|ref|ZP_07788859.1| ribosomal protein S18 [Lactobacillus crispatus CTV-05]
gi|315037239|ref|YP_004030807.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1112]
gi|325955730|ref|YP_004286340.1| 30S ribosomal protein S18 [Lactobacillus acidophilus 30SC]
gi|75507681|sp|Q5FN07|RS18_LACAC RecName: Full=30S ribosomal protein S18
gi|58253680|gb|AAV41917.1| 30S Ribosomal protein S18 [Lactobacillus acidophilus NCFM]
gi|227862848|gb|EEJ70307.1| 30S ribosomal protein S18 [Lactobacillus crispatus JV-V01]
gi|227864319|gb|EEJ71740.1| 30S ribosomal protein S18 [Lactobacillus ultunensis DSM 16047]
gi|227869675|gb|EEJ77096.1| 30S ribosomal protein S18 [Lactobacillus acidophilus ATCC 4796]
gi|256613728|gb|EEU18930.1| 30S ribosomal protein S18 [Lactobacillus crispatus 125-2-CHN]
gi|256713738|gb|EEU28727.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-1A-US]
gi|260573620|gb|EEX30177.1| 30S ribosomal protein S18 [Lactobacillus crispatus MV-3A-US]
gi|290922572|gb|EFD99538.1| 30S ribosomal protein S18 [Lactobacillus crispatus 214-1]
gi|295029977|emb|CBL49456.1| 30S ribosomal protein S18 [Lactobacillus crispatus ST1]
gi|310896438|gb|EFQ45503.1| ribosomal protein S18 [Lactobacillus crispatus CTV-05]
gi|312275372|gb|ADQ58012.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1112]
gi|323465566|gb|ADX69253.1| 30S ribosomal protein S18 [Lactobacillus helveticus H10]
gi|325332295|gb|ADZ06203.1| 30S ribosomal protein S18 [Lactobacillus acidophilus 30SC]
gi|327182558|gb|AEA31005.1| 30S ribosomal protein S18 [Lactobacillus amylovorus GRL 1118]
Length = 78
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +GL+
Sbjct: 13 KVDYIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|117929338|ref|YP_873889.1| 30S ribosomal protein S18 [Acidothermus cellulolyticus 11B]
gi|166220918|sp|A0LWU3|RS18_ACIC1 RecName: Full=30S ribosomal protein S18
gi|117649801|gb|ABK53903.1| SSU ribosomal protein S18P [Acidothermus cellulolyticus 11B]
Length = 78
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +G +DYKD LL +F+S RGKI R++ + QR++A AIK +R + L+
Sbjct: 13 VCVFCKEGITYVDYKDTNLLRKFISDRGKIRARRVTGNCAQHQRDVATAIKNSREMALLP 72
Query: 80 YVN 82
Y N
Sbjct: 73 YTN 75
>gi|83943160|ref|ZP_00955620.1| 30S ribosomal protein S18 [Sulfitobacter sp. EE-36]
gi|83954295|ref|ZP_00963015.1| 30S ribosomal protein S18 [Sulfitobacter sp. NAS-14.1]
gi|163746685|ref|ZP_02154042.1| 30S ribosomal protein S18 [Oceanibulbus indolifex HEL-45]
gi|254486472|ref|ZP_05099677.1| ribosomal protein S18 [Roseobacter sp. GAI101]
gi|83841332|gb|EAP80502.1| 30S ribosomal protein S18 [Sulfitobacter sp. NAS-14.1]
gi|83846168|gb|EAP84045.1| 30S ribosomal protein S18 [Sulfitobacter sp. EE-36]
gi|161379799|gb|EDQ04211.1| 30S ribosomal protein S18 [Oceanibulbus indolifex HEL-45]
gi|214043341|gb|EEB83979.1| ribosomal protein S18 [Roseobacter sp. GAI101]
Length = 75
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPAIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|295133966|ref|YP_003584642.1| 30S ribosomal protein S18 [Zunongwangia profunda SM-A87]
gi|294981981|gb|ADF52446.1| 30S ribosomal protein S18 [Zunongwangia profunda SM-A87]
Length = 99
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L S +K C G IDYKD L F++++GK++P R++ S K QR++A A+
Sbjct: 23 LNIETSKTKKYCRFKRSGIKYIDYKDPDFLMSFVNEQGKLLPRRLTGTSLKYQRKVAVAV 82
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 83 KRARHLALMPYVG 95
>gi|42518093|ref|NP_964023.1| 30S ribosomal protein S18 [Lactobacillus johnsonii NCC 533]
gi|227889149|ref|ZP_04006954.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200]
gi|238853347|ref|ZP_04643727.1| ribosomal protein S18 [Lactobacillus gasseri 202-4]
gi|268318570|ref|YP_003292226.1| ribosomal protein S18 [Lactobacillus johnsonii FI9785]
gi|282852324|ref|ZP_06261666.1| ribosomal protein S18 [Lactobacillus gasseri 224-1]
gi|300362670|ref|ZP_07058846.1| 30S ribosomal protein S18 [Lactobacillus gasseri JV-V03]
gi|59798807|sp|Q74M26|RS18_LACJO RecName: Full=30S ribosomal protein S18
gi|41582377|gb|AAS07989.1| 30S ribosomal protein S19 [Lactobacillus johnsonii NCC 533]
gi|227850378|gb|EEJ60464.1| 30S ribosomal protein S18 [Lactobacillus johnsonii ATCC 33200]
gi|238834035|gb|EEQ26292.1| ribosomal protein S18 [Lactobacillus gasseri 202-4]
gi|262396945|emb|CAX65959.1| ribosomal protein S18 [Lactobacillus johnsonii FI9785]
gi|282556066|gb|EFB61686.1| ribosomal protein S18 [Lactobacillus gasseri 224-1]
gi|300353661|gb|EFJ69533.1| 30S ribosomal protein S18 [Lactobacillus gasseri JV-V03]
gi|329666400|gb|AEB92348.1| 30S ribosomal protein S19 [Lactobacillus johnsonii DPC 6026]
Length = 78
Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIDYIDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTVAIKRARVMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|260575000|ref|ZP_05843001.1| ribosomal protein S18 [Rhodobacter sp. SW2]
gi|259022622|gb|EEW25917.1| ribosomal protein S18 [Rhodobacter sp. SW2]
Length = 75
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 54/72 (75%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD R L R++S+RGKIVPSRI++VS KKQRELA A
Sbjct: 1 MATKPFFRRRKVCPFSGDNAPAIDYKDTRTLQRYISERGKIVPSRITAVSAKKQRELATA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|83949661|ref|ZP_00958394.1| 30S ribosomal protein S18 [Roseovarius nubinhibens ISM]
gi|84503441|ref|ZP_01001501.1| 30S ribosomal protein S18 [Oceanicola batsensis HTCC2597]
gi|83837560|gb|EAP76856.1| 30S ribosomal protein S18 [Roseovarius nubinhibens ISM]
gi|84388228|gb|EAQ01180.1| 30S ribosomal protein S18 [Oceanicola batsensis HTCC2597]
Length = 75
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 58/72 (80%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG+ AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGENAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|332665254|ref|YP_004448042.1| 30S ribosomal protein S18 [Haliscomenobacter hydrossis DSM 1100]
gi|332334068|gb|AEE51169.1| 30S ribosomal protein S18 [Haliscomenobacter hydrossis DSM 1100]
Length = 88
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 1 MAEVAPTPLLRRNV--SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
MA L +R+K C G IDYKD L +F++++GKI+P RI+ S
Sbjct: 1 MANKDDIKFLSNPKIGQNRKKYCRFRKFGIKYIDYKDGDFLLQFINEQGKILPRRITGNS 60
Query: 59 HKKQRELAKAIKRARYLGLIAYV 81
K QR++A A+KRAR+L L+ YV
Sbjct: 61 LKYQRKVATAVKRARHLALLPYV 83
>gi|329116032|ref|ZP_08244749.1| ribosomal protein S18 [Streptococcus parauberis NCFD 2020]
gi|326906437|gb|EGE53351.1| ribosomal protein S18 [Streptococcus parauberis NCFD 2020]
Length = 79
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDFIAANKIEYVDYKDTELLGRFVSERGKILPRRVTGTSAKNQRKVTAAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ YVN
Sbjct: 66 RARVMALMPYVN 77
>gi|313894855|ref|ZP_07828415.1| ribosomal protein S18 [Selenomonas sp. oral taxon 137 str. F0430]
gi|320530237|ref|ZP_08031307.1| ribosomal protein S18 [Selenomonas artemidis F0399]
gi|312976536|gb|EFR41991.1| ribosomal protein S18 [Selenomonas sp. oral taxon 137 str. F0430]
gi|320137670|gb|EFW29582.1| ribosomal protein S18 [Selenomonas artemidis F0399]
Length = 77
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RF ++RGKI+P RIS K QR++ AIKRAR + L+
Sbjct: 13 KVCSFCVDKVDHIDYKDAAKLRRFTTERGKILPRRISGNCAKHQRQVTLAIKRARNIALL 72
Query: 79 AYV 81
+
Sbjct: 73 PFT 75
>gi|269792266|ref|YP_003317170.1| 30S ribosomal protein S18 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099901|gb|ACZ18888.1| ribosomal protein S18 [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 81
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYK+ L +++++RGKI+P R++ K QR+L +AIKRAR L L+
Sbjct: 18 VCHFCVDKVEAVDYKEFDKLRKYVTERGKIIPRRVTGTCAKHQRQLTRAIKRARILALLP 77
Query: 80 YV 81
+
Sbjct: 78 FT 79
>gi|149913883|ref|ZP_01902415.1| 30S ribosomal protein S18 [Roseobacter sp. AzwK-3b]
gi|149812167|gb|EDM71998.1| 30S ribosomal protein S18 [Roseobacter sp. AzwK-3b]
Length = 75
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD +LL R++S+RGKIVPSRI++VS KKQREL++A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPAIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELSRA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|162447065|ref|YP_001620197.1| 30S ribosomal protein S18 [Acholeplasma laidlawii PG-8A]
gi|205556720|sp|A9NEP1|RS18_ACHLI RecName: Full=30S ribosomal protein S18
gi|161985172|gb|ABX80821.1| small subunit ribosomal protein S18 [Acholeplasma laidlawii
PG-8A]
Length = 80
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C + ID+KD LL RF+++RGKI+P R++ S K QR LA AIKRAR
Sbjct: 11 FRKRKKVCFFTQNKFTHIDFKDTELLKRFITERGKILPRRVTGTSAKWQRPLAVAIKRAR 70
Query: 74 YLGLIAYV 81
++ L+ +V
Sbjct: 71 HMALLPFV 78
>gi|194289921|ref|YP_002005828.1| 30S ribosomal protein s18 [Cupriavidus taiwanensis LMG 19424]
gi|229559981|sp|B3R2P5|RS18_CUPTR RecName: Full=30S ribosomal protein S18
gi|193223756|emb|CAQ69763.1| 30S ribosomal protein S18 [Cupriavidus taiwanensis LMG 19424]
Length = 92
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L A
Sbjct: 15 QQQNPLFKRKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTA 74
Query: 69 IKRARYLGLIAYVNL 83
IKRAR+L L+ Y +L
Sbjct: 75 IKRARFLALLPYTDL 89
>gi|161899036|ref|YP_077144.2| 30S ribosomal protein S18 [Symbiobacterium thermophilum IAM
14863]
gi|205620330|sp|Q67J50|RS18_SYMTH RecName: Full=30S ribosomal protein S18
Length = 76
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYKD L R++++RGKI+P RIS + QR+L AIKRAR + L+
Sbjct: 13 VCSFCVDKIEHVDYKDAARLKRYITERGKILPRRISGNCARHQRQLTVAIKRARIMALLP 72
Query: 80 YV 81
+
Sbjct: 73 FT 74
>gi|317503266|ref|ZP_07961321.1| 30S ribosomal protein S18 [Prevotella salivae DSM 15606]
gi|315665623|gb|EFV05235.1| 30S ribosomal protein S18 [Prevotella salivae DSM 15606]
Length = 90
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ ++K C G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR
Sbjct: 19 TRKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQ 78
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 79 IALLPYVT 86
>gi|220927534|ref|YP_002504443.1| 30S ribosomal protein S18 [Clostridium cellulolyticum H10]
gi|219997862|gb|ACL74463.1| ribosomal protein S18 [Clostridium cellulolyticum H10]
Length = 96
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C A IDYKDI + +++S+RGKI+P RIS K QR+L A+KR
Sbjct: 25 RMRRVKKKVCSFCVDKATDIDYKDIAKIRKYVSERGKILPRRISGNCAKHQRQLTVAVKR 84
Query: 72 ARYLGLIAYV 81
AR++ L+ Y
Sbjct: 85 ARHIALLPYT 94
>gi|56697143|ref|YP_167506.1| 30S ribosomal protein S18 [Ruegeria pomeroyi DSS-3]
gi|84684848|ref|ZP_01012748.1| 30S ribosomal protein S18 [Maritimibacter alkaliphilus HTCC2654]
gi|81676223|sp|Q5LR49|RS18_SILPO RecName: Full=30S ribosomal protein S18
gi|56678880|gb|AAV95546.1| ribosomal protein S18 [Ruegeria pomeroyi DSS-3]
gi|84667183|gb|EAQ13653.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2654]
Length = 75
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPKIDYKDTKLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|187777390|ref|ZP_02993863.1| hypothetical protein CLOSPO_00946 [Clostridium sporogenes ATCC
15579]
gi|187774318|gb|EDU38120.1| hypothetical protein CLOSPO_00946 [Clostridium sporogenes ATCC
15579]
Length = 80
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + + IDYKDI L +F+++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 14 KRKVCTFCMEKSEAIDYKDINKLRKFVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 73
Query: 77 LIAYVN 82
L+ +
Sbjct: 74 LLPFTT 79
>gi|320120636|gb|EFE27984.2| 30S ribosomal protein S18 [Filifactor alocis ATCC 35896]
Length = 77
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ NV R+K P +G IDYKD+ LL +++S+RGKI+P R++ S K QR+L A
Sbjct: 3 FQKGNVRKRKKVDPFAGDKINTIDYKDVALLKKYISERGKILPRRVTGTSAKAQRKLTLA 62
Query: 69 IKRARYLGLIAYV 81
IKRAR + L+ Y
Sbjct: 63 IKRARNIALLPYT 75
>gi|161506643|ref|YP_001576591.1| 30S ribosomal protein S18 [Lactobacillus helveticus DPC 4571]
gi|172048334|sp|A8YW49|RS18_LACH4 RecName: Full=30S ribosomal protein S18
gi|160347632|gb|ABX26306.1| 30S ribosomal protein S18 [Lactobacillus helveticus DPC 4571]
gi|328468768|gb|EGF39739.1| 30S ribosomal protein S18 [Lactobacillus helveticus MTCC 5463]
Length = 77
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++A AIKRAR +GL+
Sbjct: 12 KVDYIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLL 71
Query: 79 AYV 81
+V
Sbjct: 72 PFV 74
>gi|126725407|ref|ZP_01741249.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2150]
gi|126704611|gb|EBA03702.1| 30S ribosomal protein S18 [Rhodobacterales bacterium HTCC2150]
Length = 75
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 55/72 (76%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP IDYKD R L R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MANKPFFRRRKVCPFSGDNAPAIDYKDTRTLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|116628692|ref|YP_813864.1| ribosomal protein S18 [Lactobacillus gasseri ATCC 33323]
gi|311111569|ref|ZP_07712966.1| ribosomal protein S18 [Lactobacillus gasseri MV-22]
gi|122274310|sp|Q047E6|RS18_LACGA RecName: Full=30S ribosomal protein S18
gi|116094274|gb|ABJ59426.1| SSU ribosomal protein S18P [Lactobacillus gasseri ATCC 33323]
gi|311066723|gb|EFQ47063.1| ribosomal protein S18 [Lactobacillus gasseri MV-22]
Length = 77
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 12 KVDFIAANHIDYIDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTVAIKRARVMGLL 71
Query: 79 AYV 81
+V
Sbjct: 72 PFV 74
>gi|300857396|ref|YP_003782380.1| 30S ribosomal protein S18 [Clostridium ljungdahlii DSM 13528]
gi|300437511|gb|ADK17278.1| 30S ribosomal protein S18 [Clostridium ljungdahlii DSM 13528]
Length = 85
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ +RK C + IDYKDI L +++++RGKI+P RIS K QREL AIKR
Sbjct: 14 KMRRAKRKVCAFCMDKSEFIDYKDINKLRKYVTERGKILPRRISGNCAKHQRELTVAIKR 73
Query: 72 ARYLGLIAYVN 82
AR + L+ +
Sbjct: 74 ARNIALLPFTT 84
>gi|162455220|ref|YP_001617587.1| hypothetical protein sce6938 [Sorangium cellulosum 'So ce 56']
gi|205617507|sp|A9GXK6|RS18_SORC5 RecName: Full=30S ribosomal protein S18
gi|161165802|emb|CAN97107.1| rpsR [Sorangium cellulosum 'So ce 56']
Length = 106
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + R++ C A IDYKD + L F+S+RGK+VP RIS + QR++ +IKR
Sbjct: 34 RRRTGRKRVCRYCADKALVIDYKDPQALKYFISERGKVVPRRISGNCARHQRKVTLSIKR 93
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 94 ARNIALLPFT 103
>gi|83589003|ref|YP_429012.1| 30S ribosomal protein S18 [Moorella thermoacetica ATCC 39073]
gi|123753003|sp|Q2RM70|RS18_MOOTA RecName: Full=30S ribosomal protein S18
gi|83571917|gb|ABC18469.1| SSU ribosomal protein S18P [Moorella thermoacetica ATCC 39073]
Length = 75
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C ++DYKD+ L R++S+RGKI+P RIS QR+L +AIKRAR L L+
Sbjct: 12 VCSFCVDKIEQVDYKDVNRLRRYISERGKILPRRISGNCAHHQRQLTRAIKRARALALLP 71
Query: 80 YV 81
Y
Sbjct: 72 YT 73
>gi|240850218|ref|YP_002971611.1| 30S ribosomal protein S18 [Bartonella grahamii as4aup]
gi|240267341|gb|ACS50929.1| 30S ribosomal protein S18 [Bartonella grahamii as4aup]
Length = 82
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS KKQRELA AIK
Sbjct: 10 RRPFHRRRKTCPFSGTNAPKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANAIK 69
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 70 RARFLGLLPYV 80
>gi|295099557|emb|CBK88646.1| SSU ribosomal protein S18P [Eubacterium cylindroides T2-87]
Length = 76
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + IDYKD+ LL RF++ GKI+P R++ K QR LAKAI
Sbjct: 3 FKKQRMGRKKVCYFTKNKIKEIDYKDVELLKRFINANGKIIPRRVTGTRAKYQRMLAKAI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYV 74
>gi|172059038|ref|YP_001815498.1| ribosomal protein S18 [Exiguobacterium sibiricum 255-15]
gi|171991559|gb|ACB62481.1| ribosomal protein S18 [Exiguobacterium sibiricum 255-15]
Length = 76
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ LL RF+S+RGKI+P R++ S K QR L AIKR+R + LI
Sbjct: 13 VCYFTSNHITHIDYKDVELLKRFISERGKILPRRVTGTSAKYQRPLTIAIKRSRQMALIP 72
Query: 80 YV 81
YV
Sbjct: 73 YV 74
>gi|307244733|ref|ZP_07526835.1| ribosomal protein S18 [Peptostreptococcus stomatis DSM 17678]
gi|306491910|gb|EFM63961.1| ribosomal protein S18 [Peptostreptococcus stomatis DSM 17678]
Length = 75
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +IDYK+++ L +++++RGKI+P RI+ K QRE+ KAIK AR + L+
Sbjct: 12 VCQFCADKSTKIDYKNVQKLEKYVTERGKILPRRITGTCAKHQREVTKAIKLARNVALLP 71
Query: 80 YV 81
Y
Sbjct: 72 YT 73
>gi|330718016|ref|ZP_08312616.1| 30S ribosomal protein S18 [Leuconostoc fallax KCTC 3537]
Length = 93
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK++ LL RF+S+RGKI+P R++ S K QR++ A+KRAR +GL+
Sbjct: 28 KVDFIAANHIEYIDYKNVELLERFISERGKILPRRVTGTSAKNQRKVTTAVKRARIMGLL 87
Query: 79 AYVN 82
+V
Sbjct: 88 PFVT 91
>gi|328956391|ref|YP_004373777.1| 30S ribosomal protein S18 [Carnobacterium sp. 17-4]
gi|328672715|gb|AEB28761.1| 30S ribosomal protein S18 [Carnobacterium sp. 17-4]
Length = 79
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
RR RRK + +DYKDI LL RF+S+RG+I+P R++ K QR+L KA
Sbjct: 3 QQRRGGKKRRKVDFFAANHIEHVDYKDIDLLKRFISERGRILPRRVTGTYAKNQRKLTKA 62
Query: 69 IKRARYLGLIAYVN 82
IKRAR +GL+ +V
Sbjct: 63 IKRARIMGLLPFVT 76
>gi|256827566|ref|YP_003151525.1| 30S ribosomal protein S18P [Cryptobacterium curtum DSM 15641]
gi|256583709|gb|ACU94843.1| SSU ribosomal protein S18P [Cryptobacterium curtum DSM 15641]
Length = 87
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C +G IDYKD ++L ++++ RGKI P R++ + QR++A A+KRAR +
Sbjct: 8 PRRKYCQFCKEGTEYIDYKDTQMLRKYVTDRGKIKPRRVTGACTQHQRDIANAVKRAREM 67
Query: 76 GLIAY 80
L+ Y
Sbjct: 68 ALMPY 72
>gi|170692294|ref|ZP_02883457.1| ribosomal protein S18 [Burkholderia graminis C4D1M]
gi|307729539|ref|YP_003906763.1| 30S ribosomal protein S18 [Burkholderia sp. CCGE1003]
gi|170142724|gb|EDT10889.1| ribosomal protein S18 [Burkholderia graminis C4D1M]
gi|307584074|gb|ADN57472.1| ribosomal protein S18 [Burkholderia sp. CCGE1003]
Length = 91
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G IDYKDI L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVEYIDYKDIETLKDFIGENGKITPARLTGTKSHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALVPYTD 87
>gi|163755338|ref|ZP_02162458.1| 30S ribosomal protein S18 [Kordia algicida OT-1]
gi|161324758|gb|EDP96087.1| 30S ribosomal protein S18 [Kordia algicida OT-1]
Length = 98
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + +K C G IDYKD L +F++++GK++P R++ S K QR+++ A+
Sbjct: 22 LNIETTKAKKYCRFKKSGIKYIDYKDPDFLLKFVNEQGKLLPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYVG 94
>gi|116513237|ref|YP_812143.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275992|sp|Q04CW7|RS18_LACDB RecName: Full=30S ribosomal protein S18
gi|116092552|gb|ABJ57705.1| SSU ribosomal protein S18P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325124864|gb|ADY84194.1| 30S Ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 78
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++ +DYKD+ LL F+S+RGKI+P R++ S K QR++A AIKRAR +GL+ +V
Sbjct: 17 IAANHIDYVDYKDVDLLKHFISERGKILPRRVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|116619041|ref|YP_819412.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122270759|sp|Q03UT3|RS18_LEUMM RecName: Full=30S ribosomal protein S18
gi|116097888|gb|ABJ63039.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 94
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+
Sbjct: 29 KVDFIAANHIEYIDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMALL 88
Query: 79 AYVN 82
+V
Sbjct: 89 PFVT 92
>gi|294011582|ref|YP_003545042.1| ribosomal protein S18 [Sphingobium japonicum UT26S]
gi|307294384|ref|ZP_07574228.1| ribosomal protein S18 [Sphingobium chlorophenolicum L-1]
gi|292674912|dbj|BAI96430.1| ribosomal protein S18 [Sphingobium japonicum UT26S]
gi|306880535|gb|EFN11752.1| ribosomal protein S18 [Sphingobium chlorophenolicum L-1]
Length = 74
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|15639055|ref|NP_218501.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025295|ref|YP_001933067.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
SS14]
gi|6094164|sp|O83100|RS18_TREPA RecName: Full=30S ribosomal protein S18
gi|229560078|sp|B2S209|RS18_TREPS RecName: Full=30S ribosomal protein S18
gi|3322319|gb|AAC65056.1| ribosomal protein S18 (rpsR) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017870|gb|ACD70488.1| ribosomal protein S18 [Treponema pallidum subsp. pallidum SS14]
gi|291059477|gb|ADD72212.1| 30S ribosomal protein S18 [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 99
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + + +R+K C + DYKD L RF+++RGKI+P RI+ K Q
Sbjct: 19 ESEESAPKKNRQFYRKKVCRFCTQKLLA-DYKDPDTLRRFITERGKILPRRITGTCAKHQ 77
Query: 63 RELAKAIKRARYLGLIAYV 81
R +A +KR+R + L+ +V
Sbjct: 78 RRVALEVKRSRAVALLPFV 96
>gi|52841821|ref|YP_095620.1| 30S ribosomal protein S18 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294365|ref|YP_126780.1| 30S ribosomal protein S18 [Legionella pneumophila str. Lens]
gi|54297504|ref|YP_123873.1| 30S ribosomal protein S18 [Legionella pneumophila str. Paris]
gi|148359128|ref|YP_001250335.1| 30S ribosomal protein S18 [Legionella pneumophila str. Corby]
gi|296107176|ref|YP_003618876.1| rpsR 30S ribosomal protein S18 [Legionella pneumophila 2300/99
Alcoy]
gi|81679230|sp|Q5WWL9|RS18_LEGPL RecName: Full=30S ribosomal protein S18
gi|81679473|sp|Q5X4X1|RS18_LEGPA RecName: Full=30S ribosomal protein S18
gi|81680465|sp|Q5ZV49|RS18_LEGPH RecName: Full=30S ribosomal protein S18
gi|166220957|sp|A5IC89|RS18_LEGPC RecName: Full=30S ribosomal protein S18
gi|52628932|gb|AAU27673.1| 30S ribosomal protein S18 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751289|emb|CAH12700.1| 30S ribosomal subunit protein S18 [Legionella pneumophila str.
Paris]
gi|53754197|emb|CAH15674.1| 30S ribosomal subunit protein S18 [Legionella pneumophila str.
Lens]
gi|148280901|gb|ABQ54989.1| 30S ribosomal protein S18 [Legionella pneumophila str. Corby]
gi|295649077|gb|ADG24924.1| rpsR 30S ribosomal protein S18 [Legionella pneumophila 2300/99
Alcoy]
gi|307610291|emb|CBW99855.1| 30S ribosomal subunit protein S18 [Legionella pneumophila 130b]
Length = 75
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C S +G IDYKDI LL ++++ GKIVPSRI+ + QR+LAKAIK AR
Sbjct: 4 YFRRKKMCRFSAEGGNEIDYKDINLLKNYITETGKIVPSRITGTQTRFQRQLAKAIKHAR 63
Query: 74 YLGLIAYVN 82
++GL+ Y +
Sbjct: 64 FIGLLPYCD 72
>gi|312879778|ref|ZP_07739578.1| SSU ribosomal protein S18P [Aminomonas paucivorans DSM 12260]
gi|310783069|gb|EFQ23467.1| SSU ribosomal protein S18P [Aminomonas paucivorans DSM 12260]
Length = 80
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C R+DYK+ L +++++RGKIVP R++ K QR+L +AIKRAR L L+
Sbjct: 16 KVCHFCVDKVQRVDYKEFEKLRKYVTERGKIVPRRVTGTCAKHQRQLTRAIKRARILALL 75
Query: 79 AYV 81
+
Sbjct: 76 PFT 78
>gi|30248220|ref|NP_840290.1| 30S ribosomal protein S18 [Nitrosomonas europaea ATCC 19718]
gi|30180105|emb|CAD84107.1| Ribosomal protein S18 [Nitrosomonas europaea ATCC 19718]
Length = 92
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R + R+K C + +G IDYKDI LL F+S+ G+I+P+RI+ QR+L A
Sbjct: 17 MANRPLFKRKKFCRFTAEGIKHIDYKDIDLLKDFVSENGRIIPARITGTRAYYQRQLNLA 76
Query: 69 IKRARYLGLIAYVN 82
I+RAR+L L+ Y +
Sbjct: 77 IERARFLALLPYTD 90
>gi|325955201|ref|YP_004238861.1| 30S ribosomal protein S18 [Weeksella virosa DSM 16922]
gi|323437819|gb|ADX68283.1| 30S ribosomal protein S18 [Weeksella virosa DSM 16922]
Length = 100
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C G +DYKD L +F++++GKI+P R + S K QR++++AIKRAR+L L
Sbjct: 32 KKYCRFRKYGIKYVDYKDADFLLQFVNEQGKILPRRYTGTSLKYQRKVSRAIKRARHLAL 91
Query: 78 IAYVN 82
+ +V
Sbjct: 92 LPFVG 96
>gi|326389001|ref|ZP_08210583.1| 30S ribosomal protein S18 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206601|gb|EGD57436.1| 30S ribosomal protein S18 [Novosphingobium nitrogenifigens DSM
19370]
Length = 74
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/72 (68%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQREL++AI
Sbjct: 1 MARPFFRRRKSCPFSGKNAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELSQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|99080885|ref|YP_613039.1| 30S ribosomal protein S18 [Ruegeria sp. TM1040]
gi|126728811|ref|ZP_01744626.1| 30S ribosomal protein S18 [Sagittula stellata E-37]
gi|254460821|ref|ZP_05074237.1| ribosomal protein S18 [Rhodobacterales bacterium HTCC2083]
gi|259418563|ref|ZP_05742480.1| ribosomal protein S18 [Silicibacter sp. TrichCH4B]
gi|123252446|sp|Q1GHT9|RS18_SILST RecName: Full=30S ribosomal protein S18
gi|99037165|gb|ABF63777.1| SSU ribosomal protein S18P [Ruegeria sp. TM1040]
gi|126710741|gb|EBA09792.1| 30S ribosomal protein S18 [Sagittula stellata E-37]
gi|206677410|gb|EDZ41897.1| ribosomal protein S18 [Rhodobacteraceae bacterium HTCC2083]
gi|259344785|gb|EEW56639.1| ribosomal protein S18 [Silicibacter sp. TrichCH4B]
Length = 75
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 58/72 (80%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG+ AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGENAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|197119136|ref|YP_002139563.1| 30S ribosomal protein S18 [Geobacter bemidjiensis Bem]
gi|253700102|ref|YP_003021291.1| 30S ribosomal protein S18 [Geobacter sp. M21]
gi|226735120|sp|B5EHW8|RS18_GEOBB RecName: Full=30S ribosomal protein S18
gi|259494810|sp|C6E504|RS18_GEOSM RecName: Full=30S ribosomal protein S18
gi|197088496|gb|ACH39767.1| ribosomal protein S18 [Geobacter bemidjiensis Bem]
gi|251774952|gb|ACT17533.1| ribosomal protein S18 [Geobacter sp. M21]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK C IDYKD R L F+S+RGKI+P RIS K QRE+ +AIK
Sbjct: 16 KKRPFQRRKVCRFCADKQVTIDYKDPRTLRYFVSERGKIIPRRISGNCSKHQREITEAIK 75
Query: 71 RARYLGLIA 79
RAR + L+
Sbjct: 76 RARNIALLP 84
>gi|110638978|ref|YP_679187.1| 30S ribosomal protein S18 [Cytophaga hutchinsonii ATCC 33406]
gi|122966648|sp|Q11RW9|RS18_CYTH3 RecName: Full=30S ribosomal protein S18
gi|110281659|gb|ABG59845.1| SSU ribosomal protein S18P [Cytophaga hutchinsonii ATCC 33406]
Length = 83
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
V +R+K C G IDYKD L +F++++GKI+P R++ S K QR++++A+KRA
Sbjct: 10 RVENRKKYCRFKKMGIFYIDYKDPNFLLKFVNEQGKILPRRLTGTSLKYQRKVSQAVKRA 69
Query: 73 RYLGLIAYVN 82
R +GL+ YV
Sbjct: 70 RLIGLLPYVT 79
>gi|320109096|ref|YP_004184686.1| 30S ribosomal protein S18 [Terriglobus saanensis SP1PR4]
gi|319927617|gb|ADV84692.1| ribosomal protein S18 [Terriglobus saanensis SP1PR4]
Length = 127
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + +I Y+D+RLL F+++RGKIVP R++ V QR+L+ AIK+
Sbjct: 55 RKFFRRKKVCKFCVEKIDQISYRDVRLLQGFVAERGKIVPRRLTGVCTTHQRQLSLAIKQ 114
Query: 72 ARYLGLIAY 80
AR + L+ +
Sbjct: 115 ARNIALLPF 123
>gi|304392028|ref|ZP_07373970.1| ribosomal protein S18 [Ahrensia sp. R2A130]
gi|303296257|gb|EFL90615.1| ribosomal protein S18 [Ahrensia sp. R2A130]
Length = 82
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M + P RR RRK+CP +G+ AP+IDYKD++LL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVAIEQLP-ARRPFQRRRKTCPFTGENAPKIDYKDVKLLQRYISERGKIVPSRITAVSLK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRELA+AIKRAR+L LI YV
Sbjct: 60 KQRELARAIKRARFLALIPYV 80
>gi|94310915|ref|YP_584125.1| 30S ribosomal protein S18 [Cupriavidus metallidurans CH34]
gi|113868253|ref|YP_726742.1| 30S ribosomal protein S18 [Ralstonia eutropha H16]
gi|122946776|sp|Q0K9E7|RS18_RALEH RecName: Full=30S ribosomal protein S18
gi|122987924|sp|Q1LLX0|RS18_RALME RecName: Full=30S ribosomal protein S18
gi|93354767|gb|ABF08856.1| SSU ribosomal protein S18 [Cupriavidus metallidurans CH34]
gi|113527029|emb|CAJ93374.1| SSU ribosomal protein S18 [Ralstonia eutropha H16]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L A
Sbjct: 15 QQQNPLFKRKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTA 74
Query: 69 IKRARYLGLIAYVNL 83
IKRAR+L L+ Y +L
Sbjct: 75 IKRARFLALMPYTDL 89
>gi|315499768|ref|YP_004088571.1| ribosomal protein s18 [Asticcacaulis excentricus CB 48]
gi|315417780|gb|ADU14420.1| ribosomal protein S18 [Asticcacaulis excentricus CB 48]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRAR+L L+
Sbjct: 28 KVCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQKKQRELAKAIKRARFLALL 87
Query: 79 AYV 81
YV
Sbjct: 88 PYV 90
>gi|86138735|ref|ZP_01057307.1| 30S ribosomal protein S18 [Roseobacter sp. MED193]
gi|126739374|ref|ZP_01755067.1| 30S ribosomal protein S18 [Roseobacter sp. SK209-2-6]
gi|159044730|ref|YP_001533524.1| 30S ribosomal protein S18 [Dinoroseobacter shibae DFL 12]
gi|163736681|ref|ZP_02144100.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis BS107]
gi|163742692|ref|ZP_02150077.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis 2.10]
gi|254463996|ref|ZP_05077407.1| ribosomal protein S18 [Rhodobacterales bacterium Y4I]
gi|254475704|ref|ZP_05089090.1| ribosomal protein S18 [Ruegeria sp. R11]
gi|254511035|ref|ZP_05123102.1| ribosomal protein S18 [Rhodobacteraceae bacterium KLH11]
gi|260433335|ref|ZP_05787306.1| ribosomal protein S18 [Silicibacter lacuscaerulensis ITI-1157]
gi|189029676|sp|A8LQQ6|RS18_DINSH RecName: Full=30S ribosomal protein S18
gi|85824382|gb|EAQ44585.1| 30S ribosomal protein S18 [Roseobacter sp. MED193]
gi|126719474|gb|EBA16183.1| 30S ribosomal protein S18 [Roseobacter sp. SK209-2-6]
gi|157912490|gb|ABV93923.1| 30S ribosomal protein S18 [Dinoroseobacter shibae DFL 12]
gi|161383947|gb|EDQ08331.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis 2.10]
gi|161390551|gb|EDQ14901.1| 30S ribosomal protein S18 [Phaeobacter gallaeciensis BS107]
gi|206684904|gb|EDZ45386.1| ribosomal protein S18 [Rhodobacterales bacterium Y4I]
gi|214029947|gb|EEB70782.1| ribosomal protein S18 [Ruegeria sp. R11]
gi|221534746|gb|EEE37734.1| ribosomal protein S18 [Rhodobacteraceae bacterium KLH11]
gi|260417163|gb|EEX10422.1| ribosomal protein S18 [Silicibacter lacuscaerulensis ITI-1157]
Length = 75
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MAAKPFFRRRKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|78224039|ref|YP_385786.1| 30S ribosomal protein S18 [Geobacter metallireducens GS-15]
gi|123742790|sp|Q39RR3|RS18_GEOMG RecName: Full=30S ribosomal protein S18
gi|78195294|gb|ABB33061.1| SSU ribosomal protein S18P [Geobacter metallireducens GS-15]
Length = 106
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R RRK C IDYKD R+L F+++RGKIVP RIS K QRE+ +AIK
Sbjct: 30 KRRPFQRRKVCRFCADKDLVIDYKDPRVLRSFITERGKIVPRRISGNCSKHQREITEAIK 89
Query: 71 RARYLGLIA 79
RAR + LI
Sbjct: 90 RARNIALIP 98
>gi|270160072|ref|ZP_06188728.1| ribosomal protein S18 [Legionella longbeachae D-4968]
gi|289165147|ref|YP_003455285.1| 30S ribosomal subunit protein S18 [Legionella longbeachae NSW150]
gi|269988411|gb|EEZ94666.1| ribosomal protein S18 [Legionella longbeachae D-4968]
gi|288858320|emb|CBJ12188.1| 30S ribosomal subunit protein S18 [Legionella longbeachae NSW150]
Length = 75
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C S +G IDYKDI LL ++S+ GKIVPSRI+ + QR+LA+AI +AR
Sbjct: 4 YFRRKKMCRFSAEGGNEIDYKDINLLKNYISETGKIVPSRITGTHTRFQRQLARAIMQAR 63
Query: 74 YLGLIAYVN 82
+LGL+ Y +
Sbjct: 64 FLGLLPYCD 72
>gi|213962614|ref|ZP_03390875.1| ribosomal protein S18 [Capnocytophaga sputigena Capno]
gi|256820494|ref|YP_003141773.1| 30S ribosomal protein S18 [Capnocytophaga ochracea DSM 7271]
gi|315223595|ref|ZP_07865450.1| 30S ribosomal protein S18 [Capnocytophaga ochracea F0287]
gi|213954609|gb|EEB65930.1| ribosomal protein S18 [Capnocytophaga sputigena Capno]
gi|256582077|gb|ACU93212.1| ribosomal protein S18 [Capnocytophaga ochracea DSM 7271]
gi|314946511|gb|EFS98505.1| 30S ribosomal protein S18 [Capnocytophaga ochracea F0287]
Length = 92
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + S ++K C G IDYKD L +F++++GK++P R++ S K QR++A A+
Sbjct: 16 LNIDTSKQKKYCRFKKSGIKYIDYKDADFLLKFVNEQGKLLPRRLTGTSLKFQRKVATAV 75
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 76 KRARHLALMPYV 87
>gi|317050838|ref|YP_004111954.1| 30S ribosomal protein S18 [Desulfurispirillum indicum S5]
gi|316945922|gb|ADU65398.1| ribosomal protein S18 [Desulfurispirillum indicum S5]
Length = 123
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + IDYKD++ L F+++R KI P R++ K QR LA AIKR
Sbjct: 51 RRRFGRKKVCAFCAEKVDYIDYKDVKRLRTFITERSKIKPRRMTGTCAKHQRSLATAIKR 110
Query: 72 ARYLGLIAYVNL 83
+R + L+ + L
Sbjct: 111 SRMMALLPFTAL 122
>gi|46447225|ref|YP_008590.1| ribosomal protein S18 [Candidatus Protochlamydia amoebophila
UWE25]
gi|59798733|sp|Q6MAT4|RS18_PARUW RecName: Full=30S ribosomal protein S18
gi|46400866|emb|CAF24315.1| probable ribosomal protein S18 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 86
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
S +RK CP + G IDYKDI L +F+++RGKI+P RI+ VS Q++L AIKRAR
Sbjct: 16 RSKKRKRCPFTAAGIREIDYKDIDTLTKFITERGKILPRRITGVSAYHQKKLTAAIKRAR 75
Query: 74 YLGLIAYV 81
++ L+ +V
Sbjct: 76 HVALLPFV 83
>gi|27379189|ref|NP_770718.1| 30S ribosomal protein S18 [Bradyrhizobium japonicum USDA 110]
gi|59798894|sp|Q89MW4|RS18_BRAJA RecName: Full=30S ribosomal protein S18
gi|27352340|dbj|BAC49343.1| 30S ribosomal protein S18 [Bradyrhizobium japonicum USDA 110]
Length = 79
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRKSCP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKSCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|241895860|ref|ZP_04783156.1| 30S ribosomal protein S18 [Weissella paramesenteroides ATCC
33313]
gi|241870903|gb|EER74654.1| 30S ribosomal protein S18 [Weissella paramesenteroides ATCC
33313]
Length = 80
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ +DYKD LL RF+S+RGKI+P R++ S K QR++ AIKRAR +GL+
Sbjct: 15 KVDFIAANHIEYVDYKDTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMGLL 74
Query: 79 AYV 81
+V
Sbjct: 75 PFV 77
>gi|94497409|ref|ZP_01303979.1| 30S ribosomal protein S18 [Sphingomonas sp. SKA58]
gi|94423040|gb|EAT08071.1| 30S ribosomal protein S18 [Sphingomonas sp. SKA58]
Length = 74
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELASAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+LGL+ Y+
Sbjct: 61 KRARHLGLLPYI 72
>gi|85859721|ref|YP_461923.1| 30S ribosomal protein S18P [Syntrophus aciditrophicus SB]
gi|123725273|sp|Q2LUJ7|RS18_SYNAS RecName: Full=30S ribosomal protein S18
gi|85722812|gb|ABC77755.1| SSU ribosomal protein S18P [Syntrophus aciditrophicus SB]
Length = 88
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ HRRK C +IDYK +L+ ++++RGKI+P RI+ K QREL +AIK
Sbjct: 13 RKKFFHRRKYCKFCSDSTIKIDYKRPDILHDYITERGKIMPRRITGSCSKHQRELTQAIK 72
Query: 71 RARYLGLIAYV 81
RAR + L+ +V
Sbjct: 73 RARSIALLPFV 83
>gi|110680236|ref|YP_683243.1| 30S ribosomal protein S18 [Roseobacter denitrificans OCh 114]
gi|123065436|sp|Q164N6|RS18_ROSDO RecName: Full=30S ribosomal protein S18
gi|109456352|gb|ABG32557.1| ribosomal protein S18 [Roseobacter denitrificans OCh 114]
Length = 75
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MASKPFFRRRKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|304438788|ref|ZP_07398715.1| 30S ribosomal protein S18 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372711|gb|EFM26290.1| 30S ribosomal protein S18 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 74
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R RRK C IDYKD + L RF+S++GKI+P R++ K QRE+ AI
Sbjct: 1 MQRRFRSRRKVCAFCQDPNKVIDYKDSQSLRRFISEKGKILPRRVTGSCAKHQREVTSAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQIALLPY 71
>gi|90960999|ref|YP_534915.1| 30S ribosomal protein S18 [Lactobacillus salivarius UCC118]
gi|227891677|ref|ZP_04009482.1| 30S ribosomal protein S18 [Lactobacillus salivarius ATCC 11741]
gi|301300480|ref|ZP_07206679.1| ribosomal protein S18 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|123270037|sp|Q1WVN7|RS18_LACS1 RecName: Full=30S ribosomal protein S18
gi|90820193|gb|ABD98832.1| SSU ribosomal protein S18P [Lactobacillus salivarius UCC118]
gi|227866480|gb|EEJ73901.1| 30S ribosomal protein S18 [Lactobacillus salivarius ATCC 11741]
gi|300851927|gb|EFK79612.1| ribosomal protein S18 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 78
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDYIAANHIEYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTVAIKRARIMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|39936141|ref|NP_948417.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris CGA009]
gi|192291859|ref|YP_001992464.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris TIE-1]
gi|316933692|ref|YP_004108674.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris DX-1]
gi|59798743|sp|Q6N5A3|RS18_RHOPA RecName: Full=30S ribosomal protein S18; AltName: Full=RRP-S18
gi|229560057|sp|B3Q9T6|RS18_RHOPT RecName: Full=30S ribosomal protein S18
gi|39649995|emb|CAE28519.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris CGA009]
gi|192285608|gb|ACF01989.1| ribosomal protein S18 [Rhodopseudomonas palustris TIE-1]
gi|315601406|gb|ADU43941.1| ribosomal protein S18 [Rhodopseudomonas palustris DX-1]
Length = 79
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|312898031|ref|ZP_07757437.1| ribosomal protein S18 [Megasphaera micronuciformis F0359]
gi|310620856|gb|EFQ04410.1| ribosomal protein S18 [Megasphaera micronuciformis F0359]
Length = 76
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RF ++RGKI+P R+S V K QR+L AIKRAR + L+
Sbjct: 12 KVCNFCVDHIEEIDYKDTAKLRRFTTERGKILPRRVSGVCAKHQRKLTVAIKRARAIALL 71
Query: 79 AYV 81
Y
Sbjct: 72 PYT 74
>gi|281424416|ref|ZP_06255329.1| ribosomal protein S18 [Prevotella oris F0302]
gi|299140845|ref|ZP_07033983.1| ribosomal protein S18 [Prevotella oris C735]
gi|281401685|gb|EFB32516.1| ribosomal protein S18 [Prevotella oris F0302]
gi|298577811|gb|EFI49679.1| ribosomal protein S18 [Prevotella oris C735]
Length = 90
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ ++K C G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR
Sbjct: 19 TRKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQ 78
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 79 IALLPYVT 86
>gi|153872064|ref|ZP_02001064.1| Ribosomal protein S18 [Beggiatoa sp. PS]
gi|152071467|gb|EDN68933.1| Ribosomal protein S18 [Beggiatoa sp. PS]
Length = 75
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + +G IDYKD+ LL ++++ GKIVPSRI+ K QR+LA A+K A
Sbjct: 3 RFFRRKKYCRFTAEGIKEIDYKDLNLLKGYVTETGKIVPSRITGTRTKYQRQLATAVKLA 62
Query: 73 RYLGLIAYVN 82
R+L L+ Y +
Sbjct: 63 RFLALLPYSD 72
>gi|238855514|ref|ZP_04645819.1| ribosomal protein S18 [Lactobacillus jensenii 269-3]
gi|256851682|ref|ZP_05557070.1| ribosomal protein S18 [Lactobacillus jensenii 27-2-CHN]
gi|260661601|ref|ZP_05862513.1| ribosomal protein S18 [Lactobacillus jensenii 115-3-CHN]
gi|260665218|ref|ZP_05866067.1| ribosomal protein S18 [Lactobacillus jensenii SJ-7A-US]
gi|282931540|ref|ZP_06337039.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|282934234|ref|ZP_06339511.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|297205291|ref|ZP_06922687.1| 30S ribosomal protein S18 [Lactobacillus jensenii JV-V16]
gi|313472771|ref|ZP_07813259.1| ribosomal protein S18 [Lactobacillus jensenii 1153]
gi|238831880|gb|EEQ24212.1| ribosomal protein S18 [Lactobacillus jensenii 269-3]
gi|239529058|gb|EEQ68059.1| ribosomal protein S18 [Lactobacillus jensenii 1153]
gi|256615640|gb|EEU20829.1| ribosomal protein S18 [Lactobacillus jensenii 27-2-CHN]
gi|260547658|gb|EEX23636.1| ribosomal protein S18 [Lactobacillus jensenii 115-3-CHN]
gi|260560955|gb|EEX26930.1| ribosomal protein S18 [Lactobacillus jensenii SJ-7A-US]
gi|281301708|gb|EFA93975.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|281304347|gb|EFA96450.1| ribosomal protein S18 [Lactobacillus jensenii 208-1]
gi|297149869|gb|EFH30166.1| 30S ribosomal protein S18 [Lactobacillus jensenii JV-V16]
Length = 78
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P RR RK ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR+L
Sbjct: 2 PQQRRGGRRHRKVDFIAANHIDYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKLTI 61
Query: 68 AIKRARYLGLIAYV 81
AIKRAR +GL+ +V
Sbjct: 62 AIKRARIMGLLPFV 75
>gi|167629778|ref|YP_001680277.1| 30S ribosomal protein s18 [Heliobacterium modesticaldum Ice1]
gi|205558496|sp|B0TE71|RS18_HELMI RecName: Full=30S ribosomal protein S18
gi|167592518|gb|ABZ84266.1| 30S ribosomal protein s18 [Heliobacterium modesticaldum Ice1]
Length = 86
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYK++ L +++++RGKI+P R+S K QR+L AIKRAR++ L+
Sbjct: 22 ICFFCVDKIETVDYKEVGKLRKYITERGKILPRRVSGCCAKHQRQLTNAIKRARHVALLP 81
Query: 80 YV 81
+
Sbjct: 82 FT 83
>gi|163731326|ref|ZP_02138773.1| 30S ribosomal protein S18 [Roseobacter litoralis Och 149]
gi|161394780|gb|EDQ19102.1| 30S ribosomal protein S18 [Roseobacter litoralis Och 149]
Length = 75
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MATKPFFRRRKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|73541692|ref|YP_296212.1| 30S ribosomal protein S18 [Ralstonia eutropha JMP134]
gi|123774065|sp|Q46ZR5|RS181_RALEJ RecName: Full=30S ribosomal protein S18 1
gi|72119105|gb|AAZ61368.1| SSU ribosomal protein S18P [Ralstonia eutropha JMP134]
Length = 92
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R++ C + G +IDYKD+ L F+ GKI P+R++ QR+L A
Sbjct: 15 QQQNPLFKRKRFCRFTVAGVEQIDYKDLDTLKDFIGDNGKITPARLTGTKAHYQRQLDTA 74
Query: 69 IKRARYLGLIAYVNL 83
IKRAR+L L+ Y +L
Sbjct: 75 IKRARFLALMPYTDL 89
>gi|332639079|ref|ZP_08417942.1| 30S ribosomal protein S18 [Weissella cibaria KACC 11862]
Length = 80
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ +DYKD LL RF+S+RGKI+P R++ S K QR++ AIKRAR +GL+
Sbjct: 15 KVDFIAANHIEYVDYKDTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARVMGLL 74
Query: 79 AYV 81
+V
Sbjct: 75 PFV 77
>gi|149184753|ref|ZP_01863071.1| 30S ribosomal protein S18 [Erythrobacter sp. SD-21]
gi|148832073|gb|EDL50506.1| 30S ribosomal protein S18 [Erythrobacter sp. SD-21]
Length = 74
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKNAPAIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|116626134|ref|YP_828290.1| 30S ribosomal protein S18 [Candidatus Solibacter usitatus
Ellin6076]
gi|122251818|sp|Q01QR5|RS18_SOLUE RecName: Full=30S ribosomal protein S18
gi|116229296|gb|ABJ88005.1| SSU ribosomal protein S18P [Candidatus Solibacter usitatus
Ellin6076]
Length = 99
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ R+K C + I+YKD+++L+ F+++RGKIVP RIS V QR L AI
Sbjct: 25 QKKQYFRRKKVCRFCVEKIDDINYKDVKMLHAFVAERGKIVPRRISGVCAPHQRRLTDAI 84
Query: 70 KRARYLGLIAY 80
K+AR + L+ +
Sbjct: 85 KKARNIALLPF 95
>gi|302390766|ref|YP_003826587.1| SSU ribosomal protein S18P [Thermosediminibacter oceani DSM
16646]
gi|302201394|gb|ADL08964.1| SSU ribosomal protein S18P [Thermosediminibacter oceani DSM
16646]
Length = 74
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD+ L +F+++R KI+P RI+ + QR+L AIKRAR + L+
Sbjct: 11 VCSFCMDKIDYIDYKDVARLRKFITERAKILPRRITGNCARHQRQLTVAIKRARNIALLP 70
Query: 80 YVN 82
+ +
Sbjct: 71 FTS 73
>gi|163868014|ref|YP_001609218.1| 30S ribosomal protein S18 [Bartonella tribocorum CIP 105476]
gi|189029667|sp|A9IRU1|RS18_BART1 RecName: Full=30S ribosomal protein S18
gi|161017665|emb|CAK01223.1| 30S ribosomal protein S18 [Bartonella tribocorum CIP 105476]
Length = 82
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP SG AP+IDYKDI+LL R++S+RGKIVPSRI++VS KKQRELA AIK
Sbjct: 10 RRPFHRRRKTCPFSGATAPKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANAIK 69
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 70 RARFLGLLPYV 80
>gi|198284526|ref|YP_002220847.1| 30S ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666634|ref|YP_002427193.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249047|gb|ACH84640.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518847|gb|ACK79433.1| ribosomal protein S18 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 92
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
N + RRK C +G IDYKD++ L ++ + GKIVPSRI+ S+ QR+L AIKRA
Sbjct: 22 NFTRRRKFCRFRAEGVKEIDYKDLKTLQAYVGETGKIVPSRITGTSNLYQRQLTTAIKRA 81
Query: 73 RYLGLIAYV 81
R+L L+ YV
Sbjct: 82 RFLALLPYV 90
>gi|121535339|ref|ZP_01667151.1| ribosomal protein S18 [Thermosinus carboxydivorans Nor1]
gi|121306031|gb|EAX46961.1| ribosomal protein S18 [Thermosinus carboxydivorans Nor1]
Length = 76
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C R+DYKD+ L RF+++RGKI+P RIS + QR+L AIKR
Sbjct: 5 RGRKPKKKVCSFCVDKIERVDYKDVPRLRRFITERGKILPRRISGNCARHQRQLTLAIKR 64
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 65 ARNMALLPFT 74
>gi|302393056|ref|YP_003828876.1| 30S ribosomal protein S18P [Acetohalobium arabaticum DSM 5501]
gi|302205133|gb|ADL13811.1| SSU ribosomal protein S18P [Acetohalobium arabaticum DSM 5501]
Length = 71
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RKSC IDYK++ L+++L+ RGKIVP RIS + QR+L KAIKRAR + L
Sbjct: 6 RKSCEFCANKIDHIDYKEVNKLDKYLTDRGKIVPRRISGNCARHQRQLTKAIKRARSIAL 65
Query: 78 IAYV 81
+ +
Sbjct: 66 LPFT 69
>gi|170016529|ref|YP_001727448.1| ribosomal protein S18 [Leuconostoc citreum KM20]
gi|326693086|ref|ZP_08230091.1| 30S ribosomal protein S18 [Leuconostoc argentinum KCTC 3773]
gi|229560045|sp|B1MWV2|RS18_LEUCK RecName: Full=30S ribosomal protein S18
gi|169803386|gb|ACA82004.1| Ribosomal protein S18 [Leuconostoc citreum KM20]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+
Sbjct: 29 KVDYIAANHIEFIDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAIKRARIMALL 88
Query: 79 AYVN 82
+V
Sbjct: 89 PFVT 92
>gi|91783365|ref|YP_558571.1| 30S ribosomal protein S18 [Burkholderia xenovorans LB400]
gi|296157726|ref|ZP_06840560.1| ribosomal protein S18 [Burkholderia sp. Ch1-1]
gi|123168536|sp|Q13ZH0|RS18_BURXL RecName: Full=30S ribosomal protein S18
gi|91687319|gb|ABE30519.1| SSU ribosomal protein S18P [Burkholderia xenovorans LB400]
gi|295891972|gb|EFG71756.1| ribosomal protein S18 [Burkholderia sp. Ch1-1]
Length = 91
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + G IDYKD+ L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAAGVDHIDYKDLETLKDFIGENGKITPARLTGTKSHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALVPYTD 87
>gi|87199436|ref|YP_496693.1| 30S ribosomal protein S18 [Novosphingobium aromaticivorans DSM
12444]
gi|123763556|sp|Q2G8G4|RS18_NOVAD RecName: Full=30S ribosomal protein S18
gi|87135117|gb|ABD25859.1| SSU ribosomal protein S18P [Novosphingobium aromaticivorans DSM
12444]
Length = 74
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQREL++AI
Sbjct: 1 MARPFFRRRKSCPFSGKNAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELSQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|227432792|ref|ZP_03914755.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351461|gb|EEJ41724.1| SSU ribosomal protein S18P [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+
Sbjct: 29 KVDFIAANHIEYIDYKNTELLERFISERGKILPRRLTGTSAKNQRKVTTAIKRARIMALL 88
Query: 79 AYVN 82
+V
Sbjct: 89 PFVT 92
>gi|254520716|ref|ZP_05132772.1| ribosomal protein S18 [Clostridium sp. 7_2_43FAA]
gi|226914465|gb|EEH99666.1| ribosomal protein S18 [Clostridium sp. 7_2_43FAA]
Length = 80
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++ + +RR+ +RK C + A IDYKDI L +F+++RGKI+P RIS K
Sbjct: 1 MKDMKRSGKMRRS---KRKVCAFCVEKAEAIDYKDITKLRKFVTERGKILPRRISGTCAK 57
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QREL AIKR+R + L+ +
Sbjct: 58 HQRELTTAIKRSRNIALLPFTT 79
>gi|164686462|ref|ZP_02210490.1| hypothetical protein CLOBAR_00027 [Clostridium bartlettii DSM
16795]
gi|164604473|gb|EDQ97938.1| hypothetical protein CLOBAR_00027 [Clostridium bartlettii DSM
16795]
Length = 75
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C RIDYK+ + L +++++RGKI+P RIS K QREL AIKRAR L L+
Sbjct: 12 VCQFCASKDARIDYKNTQRLQKYITERGKILPRRISGTCAKHQRELTVAIKRARNLALLP 71
Query: 80 YV 81
Y
Sbjct: 72 YT 73
>gi|209559923|ref|YP_002286395.1| 30S ribosomal protein S18 [Streptococcus pyogenes NZ131]
gi|238058158|sp|B5XI38|RS18_STRPZ RecName: Full=30S ribosomal protein S18
gi|209541124|gb|ACI61700.1| SSU ribosomal protein S18p [Streptococcus pyogenes NZ131]
Length = 79
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL+RF+S+RGKI+P R+ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDFIAANKIEYVDYKDTELLSRFVSERGKILPRRVPGTSAKNQRKVTTAIK 65
Query: 71 RARYLGLIAYVN 82
RAR + L+ YVN
Sbjct: 66 RARVMALMPYVN 77
>gi|291614206|ref|YP_003524363.1| ribosomal protein S18 [Sideroxydans lithotrophicus ES-1]
gi|291584318|gb|ADE11976.1| ribosomal protein S18 [Sideroxydans lithotrophicus ES-1]
Length = 89
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + RRK C + + +DYKDI +L F+++ GK++P+RI+ + QR+L+ A+KR
Sbjct: 17 RQLFKRRKFCRFTAEKIAEVDYKDINILKEFITENGKLIPARITGTKTRFQRQLSVAVKR 76
Query: 72 ARYLGLIAYVNL 83
AR+L L+ Y +L
Sbjct: 77 ARFLALLPYTDL 88
>gi|89897780|ref|YP_521267.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense Y51]
gi|219670929|ref|YP_002461364.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense DCB-2]
gi|123091592|sp|Q24MB9|RS18_DESHY RecName: Full=30S ribosomal protein S18
gi|89337228|dbj|BAE86823.1| 30S ribosomal protein S18 [Desulfitobacterium hafniense Y51]
gi|219541189|gb|ACL22928.1| ribosomal protein S18 [Desulfitobacterium hafniense DCB-2]
Length = 76
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD + +++++RGKI+P RIS K QR++ AIKRAR++ L+
Sbjct: 13 VCSFCVDKVESIDYKDTHKIRKYITERGKILPRRISGNCAKHQRQVTVAIKRARHIALLP 72
Query: 80 YV 81
Y+
Sbjct: 73 YI 74
>gi|289422550|ref|ZP_06424393.1| ribosomal protein S18 [Peptostreptococcus anaerobius 653-L]
gi|289157122|gb|EFD05744.1| ribosomal protein S18 [Peptostreptococcus anaerobius 653-L]
Length = 75
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +IDYK+ + L +F+++RGKI+P RI+ K QREL KAIK AR + L+
Sbjct: 12 VCQFCADKNTKIDYKNYQKLEKFVTERGKILPRRITGTCAKHQRELTKAIKMARNIALLP 71
Query: 80 YV 81
Y
Sbjct: 72 YT 73
>gi|258405219|ref|YP_003197961.1| 30S ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
gi|257797446|gb|ACV68383.1| ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR R+K C +DYK+I LL F++ RGKI+ RI+ K QR+L + I
Sbjct: 3 FRRKFRPRKKVCRFCQDNELNLDYKNIELLQDFVTARGKIIARRITGTCAKHQRQLTREI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y
Sbjct: 63 KRARQMALLYYTT 75
>gi|255535655|ref|YP_003096026.1| SSU ribosomal protein S18p [Flavobacteriaceae bacterium 3519-10]
gi|255341851|gb|ACU07964.1| SSU ribosomal protein S18p [Flavobacteriaceae bacterium 3519-10]
Length = 100
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+EV L N +K C G +DYKD L +F++++GKI+P R + S K
Sbjct: 16 SEVKFLTPLDINTKTDKKYCRFKKYGIKHVDYKDANFLLQFVNEQGKILPRRYTGTSLKY 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR+++ AIKRAR+L ++ YV
Sbjct: 76 QRKVSAAIKRARHLAMMPYV 95
>gi|297618489|ref|YP_003703648.1| ribosomal protein S18 [Syntrophothermus lipocalidus DSM 12680]
gi|297146326|gb|ADI03083.1| ribosomal protein S18 [Syntrophothermus lipocalidus DSM 12680]
Length = 74
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + IDYKD L R++++RGKI+P RI+ K QR L AIKRAR + L+ +
Sbjct: 12 CNFCAEKIENIDYKDAARLRRYITERGKILPRRITGNCAKHQRRLTTAIKRAREMALLPF 71
Query: 81 V 81
Sbjct: 72 T 72
>gi|22124560|ref|NP_667983.1| 30S ribosomal protein S18 [Yersinia pestis KIM 10]
gi|45440398|ref|NP_991937.1| 30S ribosomal protein S18 [Yersinia pestis biovar Microtus str.
91001]
gi|51594792|ref|YP_068983.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 32953]
gi|108806085|ref|YP_650001.1| 30S ribosomal protein S18 [Yersinia pestis Antiqua]
gi|108813441|ref|YP_649208.1| 30S ribosomal protein S18 [Yersinia pestis Nepal516]
gi|123440775|ref|YP_001004767.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145600833|ref|YP_001164909.1| 30S ribosomal protein S18 [Yersinia pestis Pestoides F]
gi|153949310|ref|YP_001402591.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 31758]
gi|153997314|ref|ZP_02022414.1| 30S ribosomal protein S18 [Yersinia pestis CA88-4125]
gi|157368695|ref|YP_001476684.1| 30S ribosomal protein S18 [Serratia proteamaculans 568]
gi|162420420|ref|YP_001605262.1| 30S ribosomal protein S18 [Yersinia pestis Angola]
gi|165928152|ref|ZP_02223984.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937415|ref|ZP_02225978.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011310|ref|ZP_02232208.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213997|ref|ZP_02240032.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401213|ref|ZP_02306713.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420501|ref|ZP_02312254.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423736|ref|ZP_02315489.1| ribosomal protein S18 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170025997|ref|YP_001722502.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis YPIII]
gi|186893801|ref|YP_001870913.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis PB1/+]
gi|218930551|ref|YP_002348426.1| 30S ribosomal protein S18 [Yersinia pestis CO92]
gi|229836651|ref|ZP_04456817.1| 30S ribosomal subunit protein S18 [Yersinia pestis Pestoides A]
gi|229839191|ref|ZP_04459350.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899755|ref|ZP_04514896.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903917|ref|ZP_04519030.1| 30S ribosomal subunit protein S18 [Yersinia pestis Nepal516]
gi|238750086|ref|ZP_04611589.1| 30S ribosomal protein S18 [Yersinia rohdei ATCC 43380]
gi|238787555|ref|ZP_04631353.1| 30S ribosomal protein S18 [Yersinia frederiksenii ATCC 33641]
gi|238792979|ref|ZP_04636608.1| 30S ribosomal protein S18 [Yersinia intermedia ATCC 29909]
gi|261342859|ref|ZP_05970717.1| ribosomal protein S18 [Enterobacter cancerogenus ATCC 35316]
gi|270265016|ref|ZP_06193279.1| 30S ribosomal protein S18 [Serratia odorifera 4Rx13]
gi|270489093|ref|ZP_06206167.1| ribosomal protein S18 [Yersinia pestis KIM D27]
gi|304396940|ref|ZP_07378820.1| ribosomal protein S18 [Pantoea sp. aB]
gi|308188253|ref|YP_003932384.1| 30S ribosomal protein S18 [Pantoea vagans C9-1]
gi|311281252|ref|YP_003943483.1| ribosomal protein S18 [Enterobacter cloacae SCF1]
gi|322831171|ref|YP_004211198.1| ribosomal protein S18 [Rahnella sp. Y9602]
gi|332160037|ref|YP_004296614.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|20978696|sp|Q8ZB83|RS18_YERPE RecName: Full=30S ribosomal protein S18
gi|59798666|sp|Q66FA0|RS18_YERPS RecName: Full=30S ribosomal protein S18
gi|122979828|sp|Q1CBW6|RS18_YERPA RecName: Full=30S ribosomal protein S18
gi|123246216|sp|Q1CEH2|RS18_YERPN RecName: Full=30S ribosomal protein S18
gi|166222257|sp|A1JIT0|RS18_YERE8 RecName: Full=30S ribosomal protein S18
gi|166222258|sp|A4TRM4|RS18_YERPP RecName: Full=30S ribosomal protein S18
gi|167011194|sp|A8G8W6|RS18_SERP5 RecName: Full=30S ribosomal protein S18
gi|167011195|sp|A7FMW3|RS18_YERP3 RecName: Full=30S ribosomal protein S18
gi|229560085|sp|B2K2L5|RS18_YERPB RecName: Full=30S ribosomal protein S18
gi|229560086|sp|A9QYL4|RS18_YERPG RecName: Full=30S ribosomal protein S18
gi|229560087|sp|B1JMM2|RS18_YERPY RecName: Full=30S ribosomal protein S18
gi|21957360|gb|AAM84234.1|AE013667_7 30S ribosomal subunit protein S18 [Yersinia pestis KIM 10]
gi|45435255|gb|AAS60814.1| 30S ribosomal protein S18 [Yersinia pestis biovar Microtus str.
91001]
gi|51588074|emb|CAH19680.1| 30S ribosomal protein S18 [Yersinia pseudotuberculosis IP 32953]
gi|108777089|gb|ABG19608.1| SSU ribosomal protein S18P [Yersinia pestis Nepal516]
gi|108777998|gb|ABG12056.1| SSU ribosomal protein S18P [Yersinia pestis Antiqua]
gi|115349162|emb|CAL22125.1| 30S ribosomal protein S18 [Yersinia pestis CO92]
gi|122087736|emb|CAL10521.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145212529|gb|ABP41936.1| 30S ribosomal protein S18 [Yersinia pestis Pestoides F]
gi|149288951|gb|EDM39031.1| 30S ribosomal protein S18 [Yersinia pestis CA88-4125]
gi|152960805|gb|ABS48266.1| ribosomal protein S18 [Yersinia pseudotuberculosis IP 31758]
gi|157320459|gb|ABV39556.1| ribosomal protein S18 [Serratia proteamaculans 568]
gi|162353235|gb|ABX87183.1| ribosomal protein S18 [Yersinia pestis Angola]
gi|165914520|gb|EDR33134.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
IP275]
gi|165919839|gb|EDR37140.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989694|gb|EDR41995.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204792|gb|EDR49272.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961307|gb|EDR57328.1| ribosomal protein S18 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049238|gb|EDR60646.1| ribosomal protein S18 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057906|gb|EDR67652.1| ribosomal protein S18 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752531|gb|ACA70049.1| ribosomal protein S18 [Yersinia pseudotuberculosis YPIII]
gi|186696827|gb|ACC87456.1| ribosomal protein S18 [Yersinia pseudotuberculosis PB1/+]
gi|229679687|gb|EEO75790.1| 30S ribosomal subunit protein S18 [Yersinia pestis Nepal516]
gi|229687247|gb|EEO79322.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695557|gb|EEO85604.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706335|gb|EEO92343.1| 30S ribosomal subunit protein S18 [Yersinia pestis Pestoides A]
gi|238711630|gb|EEQ03845.1| 30S ribosomal protein S18 [Yersinia rohdei ATCC 43380]
gi|238724342|gb|EEQ15984.1| 30S ribosomal protein S18 [Yersinia frederiksenii ATCC 33641]
gi|238727579|gb|EEQ19104.1| 30S ribosomal protein S18 [Yersinia intermedia ATCC 29909]
gi|270040950|gb|EFA14051.1| 30S ribosomal protein S18 [Serratia odorifera 4Rx13]
gi|270337597|gb|EFA48374.1| ribosomal protein S18 [Yersinia pestis KIM D27]
gi|288314902|gb|EFC53840.1| ribosomal protein S18 [Enterobacter cancerogenus ATCC 35316]
gi|304355736|gb|EFM20103.1| ribosomal protein S18 [Pantoea sp. aB]
gi|308058763|gb|ADO10935.1| 30S ribosomal protein S18 [Pantoea vagans C9-1]
gi|308750447|gb|ADO50199.1| ribosomal protein S18 [Enterobacter cloacae SCF1]
gi|318607403|emb|CBY28901.1| SSU ribosomal protein S18p [Yersinia enterocolitica subsp.
palearctica Y11]
gi|320013741|gb|ADV97312.1| 30S ribosomal subunit protein S18 [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|321166372|gb|ADW72071.1| ribosomal protein S18 [Rahnella sp. Y9602]
gi|325664267|gb|ADZ40911.1| 30S ribosomal protein S18 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862079|emb|CBX72245.1| 30S ribosomal protein S18 [Yersinia enterocolitica W22703]
Length = 75
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRA
Sbjct: 3 RYFRRRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARCIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|167773044|ref|ZP_02445097.1| hypothetical protein ANACOL_04433 [Anaerotruncus colihominis DSM
17241]
gi|167664977|gb|EDS09107.1| hypothetical protein ANACOL_04433 [Anaerotruncus colihominis DSM
17241]
Length = 86
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R N R+K C IDYKD+ L R+LS+R KIVP R++ + QR+L AIK
Sbjct: 14 RGNRKGRKKVCAFCVDKLGPIDYKDVPRLRRYLSERAKIVPRRVTGTCARHQRQLTLAIK 73
Query: 71 RARYLGLIAYVN 82
RAR++GL+ Y++
Sbjct: 74 RARHIGLLPYIS 85
>gi|229496127|ref|ZP_04389848.1| ribosomal protein S18 [Porphyromonas endodontalis ATCC 35406]
gi|229316958|gb|EEN82870.1| ribosomal protein S18 [Porphyromonas endodontalis ATCC 35406]
Length = 90
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S+++K C G IDYKD L +FL+++G+I+P RI+ S K QR +A+A+KRAR+
Sbjct: 19 SNKKKYCRFKKSGIKYIDYKDPEFLKKFLNEQGRILPRRITGTSLKFQRRIARAVKRARH 78
Query: 75 LGLIAYVN 82
L L+ +V
Sbjct: 79 LALLPFVT 86
>gi|296111019|ref|YP_003621400.1| 30S ribosomal protein S18 [Leuconostoc kimchii IMSNU 11154]
gi|295832550|gb|ADG40431.1| 30S ribosomal protein S18 [Leuconostoc kimchii IMSNU 11154]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK+ LL RF+S+RGKI+P R++ S K QR++ A+KRAR + L+
Sbjct: 29 KVDFIAANHIEYIDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTTAVKRARIMALL 88
Query: 79 AYVN 82
+V
Sbjct: 89 PFVT 92
>gi|228473999|ref|ZP_04058740.1| ribosomal protein S18 [Capnocytophaga gingivalis ATCC 33624]
gi|326336347|ref|ZP_08202518.1| 30S ribosomal protein S18 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|228274513|gb|EEK13354.1| ribosomal protein S18 [Capnocytophaga gingivalis ATCC 33624]
gi|325691521|gb|EGD33489.1| 30S ribosomal protein S18 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 97
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + + +K C G IDYKD L +F++++GK++P RI+ S K QR++A A+
Sbjct: 21 LNIDTNKNKKYCRFKKLGIKYIDYKDPDFLLKFINEQGKLLPRRITGTSLKFQRKIAVAV 80
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 81 KRARHLALLPYV 92
>gi|332704307|ref|ZP_08424395.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554456|gb|EGJ51500.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis
Bay]
Length = 86
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R + R+K C IDYK+ LL F++ RGKI+ RI+ K QR L AI
Sbjct: 3 FKRRFAPRKKYCRFCADKNVAIDYKNADLLRDFITDRGKIIARRITGTCAKHQRRLTTAI 62
Query: 70 KRARYLGLIAYVN 82
KR+R + L+ Y
Sbjct: 63 KRSRQMALLFYTT 75
>gi|325981281|ref|YP_004293683.1| 30S ribosomal protein S18 [Nitrosomonas sp. AL212]
gi|325530800|gb|ADZ25521.1| ribosomal protein S18 [Nitrosomonas sp. AL212]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + R+K C + +G ++DYKDI +L F+S+ GK++P+RI+ + QR+L AI+
Sbjct: 21 NRPLFKRKKFCRFTAEGIKQVDYKDIEILKDFISENGKVIPARITGTTSFYQRQLGTAIE 80
Query: 71 RARYLGLIAYVN 82
RAR+L L+ Y +
Sbjct: 81 RARFLALLPYTD 92
>gi|91977454|ref|YP_570113.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisB5]
gi|123721763|sp|Q135M7|RS18_RHOPS RecName: Full=30S ribosomal protein S18
gi|91683910|gb|ABE40212.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisB5]
Length = 79
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGTNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|110003930|emb|CAK98270.1| 30s ribosomal protein s18 [Spiroplasma citri]
Length = 74
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ +K C + IDYKD+ LL +F+S G+I+P R++ + K QR LA AI
Sbjct: 1 MNPKFKRFKKQCYFTKNKITYIDYKDVELLKKFISGNGQILPKRVTGTTAKNQRMLATAI 60
Query: 70 KRARYLGLIAYV 81
KRAR + L+ +V
Sbjct: 61 KRARQMALLPFV 72
>gi|42527183|ref|NP_972281.1| 30S ribosomal protein S18 [Treponema denticola ATCC 35405]
gi|59798792|sp|Q73M34|RS18_TREDE RecName: Full=30S ribosomal protein S18
gi|41817607|gb|AAS12192.1| ribosomal protein S18 [Treponema denticola ATCC 35405]
Length = 89
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R+K C + IDYK+ L RF+++RGKI+P RI+ K QR+LA IKRAR
Sbjct: 21 FYRKKVCRFCAQKVK-IDYKEPDALRRFITERGKILPRRITGTCAKHQRKLAVEIKRARA 79
Query: 75 LGLIAYV 81
+ L+ +V
Sbjct: 80 VALLPFV 86
>gi|332881934|ref|ZP_08449576.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680169|gb|EGJ53124.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 92
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + S ++K C G IDYKD L +F++++GK++P R++ S K QR++A A+
Sbjct: 16 LNIDTSKQKKYCRFKKLGIKYIDYKDADFLLKFVNEQGKLLPRRLTGTSLKFQRKVATAV 75
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 76 KRARHLALMPYV 87
>gi|146328891|ref|YP_001210004.1| 30S ribosomal protein S18 [Dichelobacter nodosus VCS1703A]
gi|205557281|sp|A5EXN0|RS18_DICNV RecName: Full=30S ribosomal protein S18
gi|146232361|gb|ABQ13339.1| 30S ribosomal protein S18 [Dichelobacter nodosus VCS1703A]
Length = 71
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ R++ C + +G IDYKD+ L ++++ GKIVP+RI+ + QR+LA A+KRAR
Sbjct: 1 MARRKRICRFTAEGVKEIDYKDLETLKAYITEVGKIVPARITGTNVFYQRQLATAVKRAR 60
Query: 74 YLGLIAYVN 82
+L L+ Y +
Sbjct: 61 FLALLPYTD 69
>gi|114768974|ref|ZP_01446600.1| 30S ribosomal protein S18 [alpha proteobacterium HTCC2255]
gi|114549891|gb|EAU52772.1| 30S ribosomal protein S18 [alpha proteobacterium HTCC2255]
Length = 75
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKSCP G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELAKA
Sbjct: 1 MANKPFFRRRKSCPFLGDNAPKIDYKDTKLLQRYVSERGKIVPSRITAVSAKKQRELAKA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|86749583|ref|YP_486079.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris HaA2]
gi|115525312|ref|YP_782223.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisA53]
gi|122295614|sp|Q07LE1|RS18_RHOP5 RecName: Full=30S ribosomal protein S18
gi|123098720|sp|Q2IX92|RS18_RHOP2 RecName: Full=30S ribosomal protein S18
gi|86572611|gb|ABD07168.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris HaA2]
gi|115519259|gb|ABJ07243.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisA53]
Length = 79
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|315925593|ref|ZP_07921803.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621134|gb|EFV01105.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 74
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK C +DYKDI L +++S+RGKI+P R + K QR++ +A+
Sbjct: 1 MPRPFRRRRKVCEFCEHEDMVVDYKDIATLKKYISERGKILPRRATGACAKHQRKITQAV 60
Query: 70 KRARYLGLIAY 80
RAR + L+ Y
Sbjct: 61 NRARNMALLPY 71
>gi|210624078|ref|ZP_03294178.1| hypothetical protein CLOHIR_02130 [Clostridium hiranonis DSM
13275]
gi|210153211|gb|EEA84217.1| hypothetical protein CLOHIR_02130 [Clostridium hiranonis DSM
13275]
Length = 74
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +IDYKD + L R++++RGKI+P RIS K QREL KAIKRAR + L+
Sbjct: 11 VCQFCADKNAKIDYKDTQRLQRYVTERGKILPRRISGTCAKHQRELTKAIKRARNIALLP 70
Query: 80 YV 81
Y
Sbjct: 71 YT 72
>gi|187478663|ref|YP_786687.1| 30S ribosomal protein S18 [Bordetella avium 197N]
gi|123725072|sp|Q2KZ21|RS18_BORA1 RecName: Full=30S ribosomal protein S18
gi|115423249|emb|CAJ49782.1| 30S ribosomal protein S18 [Bordetella avium 197N]
Length = 90
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 15 QQNPLFKRRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTRAIYQRQLDSAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|114332337|ref|YP_748559.1| 30S ribosomal protein S18 [Nitrosomonas eutropha C91]
gi|114309351|gb|ABI60594.1| SSU ribosomal protein S18P [Nitrosomonas eutropha C91]
Length = 92
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R + R+K C + +G +IDYKD+ LL F+S+ G+I+P+RI+ QR+L A
Sbjct: 17 MANRPLFKRKKFCRFTAEGIKKIDYKDVDLLKDFISENGRIIPARITGTRSYYQRQLNLA 76
Query: 69 IKRARYLGLIAYVN 82
I+RAR+L L+ Y +
Sbjct: 77 IERARFLALLPYTD 90
>gi|120435464|ref|YP_861150.1| 30S ribosomal protein S18 [Gramella forsetii KT0803]
gi|205558459|sp|A0M0D8|RS18_GRAFK RecName: Full=30S ribosomal protein S18
gi|117577614|emb|CAL66083.1| 30S ribosomal protein S18 [Gramella forsetii KT0803]
Length = 99
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + +K C G IDYKD L F++++GK++P R++ S K QR++A A+
Sbjct: 23 LNIETTKAKKYCRFKRSGIKYIDYKDPDFLMGFVNEQGKLLPRRLTGTSLKFQRKVATAV 82
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 83 KRARHLALMPYVG 95
>gi|88803224|ref|ZP_01118750.1| ribosomal protein S18 [Polaribacter irgensii 23-P]
gi|88780790|gb|EAR11969.1| ribosomal protein S18 [Polaribacter irgensii 23-P]
Length = 98
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ K C KG IDYKD L ++++GKI+P R++ S K QR++A+AIKRA
Sbjct: 25 DTKKEAKYCRFKKKGIKYIDYKDADFLMYLVNEQGKILPRRLTGTSLKYQRKVAQAIKRA 84
Query: 73 RYLGLIAYVN 82
R+L L+ YV
Sbjct: 85 RHLALMPYVG 94
>gi|85707088|ref|ZP_01038176.1| 30S ribosomal protein S18 [Roseovarius sp. 217]
gi|149203937|ref|ZP_01880905.1| 30S ribosomal protein S18 [Roseovarius sp. TM1035]
gi|85668374|gb|EAQ23247.1| 30S ribosomal protein S18 [Roseovarius sp. 217]
gi|149142379|gb|EDM30424.1| 30S ribosomal protein S18 [Roseovarius sp. TM1035]
Length = 75
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 57/72 (79%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK CP SG AP+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+A
Sbjct: 1 MATKPFFRRRKVCPFSGDSAPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|92117879|ref|YP_577608.1| 30S ribosomal protein S18 [Nitrobacter hamburgensis X14]
gi|123083638|sp|Q1QKU9|RS18_NITHX RecName: Full=30S ribosomal protein S18
gi|91800773|gb|ABE63148.1| SSU ribosomal protein S18P [Nitrobacter hamburgensis X14]
Length = 79
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYISERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|225016117|ref|ZP_03705350.1| hypothetical protein CLOSTMETH_00061 [Clostridium methylpentosum
DSM 5476]
gi|224951114|gb|EEG32323.1| hypothetical protein CLOSTMETH_00061 [Clostridium methylpentosum
DSM 5476]
Length = 77
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C IDYKDI L R++S+R KIVP R++ + QR+L A+KR
Sbjct: 6 RGRRGRKKVCAFCVDKVENIDYKDIAKLRRYMSERAKIVPRRVTGTCARHQRQLTVAVKR 65
Query: 72 ARYLGLIAYVN 82
AR+L ++ Y++
Sbjct: 66 ARHLAMLPYIS 76
>gi|86133511|ref|ZP_01052093.1| 30S ribosomal protein S18 [Polaribacter sp. MED152]
gi|85820374|gb|EAQ41521.1| 30S ribosomal protein S18 [Polaribacter sp. MED152]
Length = 98
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C KG IDYKD L ++++GKI+P R++ S K QR++A+AIKRAR+L L+
Sbjct: 31 KYCRFKKKGIKYIDYKDADFLMYLVNEQGKILPRRLTGTSLKYQRKVAQAIKRARHLALM 90
Query: 79 AYVN 82
YV
Sbjct: 91 PYVG 94
>gi|238757533|ref|ZP_04618718.1| 30S ribosomal protein S18 [Yersinia aldovae ATCC 35236]
gi|238764708|ref|ZP_04625652.1| 30S ribosomal protein S18 [Yersinia kristensenii ATCC 33638]
gi|300715053|ref|YP_003739856.1| 30S ribosomal protein S18 [Erwinia billingiae Eb661]
gi|238697104|gb|EEP89877.1| 30S ribosomal protein S18 [Yersinia kristensenii ATCC 33638]
gi|238704295|gb|EEP96827.1| 30S ribosomal protein S18 [Yersinia aldovae ATCC 35236]
gi|299060889|emb|CAX57996.1| 30S ribosomal protein S18 [Erwinia billingiae Eb661]
Length = 75
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRA
Sbjct: 3 RYFRRRKFCRFTAEGVVEIDYKDIATLKNYVTESGKIVPSRITGTRAKYQRQLARCIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|51858142|dbj|BAD42300.1| 30S ribosomal protein S18 [Symbiobacterium thermophilum IAM
14863]
Length = 64
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD L R++++RGKI+P RIS + QR+L AIKRAR + L+ +
Sbjct: 2 CSFCVDKIEHVDYKDAARLKRYITERGKILPRRISGNCARHQRQLTVAIKRARIMALLPF 61
Query: 81 V 81
Sbjct: 62 T 62
>gi|104773266|ref|YP_618246.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123252027|sp|Q1GC35|RS18_LACDA RecName: Full=30S ribosomal protein S18
gi|103422347|emb|CAI96855.1| 30S ribosomal protein S18 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 78
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++ +DYKD+ LL F+S+RGKI+P ++ S K QR++A AIKRAR +GL+ +V
Sbjct: 17 IAANHIDYVDYKDVDLLKHFISERGKILPRSVTGTSAKNQRKVANAIKRARIMGLLPFV 75
>gi|332685544|ref|YP_004455318.1| 30S ribosomal protein S18p [Melissococcus plutonius ATCC 35311]
gi|332369553|dbj|BAK20509.1| SSU ribosomal protein S18p [Melissococcus plutonius ATCC 35311]
Length = 79
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKDI LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDIELLKRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLLP 73
Query: 80 YVN 82
+V+
Sbjct: 74 FVS 76
>gi|300172598|ref|YP_003771763.1| 30S ribosomal protein S18 [Leuconostoc gasicomitatum LMG 18811]
gi|299886976|emb|CBL90944.1| 30S ribosomal protein S18 [Leuconostoc gasicomitatum LMG 18811]
Length = 94
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYK+ LL RF+S+RGKI+P R++ S K QR++ AIKRAR + L+
Sbjct: 29 KVDFIAANHIEHIDYKNTELLERFISERGKILPRRVTGTSAKNQRKVTIAIKRARIMALL 88
Query: 79 AYVN 82
+V
Sbjct: 89 PFVT 92
>gi|116750608|ref|YP_847295.1| 30S ribosomal protein S18 [Syntrophobacter fumaroxidans MPOB]
gi|205618953|sp|A0LN58|RS18_SYNFM RecName: Full=30S ribosomal protein S18
gi|116699672|gb|ABK18860.1| SSU ribosomal protein S18P [Syntrophobacter fumaroxidans MPOB]
Length = 81
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +IDYKD + L F+++RGKIVP RIS K QREL A+KRAR + L+
Sbjct: 14 KVCRFCVDSELKIDYKDSKTLRYFVTERGKIVPRRISGNCAKHQRELTLAVKRARQIALL 73
Query: 79 AYVNL 83
+ +
Sbjct: 74 PHTTI 78
>gi|160931686|ref|ZP_02079080.1| hypothetical protein CLOLEP_00517 [Clostridium leptum DSM 753]
gi|156869331|gb|EDO62703.1| hypothetical protein CLOLEP_00517 [Clostridium leptum DSM 753]
Length = 86
Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD+ L R++S+R KI+P R++ + QREL AIKRAR+L L+
Sbjct: 23 VCGFCVDKVESIDYKDVARLRRYISERAKILPRRVTGTCARHQRELTVAIKRARHLALLP 82
Query: 80 YVN 82
+ +
Sbjct: 83 FSS 85
>gi|16767639|ref|NP_463254.1| 30S ribosomal protein S18 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|20978699|sp|Q8ZK81|RS18_SALTY RecName: Full=30S ribosomal protein S18
gi|16422955|gb|AAL23213.1| 30S ribosomal subunit protein S18 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
Length = 75
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+L +AIKRA
Sbjct: 3 RYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLRRAIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|332295125|ref|YP_004437048.1| 30S ribosomal protein S18 [Thermodesulfobium narugense DSM 14796]
gi|332178228|gb|AEE13917.1| 30S ribosomal protein S18 [Thermodesulfobium narugense DSM 14796]
Length = 77
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK+C + IDYKD+ L ++LS RGKI+P R + + K QR+L AIKRAR +
Sbjct: 11 RRKACSFCAEKVKYIDYKDVNRLKKYLSDRGKILPKRATGLCAKHQRQLTTAIKRARMIA 70
Query: 77 LIAYV 81
L+ +
Sbjct: 71 LLPFT 75
>gi|325105010|ref|YP_004274664.1| SSU ribosomal protein S18P [Pedobacter saltans DSM 12145]
gi|324973858|gb|ADY52842.1| SSU ribosomal protein S18P [Pedobacter saltans DSM 12145]
Length = 87
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR +G
Sbjct: 18 RKKYCRFKKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKYQRKVAQAVKRARIIG 77
Query: 77 LIAYVN 82
++ +V
Sbjct: 78 ILPFVT 83
>gi|332800523|ref|YP_004462022.1| 30S ribosomal protein S18 [Tepidanaerobacter sp. Re1]
gi|332698258|gb|AEE92715.1| 30S ribosomal protein S18 [Tepidanaerobacter sp. Re1]
Length = 74
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ ++K C IDYK+ L +++++RGKI+P RI+ K QR+L AI
Sbjct: 1 MKPRRIKKKKVCSFCVDKVDHIDYKEYARLRKYITERGKILPRRITGNCAKHQRQLTIAI 60
Query: 70 KRARYLGLIAYV 81
KRAR L L+ +
Sbjct: 61 KRARNLALLPFT 72
>gi|238020010|ref|ZP_04600436.1| hypothetical protein VEIDISOL_01886 [Veillonella dispar ATCC
17748]
gi|269797402|ref|YP_003311302.1| ribosomal protein S18 [Veillonella parvula DSM 2008]
gi|282849200|ref|ZP_06258585.1| ribosomal protein S18 [Veillonella parvula ATCC 17745]
gi|294793012|ref|ZP_06758158.1| ribosomal protein S18 [Veillonella sp. 6_1_27]
gi|294794948|ref|ZP_06760083.1| ribosomal protein S18 [Veillonella sp. 3_1_44]
gi|303228727|ref|ZP_07315547.1| ribosomal protein S18 [Veillonella atypica ACS-134-V-Col7a]
gi|303231551|ref|ZP_07318280.1| ribosomal protein S18 [Veillonella atypica ACS-049-V-Sch6]
gi|313893864|ref|ZP_07827430.1| ribosomal protein S18 [Veillonella sp. oral taxon 158 str. F0412]
gi|237863534|gb|EEP64824.1| hypothetical protein VEIDISOL_01886 [Veillonella dispar ATCC
17748]
gi|269094031|gb|ACZ24022.1| ribosomal protein S18 [Veillonella parvula DSM 2008]
gi|282580904|gb|EFB86302.1| ribosomal protein S18 [Veillonella parvula ATCC 17745]
gi|294454310|gb|EFG22684.1| ribosomal protein S18 [Veillonella sp. 3_1_44]
gi|294455957|gb|EFG24321.1| ribosomal protein S18 [Veillonella sp. 6_1_27]
gi|302513797|gb|EFL55810.1| ribosomal protein S18 [Veillonella atypica ACS-049-V-Sch6]
gi|302516601|gb|EFL58523.1| ribosomal protein S18 [Veillonella atypica ACS-134-V-Col7a]
gi|313441428|gb|EFR59854.1| ribosomal protein S18 [Veillonella sp. oral taxon 158 str. F0412]
Length = 76
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +IDYKD+ L RF ++RGKI+P RIS K QR+L +IKRAR + L+
Sbjct: 12 KVCVFCADHIDQIDYKDVAKLRRFTTERGKILPRRISGTCAKHQRKLTTSIKRARAIALL 71
Query: 79 AYV 81
+
Sbjct: 72 PFT 74
>gi|108761622|ref|YP_633233.1| 30S ribosomal protein S18 [Myxococcus xanthus DK 1622]
gi|123074131|sp|Q1D290|RS18_MYXXD RecName: Full=30S ribosomal protein S18
gi|108465502|gb|ABF90687.1| ribosomal protein S18 [Myxococcus xanthus DK 1622]
Length = 131
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +D+KD L F+++RGKI+P RIS K QRE+A AIKRAR + L+
Sbjct: 66 VCRFCAEKNASVDFKDQATLKYFVTERGKIIPRRISGNCAKHQREVAVAIKRARGIALLP 125
Query: 80 Y 80
Y
Sbjct: 126 Y 126
>gi|325279432|ref|YP_004251974.1| 30S ribosomal protein S18 [Odoribacter splanchnicus DSM 20712]
gi|324311241|gb|ADY31794.1| 30S ribosomal protein S18 [Odoribacter splanchnicus DSM 20712]
Length = 89
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C IDYKD L +FL+++GKI+P RI+ S K QR++A A+KRAR+L
Sbjct: 19 KKKKYCRFRKARIKFIDYKDPEFLKKFLNEQGKILPRRITGTSVKFQRKVATAVKRARHL 78
Query: 76 GLIAYVN 82
L+ YV
Sbjct: 79 ALLPYVT 85
>gi|75675884|ref|YP_318305.1| 30S ribosomal protein S18 [Nitrobacter winogradskyi Nb-255]
gi|123773250|sp|Q3SRY8|RS18_NITWN RecName: Full=30S ribosomal protein S18
gi|74420754|gb|ABA04953.1| SSU ribosomal protein S18P [Nitrobacter winogradskyi Nb-255]
Length = 79
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGANAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|229816198|ref|ZP_04446508.1| hypothetical protein COLINT_03245 [Collinsella intestinalis DSM
13280]
gi|229808206|gb|EEP43998.1| hypothetical protein COLINT_03245 [Collinsella intestinalis DSM
13280]
Length = 88
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RRK C + IDYKD +LL ++++ RGKI P R++ + Q ++A AIKRAR
Sbjct: 8 RQPRRKYCQFCKENTEFIDYKDTQLLRKYMTDRGKIKPRRVTGACTQHQHDIANAIKRAR 67
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 68 EMALLPY 74
>gi|85708888|ref|ZP_01039954.1| 30S ribosomal protein S18 [Erythrobacter sp. NAP1]
gi|85690422|gb|EAQ30425.1| 30S ribosomal protein S18 [Erythrobacter sp. NAP1]
Length = 74
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/72 (69%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP SGK AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKSCPFSGKDAPKIDYKDVRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|114704793|ref|ZP_01437701.1| 30S ribosomal protein S18 [Fulvimarina pelagi HTCC2506]
gi|114539578|gb|EAU42698.1| 30S ribosomal protein S18 [Fulvimarina pelagi HTCC2506]
Length = 82
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M ++A P RR RRKS P SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS K
Sbjct: 1 MVDIAQLP-TRRPFHRRRKSDPFSGNDAPKIDYKDVRLLQRYISERGKIVPSRITAVSQK 59
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR LAKAIKRAR LGL+ YV
Sbjct: 60 NQRALAKAIKRARILGLLPYV 80
>gi|33593750|ref|NP_881394.1| 30S ribosomal protein S18 [Bordetella pertussis Tohama I]
gi|33597056|ref|NP_884699.1| 30S ribosomal protein S18 [Bordetella parapertussis 12822]
gi|33600901|ref|NP_888461.1| 30S ribosomal protein S18 [Bordetella bronchiseptica RB50]
gi|59798865|sp|Q7VV91|RS18_BORPE RecName: Full=30S ribosomal protein S18
gi|59798870|sp|Q7W7P6|RS18_BORPA RecName: Full=30S ribosomal protein S18
gi|59798872|sp|Q7WL33|RS18_BORBR RecName: Full=30S ribosomal protein S18
gi|33563823|emb|CAE43067.1| 30s ribosomal protein s18 [Bordetella pertussis Tohama I]
gi|33566507|emb|CAE37763.1| 30s ribosomal protein s18 [Bordetella parapertussis]
gi|33568501|emb|CAE32413.1| 30s ribosomal protein s18 [Bordetella bronchiseptica RB50]
gi|332383152|gb|AEE67999.1| 30S ribosomal protein S18 [Bordetella pertussis CS]
Length = 90
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C + G IDYKD+ L F+ + GKI+P+R++ QR+L AI
Sbjct: 15 QQNPLFKRRKFCRFTAAGVEEIDYKDLDTLRDFVQENGKIIPARLTGTRAIYQRQLDTAI 74
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y +
Sbjct: 75 KRARFLALLPYTD 87
>gi|153956490|ref|YP_001397255.1| 30S ribosomal protein S18 [Clostridium kluyveri DSM 555]
gi|219856793|ref|YP_002473915.1| hypothetical protein CKR_3450 [Clostridium kluyveri NBRC 12016]
gi|189029673|sp|A5N438|RS18_CLOK5 RecName: Full=30S ribosomal protein S18
gi|254765422|sp|B9DXQ8|RS18_CLOK1 RecName: Full=30S ribosomal protein S18
gi|146349348|gb|EDK35884.1| RpsR [Clostridium kluyveri DSM 555]
gi|219570517|dbj|BAH08501.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 84
Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+RK C + IDYKDI L +++++RGKI+P RIS K QREL +AIKRAR +
Sbjct: 18 KRKVCAFCMDKSEFIDYKDINKLRKYVTERGKILPRRISGNCAKHQRELTRAIKRARNIA 77
Query: 77 LIAYVN 82
L+ +
Sbjct: 78 LLPFTT 83
>gi|85716345|ref|ZP_01047318.1| 30S ribosomal protein S18 [Nitrobacter sp. Nb-311A]
gi|85696861|gb|EAQ34746.1| 30S ribosomal protein S18 [Nitrobacter sp. Nb-311A]
Length = 79
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+A+K
Sbjct: 7 RRPFFRRRKTCPFTGSNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAVK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|116493585|ref|YP_805319.1| 30S ribosomal protein S18 [Lactobacillus casei ATCC 334]
gi|191636835|ref|YP_001986001.1| 30S ribosomal protein S18 [Lactobacillus casei BL23]
gi|199598219|ref|ZP_03211640.1| Ribosomal protein S18 [Lactobacillus rhamnosus HN001]
gi|227533495|ref|ZP_03963544.1| ribosomal protein S18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229551090|ref|ZP_04439815.1| ribosomal protein S18 [Lactobacillus rhamnosus LMS2-1]
gi|239630816|ref|ZP_04673847.1| SSU ribosomal protein S18P [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|258507008|ref|YP_003169759.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus GG]
gi|258538205|ref|YP_003172704.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus Lc 705]
gi|301065139|ref|YP_003787162.1| 30S ribosomal protein L18 [Lactobacillus casei str. Zhang]
gi|122264952|sp|Q03D45|RS18_LACC3 RecName: Full=30S ribosomal protein S18
gi|229560041|sp|B3W6R6|RS18_LACCB RecName: Full=30S ribosomal protein S18
gi|116103735|gb|ABJ68877.1| SSU ribosomal protein S18P [Lactobacillus casei ATCC 334]
gi|190711137|emb|CAQ65143.1| 30S ribosomal protein S18 [Lactobacillus casei BL23]
gi|199590822|gb|EDY98907.1| Ribosomal protein S18 [Lactobacillus rhamnosus HN001]
gi|227188824|gb|EEI68891.1| ribosomal protein S18 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|229315551|gb|EEN81524.1| ribosomal protein S18 [Lactobacillus rhamnosus LMS2-1]
gi|239527099|gb|EEQ66100.1| SSU ribosomal protein S18P [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|257146935|emb|CAR85908.1| SSU/30S ribosomal protein S18P [Lactobacillus rhamnosus GG]
gi|257149881|emb|CAR88853.1| SSU/30S ribosomal protein S18P [Lactobacillus rhamnosus Lc 705]
gi|259648377|dbj|BAI40539.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus GG]
gi|300437546|gb|ADK17312.1| Ribosomal protein S18 [Lactobacillus casei str. Zhang]
gi|327380874|gb|AEA52350.1| 30S ribosomal protein S18 [Lactobacillus casei LC2W]
gi|327384038|gb|AEA55512.1| 30S ribosomal protein S18 [Lactobacillus casei BD-II]
gi|328463730|gb|EGF35304.1| 30S ribosomal protein S18 [Lactobacillus rhamnosus MTCC 5462]
Length = 78
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL+RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDTNLLDRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLL 72
Query: 79 AYVN 82
+V+
Sbjct: 73 PFVS 76
>gi|148553013|ref|YP_001260595.1| 30S ribosomal protein S18 [Sphingomonas wittichii RW1]
gi|205617566|sp|A5V2E1|RS18_SPHWW RecName: Full=30S ribosomal protein S18
gi|148498203|gb|ABQ66457.1| SSU ribosomal protein S18P [Sphingomonas wittichii RW1]
Length = 74
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/72 (68%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP S K APRIDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARAFFRRRKSCPFSAKDAPRIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELAQAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|148543252|ref|YP_001270622.1| 30S ribosomal protein S18 [Lactobacillus reuteri DSM 20016]
gi|184152664|ref|YP_001841005.1| 30S ribosomal protein S18 [Lactobacillus reuteri JCM 1112]
gi|194467411|ref|ZP_03073398.1| ribosomal protein S18 [Lactobacillus reuteri 100-23]
gi|227364315|ref|ZP_03848408.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM2-3]
gi|227543727|ref|ZP_03973776.1| 30S ribosomal protein S18 [Lactobacillus reuteri CF48-3A]
gi|259502122|ref|ZP_05745024.1| 30S ribosomal protein S18 [Lactobacillus antri DSM 16041]
gi|300908792|ref|ZP_07126255.1| 30S ribosomal protein S18 [Lactobacillus reuteri SD2112]
gi|312869248|ref|ZP_07729420.1| ribosomal protein S18 [Lactobacillus oris PB013-T2-3]
gi|325683514|ref|ZP_08163030.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM4-1A]
gi|167011191|sp|A5VHG1|RS18_LACRD RecName: Full=30S ribosomal protein S18
gi|229560043|sp|B2G4Z3|RS18_LACRJ RecName: Full=30S ribosomal protein S18
gi|148530286|gb|ABQ82285.1| SSU ribosomal protein S18P [Lactobacillus reuteri DSM 20016]
gi|183224008|dbj|BAG24525.1| 30S ribosomal protein S18 [Lactobacillus reuteri JCM 1112]
gi|194454447|gb|EDX43344.1| ribosomal protein S18 [Lactobacillus reuteri 100-23]
gi|227070628|gb|EEI08958.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM2-3]
gi|227186295|gb|EEI66366.1| 30S ribosomal protein S18 [Lactobacillus reuteri CF48-3A]
gi|259169935|gb|EEW54430.1| 30S ribosomal protein S18 [Lactobacillus antri DSM 16041]
gi|300894199|gb|EFK87557.1| 30S ribosomal protein S18 [Lactobacillus reuteri SD2112]
gi|311095269|gb|EFQ53541.1| ribosomal protein S18 [Lactobacillus oris PB013-T2-3]
gi|324977864|gb|EGC14815.1| 30S ribosomal protein S18 [Lactobacillus reuteri MM4-1A]
Length = 78
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|239995320|ref|ZP_04715844.1| 30S ribosomal protein S18 [Alteromonas macleodii ATCC 27126]
gi|332143173|ref|YP_004428911.1| 30S ribosomal protein S18 [Alteromonas macleodii str. 'Deep
ecotype']
gi|229470505|sp|B4S011|RS18_ALTMD RecName: Full=30S ribosomal protein S18
gi|327553195|gb|AEA99913.1| 30S ribosomal protein S18 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 75
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKDI L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 TAEGVTEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLSSAIKRARFLALLPYTD 72
>gi|163815607|ref|ZP_02206980.1| hypothetical protein COPEUT_01782 [Coprococcus eutactus ATCC
27759]
gi|158449244|gb|EDP26239.1| hypothetical protein COPEUT_01782 [Coprococcus eutactus ATCC
27759]
Length = 87
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A P+ RRN+ R+K C IDYKD L +++S+RGKI+P RI+ K
Sbjct: 6 TDRADAPMKRRNIRRRKKVCEYCANKEAVIDYKDSNALRKYISERGKILPRRITGTCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR + A+KRAR + ++ YV
Sbjct: 66 QRAITIAVKRARQIAVLPYV 85
>gi|163788027|ref|ZP_02182473.1| 30S ribosomal protein S18 [Flavobacteriales bacterium ALC-1]
gi|159876347|gb|EDP70405.1| 30S ribosomal protein S18 [Flavobacteriales bacterium ALC-1]
Length = 98
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L S +K C G +DYKD L F++++GK++P R++ S K QR+++ A+
Sbjct: 22 LNIETSKTKKYCRFKKSGIKYVDYKDADWLLGFVNEQGKLLPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYV 81
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYV 93
>gi|323705824|ref|ZP_08117396.1| ribosomal protein S18 [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534820|gb|EGB24599.1| ribosomal protein S18 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 88
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYK++ L +++++RGKI+P RI+ QR+L AIKRAR + L+
Sbjct: 25 VCAFCADRIDYIDYKEVGKLRKYITERGKILPRRITGNCAIHQRQLTVAIKRARQIALLP 84
Query: 80 YV 81
Y
Sbjct: 85 YT 86
>gi|295425406|ref|ZP_06818104.1| 30S ribosomal protein S18 [Lactobacillus amylolyticus DSM 11664]
gi|295064908|gb|EFG55818.1| 30S ribosomal protein S18 [Lactobacillus amylolyticus DSM 11664]
Length = 77
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ +DYKD+ LL RF+S+RGKI+P R++ S K QR++AKAIKRAR +GL+
Sbjct: 12 KVDYIAANHINYVDYKDVDLLKRFISERGKILPRRVTGTSAKNQRKVAKAIKRARIMGLL 71
Query: 79 AYV 81
+V
Sbjct: 72 PFV 74
>gi|187923778|ref|YP_001895420.1| 30S ribosomal protein S18 [Burkholderia phytofirmans PsJN]
gi|229559973|sp|B2T3N5|RS18_BURPP RecName: Full=30S ribosomal protein S18
gi|187714972|gb|ACD16196.1| ribosomal protein S18 [Burkholderia phytofirmans PsJN]
Length = 91
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + R+K C + IDYKD+ L F+ + GKI P+R++ QR
Sbjct: 9 FDKRRQQQNPLFKRKKFCRFTAANVDHIDYKDLETLKDFIGENGKITPARLTGTKSHYQR 68
Query: 64 ELAKAIKRARYLGLIAYVN 82
+L AIKRAR+L L+ Y +
Sbjct: 69 QLDTAIKRARFLALVPYTD 87
>gi|227529854|ref|ZP_03959903.1| 30S ribosomal protein S18 [Lactobacillus vaginalis ATCC 49540]
gi|227350223|gb|EEJ40514.1| 30S ribosomal protein S18 [Lactobacillus vaginalis ATCC 49540]
Length = 78
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIDYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|295093121|emb|CBK82212.1| SSU ribosomal protein S18P [Coprococcus sp. ART55/1]
Length = 87
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A P+ RRN+ R+K C IDYKD L +++S+RGKI+P RI+ K
Sbjct: 6 TDRADAPMKRRNIRRRKKVCEYCANKEAVIDYKDSNALRKYISERGKILPRRITGTCAKH 65
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR + A+KRAR + ++ YV
Sbjct: 66 QRAITIAVKRARQIAILPYV 85
>gi|257093840|ref|YP_003167481.1| 30S ribosomal protein S18 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046364|gb|ACV35552.1| ribosomal protein S18 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 91
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ RRK C + + IDYKD+ L ++++ KI+P+R++ QR L+ AIKRAR
Sbjct: 20 LFKRRKFCRFTAEKMEEIDYKDVDLFKEYVAENAKIMPARLTGTKAGYQRMLSVAIKRAR 79
Query: 74 YLGLIAYVN 82
+L L+ Y +
Sbjct: 80 FLALLPYTD 88
>gi|83749657|ref|ZP_00946638.1| SSU ribosomal protein S18P [Ralstonia solanacearum UW551]
gi|207723263|ref|YP_002253662.1| 30s ribosomal protein s18 [Ralstonia solanacearum MolK2]
gi|207743342|ref|YP_002259734.1| 30s ribosomal protein s18 [Ralstonia solanacearum IPO1609]
gi|83723659|gb|EAP70856.1| SSU ribosomal protein S18P [Ralstonia solanacearum UW551]
gi|206588461|emb|CAQ35424.1| 30s ribosomal protein s18 [Ralstonia solanacearum MolK2]
gi|206594739|emb|CAQ61666.1| 30s ribosomal protein s18 [Ralstonia solanacearum IPO1609]
Length = 95
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L A
Sbjct: 18 QQQNPLFKRKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRSHYQRQLDTA 77
Query: 69 IKRARYLGLIAYVN 82
IKRAR+L L+ Y +
Sbjct: 78 IKRARFLALMPYTD 91
>gi|332995432|gb|AEF05487.1| 30S ribosomal protein S18 [Alteromonas sp. SN2]
Length = 75
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ G IDYKDI L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 TADGVTEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLSSAIKRARFLALLPYTD 72
>gi|163797515|ref|ZP_02191466.1| Ribosomal protein S18 [alpha proteobacterium BAL199]
gi|159177264|gb|EDP61823.1| Ribosomal protein S18 [alpha proteobacterium BAL199]
Length = 84
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/72 (68%), Positives = 61/72 (84%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RR RRKSCP SG GAP IDYKD +LL+RF+S+RGKIVPSRI++VS KKQRE+A+AI
Sbjct: 11 VRRPFMRRRKSCPFSGTGAPIIDYKDTKLLSRFISERGKIVPSRITAVSAKKQREMARAI 70
Query: 70 KRARYLGLIAYV 81
KR+R+L L+ YV
Sbjct: 71 KRSRFLALLPYV 82
>gi|154498399|ref|ZP_02036777.1| hypothetical protein BACCAP_02388 [Bacteroides capillosus ATCC
29799]
gi|150272467|gb|EDM99652.1| hypothetical protein BACCAP_02388 [Bacteroides capillosus ATCC
29799]
Length = 79
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYKD L RFLS+R KI+P R + QR+L +AIKRAR + L+
Sbjct: 15 KVCTFCVDKVEHIDYKDAVKLRRFLSERSKILPRRTTGTCAMHQRQLTEAIKRARQIALL 74
Query: 79 AYVN 82
YV
Sbjct: 75 PYVT 78
>gi|91214893|ref|ZP_01251866.1| ribosomal protein S18 [Psychroflexus torquis ATCC 700755]
gi|91187320|gb|EAS73690.1| ribosomal protein S18 [Psychroflexus torquis ATCC 700755]
Length = 98
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ + C G +DYK+ L F++++GKI+P R++ S K QR++++AIKR+
Sbjct: 25 ETKSKTRFCRFKRAGIKYVDYKNADFLMEFVNEQGKILPRRLTGTSLKYQRKVSQAIKRS 84
Query: 73 RYLGLIAYVN 82
R+L L+ YV
Sbjct: 85 RHLALMPYVG 94
>gi|305667287|ref|YP_003863574.1| 30S ribosomal protein S18 [Maribacter sp. HTCC2170]
gi|88709334|gb|EAR01567.1| ribosomal protein S18 [Maribacter sp. HTCC2170]
Length = 98
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + ++K C G IDYKD L + ++++GK++P R++ S K QR++A+A+
Sbjct: 22 LNIETNTKKKYCRFKKSGIKYIDYKDADFLMKLVNEQGKLLPRRLTGTSLKYQRKVAQAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYVG 94
>gi|332298063|ref|YP_004439985.1| 30S ribosomal protein S18 [Treponema brennaborense DSM 12168]
gi|332181166|gb|AEE16854.1| 30S ribosomal protein S18 [Treponema brennaborense DSM 12168]
Length = 103
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + R+K C + A IDYKD L R+ ++RGKI+P RI+ K QR LA
Sbjct: 28 APRSKGKTFFRKKVCRFCAQKAK-IDYKDADALRRYTTERGKILPRRITGTCAKHQRRLA 86
Query: 67 KAIKRARYLGLIAYV 81
IKRAR + L+ +V
Sbjct: 87 LEIKRARAICLLPFV 101
>gi|224368965|ref|YP_002603129.1| 30S ribosomal protein S18 [Desulfobacterium autotrophicum HRM2]
gi|223691682|gb|ACN14965.1| RpsR [Desulfobacterium autotrophicum HRM2]
Length = 83
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK C I YKD + L F+++RGKI+P RI+ K QR L+ AIK
Sbjct: 9 KKRFFQRRKVCRFCADSTLEISYKDAKALRSFITERGKIIPRRITGTCAKHQRVLSSAIK 68
Query: 71 RARYLGLIAYVN 82
+AR + L+ YV
Sbjct: 69 QARTIALLPYVG 80
>gi|255530652|ref|YP_003091024.1| 30S ribosomal protein S18 [Pedobacter heparinus DSM 2366]
gi|255343636|gb|ACU02962.1| ribosomal protein S18 [Pedobacter heparinus DSM 2366]
Length = 87
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KRAR++G
Sbjct: 18 RKKYCRFRKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKFQRKVAQAVKRARHIG 77
Query: 77 LIAYV 81
L+ +V
Sbjct: 78 LLPFV 82
>gi|86142229|ref|ZP_01060739.1| ribosomal protein S18 [Leeuwenhoekiella blandensis MED217]
gi|85830981|gb|EAQ49438.1| ribosomal protein S18 [Leeuwenhoekiella blandensis MED217]
Length = 99
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L S +K C G +DYKD L F++++GK++P R++ S K QR+++ A+
Sbjct: 23 LNIETSKTKKYCRFKRSGIKYVDYKDADWLASFVNEQGKLLPRRLTGTSLKYQRKVSVAV 82
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 83 KRARHLALMPYVT 95
>gi|255527666|ref|ZP_05394525.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|296186805|ref|ZP_06855206.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|255508646|gb|EET85027.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
gi|296048519|gb|EFG87952.1| ribosomal protein S18 [Clostridium carboxidivorans P7]
Length = 85
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ +RK C A IDYKDI L +++++RGKI+P RIS K QR+L AIKR
Sbjct: 14 KMRRAKRKICSFCMDKAESIDYKDINKLRKYVTERGKILPRRISGNCAKHQRQLTDAIKR 73
Query: 72 ARYLGLIAYVN 82
AR + L+ +
Sbjct: 74 ARNIALLPFTT 84
>gi|116332690|ref|YP_794217.1| ribosomal protein S18 [Lactobacillus brevis ATCC 367]
gi|122270614|sp|Q03UD6|RS18_LACBA RecName: Full=30S ribosomal protein S18
gi|116098037|gb|ABJ63186.1| SSU ribosomal protein S18P [Lactobacillus brevis ATCC 367]
Length = 78
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR+L AIKR+R +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRKLTIAIKRSRIMGLM 72
Query: 79 AYVN 82
+V+
Sbjct: 73 PFVS 76
>gi|295698471|ref|YP_003603126.1| ribosomal protein S18 [Candidatus Riesia pediculicola USDA]
gi|291157471|gb|ADD79916.1| ribosomal protein S18 [Candidatus Riesia pediculicola USDA]
Length = 76
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ N R+K C + + A IDYKDI L ++++ GKIVPSRI+ K QR+L++AI
Sbjct: 1 MKHNFFRRKKFCRFTAEKAREIDYKDIEKLRNYITESGKIVPSRITGTKVKYQRKLSRAI 60
Query: 70 KRARYLGLIAYVN 82
K ARYL L+ Y +
Sbjct: 61 KIARYLALLPYTD 73
>gi|114773242|ref|ZP_01450477.1| 30S ribosomal subunit protein S18 [alpha proteobacterium
HTCC2255]
gi|114546361|gb|EAU49270.1| 30S ribosomal subunit protein S18 [alpha proteobacterium
HTCC2255]
Length = 75
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
S +G IDYKD L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 SAEGVVEIDYKDTATLRNYVTESGKIVPSRITGTSAKYQRQLSTAIKRARFLALLPYTD 72
>gi|295100600|emb|CBK98145.1| SSU ribosomal protein S18P [Faecalibacterium prausnitzii L2-6]
Length = 85
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +RR R+K C IDYKD+ L +++S+R KI+P R++ QR L
Sbjct: 11 PARPMRRG---RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAFHQRAL 67
Query: 66 AKAIKRARYLGLIAYVN 82
AIKRAR++ L+ YV+
Sbjct: 68 TVAIKRARHVALMPYVS 84
>gi|85374300|ref|YP_458362.1| 30S ribosomal protein S18 [Erythrobacter litoralis HTCC2594]
gi|123099521|sp|Q2N9S6|RS18_ERYLH RecName: Full=30S ribosomal protein S18
gi|84787383|gb|ABC63565.1| ribosomal protein S18 [Erythrobacter litoralis HTCC2594]
Length = 74
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP+IDYKD RLL F+S+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKNAPKIDYKDTRLLQGFMSERGKIVPSRITAVSAKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|86130271|ref|ZP_01048871.1| 30S ribosomal protein S18 [Dokdonia donghaensis MED134]
gi|332293237|ref|YP_004431846.1| ribosomal protein S18 [Krokinobacter diaphorus 4H-3-7-5]
gi|85818946|gb|EAQ40105.1| 30S ribosomal protein S18 [Dokdonia donghaensis MED134]
gi|332171323|gb|AEE20578.1| ribosomal protein S18 [Krokinobacter diaphorus 4H-3-7-5]
Length = 98
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + +K C G +DYKD L F++++GK++P R++ S K QR+++ A+
Sbjct: 22 LNIETNKAKKYCRFKKSGIKYVDYKDADWLAGFVNEQGKLLPRRLTGTSLKYQRKVSVAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYVT 94
>gi|238783557|ref|ZP_04627579.1| 30S ribosomal protein S18 [Yersinia bercovieri ATCC 43970]
gi|238715612|gb|EEQ07602.1| 30S ribosomal protein S18 [Yersinia bercovieri ATCC 43970]
Length = 75
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K QR+LA+ IKRA
Sbjct: 3 RYFRRRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKFQRQLARCIKRA 62
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 63 RYLSLLPYTD 72
>gi|331700406|ref|YP_004397365.1| 30S ribosomal protein S18 [Lactobacillus buchneri NRRL B-30929]
gi|329127749|gb|AEB72302.1| 30S ribosomal protein S18 [Lactobacillus buchneri NRRL B-30929]
Length = 79
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKDI LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+
Sbjct: 14 KVDFIAANHIEYIDYKDIDLLKRFVSERGKILPRRVTGTSAKNQRALTIAIKRARIMGLM 73
Query: 79 AYV 81
+V
Sbjct: 74 PFV 76
>gi|205562295|sp|A9KKC8|RS18_CLOPH RecName: Full=30S ribosomal protein S18
Length = 76
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 20 SCPLSGKGA-PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
C IDYKD+ L R++S+RGKI+P RI+ K QR L A+KRAR++ L+
Sbjct: 12 VCAFCADKNHKEIDYKDVNKLKRYVSERGKILPRRITGNCAKHQRALTVAVKRARHIALM 71
Query: 79 AYV 81
Y
Sbjct: 72 PYT 74
>gi|29654192|ref|NP_819884.1| 30S ribosomal protein S18 [Coxiella burnetii RSA 493]
gi|153209209|ref|ZP_01947275.1| ribosomal protein S18 [Coxiella burnetii 'MSU Goat Q177']
gi|154705894|ref|YP_001424310.1| 30S ribosomal protein S18 [Coxiella burnetii Dugway 5J108-111]
gi|161829761|ref|YP_001596842.1| 30S ribosomal protein S18 [Coxiella burnetii RSA 331]
gi|165918540|ref|ZP_02218626.1| ribosomal protein S18 [Coxiella burnetii RSA 334]
gi|212212682|ref|YP_002303618.1| 30S ribosomal protein S18 [Coxiella burnetii CbuG_Q212]
gi|212218345|ref|YP_002305132.1| 30S ribosomal protein S18 [Coxiella burnetii CbuK_Q154]
gi|59798886|sp|Q83D75|RS18_COXBU RecName: Full=30S ribosomal protein S18
gi|189029674|sp|A9KFL6|RS18_COXBN RecName: Full=30S ribosomal protein S18
gi|189029675|sp|A9ND52|RS18_COXBR RecName: Full=30S ribosomal protein S18
gi|29541458|gb|AAO90398.1| SSU ribosomal protein S18P [Coxiella burnetii RSA 493]
gi|120575464|gb|EAX32088.1| ribosomal protein S18 [Coxiella burnetii 'MSU Goat Q177']
gi|154355180|gb|ABS76642.1| SSU ribosomal protein S18P [Coxiella burnetii Dugway 5J108-111]
gi|161761628|gb|ABX77270.1| ribosomal protein S18 [Coxiella burnetii RSA 331]
gi|165917786|gb|EDR36390.1| ribosomal protein S18 [Coxiella burnetii RSA 334]
gi|212011092|gb|ACJ18473.1| SSU ribosomal protein S18P [Coxiella burnetii CbuG_Q212]
gi|212012607|gb|ACJ19987.1| SSU ribosomal protein S18P [Coxiella burnetii CbuK_Q154]
Length = 73
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K C K IDYKD+ L ++ + G++VPSRI+ K QR++++AIK ARY
Sbjct: 3 FRRKKFCAFDAKNLQEIDYKDVNTLKDYIMESGRVVPSRITGTCAKHQRQISRAIKLARY 62
Query: 75 LGLIAYVN 82
L L+ Y +
Sbjct: 63 LALLPYCD 70
>gi|269129130|ref|YP_003302500.1| 30S ribosomal protein S18 [Thermomonospora curvata DSM 43183]
gi|268314088|gb|ACZ00463.1| ribosomal protein S18 [Thermomonospora curvata DSM 43183]
Length = 78
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +DYKD LL +F+S RGKI R++ + QR++A AIK AR + L+
Sbjct: 13 VCVFCQEKISYVDYKDTGLLRKFISDRGKIRARRVTGNCTQHQRDVATAIKNAREMALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTS 75
>gi|212697312|ref|ZP_03305440.1| hypothetical protein ANHYDRO_01880 [Anaerococcus hydrogenalis DSM
7454]
gi|325848774|ref|ZP_08170284.1| ribosomal protein S18 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675761|gb|EEB35368.1| hypothetical protein ANHYDRO_01880 [Anaerococcus hydrogenalis DSM
7454]
gi|325480418|gb|EGC83480.1| ribosomal protein S18 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 74
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RRN R+K P + IDYKDI L RF+S RGKI+P R++ ++ K QRE+ +AI
Sbjct: 1 MRRNFRPRKKVDPFVKDPSKVIDYKDIDTLKRFISDRGKILPRRVTGLNAKHQREITRAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQVALLPY 71
>gi|15674171|ref|NP_268346.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis
Il1403]
gi|116513137|ref|YP_812044.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
SK11]
gi|125625229|ref|YP_001033712.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492845|ref|YP_003354825.1| 50S ribosomal protein S18P [Lactococcus lactis subsp. lactis
KF147]
gi|13878750|sp|Q9CDN0|RS18_LACLA RecName: Full=30S ribosomal protein S18
gi|122939895|sp|Q02VU1|RS18_LACLS RecName: Full=30S ribosomal protein S18
gi|166220956|sp|A2RNZ2|RS18_LACLM RecName: Full=30S ribosomal protein S18
gi|12725253|gb|AAK06287.1|AE006448_5 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis
Il1403]
gi|116108791|gb|ABJ73931.1| SSU ribosomal protein S18P [Lactococcus lactis subsp. cremoris
SK11]
gi|124494037|emb|CAL99037.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376497|gb|ADA65983.1| SSU ribosomal protein S18P [Lactococcus lactis subsp. lactis
KF147]
gi|300072039|gb|ADJ61439.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|326407763|gb|ADZ64834.1| 30S ribosomal protein S18 [Lactococcus lactis subsp. lactis CV56]
Length = 81
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K ++ +DYKD LL RF+S+RGKI+P R++ S K QR++ AIK
Sbjct: 6 RGGFKRRKKVDFIAANKIEVVDYKDTELLKRFISERGKILPRRVTGTSAKNQRKVVNAIK 65
Query: 71 RARYLGLIAYV 81
RAR + L+ +V
Sbjct: 66 RARVMALLPFV 76
>gi|256545548|ref|ZP_05472908.1| 30S ribosomal protein S18 [Anaerococcus vaginalis ATCC 51170]
gi|256398759|gb|EEU12376.1| 30S ribosomal protein S18 [Anaerococcus vaginalis ATCC 51170]
Length = 74
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+RRN R+K P + IDYKDI L RF+S RGKI+P R++ ++ K QRE+ +AI
Sbjct: 1 MRRNFRPRKKVDPFVKDPSKVIDYKDIDTLKRFVSDRGKILPRRVTGLNAKHQREITRAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQVALLPY 71
>gi|149279559|ref|ZP_01885688.1| 30S ribosomal protein S18 [Pedobacter sp. BAL39]
gi|149229595|gb|EDM34985.1| 30S ribosomal protein S18 [Pedobacter sp. BAL39]
Length = 87
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GKI+P R++ S K QR++A+A+KR+R++G
Sbjct: 18 RKKYCRFKKNGIKYIDYKDANFLLKFINDQGKILPRRLTGTSLKFQRKVAQAVKRSRHIG 77
Query: 77 LIAYV 81
L+ +V
Sbjct: 78 LLPFV 82
>gi|56552122|ref|YP_162961.1| 30S ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762068|ref|ZP_04760152.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260752353|ref|YP_003225246.1| 30S ribosomal protein S18 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|81677185|sp|Q5NN60|RS18_ZYMMO RecName: Full=30S ribosomal protein S18
gi|56543696|gb|AAV89850.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373534|gb|EER63121.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258551716|gb|ACV74662.1| ribosomal protein S18 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 74
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 46/72 (63%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRKSCP + K AP+IDYKD+RLL F+S+RGKIVPSRI++VS KKQRELA+AI
Sbjct: 1 MARPFFRRRKSCPFAAKDAPKIDYKDVRLLQGFVSERGKIVPSRITAVSAKKQRELARAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ ++
Sbjct: 61 KRARHIGLLPFI 72
>gi|296271508|ref|YP_003654140.1| 30S ribosomal protein S18 [Thermobispora bispora DSM 43833]
gi|296094295|gb|ADG90247.1| ribosomal protein S18 [Thermobispora bispora DSM 43833]
Length = 78
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C + +DYKD LL +F+S RGKI R++ + QR++A AIK AR
Sbjct: 7 RKPKKKVCLFCHEKISYVDYKDTALLRKFISDRGKIRARRVTGNCTQHQRDVATAIKNAR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYTS 75
>gi|126701289|ref|YP_001090186.1| 30S ribosomal protein S18 [Clostridium difficile 630]
gi|254977322|ref|ZP_05273794.1| 30S ribosomal protein S18 [Clostridium difficile QCD-66c26]
gi|255094653|ref|ZP_05324131.1| 30S ribosomal protein S18 [Clostridium difficile CIP 107932]
gi|255102879|ref|ZP_05331856.1| 30S ribosomal protein S18 [Clostridium difficile QCD-63q42]
gi|255308699|ref|ZP_05352870.1| 30S ribosomal protein S18 [Clostridium difficile ATCC 43255]
gi|255316406|ref|ZP_05357989.1| 30S ribosomal protein S18 [Clostridium difficile QCD-76w55]
gi|255519065|ref|ZP_05386741.1| 30S ribosomal protein S18 [Clostridium difficile QCD-97b34]
gi|255652249|ref|ZP_05399151.1| 30S ribosomal protein S18 [Clostridium difficile QCD-37x79]
gi|255657618|ref|ZP_05403027.1| 30S ribosomal protein S18 [Clostridium difficile QCD-23m63]
gi|260685203|ref|YP_003216488.1| 30S ribosomal protein S18 [Clostridium difficile CD196]
gi|260688862|ref|YP_003219996.1| 30S ribosomal protein S18 [Clostridium difficile R20291]
gi|296452701|ref|ZP_06894392.1| 30S ribosomal protein S18 [Clostridium difficile NAP08]
gi|296880045|ref|ZP_06904015.1| 30S ribosomal protein S18 [Clostridium difficile NAP07]
gi|306521964|ref|ZP_07408311.1| 30S ribosomal protein S18 [Clostridium difficile QCD-32g58]
gi|122973570|sp|Q181R4|RS18_CLOD6 RecName: Full=30S ribosomal protein S18
gi|115252726|emb|CAJ70570.1| 30S ribosomal protein S18 [Clostridium difficile]
gi|260211366|emb|CBA67007.1| 30S ribosomal protein S18 [Clostridium difficile CD196]
gi|260214879|emb|CBE07674.1| 30S ribosomal protein S18 [Clostridium difficile R20291]
gi|296258483|gb|EFH05387.1| 30S ribosomal protein S18 [Clostridium difficile NAP08]
gi|296429022|gb|EFH14899.1| 30S ribosomal protein S18 [Clostridium difficile NAP07]
Length = 75
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
++ + +++ C +IDYK + L +++++RGKI+P RIS K QREL A
Sbjct: 1 MMNKKRRKKKRVCQFCADKNAKIDYKSTQRLQKYITERGKILPRRISGTCAKHQRELTVA 60
Query: 69 IKRARYLGLIAYV 81
IKRAR + L+ Y
Sbjct: 61 IKRARNIALLPYT 73
>gi|17546028|ref|NP_519430.1| 30S ribosomal protein S18 [Ralstonia solanacearum GMI1000]
gi|300691703|ref|YP_003752698.1| 30S ribosomal protein S18 [Ralstonia solanacearum PSI07]
gi|300704316|ref|YP_003745919.1| 30S ribosomal protein S18 [Ralstonia solanacearum CFBP2957]
gi|20978684|sp|Q8XZT6|RS18_RALSO RecName: Full=30S ribosomal protein S18
gi|17428323|emb|CAD15011.1| probable 30s ribosomal protein s18 [Ralstonia solanacearum
GMI1000]
gi|299067361|emb|CBJ38560.1| 30S ribosomal protein S18 [Ralstonia solanacearum CMR15]
gi|299071980|emb|CBJ43310.1| 30S ribosomal protein S18 [Ralstonia solanacearum CFBP2957]
gi|299078763|emb|CBJ51423.1| 30S ribosomal protein S18 [Ralstonia solanacearum PSI07]
Length = 92
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L A
Sbjct: 15 QQQNPLFKRKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRSHYQRQLDTA 74
Query: 69 IKRARYLGLIAYVN 82
IKRAR+L L+ Y +
Sbjct: 75 IKRARFLALMPYTD 88
>gi|319951620|ref|YP_004162887.1| ssu ribosomal protein s18p [Cellulophaga algicola DSM 14237]
gi|319420280|gb|ADV47389.1| SSU ribosomal protein S18P [Cellulophaga algicola DSM 14237]
Length = 98
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + + ++K C G +DYKD L + ++++GK++P R++ S K QR++A A+
Sbjct: 22 LNIDTNTQKKYCRFKKSGIKYVDYKDPDFLIKLVNEQGKLLPRRLTGTSLKYQRKVAVAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYVG 94
>gi|313888625|ref|ZP_07822290.1| ribosomal protein S18 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845354|gb|EFR32750.1| ribosomal protein S18 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 74
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P +IDYKD+ L ++S RGKI+P RI+ ++ K QRE+ AI
Sbjct: 1 MQRRFGRRKKVDPFEKDKTKKIDYKDVETLRNYISDRGKILPRRITGLNAKHQREMTVAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQIALLPY 71
>gi|154247048|ref|YP_001418006.1| 30S ribosomal protein S18 [Xanthobacter autotrophicus Py2]
gi|205618870|sp|A7IK06|RS18_XANP2 RecName: Full=30S ribosomal protein S18
gi|154161133|gb|ABS68349.1| ribosomal protein S18 [Xanthobacter autotrophicus Py2]
Length = 88
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 60/72 (83%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQREL+ AI
Sbjct: 15 QRRPFFRRRKTCPFSGPNAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELSAAI 74
Query: 70 KRARYLGLIAYV 81
KR+R+LGL+ +V
Sbjct: 75 KRSRFLGLLPFV 86
>gi|313906073|ref|ZP_07839425.1| ribosomal protein S18 [Eubacterium cellulosolvens 6]
gi|313469118|gb|EFR64468.1| ribosomal protein S18 [Eubacterium cellulosolvens 6]
Length = 101
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C G IDYKD L R++S+RGKI+P R++ K QR + A+KRAR+L ++ Y
Sbjct: 40 CVFCG-KDNEIDYKDAAKLRRYISERGKILPRRVTGNCAKHQRAITLAVKRARHLAILPY 98
Query: 81 VN 82
V
Sbjct: 99 VE 100
>gi|118579197|ref|YP_900447.1| 30S ribosomal protein S18 [Pelobacter propionicus DSM 2379]
gi|166220968|sp|A1AM19|RS18_PELPD RecName: Full=30S ribosomal protein S18
gi|118501907|gb|ABK98389.1| SSU ribosomal protein S18P [Pelobacter propionicus DSM 2379]
Length = 94
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R RRK C + IDYK+ R L F+++RGKIVP RIS QRE+ +AIK
Sbjct: 18 KRRPFQRRKVCRFCAEKNLTIDYKEPRTLRYFITERGKIVPRRISGNCSAHQREITEAIK 77
Query: 71 RARYLGLIA 79
RAR L L+
Sbjct: 78 RARNLALLP 86
>gi|325285226|ref|YP_004261016.1| 30S ribosomal protein S18 [Cellulophaga lytica DSM 7489]
gi|324320680|gb|ADY28145.1| 30S ribosomal protein S18 [Cellulophaga lytica DSM 7489]
Length = 98
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + ++K C G +DYKD L + ++++GK++P R++ S K QR++A A+
Sbjct: 22 LNIETNKQKKYCRFKKSGIKYVDYKDPDFLIKLVNEQGKLLPRRLTGTSLKYQRKVAVAV 81
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ YV
Sbjct: 82 KRARHLALMPYVG 94
>gi|262279563|ref|ZP_06057348.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus RUH2202]
gi|262259914|gb|EEY78647.1| 30S ribosomal protein S18 [Acinetobacter calcoaceticus RUH2202]
Length = 75
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + + IDYKDI L +++++ GKIVPSRI+ + QR+LA AIK+A
Sbjct: 3 RFYRRRKFCRFTAENVVYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIKQA 62
Query: 73 RYLGLIAYVN 82
RYL LIAY +
Sbjct: 63 RYLSLIAYTD 72
>gi|171463205|ref|YP_001797318.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229560050|sp|B1XTM7|RS18_POLNS RecName: Full=30S ribosomal protein S18
gi|171192743|gb|ACB43704.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 84
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ + R++ C + G +IDYKD+ L F+ + KI P+R++ K QR+L AIK
Sbjct: 9 QNPLFKRKRYCRFTVAGVEQIDYKDVDTLKGFIGENAKITPARLTGTKAKYQRQLDTAIK 68
Query: 71 RARYLGLIAYVN 82
RARYL L+ + +
Sbjct: 69 RARYLALLPFSD 80
>gi|290968075|ref|ZP_06559624.1| ribosomal protein S18 [Megasphaera genomosp. type_1 str. 28L]
gi|290781981|gb|EFD94560.1| ribosomal protein S18 [Megasphaera genomosp. type_1 str. 28L]
Length = 76
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 41/70 (58%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R+ RRK C IDYKD L RF ++RGKI+P RIS V K QR+L AIKR
Sbjct: 5 RSRKPRRKVCNFCVDHVDLIDYKDTAKLRRFTTERGKILPRRISGVCAKHQRKLTIAIKR 64
Query: 72 ARYLGLIAYV 81
AR + L+ Y
Sbjct: 65 ARAIALLPYT 74
>gi|312135777|ref|YP_004003115.1| 30S ribosomal protein S18 [Caldicellulosiruptor owensensis OL]
gi|311775828|gb|ADQ05315.1| ribosomal protein S18 [Caldicellulosiruptor owensensis OL]
Length = 92
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKILPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|114568043|ref|YP_755197.1| 30S ribosomal protein S18 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338978|gb|ABI69826.1| SSU ribosomal protein S18P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 74
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYK+I L R++++RGKI+P RI+ QR+L AIKRAR + L+ Y
Sbjct: 12 CNWCADKIEVVDYKEIPRLRRYITERGKILPRRITGNCAHHQRQLTVAIKRARIMALLPY 71
Query: 81 VN 82
+
Sbjct: 72 TS 73
>gi|295105039|emb|CBL02583.1| SSU ribosomal protein S18P [Faecalibacterium prausnitzii SL3/3]
Length = 85
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +RR R+K C IDYKD+ L +++S+R KI+P R++ QR L
Sbjct: 11 PARPMRRG---RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRAL 67
Query: 66 AKAIKRARYLGLIAYVN 82
AIKRAR++ L+ YV+
Sbjct: 68 TIAIKRARHVALMPYVS 84
>gi|257871397|ref|ZP_05651050.1| ribosomal protein S18 [Enterococcus gallinarum EG2]
gi|257805561|gb|EEV34383.1| ribosomal protein S18 [Enterococcus gallinarum EG2]
Length = 78
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEHIDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTVAIKRARIMGLLP 73
Query: 80 YVN 82
+V
Sbjct: 74 FVG 76
>gi|184154485|ref|YP_001842825.1| 30S ribosomal protein S18 [Lactobacillus fermentum IFO 3956]
gi|227514127|ref|ZP_03944176.1| ribosomal protein S18 [Lactobacillus fermentum ATCC 14931]
gi|256848498|ref|ZP_05553940.1| ribosomal protein S18 [Lactobacillus coleohominis 101-4-CHN]
gi|260662546|ref|ZP_05863441.1| 30S ribosomal protein S18 [Lactobacillus fermentum 28-3-CHN]
gi|229560042|sp|B2GEV6|RS18_LACF3 RecName: Full=30S ribosomal protein S18
gi|183225829|dbj|BAG26345.1| 30S ribosomal protein S18 [Lactobacillus fermentum IFO 3956]
gi|227087498|gb|EEI22810.1| ribosomal protein S18 [Lactobacillus fermentum ATCC 14931]
gi|256714765|gb|EEU29744.1| ribosomal protein S18 [Lactobacillus coleohominis 101-4-CHN]
gi|260553237|gb|EEX26180.1| 30S ribosomal protein S18 [Lactobacillus fermentum 28-3-CHN]
Length = 78
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRRLTIAIKRARIMGLL 72
Query: 79 AYV 81
+V
Sbjct: 73 PFV 75
>gi|332654781|ref|ZP_08420523.1| ribosomal protein S18 [Ruminococcaceae bacterium D16]
gi|332516124|gb|EGJ45732.1| ribosomal protein S18 [Ruminococcaceae bacterium D16]
Length = 79
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 38/68 (55%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RRK C IDYKD L R+ S+RGKI+P R + QR+L +AIKRAR
Sbjct: 11 RKRRKVCAFCVDKVECIDYKDAAKLRRYTSERGKILPRRTTGTCAMHQRQLTEAIKRARQ 70
Query: 75 LGLIAYVN 82
+ L+ YV
Sbjct: 71 VALLPYVT 78
>gi|158319096|ref|YP_001511603.1| ribosomal protein S18 [Alkaliphilus oremlandii OhILAs]
gi|205556770|sp|A8MED6|RS18_ALKOO RecName: Full=30S ribosomal protein S18
gi|158139295|gb|ABW17607.1| ribosomal protein S18 [Alkaliphilus oremlandii OhILAs]
Length = 78
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD+ L +++++RGKI+P RIS QREL +AIKR+R++ L+
Sbjct: 15 ICVFCADKSKNIDYKDVHKLKKYITERGKILPRRISGNCAIHQRELTQAIKRSRHIALLP 74
Query: 80 YV 81
Y
Sbjct: 75 YT 76
>gi|226315507|ref|YP_002775403.1| 30S ribosomal protein S18 [Brevibacillus brevis NBRC 100599]
gi|254765413|sp|C0ZA45|RS18_BREBN RecName: Full=30S ribosomal protein S18
gi|226098457|dbj|BAH46899.1| 30S ribosomal protein S18 [Brevibacillus brevis NBRC 100599]
Length = 76
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK C IDYKDI LL +F+S+RGKI+P R++ S K QR L AIKR+R +
Sbjct: 9 KRRKVCFFKVNKIKHIDYKDIDLLKKFISERGKILPRRVTGTSAKYQRALTIAIKRSRQV 68
Query: 76 GLIAYV 81
L+ Y
Sbjct: 69 ALLPYT 74
>gi|187928273|ref|YP_001898760.1| 30S ribosomal protein S18 [Ralstonia pickettii 12J]
gi|241662846|ref|YP_002981206.1| 30S ribosomal protein S18 [Ralstonia pickettii 12D]
gi|309782228|ref|ZP_07676957.1| ribosomal protein S18 [Ralstonia sp. 5_7_47FAA]
gi|187725163|gb|ACD26328.1| ribosomal protein S18 [Ralstonia pickettii 12J]
gi|240864873|gb|ACS62534.1| ribosomal protein S18 [Ralstonia pickettii 12D]
gi|308918999|gb|EFP64667.1| ribosomal protein S18 [Ralstonia sp. 5_7_47FAA]
Length = 95
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R+K C + G +IDYKD+ L F+ + GKI P+R++ QR+L A
Sbjct: 18 QQQNPLFKRKKFCRFTVAGVEQIDYKDLDTLKDFIGENGKITPARLTGTRAIYQRQLDTA 77
Query: 69 IKRARYLGLIAYVN 82
IKRAR+L L+ Y +
Sbjct: 78 IKRARFLALMPYTD 91
>gi|158425931|ref|YP_001527223.1| 30S ribosomal protein S18 [Azorhizobium caulinodans ORS 571]
gi|205556908|sp|A8HVE8|RS18_AZOC5 RecName: Full=30S ribosomal protein S18
gi|158332820|dbj|BAF90305.1| ribosomal protein S18 [Azorhizobium caulinodans ORS 571]
Length = 85
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 46/69 (66%), Positives = 58/69 (84%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK+CP SG AP+IDYKD+RLL R++S+RGKIVPSRI++VS KKQREL+ AIKRA
Sbjct: 15 PFFRRRKTCPFSGPNAPKIDYKDVRLLQRYISERGKIVPSRITAVSAKKQRELSAAIKRA 74
Query: 73 RYLGLIAYV 81
R+LGL+ +V
Sbjct: 75 RFLGLLPFV 83
>gi|90423798|ref|YP_532168.1| 30S ribosomal protein S18 [Rhodopseudomonas palustris BisB18]
gi|122995501|sp|Q215T7|RS18_RHOPB RecName: Full=30S ribosomal protein S18
gi|90105812|gb|ABD87849.1| SSU ribosomal protein S18P [Rhodopseudomonas palustris BisB18]
Length = 79
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
R+R+LGL+ YV
Sbjct: 67 RSRFLGLLPYV 77
>gi|149372600|ref|ZP_01891712.1| 30S ribosomal protein S18 [unidentified eubacterium SCB49]
gi|149354643|gb|EDM43207.1| 30S ribosomal protein S18 [unidentified eubacterium SCB49]
Length = 98
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L + ++K C G +DYKD L RF++++GK++P R++ S K QR++A A+
Sbjct: 22 LNIETAKQKKYCRFKKSGIKYVDYKDGEWLLRFVNEQGKLLPRRLTGTSLKYQRKVAVAV 81
Query: 70 KRARYLGLIAYVN 82
KR+R+L L+ YV
Sbjct: 82 KRSRHLALMPYVT 94
>gi|109900046|ref|YP_663301.1| ribosomal protein S18 [Pseudoalteromonas atlantica T6c]
gi|332308094|ref|YP_004435945.1| ribosomal protein S18 [Glaciecola agarilytica 4H-3-7+YE-5]
gi|123064136|sp|Q15PE1|RS18_PSEA6 RecName: Full=30S ribosomal protein S18
gi|109702327|gb|ABG42247.1| SSU ribosomal protein S18P [Pseudoalteromonas atlantica T6c]
gi|332175423|gb|AEE24677.1| ribosomal protein S18 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 75
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
S G +IDYKDI +L ++++ GKIVPSRI+ S K QR+L+ AIKRAR+L L+ Y +
Sbjct: 14 SADGVVQIDYKDIAMLKNYVTESGKIVPSRITGTSAKYQRQLSTAIKRARFLALLPYTD 72
>gi|81427625|ref|YP_394622.1| 30S ribosomal protein S18 [Lactobacillus sakei subsp. sakei 23K]
gi|123742279|sp|Q38ZR6|RS18_LACSS RecName: Full=30S ribosomal protein S18
gi|78609264|emb|CAI54311.1| 30S Ribosomal protein S18 [Lactobacillus sakei subsp. sakei 23K]
Length = 79
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 41/64 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+
Sbjct: 14 KVDFIAANHIEYIDYKDTDLLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLL 73
Query: 79 AYVN 82
+V
Sbjct: 74 PFVT 77
>gi|15640395|ref|NP_230022.1| 30S ribosomal protein S18 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590975|ref|ZP_01678295.1| ribosomal protein S18 [Vibrio cholerae 2740-80]
gi|121730199|ref|ZP_01682589.1| ribosomal protein S18 [Vibrio cholerae V52]
gi|147675772|ref|YP_001218637.1| 30S ribosomal protein S18 [Vibrio cholerae O395]
gi|153216652|ref|ZP_01950559.1| ribosomal protein S18 [Vibrio cholerae 1587]
gi|153820254|ref|ZP_01972921.1| ribosomal protein S18 [Vibrio cholerae NCTC 8457]
gi|153824149|ref|ZP_01976816.1| ribosomal protein S18 [Vibrio cholerae B33]
gi|153827640|ref|ZP_01980307.1| ribosomal protein S18 [Vibrio cholerae MZO-2]
gi|153830451|ref|ZP_01983118.1| ribosomal protein S18 [Vibrio cholerae 623-39]
gi|227080580|ref|YP_002809131.1| ribosomal protein S18 [Vibrio cholerae M66-2]
gi|229504951|ref|ZP_04394462.1| SSU ribosomal protein S18p [Vibrio cholerae BX 330286]
gi|229508611|ref|ZP_04398107.1| SSU ribosomal protein S18p [Vibrio cholerae B33]
gi|229512612|ref|ZP_04402082.1| SSU ribosomal protein S18p [Vibrio cholerae TMA 21]
gi|229516023|ref|ZP_04405474.1| SSU ribosomal protein S18p [Vibrio cholerae RC9]
gi|229519925|ref|ZP_04409356.1| SSU ribosomal protein S18p [Vibrio cholerae TM 11079-80]
gi|229525062|ref|ZP_04414467.1| SSU ribosomal protein S18p [Vibrio cholerae bv. albensis VL426]
gi|229526943|ref|ZP_04416340.1| SSU ribosomal protein S18p [Vibrio cholerae 12129(1)]
gi|229606351|ref|YP_002876999.1| 30S ribosomal protein S18 [Vibrio cholerae MJ-1236]
gi|254286208|ref|ZP_04961167.1| ribosomal protein S18 [Vibrio cholerae AM-19226]
gi|254851679|ref|ZP_05241029.1| 30S ribosomal protein S18 [Vibrio cholerae MO10]
gi|255747166|ref|ZP_05421109.1| SSU ribosomal protein S18p [Vibrio cholera CIRS 101]
gi|258622405|ref|ZP_05717428.1| 30S ribosomal protein S18 [Vibrio mimicus VM573]
gi|258625990|ref|ZP_05720855.1| 30S ribosomal protein S18 [Vibrio mimicus VM603]
gi|261210395|ref|ZP_05924689.1| SSU ribosomal protein S18p [Vibrio sp. RC341]
gi|262163855|ref|ZP_06031595.1| SSU ribosomal protein S18p [Vibrio mimicus VM223]
gi|262166874|ref|ZP_06034596.1| SSU ribosomal protein S18p [Vibrio cholerae RC27]
gi|262172536|ref|ZP_06040214.1| SSU ribosomal protein S18p [Vibrio mimicus MB-451]
gi|262401541|ref|ZP_06078108.1| SSU ribosomal protein S18p [Vibrio sp. RC586]
gi|297582252|ref|ZP_06944167.1| ribosomal protein S18 [Vibrio cholerae RC385]
gi|298501265|ref|ZP_07011063.1| SSU ribosomal protein S18 [Vibrio cholerae MAK 757]
gi|11387102|sp|Q9KUZ0|RS18_VIBCH RecName: Full=30S ribosomal protein S18
gi|172047710|sp|A5F3K5|RS18_VIBC3 RecName: Full=30S ribosomal protein S18
gi|254812964|sp|C3LRA0|RS18_VIBCM RecName: Full=30S ribosomal protein S18
gi|9654785|gb|AAF93541.1| ribosomal protein S18 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547201|gb|EAX57328.1| ribosomal protein S18 [Vibrio cholerae 2740-80]
gi|121628057|gb|EAX60602.1| ribosomal protein S18 [Vibrio cholerae V52]
gi|124114163|gb|EAY32983.1| ribosomal protein S18 [Vibrio cholerae 1587]
gi|126509205|gb|EAZ71799.1| ribosomal protein S18 [Vibrio cholerae NCTC 8457]
gi|126518326|gb|EAZ75549.1| ribosomal protein S18 [Vibrio cholerae B33]
gi|146317655|gb|ABQ22194.1| ribosomal protein S18 [Vibrio cholerae O395]
gi|148874053|gb|EDL72188.1| ribosomal protein S18 [Vibrio cholerae 623-39]
gi|149737890|gb|EDM52795.1| ribosomal protein S18 [Vibrio cholerae MZO-2]
gi|150423623|gb|EDN15565.1| ribosomal protein S18 [Vibrio cholerae AM-19226]
gi|227008468|gb|ACP04680.1| ribosomal protein S18 [Vibrio cholerae M66-2]
gi|227012224|gb|ACP08434.1| ribosomal protein S18 [Vibrio cholerae O395]
gi|229335555|gb|EEO01035.1| SSU ribosomal protein S18p [Vibrio cholerae 12129(1)]
gi|229338643|gb|EEO03660.1| SSU ribosomal protein S18p [Vibrio cholerae bv. albensis VL426]
gi|229343053|gb|EEO08040.1| SSU ribosomal protein S18p [Vibrio cholerae TM 11079-80]
gi|229346926|gb|EEO11893.1| SSU ribosomal protein S18p [Vibrio cholerae RC9]
gi|229350394|gb|EEO15344.1| SSU ribosomal protein S18p [Vibrio cholerae TMA 21]
gi|229354379|gb|EEO19306.1| SSU ribosomal protein S18p [Vibrio cholerae B33]
gi|229358009|gb|EEO22925.1| SSU ribosomal protein S18p [Vibrio cholerae BX 330286]
gi|229369006|gb|ACQ59429.1| SSU ribosomal protein S18p [Vibrio cholerae MJ-1236]
gi|254847384|gb|EET25798.1| 30S ribosomal protein S18 [Vibrio cholerae MO10]
gi|255735215|gb|EET90617.1| SSU ribosomal protein S18p [Vibrio cholera CIRS 101]
gi|258581738|gb|EEW06622.1| 30S ribosomal protein S18 [Vibrio mimicus VM603]
gi|258585319|gb|EEW10045.1| 30S ribosomal protein S18 [Vibrio mimicus VM573]
gi|260840453|gb|EEX67019.1| SSU ribosomal protein S18p [Vibrio sp. RC341]
gi|261893612|gb|EEY39598.1| SSU ribosomal protein S18p [Vibrio mimicus MB-451]
gi|262024704|gb|EEY43383.1| SSU ribosomal protein S18p [Vibrio cholerae RC27]
gi|262027835|gb|EEY46500.1| SSU ribosomal protein S18p [Vibrio mimicus VM223]
gi|262352256|gb|EEZ01385.1| SSU ribosomal protein S18p [Vibrio sp. RC586]
gi|297533510|gb|EFH72356.1| ribosomal protein S18 [Vibrio cholerae RC385]
gi|297540019|gb|EFH76082.1| SSU ribosomal protein S18 [Vibrio cholerae MAK 757]
gi|327483226|gb|AEA77633.1| SSU ribosomal protein S18p [Vibrio cholerae LMA3894-4]
Length = 75
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRARYLALLPYTD 72
>gi|300870579|ref|YP_003785450.1| 30S ribosomal protein S18 [Brachyspira pilosicoli 95/1000]
gi|300688278|gb|ADK30949.1| 30S ribosomal protein S18 [Brachyspira pilosicoli 95/1000]
Length = 114
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
EV R ++K C +DYKDI+LL +++ + GKI+P R++ K Q
Sbjct: 33 EVNEKDAASRKKFFKKKICYFCKNNIDVLDYKDIKLLKKYVKESGKIIPKRLNGTCSKHQ 92
Query: 63 RELAKAIKRARYLGLIAY 80
R + KAIKRAR + L+ Y
Sbjct: 93 RLVTKAIKRARNIALLPY 110
>gi|206895301|ref|YP_002246973.1| ribosomal protein S18 [Coprothermobacter proteolyticus DSM 5265]
gi|229559979|sp|B5Y876|RS18_COPPD RecName: Full=30S ribosomal protein S18
gi|206737918|gb|ACI16996.1| ribosomal protein S18 [Coprothermobacter proteolyticus DSM 5265]
Length = 74
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 42/69 (60%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R K CPL G +DYKD+ L RF S RGKI+P R++ V QR L++AIKRA
Sbjct: 4 QRKRRIKLCPLCADGVREVDYKDVNRLRRFTSDRGKILPRRVTGVCAFHQRSLSRAIKRA 63
Query: 73 RYLGLIAYV 81
R + L+ YV
Sbjct: 64 REMALLPYV 72
>gi|291280361|ref|YP_003497196.1| 30S ribosomal protein S18 [Deferribacter desulfuricans SSM1]
gi|290755063|dbj|BAI81440.1| 30S ribosomal protein S18 [Deferribacter desulfuricans SSM1]
Length = 76
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K C + IDYKD LL +F ++RGKI+P R++ K QR LA AIK
Sbjct: 5 RRRFQRQKVCKFCTEHID-IDYKDANLLKQFTTERGKIMPRRLTGTCAKHQRRLADAIKT 63
Query: 72 ARYLGLIAYV 81
AR + L+ +
Sbjct: 64 ARIMALLPFT 73
>gi|103487385|ref|YP_616946.1| 30S ribosomal protein S18 [Sphingopyxis alaskensis RB2256]
gi|123253124|sp|Q1GRV9|RS18_SPHAL RecName: Full=30S ribosomal protein S18
gi|98977462|gb|ABF53613.1| SSU ribosomal protein S18P [Sphingopyxis alaskensis RB2256]
Length = 74
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R RRK+CP S K AP IDYKD+RLL +LS+RGKIVPSRI++VS KKQRELAKAI
Sbjct: 1 MARPFFRRRKTCPFSAKDAPVIDYKDVRLLQGYLSERGKIVPSRITAVSTKKQRELAKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++GL+ Y+
Sbjct: 61 KRARHIGLLPYI 72
>gi|299135703|ref|ZP_07028887.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX8]
gi|298601827|gb|EFI57981.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX8]
Length = 124
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + + I Y+D+RLL +F+S RGKI+P R++ S QR+L KAIK+A
Sbjct: 53 KFFRRKKVCKFTVEKIDTISYRDVRLLQQFVSDRGKIIPRRLTGTSAPFQRKLTKAIKQA 112
Query: 73 RYLGLIAY 80
R + L+ Y
Sbjct: 113 RAIALLPY 120
>gi|255020465|ref|ZP_05292530.1| SSU ribosomal protein S18p [Acidithiobacillus caldus ATCC 51756]
gi|254970075|gb|EET27572.1| SSU ribosomal protein S18p [Acidithiobacillus caldus ATCC 51756]
Length = 92
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +G IDYKD++ L F+ + GKIVPSRI+ S QR+LA AIKRAR+L L+
Sbjct: 28 KFCRFKAEGVKEIDYKDLKTLQAFIGETGKIVPSRITGTSTLYQRQLATAIKRARFLALL 87
Query: 79 AYV 81
YV
Sbjct: 88 PYV 90
>gi|78043292|ref|YP_358909.1| 30S ribosomal protein S18 [Carboxydothermus hydrogenoformans
Z-2901]
gi|123729631|sp|Q3AG25|RS18_CARHZ RecName: Full=30S ribosomal protein S18
gi|77995407|gb|ABB14306.1| ribosomal protein S18 [Carboxydothermus hydrogenoformans Z-2901]
Length = 76
Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRK-SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
+ + S R+K C +DYKD+ L +++++RGKI+P RIS + QR L
Sbjct: 1 MKKEKGSRRKKRVCAFCVDKIVDVDYKDVNRLKKYITERGKILPRRISGNCARHQRRLTT 60
Query: 68 AIKRARYLGLIAYV 81
AIKRAR + L+ +
Sbjct: 61 AIKRARIMALLPFT 74
>gi|312889160|ref|ZP_07748717.1| SSU ribosomal protein S18P [Mucilaginibacter paludis DSM 18603]
gi|311298322|gb|EFQ75434.1| SSU ribosomal protein S18P [Mucilaginibacter paludis DSM 18603]
Length = 87
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C G IDYKD L +F++ +GK++P R++ S K QR++A+A+KR+R++G
Sbjct: 18 RKKYCRFKKNGIKYIDYKDANFLLKFINDQGKLLPRRLTGTSLKFQRKVAQAVKRSRHIG 77
Query: 77 LIAYVN 82
L+ YV
Sbjct: 78 LLPYVT 83
>gi|262197682|ref|YP_003268891.1| ribosomal protein S18 [Haliangium ochraceum DSM 14365]
gi|262081029|gb|ACY16998.1| ribosomal protein S18 [Haliangium ochraceum DSM 14365]
Length = 105
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK C +DYK+ +LL F++ RGKI P RIS K QR LA AI+RAR +
Sbjct: 37 RRKVCRFCLDNTVTLDYKNAQLLKNFITDRGKITPRRISGNCAKHQRALALAIRRARMIA 96
Query: 77 LIAY 80
L+ +
Sbjct: 97 LLPF 100
>gi|158319027|ref|YP_001511535.1| 30S ribosomal protein S18 [Frankia sp. EAN1pec]
gi|288921430|ref|ZP_06415708.1| ribosomal protein S18 [Frankia sp. EUN1f]
gi|229559985|sp|A8L8T2|RS18_FRASN RecName: Full=30S ribosomal protein S18
gi|158114432|gb|ABW16629.1| ribosomal protein S18 [Frankia sp. EAN1pec]
gi|288347164|gb|EFC81463.1| ribosomal protein S18 [Frankia sp. EUN1f]
Length = 78
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R
Sbjct: 7 RKPKKKVCVFCKDKVHYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDVATAVKNSR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYTS 75
>gi|298208563|ref|YP_003716742.1| ribosomal protein S18 [Croceibacter atlanticus HTCC2559]
gi|83848486|gb|EAP86355.1| ribosomal protein S18 [Croceibacter atlanticus HTCC2559]
Length = 100
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L S + K C G IDYK+ L ++++GK++P R++ S K QR++A+A+
Sbjct: 23 LNIETSKKEKYCRFKKNGIKYIDYKNPDFLGMLVNEQGKLLPRRLTGTSLKYQRKVAQAV 82
Query: 70 KRARYLGLIAYVN 82
KRAR++ L+ YV
Sbjct: 83 KRARHIALMPYVT 95
>gi|120555297|ref|YP_959648.1| 30S ribosomal protein S18 [Marinobacter aquaeolei VT8]
gi|166220958|sp|A1U392|RS18_MARAV RecName: Full=30S ribosomal protein S18
gi|120325146|gb|ABM19461.1| SSU ribosomal protein S18P [Marinobacter aquaeolei VT8]
Length = 76
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|257439412|ref|ZP_05615167.1| ribosomal protein S18 [Faecalibacterium prausnitzii A2-165]
gi|257198071|gb|EEU96355.1| ribosomal protein S18 [Faecalibacterium prausnitzii A2-165]
Length = 71
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 5 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRALTTAIKRARHVA 64
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 65 LMPYVS 70
>gi|29374670|ref|NP_813822.1| 30S ribosomal protein S18 [Enterococcus faecalis V583]
gi|227518100|ref|ZP_03948149.1| 30S ribosomal protein S18 [Enterococcus faecalis TX0104]
gi|227555693|ref|ZP_03985740.1| 30S ribosomal protein S18 [Enterococcus faecalis HH22]
gi|229547121|ref|ZP_04435846.1| 30S ribosomal protein S18 [Enterococcus faecalis TX1322]
gi|229550691|ref|ZP_04439416.1| 30S ribosomal protein S18 [Enterococcus faecalis ATCC 29200]
gi|255971557|ref|ZP_05422143.1| ribosomal protein S18 [Enterococcus faecalis T1]
gi|255974530|ref|ZP_05425116.1| ribosomal protein S18 [Enterococcus faecalis T2]
gi|256761862|ref|ZP_05502442.1| ribosomal protein S18 [Enterococcus faecalis T3]
gi|256854989|ref|ZP_05560350.1| ribosomal protein S18 [Enterococcus faecalis T8]
gi|256957007|ref|ZP_05561178.1| ribosomal protein S18 [Enterococcus faecalis DS5]
gi|256960816|ref|ZP_05564987.1| 30S ribosomal protein S18 [Enterococcus faecalis Merz96]
gi|256963991|ref|ZP_05568162.1| 30S ribosomal protein S18 [Enterococcus faecalis HIP11704]
gi|257078684|ref|ZP_05573045.1| 30S ribosomal protein S18 [Enterococcus faecalis JH1]
gi|257081355|ref|ZP_05575716.1| 30S ribosomal protein S18 [Enterococcus faecalis E1Sol]
gi|257084012|ref|ZP_05578373.1| 30S ribosomal protein S18 [Enterococcus faecalis Fly1]
gi|257087842|ref|ZP_05582203.1| ribosomal protein S18 [Enterococcus faecalis D6]
gi|257088494|ref|ZP_05582855.1| 30S ribosomal protein S18 [Enterococcus faecalis CH188]
gi|257417434|ref|ZP_05594428.1| ribosomal protein S18 [Enterococcus faecalis AR01/DG]
gi|257418834|ref|ZP_05595828.1| 30S ribosomal protein S18 [Enterococcus faecalis T11]
gi|257421351|ref|ZP_05598341.1| 30S ribosomal protein S18 [Enterococcus faecalis X98]
gi|293382654|ref|ZP_06628582.1| ribosomal protein S18 [Enterococcus faecalis R712]
gi|293387934|ref|ZP_06632470.1| ribosomal protein S18 [Enterococcus faecalis S613]
gi|294780772|ref|ZP_06746130.1| ribosomal protein S18 [Enterococcus faecalis PC1.1]
gi|300861749|ref|ZP_07107829.1| ribosomal protein S18 [Enterococcus faecalis TUSoD Ef11]
gi|307268925|ref|ZP_07550289.1| ribosomal protein S18 [Enterococcus faecalis TX4248]
gi|307274020|ref|ZP_07555230.1| ribosomal protein S18 [Enterococcus faecalis TX0855]
gi|307276491|ref|ZP_07557611.1| ribosomal protein S18 [Enterococcus faecalis TX2134]
gi|307284067|ref|ZP_07564237.1| ribosomal protein S18 [Enterococcus faecalis TX0860]
gi|307287173|ref|ZP_07567244.1| ribosomal protein S18 [Enterococcus faecalis TX0109]
gi|307296598|ref|ZP_07576418.1| ribosomal protein S18 [Enterococcus faecalis TX0411]
gi|312901288|ref|ZP_07760571.1| ribosomal protein S18 [Enterococcus faecalis TX0470]
gi|312903115|ref|ZP_07762296.1| ribosomal protein S18 [Enterococcus faecalis TX0635]
gi|312908806|ref|ZP_07767745.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 512]
gi|312951712|ref|ZP_07770606.1| ribosomal protein S18 [Enterococcus faecalis TX0102]
gi|312979552|ref|ZP_07791234.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 516]
gi|59798885|sp|Q839Y8|RS18_ENTFA RecName: Full=30S ribosomal protein S18
gi|29342128|gb|AAO79894.1| ribosomal protein S18 [Enterococcus faecalis V583]
gi|227074448|gb|EEI12411.1| 30S ribosomal protein S18 [Enterococcus faecalis TX0104]
gi|227175151|gb|EEI56123.1| 30S ribosomal protein S18 [Enterococcus faecalis HH22]
gi|229304192|gb|EEN70188.1| 30S ribosomal protein S18 [Enterococcus faecalis ATCC 29200]
gi|229307777|gb|EEN73764.1| 30S ribosomal protein S18 [Enterococcus faecalis TX1322]
gi|255962575|gb|EET95051.1| ribosomal protein S18 [Enterococcus faecalis T1]
gi|255967402|gb|EET98024.1| ribosomal protein S18 [Enterococcus faecalis T2]
gi|256683113|gb|EEU22808.1| ribosomal protein S18 [Enterococcus faecalis T3]
gi|256709502|gb|EEU24549.1| ribosomal protein S18 [Enterococcus faecalis T8]
gi|256947503|gb|EEU64135.1| ribosomal protein S18 [Enterococcus faecalis DS5]
gi|256951312|gb|EEU67944.1| 30S ribosomal protein S18 [Enterococcus faecalis Merz96]
gi|256954487|gb|EEU71119.1| 30S ribosomal protein S18 [Enterococcus faecalis HIP11704]
gi|256986714|gb|EEU74016.1| 30S ribosomal protein S18 [Enterococcus faecalis JH1]
gi|256989385|gb|EEU76687.1| 30S ribosomal protein S18 [Enterococcus faecalis E1Sol]
gi|256992042|gb|EEU79344.1| 30S ribosomal protein S18 [Enterococcus faecalis Fly1]
gi|256995872|gb|EEU83174.1| ribosomal protein S18 [Enterococcus faecalis D6]
gi|256997306|gb|EEU83826.1| 30S ribosomal protein S18 [Enterococcus faecalis CH188]
gi|257159262|gb|EEU89222.1| ribosomal protein S18 [Enterococcus faecalis ARO1/DG]
gi|257160662|gb|EEU90622.1| 30S ribosomal protein S18 [Enterococcus faecalis T11]
gi|257163175|gb|EEU93135.1| 30S ribosomal protein S18 [Enterococcus faecalis X98]
gi|291079960|gb|EFE17324.1| ribosomal protein S18 [Enterococcus faecalis R712]
gi|291082671|gb|EFE19634.1| ribosomal protein S18 [Enterococcus faecalis S613]
gi|294452134|gb|EFG20578.1| ribosomal protein S18 [Enterococcus faecalis PC1.1]
gi|295112348|emb|CBL30985.1| SSU ribosomal protein S18P [Enterococcus sp. 7L76]
gi|300848274|gb|EFK76031.1| ribosomal protein S18 [Enterococcus faecalis TUSoD Ef11]
gi|306495934|gb|EFM65522.1| ribosomal protein S18 [Enterococcus faecalis TX0411]
gi|306501771|gb|EFM71062.1| ribosomal protein S18 [Enterococcus faecalis TX0109]
gi|306503438|gb|EFM72687.1| ribosomal protein S18 [Enterococcus faecalis TX0860]
gi|306506818|gb|EFM75968.1| ribosomal protein S18 [Enterococcus faecalis TX2134]
gi|306509328|gb|EFM78388.1| ribosomal protein S18 [Enterococcus faecalis TX0855]
gi|306514733|gb|EFM83284.1| ribosomal protein S18 [Enterococcus faecalis TX4248]
gi|310625244|gb|EFQ08527.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 512]
gi|310630285|gb|EFQ13568.1| ribosomal protein S18 [Enterococcus faecalis TX0102]
gi|310633506|gb|EFQ16789.1| ribosomal protein S18 [Enterococcus faecalis TX0635]
gi|311287734|gb|EFQ66290.1| ribosomal protein S18 [Enterococcus faecalis DAPTO 516]
gi|311291665|gb|EFQ70221.1| ribosomal protein S18 [Enterococcus faecalis TX0470]
gi|315026669|gb|EFT38601.1| ribosomal protein S18 [Enterococcus faecalis TX2137]
gi|315030114|gb|EFT42046.1| ribosomal protein S18 [Enterococcus faecalis TX4000]
gi|315033548|gb|EFT45480.1| ribosomal protein S18 [Enterococcus faecalis TX0017]
gi|315036371|gb|EFT48303.1| ribosomal protein S18 [Enterococcus faecalis TX0027]
gi|315143587|gb|EFT87603.1| ribosomal protein S18 [Enterococcus faecalis TX2141]
gi|315148275|gb|EFT92291.1| ribosomal protein S18 [Enterococcus faecalis TX4244]
gi|315151299|gb|EFT95315.1| ribosomal protein S18 [Enterococcus faecalis TX0012]
gi|315153725|gb|EFT97741.1| ribosomal protein S18 [Enterococcus faecalis TX0031]
gi|315155115|gb|EFT99131.1| ribosomal protein S18 [Enterococcus faecalis TX0043]
gi|315158755|gb|EFU02772.1| ribosomal protein S18 [Enterococcus faecalis TX0312]
gi|315163339|gb|EFU07356.1| ribosomal protein S18 [Enterococcus faecalis TX0645]
gi|315165719|gb|EFU09736.1| ribosomal protein S18 [Enterococcus faecalis TX1302]
gi|315168228|gb|EFU12245.1| ribosomal protein S18 [Enterococcus faecalis TX1341]
gi|315170504|gb|EFU14521.1| ribosomal protein S18 [Enterococcus faecalis TX1342]
gi|315174174|gb|EFU18191.1| ribosomal protein S18 [Enterococcus faecalis TX1346]
gi|315573983|gb|EFU86174.1| ribosomal protein S18 [Enterococcus faecalis TX0309B]
gi|315578847|gb|EFU91038.1| ribosomal protein S18 [Enterococcus faecalis TX0630]
gi|315581934|gb|EFU94125.1| ribosomal protein S18 [Enterococcus faecalis TX0309A]
gi|323479248|gb|ADX78687.1| ribosomal protein S18 [Enterococcus faecalis 62]
gi|327533862|gb|AEA92696.1| 30S ribosomal protein S18 [Enterococcus faecalis OG1RF]
gi|329576169|gb|EGG57687.1| ribosomal protein S18 [Enterococcus faecalis TX1467]
Length = 79
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLP 73
Query: 80 YVN 82
+V+
Sbjct: 74 FVS 76
>gi|260587267|ref|ZP_05853180.1| ribosomal protein S18 [Blautia hansenii DSM 20583]
gi|331083585|ref|ZP_08332696.1| hypothetical protein HMPREF0992_01620 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542462|gb|EEX23031.1| ribosomal protein S18 [Blautia hansenii DSM 20583]
gi|330403796|gb|EGG83348.1| hypothetical protein HMPREF0992_01620 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 87
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+P+ RR R+K C G+ I YKD L R++S+RGKI+P RI+ K QR L
Sbjct: 10 DSPMKRRGGRRRKKVCVFCGQENNEISYKDANKLKRYVSERGKILPRRITGNCAKHQRAL 69
Query: 66 AKAIKRARYLGLIAYV 81
IK+AR+L ++ YV
Sbjct: 70 TVEIKKARHLAIMPYV 85
>gi|330752552|emb|CBL87499.1| Ribosomal protein S18 [uncultured Flavobacteria bacterium]
Length = 89
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
++P + +R+ S K C G +DYKD L RFL+++GKI+P RI+ S K QR
Sbjct: 10 LSPVDIEKRSQS---KYCRFKKMGIKYVDYKDPDFLIRFLNEQGKILPRRITGNSLKFQR 66
Query: 64 ELAKAIKRARYLGLIAYV 81
+A AIKRAR L L+ YV
Sbjct: 67 RVAVAIKRARQLALLPYV 84
>gi|69246714|ref|ZP_00604082.1| Ribosomal protein S18 [Enterococcus faecium DO]
gi|227550648|ref|ZP_03980697.1| ribosomal protein S18 [Enterococcus faecium TX1330]
gi|257878654|ref|ZP_05658307.1| ribosomal protein S18 [Enterococcus faecium 1,230,933]
gi|257881320|ref|ZP_05660973.1| ribosomal protein S18 [Enterococcus faecium 1,231,502]
gi|257885595|ref|ZP_05665248.1| ribosomal protein S18 [Enterococcus faecium 1,231,501]
gi|257888087|ref|ZP_05667740.1| ribosomal protein S18 [Enterococcus faecium 1,141,733]
gi|257890537|ref|ZP_05670190.1| ribosomal protein S18 [Enterococcus faecium 1,231,410]
gi|257893112|ref|ZP_05672765.1| ribosomal protein S18 [Enterococcus faecium 1,231,408]
gi|257896295|ref|ZP_05675948.1| ribosomal protein S18 [Enterococcus faecium Com12]
gi|257899279|ref|ZP_05678932.1| ribosomal protein S18 [Enterococcus faecium Com15]
gi|258615262|ref|ZP_05713032.1| 30S ribosomal protein S18 [Enterococcus faecium DO]
gi|260558235|ref|ZP_05830431.1| ribosomal protein S18 [Enterococcus faecium C68]
gi|261206925|ref|ZP_05921614.1| ribosomal protein S18 [Enterococcus faecium TC 6]
gi|289566498|ref|ZP_06446922.1| 30S ribosomal protein S18 [Enterococcus faecium D344SRF]
gi|293379376|ref|ZP_06625520.1| ribosomal protein S18 [Enterococcus faecium PC4.1]
gi|293557087|ref|ZP_06675645.1| ribosomal protein S18 [Enterococcus faecium E1039]
gi|293563259|ref|ZP_06677711.1| ribosomal protein S18 [Enterococcus faecium E1162]
gi|293569151|ref|ZP_06680457.1| ribosomal protein S18 [Enterococcus faecium E1071]
gi|293572726|ref|ZP_06683690.1| ribosomal protein S18 [Enterococcus faecium E980]
gi|294616651|ref|ZP_06696422.1| ribosomal protein S18 [Enterococcus faecium E1636]
gi|294619753|ref|ZP_06699158.1| ribosomal protein S18 [Enterococcus faecium E1679]
gi|294623767|ref|ZP_06702595.1| ribosomal protein S18 [Enterococcus faecium U0317]
gi|314940123|ref|ZP_07847303.1| ribosomal protein S18 [Enterococcus faecium TX0133a04]
gi|314943046|ref|ZP_07849850.1| ribosomal protein S18 [Enterococcus faecium TX0133C]
gi|314948164|ref|ZP_07851560.1| ribosomal protein S18 [Enterococcus faecium TX0082]
gi|314953422|ref|ZP_07856340.1| ribosomal protein S18 [Enterococcus faecium TX0133A]
gi|314993839|ref|ZP_07859175.1| ribosomal protein S18 [Enterococcus faecium TX0133B]
gi|314998136|ref|ZP_07863018.1| ribosomal protein S18 [Enterococcus faecium TX0133a01]
gi|68195128|gb|EAN09587.1| Ribosomal protein S18 [Enterococcus faecium DO]
gi|227180214|gb|EEI61186.1| ribosomal protein S18 [Enterococcus faecium TX1330]
gi|257812882|gb|EEV41640.1| ribosomal protein S18 [Enterococcus faecium 1,230,933]
gi|257816978|gb|EEV44306.1| ribosomal protein S18 [Enterococcus faecium 1,231,502]
gi|257821451|gb|EEV48581.1| ribosomal protein S18 [Enterococcus faecium 1,231,501]
gi|257824141|gb|EEV51073.1| ribosomal protein S18 [Enterococcus faecium 1,141,733]
gi|257826897|gb|EEV53523.1| ribosomal protein S18 [Enterococcus faecium 1,231,410]
gi|257829491|gb|EEV56098.1| ribosomal protein S18 [Enterococcus faecium 1,231,408]
gi|257832860|gb|EEV59281.1| ribosomal protein S18 [Enterococcus faecium Com12]
gi|257837191|gb|EEV62265.1| ribosomal protein S18 [Enterococcus faecium Com15]
gi|260075409|gb|EEW63715.1| ribosomal protein S18 [Enterococcus faecium C68]
gi|260078553|gb|EEW66255.1| ribosomal protein S18 [Enterococcus faecium TC 6]
gi|289161707|gb|EFD09583.1| 30S ribosomal protein S18 [Enterococcus faecium D344SRF]
gi|291588120|gb|EFF19962.1| ribosomal protein S18 [Enterococcus faecium E1071]
gi|291590471|gb|EFF22209.1| ribosomal protein S18 [Enterococcus faecium E1636]
gi|291594023|gb|EFF25492.1| ribosomal protein S18 [Enterococcus faecium E1679]
gi|291596721|gb|EFF27944.1| ribosomal protein S18 [Enterococcus faecium U0317]
gi|291600750|gb|EFF31044.1| ribosomal protein S18 [Enterococcus faecium E1039]
gi|291604798|gb|EFF34280.1| ribosomal protein S18 [Enterococcus faecium E1162]
gi|291607218|gb|EFF36576.1| ribosomal protein S18 [Enterococcus faecium E980]
gi|292641899|gb|EFF60065.1| ribosomal protein S18 [Enterococcus faecium PC4.1]
gi|313587848|gb|EFR66693.1| ribosomal protein S18 [Enterococcus faecium TX0133a01]
gi|313591730|gb|EFR70575.1| ribosomal protein S18 [Enterococcus faecium TX0133B]
gi|313594525|gb|EFR73370.1| ribosomal protein S18 [Enterococcus faecium TX0133A]
gi|313598246|gb|EFR77091.1| ribosomal protein S18 [Enterococcus faecium TX0133C]
gi|313640628|gb|EFS05208.1| ribosomal protein S18 [Enterococcus faecium TX0133a04]
gi|313645418|gb|EFS09998.1| ribosomal protein S18 [Enterococcus faecium TX0082]
Length = 78
Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKDI LL RF+S+RGKI+P R++ K QR++ AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDIELLKRFISERGKILPRRVTGTGAKNQRKITVAIKRARIMGLLP 73
Query: 80 YVN 82
+V+
Sbjct: 74 FVS 76
>gi|218961877|ref|YP_001741652.1| 30S ribosomal subunit protein S18 [Candidatus Cloacamonas
acidaminovorans]
gi|167730534|emb|CAO81446.1| 30S ribosomal subunit protein S18 [Candidatus Cloacamonas
acidaminovorans]
Length = 78
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +IDYK+I +L ++S+ GKI P+R++ K QR+L IKRAR + LI Y
Sbjct: 16 CRFCANKEIQIDYKNIDVLKPYISEVGKIEPARLTGTCAKHQRKLTTEIKRARQMALIPY 75
Query: 81 V 81
V
Sbjct: 76 V 76
>gi|282882898|ref|ZP_06291503.1| ribosomal protein S18 [Peptoniphilus lacrimalis 315-B]
gi|300813419|ref|ZP_07093767.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|281297309|gb|EFA89800.1| ribosomal protein S18 [Peptoniphilus lacrimalis 315-B]
gi|300512469|gb|EFK39621.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 74
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R + R+K P +IDYKD+ +L ++S+RGKI+P RI+ ++ K QRE+ AI
Sbjct: 1 MQRRFTRRKKVDPFEKDKTKKIDYKDVDMLRNYISERGKILPRRITGLNAKHQREMTVAI 60
Query: 70 KRARYLGLIAY 80
KRAR + LI Y
Sbjct: 61 KRARQIALIPY 71
>gi|218778773|ref|YP_002430091.1| 30S ribosomal protein S18 [Desulfatibacillum alkenivorans AK-01]
gi|218760157|gb|ACL02623.1| ribosomal protein S18 [Desulfatibacillum alkenivorans AK-01]
Length = 82
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 35/63 (55%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C I+YKD R L F ++RGKIVP RIS K QR L AIKRAR + L+
Sbjct: 15 VCRFCADKTLEINYKDPRTLKYFTTERGKIVPRRISGTCAKHQRALTTAIKRARAIALMP 74
Query: 80 YVN 82
+V
Sbjct: 75 FVG 77
>gi|302343161|ref|YP_003807690.1| ribosomal protein S18 [Desulfarculus baarsii DSM 2075]
gi|301639774|gb|ADK85096.1| ribosomal protein S18 [Desulfarculus baarsii DSM 2075]
Length = 78
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK C +IDYKD R L F ++RGKI+P RIS K QREL AIK
Sbjct: 4 KKRRFGRRKVCRFCADTTIKIDYKDPRTLRYFTTERGKIIPRRISGCCAKHQRELTLAIK 63
Query: 71 RARYLGLIAY 80
R+R++ L+ +
Sbjct: 64 RSRHIALLPF 73
>gi|295697816|ref|YP_003591054.1| ribosomal protein S18 [Bacillus tusciae DSM 2912]
gi|295413418|gb|ADG07910.1| ribosomal protein S18 [Bacillus tusciae DSM 2912]
Length = 76
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C R+DYKD L +++++RGKI+P RIS + QR++ A+KRAR + L+
Sbjct: 13 VCNFCVDKIDRVDYKDADRLRKYMTERGKILPRRISGNCARHQRQVTVAVKRARQVALLP 72
Query: 80 YV 81
Y
Sbjct: 73 YT 74
>gi|304319743|ref|YP_003853386.1| 30S ribosomal protein S18 [Parvularcula bermudensis HTCC2503]
gi|303298646|gb|ADM08245.1| 30S ribosomal protein S18 [Parvularcula bermudensis HTCC2503]
Length = 74
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK+CP SG+ AP+IDYKD +LL R++S++GKIVPSRIS+VS KKQRELA+AI
Sbjct: 1 MAKTFFRRRKTCPFSGEKAPKIDYKDPKLLGRYISEKGKIVPSRISAVSAKKQRELARAI 60
Query: 70 KRARYLGLIAYVN 82
KRAR+L L+ Y
Sbjct: 61 KRARFLALLPYTT 73
>gi|147679225|ref|YP_001213440.1| 30S ribosomal protein S18 [Pelotomaculum thermopropionicum SI]
gi|205616629|sp|A5CY50|RS18_PELTS RecName: Full=30S ribosomal protein S18
gi|146275322|dbj|BAF61071.1| ribosomal protein S18 [Pelotomaculum thermopropionicum SI]
Length = 76
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 10 LRRNVSHR--RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
++R R ++ C A +DYKD++ L +++++RGKI+P RIS K QR L
Sbjct: 1 MKREKGRRGKKRICNFCVDKAEVVDYKDVQRLKKYITERGKILPRRISGNCAKHQRLLTT 60
Query: 68 AIKRARYLGLIAYV 81
AIKRAR + L+ +
Sbjct: 61 AIKRARNIALLPFT 74
>gi|291285953|ref|YP_003502769.1| 30S ribosomal protein S18 [Denitrovibrio acetiphilus DSM 12809]
gi|290883113|gb|ADD66813.1| ribosomal protein S18 [Denitrovibrio acetiphilus DSM 12809]
Length = 76
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ R+K C + IDYKD++LL +F+++RGKI+P R++ + QR+LA A+K
Sbjct: 5 KRRFQRKKVCRFCTETID-IDYKDVKLLRQFVTERGKIMPRRLTGTCARHQRQLATAVKT 63
Query: 72 ARYLGLIAY 80
AR + L+ +
Sbjct: 64 ARIIALLPF 72
>gi|299143652|ref|ZP_07036732.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518137|gb|EFI41876.1| ribosomal protein S18 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 74
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P +IDYKDI LL ++S+RGKI+P RI+ +S K QR + AI
Sbjct: 1 MQRRFRPRKKVDPFEKDKTKKIDYKDIALLRNYISERGKILPRRITGLSAKHQRAITTAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQVALLPY 71
>gi|187251761|ref|YP_001876243.1| 30S ribosomal protein S18 [Elusimicrobium minutum Pei191]
gi|226735118|sp|B2KEG0|RS18_ELUMP RecName: Full=30S ribosomal protein S18
gi|186971921|gb|ACC98906.1| Ribosomal protein S18 [Elusimicrobium minutum Pei191]
Length = 113
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
A P ++ RRK C L + +DYK+ + + F GKI+ RI+ K QR+
Sbjct: 33 AKGPFGKKRFESRRKVCKLCAEKIENVDYKNFQFIKSFTMDSGKILSRRITGTCAKHQRQ 92
Query: 65 LAKAIKRARYLGLIAY 80
+A A+KR R L ++ Y
Sbjct: 93 IASAVKRDRNLAILPY 108
>gi|145588609|ref|YP_001155206.1| ribosomal protein S18 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189029683|sp|A4SVX8|RS18_POLSQ RecName: Full=30S ribosomal protein S18
gi|145047015|gb|ABP33642.1| SSU ribosomal protein S18P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 90
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+ + R++ C + G +IDYKD+ L F+ + KI P+R++ K QR+L
Sbjct: 10 KKKPAQNPLFKRKRYCRFTVAGVEQIDYKDVDTLKDFIGENAKITPARLTGTKAKYQRQL 69
Query: 66 AKAIKRARYLGLIAYVN 82
AIKRARYL L+ + +
Sbjct: 70 DTAIKRARYLALLPFSD 86
>gi|227508138|ref|ZP_03938187.1| 30S ribosomal protein S18 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227511162|ref|ZP_03941211.1| 30S ribosomal protein S18 [Lactobacillus buchneri ATCC 11577]
gi|227523349|ref|ZP_03953398.1| 30S ribosomal protein S18 [Lactobacillus hilgardii ATCC 8290]
gi|227085644|gb|EEI20956.1| 30S ribosomal protein S18 [Lactobacillus buchneri ATCC 11577]
gi|227089455|gb|EEI24767.1| 30S ribosomal protein S18 [Lactobacillus hilgardii ATCC 8290]
gi|227192367|gb|EEI72434.1| 30S ribosomal protein S18 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 78
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD+ LL RF+S+RGKI+P R++ S K QR+L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDVDLLKRFVSERGKILPRRVTGTSAKNQRKLTIAIKRARIMGLM 72
Query: 79 AYV 81
++V
Sbjct: 73 SFV 75
>gi|313887171|ref|ZP_07820867.1| ribosomal protein S18 [Porphyromonas asaccharolytica PR426713P-I]
gi|332300447|ref|YP_004442368.1| 30S ribosomal protein S18 [Porphyromonas asaccharolytica DSM
20707]
gi|312923400|gb|EFR34213.1| ribosomal protein S18 [Porphyromonas asaccharolytica PR426713P-I]
gi|332177510|gb|AEE13200.1| 30S ribosomal protein S18 [Porphyromonas asaccharolytica DSM
20707]
Length = 88
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C G +DYKD L +FL+ +GKI+P RI+ S K QR +A+A+KRAR+L
Sbjct: 18 QQKKYCRFKKAGIKYVDYKDPEFLKKFLNDQGKILPRRITGNSLKFQRRVAQAVKRARHL 77
Query: 76 GLIAYVN 82
L+ +V
Sbjct: 78 ALLPFVT 84
>gi|237757030|ref|ZP_04585482.1| ribosomal protein S18 [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690810|gb|EEP59966.1| ribosomal protein S18 [Sulfurihydrogenibium yellowstonense SS-5]
Length = 79
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ R+K C + +YKDI L F+S+RGKI+PSRIS K QR+LA IK
Sbjct: 8 KPYFPKRKKYCKFCAEKKEP-NYKDIETLKGFISERGKIIPSRISGTCAKHQRKLAVEIK 66
Query: 71 RARYLGLIAYV 81
+AR L L+ YV
Sbjct: 67 KARQLALLPYV 77
>gi|257866284|ref|ZP_05645937.1| ribosomal protein S18 [Enterococcus casseliflavus EC30]
gi|257873200|ref|ZP_05652853.1| ribosomal protein S18 [Enterococcus casseliflavus EC10]
gi|257875901|ref|ZP_05655554.1| ribosomal protein S18 [Enterococcus casseliflavus EC20]
gi|325567633|ref|ZP_08144300.1| 30S ribosomal protein S18 [Enterococcus casseliflavus ATCC 12755]
gi|257800242|gb|EEV29270.1| ribosomal protein S18 [Enterococcus casseliflavus EC30]
gi|257807364|gb|EEV36186.1| ribosomal protein S18 [Enterococcus casseliflavus EC10]
gi|257810067|gb|EEV38887.1| ribosomal protein S18 [Enterococcus casseliflavus EC20]
gi|325159066|gb|EGC71212.1| 30S ribosomal protein S18 [Enterococcus casseliflavus ATCC 12755]
Length = 78
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKDI LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEHIDYKDIELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLP 73
Query: 80 YVN 82
+V
Sbjct: 74 FVG 76
>gi|225873662|ref|YP_002755121.1| ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
gi|254765401|sp|C1F903|RS18_ACIC5 RecName: Full=30S ribosomal protein S18
gi|225791607|gb|ACO31697.1| ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
Length = 105
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + I Y+D+RLL +F+++RGKIVP R++ V QR L +AIK+A
Sbjct: 34 KFFRRKKVCKFCTEKIDAIPYRDVRLLQQFVAERGKIVPRRLTGVCTTHQRRLTRAIKQA 93
Query: 73 RYLGLIAY 80
R + L+ +
Sbjct: 94 RNIALLPF 101
>gi|50364897|ref|YP_053322.1| 30S ribosomal protein S18 [Mesoplasma florum L1]
gi|59798695|sp|Q6F235|RS18_MESFL RecName: Full=30S ribosomal protein S18
gi|50363453|gb|AAT75438.1| 30S ribosomal protein S18 [Mesoplasma florum L1]
Length = 76
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+ YV
Sbjct: 16 FAKNKINYIDYKDVELLKKFISGNGQILPRRITGTSPKHQRQLAVAIKRARQMALLPYV 74
>gi|116515284|ref|YP_802913.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285320|sp|Q056X9|RS18_BUCCC RecName: Full=30S ribosomal protein S18
gi|116257138|gb|ABJ90820.1| 30S ribosomal protein S18 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 75
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RRK C + +G +IDYKDI +L ++++ GKIVPSRI+ K QR+L++AIK A
Sbjct: 3 RYFRRRKFCRFTAEGIKKIDYKDIMILKNYITENGKIVPSRITGTKAKYQRQLSRAIKIA 62
Query: 73 RYLGLIAYVN 82
R+LG I Y +
Sbjct: 63 RFLGFIPYTD 72
>gi|313902809|ref|ZP_07836206.1| SSU ribosomal protein S18P [Thermaerobacter subterraneus DSM
13965]
gi|313466929|gb|EFR62446.1| SSU ribosomal protein S18P [Thermaerobacter subterraneus DSM
13965]
Length = 75
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYKD L +FL++RGKI+P RI+ QR+L +AIKRAR + L+
Sbjct: 12 VCEFCVNRIAVVDYKDSARLRKFLTERGKILPRRITGNCAGHQRQLTRAIKRARIMALLP 71
Query: 80 YV 81
+
Sbjct: 72 FT 73
>gi|295106369|emb|CBL03912.1| SSU ribosomal protein S18P [Gordonibacter pamelaeae 7-10-1-b]
Length = 86
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M++ A P RRK C A +DYKD ++L ++++ RGKI P R++ +
Sbjct: 1 MSDYAKQP--------RRKFCQFCKDEANYVDYKDTQMLRKYVTDRGKIKPRRVTGACTQ 52
Query: 61 KQRELAKAIKRARYLGLIAY 80
QR++A A+KRAR + L+ Y
Sbjct: 53 HQRDIANAVKRAREMALMPY 72
>gi|291545083|emb|CBL18192.1| SSU ribosomal protein S18P [Ruminococcus sp. 18P13]
Length = 80
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R+K C IDYKDI L + ++ R KI+P R++ QREL AIK
Sbjct: 8 RGGKRPRKKVCMFCVDRVETIDYKDIARLRKCMTDRAKILPRRVTGTCAFHQRELTVAIK 67
Query: 71 RARYLGLIAYVN 82
RAR++ L+ YV+
Sbjct: 68 RARHIALLPYVS 79
>gi|332529061|ref|ZP_08405026.1| 30S ribosomal protein S18 [Hylemonella gracilis ATCC 19624]
gi|332041505|gb|EGI77866.1| 30S ribosomal protein S18 [Hylemonella gracilis ATCC 19624]
Length = 93
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L L+ Y +
Sbjct: 70 RQLNTAIKRARFLALLPYTD 89
>gi|317123154|ref|YP_004103157.1| 30S ribosomal protein S18P [Thermaerobacter marianensis DSM
12885]
gi|315593134|gb|ADU52430.1| SSU ribosomal protein S18P [Thermaerobacter marianensis DSM
12885]
Length = 75
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C +DYKD L +FL++RGKI+P RI+ + QR+L +AIKRAR + L+
Sbjct: 12 VCEFCVNRIAVVDYKDAGRLRKFLTERGKILPRRITGNCARHQRQLTRAIKRARIMALLP 71
Query: 80 YV 81
+
Sbjct: 72 FT 73
>gi|254784760|ref|YP_003072188.1| 30S ribosomal protein S18 [Teredinibacter turnerae T7901]
gi|259494820|sp|C5BN46|RS18_TERTT RecName: Full=30S ribosomal protein S18
gi|237683566|gb|ACR10830.1| ribosomal protein S18 [Teredinibacter turnerae T7901]
Length = 75
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLETLKAYISETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYTD 72
>gi|257789801|ref|YP_003180407.1| 30S ribosomal protein S18 [Eggerthella lenta DSM 2243]
gi|317489260|ref|ZP_07947777.1| ribosomal protein S18 [Eggerthella sp. 1_3_56FAA]
gi|325832274|ref|ZP_08165273.1| ribosomal protein S18 [Eggerthella sp. HGA1]
gi|257473698|gb|ACV54018.1| ribosomal protein S18 [Eggerthella lenta DSM 2243]
gi|316911661|gb|EFV33253.1| ribosomal protein S18 [Eggerthella sp. 1_3_56FAA]
gi|325486110|gb|EGC88564.1| ribosomal protein S18 [Eggerthella sp. HGA1]
Length = 86
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M++ A P RRK C + IDYKD ++L ++++ RGKI P R++ +
Sbjct: 1 MSDYAKQP--------RRKFCQFCKEDTQYIDYKDTQMLRKYVTDRGKIKPRRVTGACTQ 52
Query: 61 KQRELAKAIKRARYLGLIAY 80
QR++A A+KRAR + L+ Y
Sbjct: 53 HQRDIANAVKRAREMALMPY 72
>gi|298530249|ref|ZP_07017651.1| ribosomal protein S18 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509623|gb|EFI33527.1| ribosomal protein S18 [Desulfonatronospira thiodismutans ASO3-1]
Length = 85
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
++ + + R+K C +DYK++ +L F++ RGKI+ RI+ K QR L
Sbjct: 1 MVYKKFAPRKKFCRFCASKENILDYKNVDMLKDFITDRGKIIARRITGNCAKHQRALTTE 60
Query: 69 IKRARYLGLIAYV 81
IK+AR + L+ Y
Sbjct: 61 IKKARQMALLYYT 73
>gi|283768493|ref|ZP_06341405.1| ribosomal protein S18 [Bulleidia extructa W1219]
gi|283104885|gb|EFC06257.1| ribosomal protein S18 [Bulleidia extructa W1219]
Length = 76
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ RRK C + IDYKD+ LL +F+S KI P R++ K QR LA AI
Sbjct: 3 FRKQRMGRRKVCYFTKNNIKFIDYKDVELLKKFISPNAKITPRRVTGTRAKYQRPLAIAI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 63 KRARQMALLPYV 74
>gi|271970520|ref|YP_003344716.1| 30S ribosomal protein S18 [Streptosporangium roseum DSM 43021]
gi|270513695|gb|ACZ91973.1| 30S ribosomal protein S18 [Streptosporangium roseum DSM 43021]
Length = 78
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P LR+ ++K C +DYKD LL +F+S RGKI R++ + QR++A
Sbjct: 3 KPALRKP---KKKVCLFCHDKISYVDYKDTALLRKFISDRGKIRARRVTGNCTQHQRDVA 59
Query: 67 KAIKRARYLGLIAYVN 82
AIK AR + L+ Y++
Sbjct: 60 TAIKNAREMALLPYMS 75
>gi|189501828|ref|YP_001957545.1| 30S ribosomal protein S18 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497269|gb|ACE05816.1| hypothetical protein Aasi_0398 [Candidatus Amoebophilus asiaticus
5a2]
Length = 83
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
++K C G +DYK++ L RFL+++GKI+P RIS S K Q+++A+AIKRA
Sbjct: 10 RRHTKKKYCRFKKLGIKYVDYKNLDFLFRFLNEQGKILPRRISGNSLKYQKKVAQAIKRA 69
Query: 73 RYLGLIAYVN 82
R+L L+ YV
Sbjct: 70 RHLALLPYVT 79
>gi|312200937|ref|YP_004020998.1| ribosomal protein S18 [Frankia sp. EuI1c]
gi|311232273|gb|ADP85128.1| ribosomal protein S18 [Frankia sp. EuI1c]
Length = 78
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R
Sbjct: 7 RKPKKKVCVFCKDKTEYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDVAIAVKNSR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYTS 75
>gi|261414896|ref|YP_003248579.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371352|gb|ACX74097.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326241|gb|ADL25442.1| ribosomal protein S18 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 83
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R+K+C + IDYKD + L RF+S+RGKI+P RIS S K QR L +AIKRAR +
Sbjct: 13 RRKKTCWFTENNVKFIDYKDEKTLRRFISERGKIIPRRISGTSAKYQRMLNEAIKRARQM 72
Query: 76 GLIAYVN 82
++ +V+
Sbjct: 73 AILPFVS 79
>gi|188587503|ref|YP_001919048.1| SSU ribosomal protein S18P [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|205558577|sp|B2A454|RS18_NATTJ RecName: Full=30S ribosomal protein S18
gi|179352190|gb|ACB86460.1| SSU ribosomal protein S18P [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 74
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R K C + + YKD+ L +++++RGKI+P RI+ K QR+L AIK+A
Sbjct: 3 RRRRRNKVCSFCAEKTTTVSYKDLDRLKKYITERGKILPRRINGNCAKHQRQLTTAIKKA 62
Query: 73 RYLGLIAYV 81
R L L+ Y
Sbjct: 63 RQLALLPYT 71
>gi|268609247|ref|ZP_06142974.1| 30S ribosomal protein S18 [Ruminococcus flavefaciens FD-1]
Length = 80
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + R+K C RIDYKD+ L + +++R KI+P R++ QREL AIK
Sbjct: 8 RPSKKPRKKVCMFCADRIERIDYKDLAKLRKCMTERAKILPRRVTGTCAFHQRELTVAIK 67
Query: 71 RARYLGLIAYVN 82
RAR++ L+ Y++
Sbjct: 68 RARHIALLPYIS 79
>gi|39995772|ref|NP_951723.1| 30S ribosomal protein S18 [Geobacter sulfurreducens PCA]
gi|59798802|sp|Q74FE3|RS18_GEOSL RecName: Full=30S ribosomal protein S18
gi|39982536|gb|AAR33996.1| ribosomal protein S18 [Geobacter sulfurreducens PCA]
gi|307634729|gb|ADI83505.2| ribosomal protein S18 [Geobacter sulfurreducens KN400]
Length = 103
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R RRK C IDYKD R+L F+++RGKIVP RIS QRE+ +AIK
Sbjct: 27 KRRPFQRRKVCRFCADKTLVIDYKDPRVLRSFITERGKIVPRRISGNCSAHQREITEAIK 86
Query: 71 RARYLGLIA 79
RAR + LI
Sbjct: 87 RARNIALIP 95
>gi|317152940|ref|YP_004120988.1| 30S ribosomal protein S18 [Desulfovibrio aespoeensis Aspo-2]
gi|316943191|gb|ADU62242.1| ribosomal protein S18 [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + R+K C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FRKKFTPRKKFCRFCADQELPLDYKRTDILRDFVTERGKIIARRITGTCAKHQRRLTNEI 62
Query: 70 KRARYLGLIAYVNL 83
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTTV 76
>gi|160944120|ref|ZP_02091350.1| hypothetical protein FAEPRAM212_01622 [Faecalibacterium
prausnitzii M21/2]
gi|313113168|ref|ZP_07798794.1| ribosomal protein S18 [Faecalibacterium cf. prausnitzii KLE1255]
gi|158444796|gb|EDP21800.1| hypothetical protein FAEPRAM212_01622 [Faecalibacterium
prausnitzii M21/2]
gi|310624507|gb|EFQ07836.1| ribosomal protein S18 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 71
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K C IDYKD+ L +++S+R KI+P R++ QR L AIKRAR++
Sbjct: 5 RKKVCSFCVDRIDTIDYKDVPRLRKYVSERAKIIPRRVTGTCAYHQRALTIAIKRARHVA 64
Query: 77 LIAYVN 82
L+ YV+
Sbjct: 65 LMPYVS 70
>gi|28376983|ref|NP_783875.1| 30S ribosomal protein S18 [Lactobacillus plantarum WCFS1]
gi|254555178|ref|YP_003061595.1| 30S ribosomal protein S18 [Lactobacillus plantarum JDM1]
gi|300769114|ref|ZP_07079003.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179200|ref|YP_003923328.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|38258549|sp|Q890K0|RS18_LACPL RecName: Full=30S ribosomal protein S18
gi|28269814|emb|CAD62711.1| ribosomal protein S18 [Lactobacillus plantarum WCFS1]
gi|254044105|gb|ACT60898.1| 30S ribosomal protein S18 [Lactobacillus plantarum JDM1]
gi|300493354|gb|EFK28533.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308044691|gb|ADN97234.1| 30S ribosomal protein S18 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 78
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K ++ IDYKD LL RF+S+RGKI+P R++ S K QR L AIKRAR +GL+
Sbjct: 13 KVDFIAANHIEYIDYKDTDLLRRFISERGKILPRRVTGTSAKNQRSLTIAIKRARIMGLL 72
Query: 79 AYVN 82
A+V+
Sbjct: 73 AFVS 76
>gi|312621642|ref|YP_004023255.1| 30S ribosomal protein S18 [Caldicellulosiruptor kronotskyensis
2002]
gi|312202109|gb|ADQ45436.1| ribosomal protein S18 [Caldicellulosiruptor kronotskyensis 2002]
Length = 92
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|254283309|ref|ZP_04958277.1| ribosomal protein S18 [gamma proteobacterium NOR51-B]
gi|219679512|gb|EED35861.1| ribosomal protein S18 [gamma proteobacterium NOR51-B]
Length = 75
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L +++++ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLETLKQYVTETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYSD 72
>gi|225181169|ref|ZP_03734615.1| ribosomal protein S18 [Dethiobacter alkaliphilus AHT 1]
gi|225168138|gb|EEG76943.1| ribosomal protein S18 [Dethiobacter alkaliphilus AHT 1]
Length = 76
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C IDYK L RF+++RGKI+P RIS K QR+L AIKRAR + L+
Sbjct: 12 KVCNFCVDKVQNIDYKLTGKLARFVTERGKILPRRISGNCAKHQRQLTIAIKRARNIALL 71
Query: 79 AYVN 82
Y
Sbjct: 72 PYST 75
>gi|159901475|ref|YP_001547722.1| 30S ribosomal protein S18 [Herpetosiphon aurantiacus ATCC 23779]
gi|205558504|sp|A9B461|RS18_HERA2 RecName: Full=30S ribosomal protein S18
gi|159894514|gb|ABX07594.1| ribosomal protein S18 [Herpetosiphon aurantiacus ATCC 23779]
Length = 86
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M++ RR + RRK C + +G DYKDI+ L R +S RGKI+P R + K
Sbjct: 1 MSDQRRKSAGRRKYTPRRKVCVFTAEGIVP-DYKDIKRLQRMVSDRGKILPRRRTGTCAK 59
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR+L L+ +V+
Sbjct: 60 YQRKLNVAIKRARHLALLPFVS 81
>gi|90020705|ref|YP_526532.1| 30S ribosomal protein S18 [Saccharophagus degradans 2-40]
gi|122996417|sp|Q21LV9|RS18_SACD2 RecName: Full=30S ribosomal protein S18
gi|89950305|gb|ABD80320.1| SSU ribosomal protein S18P [Saccharophagus degradans 2-40]
Length = 75
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRAR++ L+ Y +
Sbjct: 14 TAEGVKSIDYKDLDTLKAYVSETGKIVPSRITGTKAKYQRQLATAIKRARFIALLPYTD 72
>gi|329896991|ref|ZP_08271784.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC3088]
gi|328921499|gb|EGG28884.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC3088]
Length = 75
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ K QR+LA A+KRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLETLKAYITETGKIVPSRITGTKAKYQRQLATAVKRARYLALLPYTD 72
>gi|170751790|ref|YP_001758050.1| 30S ribosomal protein S18 [Methylobacterium radiotolerans JCM
2831]
gi|205558300|sp|B1LYI3|RS18_METRJ RecName: Full=30S ribosomal protein S18
gi|170658312|gb|ACB27367.1| ribosomal protein S18 [Methylobacterium radiotolerans JCM 2831]
Length = 83
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 58/63 (92%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 19 KTCPFSGANAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 78
Query: 79 AYV 81
YV
Sbjct: 79 PYV 81
>gi|269959107|ref|YP_003328896.1| 30S ribosomal protein S18 [Anaplasma centrale str. Israel]
gi|269848938|gb|ACZ49582.1| 30S ribosomal protein S18 [Anaplasma centrale str. Israel]
Length = 96
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A +P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS KK
Sbjct: 17 AAHSPLVYLKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSKK 76
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+ LA+A+KRAR+L L+ Y
Sbjct: 77 QKLLARAVKRARFLALLPYC 96
>gi|284034855|ref|YP_003384786.1| 30S ribosomal protein S18 [Kribbella flavida DSM 17836]
gi|283814148|gb|ADB35987.1| ribosomal protein S18 [Kribbella flavida DSM 17836]
Length = 77
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + ++K C A +DYKD LL +F+S RGKI R++ + QR++A A
Sbjct: 1 MAKIIRKPKKKVCGFCKDKATYVDYKDTALLRKFISDRGKIRARRVTGNCVQHQRDVATA 60
Query: 69 IKRARYLGLIAYVN 82
IK AR + L+ Y +
Sbjct: 61 IKNAREVALLPYTS 74
>gi|89094156|ref|ZP_01167099.1| 30S ribosomal protein S18 [Oceanospirillum sp. MED92]
gi|89081631|gb|EAR60860.1| 30S ribosomal protein S18 [Oceanospirillum sp. MED92]
Length = 75
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRAR++ L+ Y +
Sbjct: 14 TAEGVQEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARFVALLPYTD 72
>gi|209964875|ref|YP_002297790.1| ribosomal protein S18 [Rhodospirillum centenum SW]
gi|209958341|gb|ACI98977.1| ribosomal protein S18 [Rhodospirillum centenum SW]
Length = 89
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP IDYKD++LL+RF+S+RGKIVPSRI++VS KKQRELA+AIKRAR+L L+
Sbjct: 25 KTCPFSGPNAPAIDYKDVKLLSRFISERGKIVPSRITAVSAKKQRELARAIKRARFLALL 84
Query: 79 AYV 81
YV
Sbjct: 85 PYV 87
>gi|323698324|ref|ZP_08110236.1| ribosomal protein S18 [Desulfovibrio sp. ND132]
gi|323458256|gb|EGB14121.1| ribosomal protein S18 [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + R+K C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FRKKFTPRKKFCRFCADAELPLDYKRPDILRDFVTERGKIIARRITGTCAKHQRRLTNEI 62
Query: 70 KRARYLGLIAYVNL 83
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTTV 76
>gi|148657503|ref|YP_001277708.1| 30S ribosomal protein S18 [Roseiflexus sp. RS-1]
gi|205556677|sp|A5UYQ5|RS182_ROSS1 RecName: Full=30S ribosomal protein S18 2
gi|148569613|gb|ABQ91758.1| SSU ribosomal protein S18P [Roseiflexus sp. RS-1]
Length = 90
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C +DYKD++ L R +S+RGKI+P R + V + QR L AIKRAR++ L+
Sbjct: 22 KVCMFCADQIRVVDYKDVKRLQRCMSERGKILPRRRTGVCARHQRSLTVAIKRARHMALL 81
Query: 79 AYV 81
+V
Sbjct: 82 PFV 84
>gi|116491827|ref|YP_803562.1| SSU ribosomal protein S18P [Pediococcus pentosaceus ATCC 25745]
gi|122266709|sp|Q03I52|RS18_PEDPA RecName: Full=30S ribosomal protein S18
gi|116101977|gb|ABJ67120.1| SSU ribosomal protein S18P [Pediococcus pentosaceus ATCC 25745]
Length = 78
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDTELLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLLP 73
Query: 80 YV 81
+V
Sbjct: 74 FV 75
>gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC
51172]
gi|227235569|gb|EEI85584.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC
51172]
Length = 74
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AI
Sbjct: 1 MARRFKPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAI 60
Query: 70 KRARYLGLIAY 80
KRAR + L+ Y
Sbjct: 61 KRARQVALLPY 71
>gi|270289884|ref|ZP_06196110.1| 30S ribosomal protein S18 [Pediococcus acidilactici 7_4]
gi|304385863|ref|ZP_07368207.1| 30S ribosomal protein S18 [Pediococcus acidilactici DSM 20284]
gi|270281421|gb|EFA27253.1| 30S ribosomal protein S18 [Pediococcus acidilactici 7_4]
gi|304328367|gb|EFL95589.1| 30S ribosomal protein S18 [Pediococcus acidilactici DSM 20284]
Length = 78
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKD LL RF+S+RGKI+P R+S S K QR L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDTELLKRFISERGKILPRRVSGTSAKNQRRLTIAIKRARIMGLLP 73
Query: 80 YV 81
+V
Sbjct: 74 FV 75
>gi|49082502|gb|AAT50651.1| PA4934 [synthetic construct]
Length = 77
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLRAYVSETGKIVPSRITGTKAKYQRQLATAIKRARYLALLPYTD 72
>gi|312126896|ref|YP_003991770.1| 30S ribosomal protein S18 [Caldicellulosiruptor hydrothermalis
108]
gi|311776915|gb|ADQ06401.1| ribosomal protein S18 [Caldicellulosiruptor hydrothermalis 108]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|78356456|ref|YP_387905.1| 30S ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123741297|sp|Q312D6|RS18_DESDG RecName: Full=30S ribosomal protein S18
gi|78218861|gb|ABB38210.1| SSU ribosomal protein S18P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 87
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C I+YK +L F+++RGKI+ RI+ QR L I
Sbjct: 3 FKKRFTPRRKFCRFCADKDLPINYKRPDILRDFVTERGKIIARRITGTCAHHQRLLTTEI 62
Query: 70 KRARYLGLIAYVN 82
KRAR + L+ Y +
Sbjct: 63 KRARQMALLFYTS 75
>gi|121595517|ref|YP_987413.1| 30S ribosomal protein S18 [Acidovorax sp. JS42]
gi|222111738|ref|YP_002554002.1| 30S ribosomal protein s18 [Acidovorax ebreus TPSY]
gi|166220919|sp|A1WAR2|RS18_ACISJ RecName: Full=30S ribosomal protein S18
gi|254765424|sp|B9MDJ3|RS18_DIAST RecName: Full=30S ribosomal protein S18
gi|120607597|gb|ABM43337.1| SSU ribosomal protein S18P [Acidovorax sp. JS42]
gi|221731182|gb|ACM34002.1| ribosomal protein S18 [Acidovorax ebreus TPSY]
Length = 93
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L L+ Y +
Sbjct: 70 RQLNTAIKRARFLALLPYSD 89
>gi|289641251|ref|ZP_06473418.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
gi|289509013|gb|EFD29945.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
Length = 78
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C IDYKD LL +F+S RGKI R++ + QR++A A+K +R
Sbjct: 7 RKPKKKVCVFCKDKTDYIDYKDTSLLRKFISDRGKIRARRVTGNCSQHQRDIAIAVKNSR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYTS 75
>gi|325479860|gb|EGC82945.1| ribosomal protein S18 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 75
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKR
Sbjct: 4 RRFRPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREVTRAIKR 63
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 64 ARQVALLPY 72
>gi|83644550|ref|YP_432985.1| ribosomal protein S18 [Hahella chejuensis KCTC 2396]
gi|123739986|sp|Q2SLB4|RS18_HAHCH RecName: Full=30S ribosomal protein S18
gi|83632593|gb|ABC28560.1| ribosomal protein S18 [Hahella chejuensis KCTC 2396]
Length = 76
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ +L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDVEVLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|302872491|ref|YP_003841127.1| ribosomal protein S18 [Caldicellulosiruptor obsidiansis OB47]
gi|302575350|gb|ADL43141.1| ribosomal protein S18 [Caldicellulosiruptor obsidiansis OB47]
Length = 92
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|92113017|ref|YP_572945.1| SSU ribosomal protein S18P [Chromohalobacter salexigens DSM 3043]
gi|123084170|sp|Q1QZ62|RS18_CHRSD RecName: Full=30S ribosomal protein S18
gi|91796107|gb|ABE58246.1| SSU ribosomal protein S18P [Chromohalobacter salexigens DSM 3043]
Length = 75
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKDI L ++++ GKIVPSRI+ + QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGVKYIDYKDIDTLKSYITETGKIVPSRITGTKARYQRQLSTAIKRARYLALLPYTD 72
>gi|325679786|ref|ZP_08159360.1| ribosomal protein S18 [Ruminococcus albus 8]
gi|324108601|gb|EGC02843.1| ribosomal protein S18 [Ruminococcus albus 8]
Length = 83
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 12 RNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R V R+K C A +IDYKDI L + +++R KI+P R++ QREL KAIK
Sbjct: 11 RPVKRGRKKVCMFCVDRAEKIDYKDIAKLRKCMTERAKILPRRVTGTCAYHQRELTKAIK 70
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 71 RARHVALLPYV 81
>gi|256618519|ref|ZP_05475365.1| ribosomal protein S18 [Enterococcus faecalis ATCC 4200]
gi|256598046|gb|EEU17222.1| ribosomal protein S18 [Enterococcus faecalis ATCC 4200]
Length = 79
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
++ IDYKD LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+
Sbjct: 14 VDYIAANHIEYIDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLP 73
Query: 80 YVN 82
+V+
Sbjct: 74 FVS 76
>gi|209885493|ref|YP_002289350.1| ribosomal protein S18 [Oligotropha carboxidovorans OM5]
gi|229560048|sp|B6JGW4|RS18_OLICO RecName: Full=30S ribosomal protein S18
gi|209873689|gb|ACI93485.1| ribosomal protein S18 [Oligotropha carboxidovorans OM5]
Length = 79
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+ID+KD +LL R++S+RGKIVPSRI++VS KQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGSNAPKIDFKDSKLLMRYVSERGKIVPSRITAVSALKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|27364783|ref|NP_760311.1| 30S ribosomal protein S18 [Vibrio vulnificus CMCP6]
gi|28899512|ref|NP_799117.1| 30S ribosomal protein S18 [Vibrio parahaemolyticus RIMD 2210633]
gi|37681166|ref|NP_935775.1| 30S ribosomal protein S18 [Vibrio vulnificus YJ016]
gi|84393175|ref|ZP_00991939.1| 30S ribosomal protein S18 [Vibrio splendidus 12B01]
gi|86148223|ref|ZP_01066520.1| 30S ribosomal protein S18 [Vibrio sp. MED222]
gi|91227275|ref|ZP_01261700.1| 30S ribosomal protein S18 [Vibrio alginolyticus 12G01]
gi|148981037|ref|ZP_01816257.1| 30S ribosomal protein S18 [Vibrionales bacterium SWAT-3]
gi|149191590|ref|ZP_01869835.1| 30S ribosomal protein S18 [Vibrio shilonii AK1]
gi|153835847|ref|ZP_01988514.1| ribosomal protein S18 [Vibrio harveyi HY01]
gi|153846004|ref|ZP_01993817.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ3810]
gi|156972401|ref|YP_001443308.1| 30S ribosomal protein S18 [Vibrio harveyi ATCC BAA-1116]
gi|163803111|ref|ZP_02196995.1| 30S ribosomal protein S18 [Vibrio sp. AND4]
gi|218708334|ref|YP_002415955.1| 30S ribosomal protein S18 [Vibrio splendidus LGP32]
gi|260366343|ref|ZP_05778789.1| ribosomal protein S18 [Vibrio parahaemolyticus K5030]
gi|260767147|ref|ZP_05876091.1| SSU ribosomal protein S18p [Vibrio furnissii CIP 102972]
gi|260773678|ref|ZP_05882594.1| SSU ribosomal protein S18p [Vibrio metschnikovii CIP 69.14]
gi|260775635|ref|ZP_05884532.1| SSU ribosomal protein S18p [Vibrio coralliilyticus ATCC BAA-450]
gi|260879410|ref|ZP_05891765.1| ribosomal protein S18 [Vibrio parahaemolyticus AN-5034]
gi|260896871|ref|ZP_05905367.1| ribosomal protein S18 [Vibrio parahaemolyticus Peru-466]
gi|260902023|ref|ZP_05910418.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ4037]
gi|261254037|ref|ZP_05946610.1| SSU ribosomal protein S18p [Vibrio orientalis CIP 102891]
gi|262393107|ref|YP_003284961.1| 30S ribosomal protein S18p [Vibrio sp. Ex25]
gi|269961474|ref|ZP_06175838.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269964320|ref|ZP_06178568.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269964440|ref|ZP_06178681.1| 30S ribosomal protein S18 [Vibrio alginolyticus 40B]
gi|312881936|ref|ZP_07741693.1| 30S ribosomal protein S18 [Vibrio caribbenthicus ATCC BAA-2122]
gi|320155177|ref|YP_004187556.1| 30S ribosomal protein S18p [Vibrio vulnificus MO6-24/O]
gi|323493029|ref|ZP_08098164.1| 30S ribosomal protein S18 [Vibrio brasiliensis LMG 20546]
gi|323496054|ref|ZP_08101114.1| 30S ribosomal protein S18 [Vibrio sinaloensis DSM 21326]
gi|54039420|sp|P66479|RS18_VIBVU RecName: Full=30S ribosomal protein S18
gi|54042152|sp|P66478|RS18_VIBPA RecName: Full=30S ribosomal protein S18
gi|59798812|sp|Q7MH90|RS18_VIBVY RecName: Full=30S ribosomal protein S18
gi|166222256|sp|A7MSX6|RS18_VIBHB RecName: Full=30S ribosomal protein S18
gi|254812965|sp|B7VI66|RS18_VIBSL RecName: Full=30S ribosomal protein S18
gi|27360928|gb|AAO09838.1| ribosomal protein S18 [Vibrio vulnificus CMCP6]
gi|28807748|dbj|BAC61001.1| ribosomal protein S18 [Vibrio parahaemolyticus RIMD 2210633]
gi|37199917|dbj|BAC95746.1| ribosomal protein S18 [Vibrio vulnificus YJ016]
gi|84376227|gb|EAP93111.1| 30S ribosomal protein S18 [Vibrio splendidus 12B01]
gi|85833993|gb|EAQ52154.1| 30S ribosomal protein S18 [Vibrio sp. MED222]
gi|91188669|gb|EAS74958.1| 30S ribosomal protein S18 [Vibrio alginolyticus 12G01]
gi|145961013|gb|EDK26336.1| 30S ribosomal protein S18 [Vibrionales bacterium SWAT-3]
gi|148834548|gb|EDL51540.1| 30S ribosomal protein S18 [Vibrio shilonii AK1]
gi|148865657|gb|EDL66797.1| ribosomal protein S18 [Vibrio harveyi HY01]
gi|149745013|gb|EDM56315.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ3810]
gi|156523995|gb|ABU69081.1| hypothetical protein VIBHAR_00021 [Vibrio harveyi ATCC BAA-1116]
gi|159173103|gb|EDP57935.1| 30S ribosomal protein S18 [Vibrio sp. AND4]
gi|218321353|emb|CAV17303.1| Ribosomal protein S18 [Vibrio splendidus LGP32]
gi|260608816|gb|EEX34981.1| SSU ribosomal protein S18p [Vibrio coralliilyticus ATCC BAA-450]
gi|260612817|gb|EEX38020.1| SSU ribosomal protein S18p [Vibrio metschnikovii CIP 69.14]
gi|260617868|gb|EEX43043.1| SSU ribosomal protein S18p [Vibrio furnissii CIP 102972]
gi|260937428|gb|EEX93417.1| SSU ribosomal protein S18p [Vibrio orientalis CIP 102891]
gi|262336701|gb|ACY50496.1| SSU ribosomal protein S18p [Vibrio sp. Ex25]
gi|269830778|gb|EEZ84996.1| 30S ribosomal protein S18 [Vibrio alginolyticus 40B]
gi|269830944|gb|EEZ85155.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|269833851|gb|EEZ87946.1| 30S ribosomal protein S18 [Vibrio harveyi 1DA3]
gi|308086286|gb|EFO35981.1| ribosomal protein S18 [Vibrio parahaemolyticus Peru-466]
gi|308089682|gb|EFO39377.1| ribosomal protein S18 [Vibrio parahaemolyticus AN-5034]
gi|308109417|gb|EFO46957.1| ribosomal protein S18 [Vibrio parahaemolyticus AQ4037]
gi|308112694|gb|EFO50234.1| ribosomal protein S18 [Vibrio parahaemolyticus K5030]
gi|309370372|gb|EFP97867.1| 30S ribosomal protein S18 [Vibrio caribbenthicus ATCC BAA-2122]
gi|315181337|gb|ADT88251.1| 30S ribosomal protein S18 [Vibrio furnissii NCTC 11218]
gi|319930489|gb|ADV85353.1| SSU ribosomal protein S18p [Vibrio vulnificus MO6-24/O]
gi|323312727|gb|EGA65856.1| 30S ribosomal protein S18 [Vibrio brasiliensis LMG 20546]
gi|323318798|gb|EGA71749.1| 30S ribosomal protein S18 [Vibrio sinaloensis DSM 21326]
gi|328472355|gb|EGF43225.1| 30S ribosomal protein S18 [Vibrio parahaemolyticus 10329]
Length = 75
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRSRYLALLPYTD 72
>gi|222530063|ref|YP_002573945.1| 30S ribosomal protein S18 [Caldicellulosiruptor bescii DSM 6725]
gi|222456910|gb|ACM61172.1| ribosomal protein S18 [Caldicellulosiruptor bescii DSM 6725]
Length = 92
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|95930451|ref|ZP_01313187.1| ribosomal protein S18 [Desulfuromonas acetoxidans DSM 684]
gi|95133491|gb|EAT15154.1| ribosomal protein S18 [Desulfuromonas acetoxidans DSM 684]
Length = 85
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R RRK C + +IDYK++R L F+S+RGKIVP RIS QR++ +AIKR
Sbjct: 10 RRRFGRRKGCRFCADSSLKIDYKEVRTLRYFISERGKIVPRRISGNCATHQRKVTEAIKR 69
Query: 72 ARYLGLIAYVN 82
AR + L+++ +
Sbjct: 70 ARNIALLSFTS 80
>gi|56461038|ref|YP_156319.1| ribosomal protein S18 [Idiomarina loihiensis L2TR]
gi|81678373|sp|Q5QY03|RS18_IDILO RecName: Full=30S ribosomal protein S18
gi|56180048|gb|AAV82770.1| Ribosomal protein S18 [Idiomarina loihiensis L2TR]
Length = 75
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 15 ADGVKEIDYKDIATLKNYITETGKIVPSRITGTSAKYQRQLARAIKRARYLSLLPYTD 72
>gi|15600127|ref|NP_253621.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PAO1]
gi|107104033|ref|ZP_01367951.1| hypothetical protein PaerPA_01005106 [Pseudomonas aeruginosa
PACS2]
gi|116053083|ref|YP_793402.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152988792|ref|YP_001350982.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PA7]
gi|218894029|ref|YP_002442898.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa LESB58]
gi|254238351|ref|ZP_04931674.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa C3719]
gi|254244175|ref|ZP_04937497.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 2192]
gi|296391774|ref|ZP_06881249.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa PAb1]
gi|313109936|ref|ZP_07795864.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 39016]
gi|20978739|sp|Q9HUN0|RS18_PSEAE RecName: Full=30S ribosomal protein S18
gi|122256904|sp|Q02F84|RS18_PSEAB RecName: Full=30S ribosomal protein S18
gi|166220975|sp|A6VD47|RS18_PSEA7 RecName: Full=30S ribosomal protein S18
gi|226735123|sp|B7V1Z7|RS18_PSEA8 RecName: Full=30S ribosomal protein S18
gi|9951213|gb|AAG08319.1|AE004906_7 30S ribosomal protein S18 [Pseudomonas aeruginosa PAO1]
gi|115588304|gb|ABJ14319.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170282|gb|EAZ55793.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa C3719]
gi|126197553|gb|EAZ61616.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 2192]
gi|150963950|gb|ABR85975.1| ribosomal protein S18 [Pseudomonas aeruginosa PA7]
gi|218774257|emb|CAW30074.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa LESB58]
gi|310882366|gb|EFQ40960.1| 30S ribosomal protein S18 [Pseudomonas aeruginosa 39016]
Length = 76
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLKAYVSETGKIVPSRITGTKAKYQRQLATAIKRARYLALLPYTD 72
>gi|227500388|ref|ZP_03930450.1| possible ribosomal protein S18 [Anaerococcus tetradius ATCC
35098]
gi|227217451|gb|EEI82770.1| possible ribosomal protein S18 [Anaerococcus tetradius ATCC
35098]
Length = 76
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKR
Sbjct: 5 RRFRPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAIKR 64
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 65 ARQVALLPY 73
>gi|154253799|ref|YP_001414623.1| 30S ribosomal protein S18 [Parvibaculum lavamentivorans DS-1]
gi|205616358|sp|A7HYI3|RS18_PARL1 RecName: Full=30S ribosomal protein S18
gi|154157749|gb|ABS64966.1| ribosomal protein S18 [Parvibaculum lavamentivorans DS-1]
Length = 81
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+L LI
Sbjct: 17 KTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFLALI 76
Query: 79 AYV 81
YV
Sbjct: 77 PYV 79
>gi|22299604|ref|NP_682851.1| 30S ribosomal protein S18 [Thermosynechococcus elongatus BP-1]
gi|59798900|sp|Q8DH98|RS18_THEEB RecName: Full=30S ribosomal protein S18
gi|22295788|dbj|BAC09613.1| 30S ribosomal protein S18 [Thermosynechococcus elongatus BP-1]
Length = 71
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL RF+++RGKI+P R++ ++ K+QR+LA AIKRAR
Sbjct: 3 FYRRRISPI--PPGQPIDYKDVDLLRRFITERGKILPRRVTGLTAKQQRQLAVAIKRARI 60
Query: 75 LGLIAYVNL 83
+ L+ ++NL
Sbjct: 61 MALLPFLNL 69
>gi|294084212|ref|YP_003550970.1| 30S ribosomal protein S18 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663785|gb|ADE38886.1| ribosomal protein S18 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 84
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
LR+ + RRKSCP SG AP+IDYKD +LL R+ S+RGKI+PSRIS+VS KKQRELA AI
Sbjct: 11 LRKPFNRRRKSCPFSGANAPKIDYKDTKLLARYTSERGKIIPSRISAVSAKKQRELATAI 70
Query: 70 KRARYLGLIAYV 81
KR+R+L L+ YV
Sbjct: 71 KRSRFLALMPYV 82
>gi|146296359|ref|YP_001180130.1| 30S ribosomal protein S18 [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|205557109|sp|A4XJ54|RS18_CALS8 RecName: Full=30S ribosomal protein S18
gi|145409935|gb|ABP66939.1| SSU ribosomal protein S18P [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 91
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 23 KKKKRVCSFCVERIYDIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 82
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 83 LALLPFI 89
>gi|85713276|ref|ZP_01044299.1| Ribosomal protein S18 [Idiomarina baltica OS145]
gi|85692894|gb|EAQ30869.1| Ribosomal protein S18 [Idiomarina baltica OS145]
Length = 75
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+G IDYKDI L ++++ GKIVPSRI+ S K QR+LA+AIKRARYL L+ Y +
Sbjct: 15 AEGVKEIDYKDIATLKNYITESGKIVPSRITGTSAKYQRQLARAIKRARYLSLLPYTD 72
>gi|326796491|ref|YP_004314311.1| 30S ribosomal protein S18 [Marinomonas mediterranea MMB-1]
gi|326547255|gb|ADZ92475.1| 30S ribosomal protein S18 [Marinomonas mediterranea MMB-1]
Length = 76
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYIALLPYTD 72
>gi|94501371|ref|ZP_01307891.1| ribosomal protein S18 [Oceanobacter sp. RED65]
gi|94426484|gb|EAT11472.1| ribosomal protein S18 [Oceanobacter sp. RED65]
Length = 75
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ K QR+L+ AIKRARY+ L+ Y +
Sbjct: 14 TAEGVDQIDYKDLDTLKGYITETGKIVPSRITGTKAKYQRQLSSAIKRARYVALLPYTD 72
>gi|118587178|ref|ZP_01544606.1| ribosomal protein S18 [Oenococcus oeni ATCC BAA-1163]
gi|118432320|gb|EAV39058.1| ribosomal protein S18 [Oenococcus oeni ATCC BAA-1163]
Length = 106
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
L+ +DYKD LL RF++ GKI+P RI+ S K QR++A AIKRAR + L+
Sbjct: 42 VDYLAVNHIDYVDYKDTELLQRFIADNGKILPRRITGTSSKNQRKIATAIKRARIMALLP 101
Query: 80 YV 81
+V
Sbjct: 102 FV 103
>gi|160900659|ref|YP_001566241.1| 30S ribosomal protein S18 [Delftia acidovorans SPH-1]
gi|229559982|sp|A9BNG1|RS18_DELAS RecName: Full=30S ribosomal protein S18
gi|160366243|gb|ABX37856.1| ribosomal protein S18 [Delftia acidovorans SPH-1]
Length = 93
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+ + GKIVP+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIGENGKIVPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L L+ Y +
Sbjct: 70 RQLNTAIKRARFLALVPYSD 89
>gi|126665193|ref|ZP_01736176.1| ribosomal protein S18 [Marinobacter sp. ELB17]
gi|126630563|gb|EBA01178.1| ribosomal protein S18 [Marinobacter sp. ELB17]
Length = 76
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYVTETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYSD 72
>gi|169832351|ref|YP_001718333.1| 30S ribosomal protein S18 [Candidatus Desulforudis audaxviator
MP104C]
gi|205557228|sp|B1I6S9|RS18_DESAP RecName: Full=30S ribosomal protein S18
gi|169639195|gb|ACA60701.1| ribosomal protein S18 [Candidatus Desulforudis audaxviator
MP104C]
Length = 75
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD L +++++RGKI+P RI+ QR L +IKR+R++ L+
Sbjct: 12 ICSFCVDKIAVIDYKDTPRLKKYITERGKILPRRITGNCAHHQRMLTVSIKRSRHMALLP 71
Query: 80 YVN 82
+
Sbjct: 72 FST 74
>gi|296127398|ref|YP_003634650.1| ribosomal protein S18 [Brachyspira murdochii DSM 12563]
gi|296019214|gb|ADG72451.1| ribosomal protein S18 [Brachyspira murdochii DSM 12563]
Length = 112
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C +DYKDI+LL R++ GKI+P R++ K QR + KAIKR
Sbjct: 40 RKKFFKKKVCYFCKNNIDVLDYKDIKLLKRYVKDSGKIIPKRLNGTCSKHQRLVTKAIKR 99
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 100 ARNIALLPY 108
>gi|225619963|ref|YP_002721220.1| 30S ribosomal protein S18 [Brachyspira hyodysenteriae WA1]
gi|254765412|sp|C0R078|RS18_BRAHW RecName: Full=30S ribosomal protein S18
gi|225214782|gb|ACN83516.1| 30S ribosomal protein S18 [Brachyspira hyodysenteriae WA1]
Length = 111
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R ++K C +DYKDI+LL R++ GKI+P R++ K QR + KAIKR
Sbjct: 39 RKKFFKKKVCYFCKNNIDVLDYKDIKLLKRYVKDSGKIIPKRLNGTCSKHQRLVTKAIKR 98
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 99 ARNIALLPY 107
>gi|302543993|ref|ZP_07296335.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|307329989|ref|ZP_07609141.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|302461611|gb|EFL24704.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
gi|306884365|gb|EFN15399.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 78
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+
Sbjct: 13 VCVFCKEKISYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTS 75
>gi|257065997|ref|YP_003152253.1| 30S ribosomal protein S18 [Anaerococcus prevotii DSM 20548]
gi|256797877|gb|ACV28532.1| ribosomal protein S18 [Anaerococcus prevotii DSM 20548]
Length = 75
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+K P + IDYKDI L RF++ RGKI+P R++ ++ K QRE+ +AIKR
Sbjct: 4 RRFRPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAIKR 63
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 64 ARQVALLPY 72
>gi|326790180|ref|YP_004308001.1| ribosomal protein S18 [Clostridium lentocellum DSM 5427]
gi|326540944|gb|ADZ82803.1| ribosomal protein S18 [Clostridium lentocellum DSM 5427]
Length = 77
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ +R+ RRK +G +I+YKDI L +F+S+RGKI+P RI+ S K QR+L A
Sbjct: 3 MQKRHNRRRRKINQFAGDNIKKINYKDINTLKKFISERGKILPRRITGNSAKAQRKLTVA 62
Query: 69 IKRARYLGLIAYV 81
IKRAR++ L+ Y
Sbjct: 63 IKRARHIALLPYT 75
>gi|317057125|ref|YP_004105592.1| 30S ribosomal protein S18 [Ruminococcus albus 7]
gi|315449394|gb|ADU22958.1| ribosomal protein S18 [Ruminococcus albus 7]
Length = 81
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 12 RNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R V R+K C A +IDYKDI L + +++R KI+P R++ QREL KAIK
Sbjct: 9 RPVKRGRKKVCMFCVDRAEKIDYKDIAKLRKCMTERAKILPRRVTGTCAYHQRELTKAIK 68
Query: 71 RARYLGLIAYV 81
RAR++ L+ YV
Sbjct: 69 RARHVALLPYV 79
>gi|323136068|ref|ZP_08071151.1| ribosomal protein S18 [Methylocystis sp. ATCC 49242]
gi|322399159|gb|EFY01678.1| ribosomal protein S18 [Methylocystis sp. ATCC 49242]
Length = 78
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 14 KSCPFSGANAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|15618861|ref|NP_225147.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae CWL029]
gi|15836485|ref|NP_301009.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae J138]
gi|16752078|ref|NP_445444.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae AR39]
gi|33242320|ref|NP_877261.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae TW-183]
gi|6707742|sp|Q9Z6V4|RS18_CHLPN RecName: Full=30S ribosomal protein S18
gi|4377277|gb|AAD19090.1| S18 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189819|gb|AAF38692.1| ribosomal protein S18 [Chlamydophila pneumoniae AR39]
gi|8979326|dbj|BAA99160.1| S18 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236831|gb|AAP98918.1| 30S ribosomal protein S18 [Chlamydophila pneumoniae TW-183]
gi|269302744|gb|ACZ32844.1| ribosomal protein S18 [Chlamydophila pneumoniae LPCoLN]
Length = 82
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 7 TPLLRRNVSHRR--KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+ +R K CP G IDYKD+ L +F+++RGK++P RI+ VS + Q
Sbjct: 3 KPVHNNEHRRKRFNKKCPFVSAGWKTIDYKDVETLKKFITERGKVLPRRITGVSSRFQGV 62
Query: 65 LAKAIKRARYLGLIAYVN 82
L++AIKRAR+LGL+ +V
Sbjct: 63 LSQAIKRARHLGLLPFVG 80
>gi|254294300|ref|YP_003060323.1| ribosomal protein S18 [Hirschia baltica ATCC 49814]
gi|254042831|gb|ACT59626.1| ribosomal protein S18 [Hirschia baltica ATCC 49814]
Length = 86
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK CP SG AP +DYKD++LL R++S++GKIVP+RI++VS KKQR L++AIK
Sbjct: 14 RRPFGRRRKVCPFSGDAAPALDYKDVKLLQRYISEKGKIVPARITAVSQKKQRRLSQAIK 73
Query: 71 RARYLGLIAY 80
RAR+L L+ Y
Sbjct: 74 RARHLALLPY 83
>gi|299133697|ref|ZP_07026891.1| ribosomal protein S18 [Afipia sp. 1NLS2]
gi|298591533|gb|EFI51734.1| ribosomal protein S18 [Afipia sp. 1NLS2]
Length = 79
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK+CP +G AP+ID+KD +LL R++S+RGKIVPSRI++VS KQRELA+AIK
Sbjct: 7 RRPFFRRRKTCPFTGPNAPKIDFKDSKLLMRYVSERGKIVPSRITAVSALKQRELARAIK 66
Query: 71 RARYLGLIAYV 81
RAR+LGL+ YV
Sbjct: 67 RARFLGLLPYV 77
>gi|88704449|ref|ZP_01102163.1| 30S ribosomal protein S18 [Congregibacter litoralis KT71]
gi|88701500|gb|EAQ98605.1| 30S ribosomal protein S18 [Congregibacter litoralis KT71]
Length = 75
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ A+KRAR+L L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKAYISETGKIVPSRITGTKAKYQRQLSTAVKRARFLALLPYTD 72
>gi|297563757|ref|YP_003682731.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848205|gb|ADH70225.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 78
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + IDYKD LL +F+S+RGKI R++ + QR++A AIK AR + L+
Sbjct: 13 VCLFCQEKQSYIDYKDTTLLRKFISERGKIRARRVTGNCTQHQRDVATAIKNAREVALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTS 75
>gi|317486567|ref|ZP_07945388.1| ribosomal protein S18 [Bilophila wadsworthia 3_1_6]
gi|316922167|gb|EFV43432.1| ribosomal protein S18 [Bilophila wadsworthia 3_1_6]
Length = 87
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +L ++++RGKI+ RI+ K QR L+ I
Sbjct: 3 FKKKFAPRRKFCRFCADADLPLDYKRPDILRDYITERGKIIARRITGTCAKHQRLLSTEI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLFYT 74
>gi|163853340|ref|YP_001641383.1| ribosomal protein S18 [Methylobacterium extorquens PA1]
gi|188583606|ref|YP_001927051.1| 30S ribosomal protein S18 [Methylobacterium populi BJ001]
gi|218532197|ref|YP_002423013.1| 30S ribosomal protein S18 [Methylobacterium chloromethanicum CM4]
gi|240140756|ref|YP_002965236.1| 30S ribosomal protein S18 [Methylobacterium extorquens AM1]
gi|254563266|ref|YP_003070361.1| 30S ribosomal protein S18 [Methylobacterium extorquens DM4]
gi|205558286|sp|A9W8G3|RS18_METEP RecName: Full=30S ribosomal protein S18
gi|205558291|sp|B1ZFQ7|RS18_METPB RecName: Full=30S ribosomal protein S18
gi|254812946|sp|B7L2P1|RS18_METC4 RecName: Full=30S ribosomal protein S18
gi|163664945|gb|ABY32312.1| ribosomal protein S18 [Methylobacterium extorquens PA1]
gi|179347104|gb|ACB82516.1| ribosomal protein S18 [Methylobacterium populi BJ001]
gi|218524500|gb|ACK85085.1| ribosomal protein S18 [Methylobacterium chloromethanicum CM4]
gi|240010733|gb|ACS41959.1| 30S ribosomal protein S18 [Methylobacterium extorquens AM1]
gi|254270544|emb|CAX26547.1| 30S ribosomal protein S18 [Methylobacterium extorquens DM4]
Length = 84
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 59/63 (93%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG+ AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKR+R+LGL+
Sbjct: 20 KSCPFSGENAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRSRFLGLL 79
Query: 79 AYV 81
YV
Sbjct: 80 PYV 82
>gi|312792728|ref|YP_004025651.1| 30S ribosomal protein S18 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877716|ref|ZP_07737670.1| ribosomal protein S18 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795517|gb|EFR11892.1| ribosomal protein S18 [Caldicellulosiruptor lactoaceticus 6A]
gi|312179868|gb|ADQ40038.1| ribosomal protein S18 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 92
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ C + IDYKD+ L +FL++RGKI+P R + + QR+L +AIKRAR
Sbjct: 24 KKKKRVCSFCVERIYEIDYKDVNRLKKFLTERGKIMPRRTTGNCARHQRQLTRAIKRARI 83
Query: 75 LGLIAYV 81
L L+ ++
Sbjct: 84 LALLPFI 90
>gi|296444436|ref|ZP_06886401.1| ribosomal protein S18 [Methylosinus trichosporium OB3b]
gi|296258083|gb|EFH05145.1| ribosomal protein S18 [Methylosinus trichosporium OB3b]
Length = 78
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
KSCP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 14 KSCPFSGANAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|149377616|ref|ZP_01895354.1| ribosomal protein S18 [Marinobacter algicola DG893]
gi|149358089|gb|EDM46573.1| ribosomal protein S18 [Marinobacter algicola DG893]
gi|311693517|gb|ADP96390.1| ribosomal protein S18 [marine bacterium HP15]
Length = 76
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYSD 72
>gi|153002998|ref|YP_001377323.1| 30S ribosomal protein S18 [Anaeromyxobacter sp. Fw109-5]
gi|205556807|sp|A7H6J3|RS18_ANADF RecName: Full=30S ribosomal protein S18
gi|152026571|gb|ABS24339.1| ribosomal protein S18 [Anaeromyxobacter sp. Fw109-5]
Length = 143
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C ++DYKD + FL++RGKI+P RIS K QRE+A A+KR R L ++
Sbjct: 77 KVCRFCADKTLKVDYKDQSQMKYFLTERGKIIPRRISGNCAKHQREVATAVKRGRMLAIL 136
Query: 79 AYV 81
Y
Sbjct: 137 PYT 139
>gi|284036033|ref|YP_003385963.1| ribosomal protein S18 [Spirosoma linguale DSM 74]
gi|283815326|gb|ADB37164.1| ribosomal protein S18 [Spirosoma linguale DSM 74]
Length = 83
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+R+K G IDYKD L + L+++GKI+P R++ S K QR++A+A+KRA
Sbjct: 10 KTENRKKYDRFKKAGIKYIDYKDGNFLLKLLNEQGKILPRRLTGTSLKNQRKVAQAVKRA 69
Query: 73 RYLGLIAYVN 82
R+L ++ YV
Sbjct: 70 RHLAILPYVG 79
>gi|167750475|ref|ZP_02422602.1| hypothetical protein EUBSIR_01451 [Eubacterium siraeum DSM 15702]
gi|167656626|gb|EDS00756.1| hypothetical protein EUBSIR_01451 [Eubacterium siraeum DSM 15702]
gi|291530826|emb|CBK96411.1| SSU ribosomal protein S18P [Eubacterium siraeum 70/3]
gi|291557667|emb|CBL34784.1| SSU ribosomal protein S18P [Eubacterium siraeum V10Sc8a]
Length = 99
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E +R R+K C A IDYKD+ L + +++R KI+P R++ Q
Sbjct: 19 EKNEKSTVRPMKRTRKKVCAFCADRAEFIDYKDVAKLRKCMTERYKILPRRVTGCCAYHQ 78
Query: 63 RELAKAIKRARYLGLIAYVN 82
REL AIK+AR + LI YV+
Sbjct: 79 RELTTAIKKARQVALIPYVS 98
>gi|323703280|ref|ZP_08114931.1| ribosomal protein S18 [Desulfotomaculum nigrificans DSM 574]
gi|323531745|gb|EGB21633.1| ribosomal protein S18 [Desulfotomaculum nigrificans DSM 574]
Length = 76
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD+ L +++++RGKI+P RIS QR L AIKRAR + L+
Sbjct: 13 ICSFCVDKMTSIDYKDVPRLKKYITERGKILPRRISGNCAHHQRMLTTAIKRARNICLLP 72
Query: 80 YV 81
+
Sbjct: 73 FT 74
>gi|29840574|ref|NP_829680.1| 30S ribosomal protein S18 [Chlamydophila caviae GPIC]
gi|33301610|sp|Q821W8|RS18_CHLCV RecName: Full=30S ribosomal protein S18
gi|29834924|gb|AAP05558.1| ribosomal protein S18 [Chlamydophila caviae GPIC]
Length = 82
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 7 TPLLRRNVSHRR--KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+ +R K CP G IDYKD L +F+++RGKI+P RI+ VS + Q
Sbjct: 3 KPVHNNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITERGKILPRRITGVSSRFQGT 62
Query: 65 LAKAIKRARYLGLIAYV 81
L AIKRAR++GL+ +V
Sbjct: 63 LTLAIKRARHIGLLPFV 79
>gi|39938497|ref|NP_950263.1| 30S ribosomal protein S18 [Onion yellows phytoplasma OY-M]
gi|59798755|sp|Q6YRK3|RS18_ONYPE RecName: Full=30S ribosomal protein S18
gi|39721606|dbj|BAD04096.1| ribosomal protein S18 [Onion yellows phytoplasma OY-M]
Length = 79
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ RRK C + +ID+KDI LL RF++ RG+I+ R+++ S K QR+LA AIK
Sbjct: 7 KNTFKKRRKVCFFTENKVTKIDFKDIELLQRFITDRGRILSRRVTNTSAKWQRQLAIAIK 66
Query: 71 RARYLGLIAYV 81
RAR++ LI ++
Sbjct: 67 RARHMALIPFI 77
>gi|315640348|ref|ZP_07895464.1| 30S ribosomal protein S18 [Enterococcus italicus DSM 15952]
gi|315483884|gb|EFU74364.1| 30S ribosomal protein S18 [Enterococcus italicus DSM 15952]
Length = 78
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
L+ +DYKDI LL RF+S+RGKI+P R++ K QR+L AIKRAR +GL+
Sbjct: 14 VDYLAANHIEHVDYKDIELLKRFISERGKILPRRVTGTGAKNQRKLTIAIKRARIMGLLP 73
Query: 80 YVN 82
+
Sbjct: 74 FAT 76
>gi|195941851|ref|ZP_03087233.1| 30S ribosomal protein S18 [Borrelia burgdorferi 80a]
gi|223889129|ref|ZP_03623718.1| ribosomal protein S18 [Borrelia burgdorferi 64b]
gi|223885378|gb|EEF56479.1| ribosomal protein S18 [Borrelia burgdorferi 64b]
Length = 96
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCRFC-DSGKHPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|32491010|ref|NP_871264.1| hypothetical protein WGLp261 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340412|sp|Q8D2U3|RS18_WIGBR RecName: Full=30S ribosomal protein S18
gi|25166216|dbj|BAC24407.1| rpsR [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 75
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RRK C + + IDYKDI LL ++++ GKIVPSRI+ + QR+L++A+KRARY
Sbjct: 5 FRRRKFCRFTLEKINNIDYKDIILLKNYITENGKIVPSRITGTRARYQRQLSRAVKRARY 64
Query: 75 LGLIAYVN 82
L L+ Y +
Sbjct: 65 LSLLPYTD 72
>gi|284047347|ref|YP_003397687.1| ribosomal protein S18 [Conexibacter woesei DSM 14684]
gi|283951568|gb|ADB54312.1| ribosomal protein S18 [Conexibacter woesei DSM 14684]
Length = 108
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RRK CP + ++D+KDI L +F+S+RGKI RI+ + Q ++++A+KRAR
Sbjct: 20 SSRRKPCPYCKEKVDQVDWKDIGSLRKFVSERGKIRSRRITGACRRHQNQVSRAVKRARE 79
Query: 75 LGLIAYV 81
L L+ YV
Sbjct: 80 LALLPYV 86
>gi|218886447|ref|YP_002435768.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735112|sp|B8DRL3|RS18_DESVM RecName: Full=30S ribosomal protein S18
gi|218757401|gb|ACL08300.1| ribosomal protein S18 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 87
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFTPRRKFCRFCADKDLPLDYKRADILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLFYT 74
>gi|120609917|ref|YP_969595.1| 30S ribosomal protein S18 [Acidovorax citrulli AAC00-1]
gi|319763794|ref|YP_004127731.1| ribosomal protein s18 [Alicycliphilus denitrificans BC]
gi|326316064|ref|YP_004233736.1| 30S ribosomal protein S18 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|330823942|ref|YP_004387245.1| 30S ribosomal protein S18 [Alicycliphilus denitrificans K601]
gi|166220916|sp|A1TLI3|RS18_ACIAC RecName: Full=30S ribosomal protein S18
gi|120588381|gb|ABM31821.1| SSU ribosomal protein S18P [Acidovorax citrulli AAC00-1]
gi|317118355|gb|ADV00844.1| ribosomal protein S18 [Alicycliphilus denitrificans BC]
gi|323372900|gb|ADX45169.1| 30S ribosomal protein S18 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|329309314|gb|AEB83729.1| 30S ribosomal protein S18 [Alicycliphilus denitrificans K601]
Length = 93
Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L L+ Y +
Sbjct: 70 RQLNTAIKRARFLALVPYSD 89
>gi|188997592|ref|YP_001931843.1| ribosomal protein S18 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932659|gb|ACD67289.1| ribosomal protein S18 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 79
Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A + R+K C + +YKDI L F+S+RGKI PSRIS K QR
Sbjct: 1 MANVTQNKPYFQKRKKYCKFCAEKKEP-NYKDIETLKEFISERGKITPSRISGTCAKHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
+L+ IK+AR L LI YV
Sbjct: 60 KLSVEIKKARQLALIPYV 77
>gi|87119507|ref|ZP_01075404.1| 30S ribosomal protein S18 [Marinomonas sp. MED121]
gi|86164983|gb|EAQ66251.1| 30S ribosomal protein S18 [Marinomonas sp. MED121]
Length = 76
Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ L+ Y +
Sbjct: 14 TAEGTVEIDYKDLDTLKGYVTETGKIVPSRITGTKARYQRQLATAIKRARYIALLPYTD 72
>gi|46579370|ref|YP_010178.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603072|ref|YP_967472.1| 30S ribosomal protein S18 [Desulfovibrio vulgaris DP4]
gi|59798765|sp|Q72DH2|RS18_DESVH RecName: Full=30S ribosomal protein S18
gi|166220950|sp|A1VF29|RS18_DESVV RecName: Full=30S ribosomal protein S18
gi|46448784|gb|AAS95437.1| ribosomal protein S18 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563301|gb|ABM29045.1| SSU ribosomal protein S18P [Desulfovibrio vulgaris DP4]
gi|311233195|gb|ADP86049.1| ribosomal protein S18 [Desulfovibrio vulgaris RCH1]
Length = 87
Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C IDYK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKELPIDYKRADILRDFITERGKIIARRITGTCAHHQRVLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|83319872|ref|YP_424024.1| 30S ribosomal protein S18 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|123726538|sp|Q2ST89|RS18_MYCCT RecName: Full=30S ribosomal protein S18
gi|83283758|gb|ABC01690.1| 30S ribosomal protein S18 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 75
Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+
Sbjct: 12 VNFFQKNNIKYIDYKDVELLKKFISPNGQILPRRITGTSLKDQRQLALAIKRARQMALLP 71
Query: 80 YV 81
YV
Sbjct: 72 YV 73
>gi|108803692|ref|YP_643629.1| 30S ribosomal protein S18P [Rubrobacter xylanophilus DSM 9941]
gi|122976088|sp|Q1AXR1|RS18_RUBXD RecName: Full=30S ribosomal protein S18
gi|108764935|gb|ABG03817.1| SSU ribosomal protein S18P [Rubrobacter xylanophilus DSM 9941]
Length = 81
Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A S ++K C + +DYKD +L RF S+RGKI R++ + + QR
Sbjct: 1 MAKKKGGATTRSGKKKVCVFCKENIEYVDYKDYNMLRRFTSERGKIRARRVTGLCPQHQR 60
Query: 64 ELAKAIKRARYLGLIAYV 81
E A+AIKRAR + L+ Y+
Sbjct: 61 ETARAIKRAREMALLPYI 78
>gi|150010521|ref|YP_001305264.1| 30S ribosomal protein S18 [Parabacteroides distasonis ATCC 8503]
gi|154491708|ref|ZP_02031334.1| hypothetical protein PARMER_01319 [Parabacteroides merdae ATCC
43184]
gi|255016568|ref|ZP_05288694.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_7]
gi|256842194|ref|ZP_05547698.1| ribosomal protein S18 [Parabacteroides sp. D13]
gi|262384879|ref|ZP_06078011.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_33B]
gi|298377641|ref|ZP_06987592.1| ribosomal protein S18 [Bacteroides sp. 3_1_19]
gi|301308939|ref|ZP_07214884.1| ribosomal protein S18 [Bacteroides sp. 20_3]
gi|205616305|sp|A6LIX8|RS18_PARD8 RecName: Full=30S ribosomal protein S18
gi|149938945|gb|ABR45642.1| 30S ribosomal protein S18 [Parabacteroides distasonis ATCC 8503]
gi|154087949|gb|EDN86994.1| hypothetical protein PARMER_01319 [Parabacteroides merdae ATCC
43184]
gi|256736078|gb|EEU49408.1| ribosomal protein S18 [Parabacteroides sp. D13]
gi|262293595|gb|EEY81531.1| 30S ribosomal protein S18 [Bacteroides sp. 2_1_33B]
gi|298265344|gb|EFI07006.1| ribosomal protein S18 [Bacteroides sp. 3_1_19]
gi|300832965|gb|EFK63590.1| ribosomal protein S18 [Bacteroides sp. 20_3]
Length = 89
Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 29 NGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 85
>gi|169824836|ref|YP_001692447.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 29328]
gi|297587219|ref|ZP_06945864.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 53516]
gi|302379548|ref|ZP_07268033.1| ribosomal protein S18 [Finegoldia magna ACS-171-V-Col3]
gi|303234545|ref|ZP_07321182.1| ribosomal protein S18 [Finegoldia magna BVS033A4]
gi|167831641|dbj|BAG08557.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 29328]
gi|297575200|gb|EFH93919.1| 30S ribosomal protein S18 [Finegoldia magna ATCC 53516]
gi|302312455|gb|EFK94451.1| ribosomal protein S18 [Finegoldia magna ACS-171-V-Col3]
gi|302494379|gb|EFL54148.1| ribosomal protein S18 [Finegoldia magna BVS033A4]
Length = 74
Score = 106 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K P IDYKD+ +L ++S+RGKI+P R++ ++ K QR++ AI
Sbjct: 1 MQRRFRPRKKIDPFQKDKTKVIDYKDVNMLKNYISERGKILPRRVTGLNAKHQRQITDAI 60
Query: 70 KRARYLGLIAY 80
K+AR + L+ Y
Sbjct: 61 KKARQVALLPY 71
>gi|219684867|ref|ZP_03539809.1| ribosomal protein S18 [Borrelia garinii PBr]
gi|219685376|ref|ZP_03540195.1| ribosomal protein S18 [Borrelia garinii Far04]
gi|224532127|ref|ZP_03672759.1| ribosomal protein S18 [Borrelia valaisiana VS116]
gi|219671812|gb|EED28867.1| ribosomal protein S18 [Borrelia garinii PBr]
gi|219673149|gb|EED30169.1| ribosomal protein S18 [Borrelia garinii Far04]
gi|224511592|gb|EEF81998.1| ribosomal protein S18 [Borrelia valaisiana VS116]
Length = 96
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|313672482|ref|YP_004050593.1| SSU ribosomal protein s18p [Calditerrivibrio nitroreducens DSM
19672]
gi|312939238|gb|ADR18430.1| SSU ribosomal protein S18P [Calditerrivibrio nitroreducens DSM
19672]
Length = 76
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L R ++KSC IDYKD LL +F+++RGKI+P R++ K QR LA A
Sbjct: 2 LNARKKFQKKKSCRFCTDKIE-IDYKDSVLLRQFVTERGKILPRRLTGTCTKHQRRLATA 60
Query: 69 IKRARYLGLIAY 80
IK AR + L+ +
Sbjct: 61 IKTARIIALLPF 72
>gi|242279494|ref|YP_002991623.1| 30S ribosomal protein S18 [Desulfovibrio salexigens DSM 2638]
gi|259494806|sp|C6BVA9|RS18_DESAD RecName: Full=30S ribosomal protein S18
gi|242122388|gb|ACS80084.1| ribosomal protein S18 [Desulfovibrio salexigens DSM 2638]
Length = 86
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+R + +RK C +DYK +L F+++RGKI+ RI+ K QR L I
Sbjct: 3 FKRKFTPKRKFCRFCADKNLPLDYKRPDILKDFVTERGKIIARRITGTCAKHQRRLTTEI 62
Query: 70 KRARYLGLIAYVNL 83
KR+R + L+ Y +
Sbjct: 63 KRSRQMALMHYTTV 76
>gi|332830347|gb|EGK02975.1| 30S ribosomal protein S18 [Dysgonomonas gadei ATCC BAA-286]
gi|332883573|gb|EGK03856.1| 30S ribosomal protein S18 [Dysgonomonas mossii DSM 22836]
Length = 88
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 28 NGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 84
>gi|312141932|ref|YP_004009268.1| 30S ribosomal protein s18 rpsr [Rhodococcus equi 103S]
gi|325672814|ref|ZP_08152508.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
gi|311891271|emb|CBH50592.1| 30S ribosomal protein S18 RpsR [Rhodococcus equi 103S]
gi|325556067|gb|EGD25735.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
Length = 80
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +IDYKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKVM-KKKVCTFCKEKNTQIDYKDTALLRKYVSDRGKIRARRVTGNCVQHQRDI 60
Query: 66 AKAIKRARYLGLIAYVN 82
A A+K +R + L+ YV+
Sbjct: 61 AVAVKNSREVALLPYVS 77
>gi|239814826|ref|YP_002943736.1| 30S ribosomal protein S18 [Variovorax paradoxus S110]
gi|319792759|ref|YP_004154399.1| ribosomal protein s18 [Variovorax paradoxus EPS]
gi|259494822|sp|C5CUP2|RS18_VARPS RecName: Full=30S ribosomal protein S18
gi|239801403|gb|ACS18470.1| ribosomal protein S18 [Variovorax paradoxus S110]
gi|315595222|gb|ADU36288.1| ribosomal protein S18 [Variovorax paradoxus EPS]
Length = 93
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+S+ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDIDTLRDFISENGKIIPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L ++ Y +
Sbjct: 70 RQLNTAIKRARFLAMVPYSD 89
>gi|221068653|ref|ZP_03544758.1| ribosomal protein S18 [Comamonas testosteroni KF-1]
gi|264677151|ref|YP_003277057.1| ribosomal protein S18 [Comamonas testosteroni CNB-2]
gi|299530695|ref|ZP_07044110.1| 30S ribosomal protein S18 [Comamonas testosteroni S44]
gi|220713676|gb|EED69044.1| ribosomal protein S18 [Comamonas testosteroni KF-1]
gi|262207663|gb|ACY31761.1| ribosomal protein S18 [Comamonas testosteroni CNB-2]
gi|298721211|gb|EFI62153.1| 30S ribosomal protein S18 [Comamonas testosteroni S44]
Length = 93
Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKIVP+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIVPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L ++ Y +
Sbjct: 70 RQLNTAIKRARFLAMLPYSD 89
>gi|119718879|ref|YP_925844.1| 30S ribosomal protein S18 [Nocardioides sp. JS614]
gi|166220965|sp|A1SQS2|RS18_NOCSJ RecName: Full=30S ribosomal protein S18
gi|119539540|gb|ABL84157.1| SSU ribosomal protein S18P [Nocardioides sp. JS614]
Length = 78
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C + A +DYKD LL +F+S RGKI R++ + QR++A A+K AR
Sbjct: 7 RKPKKKVCQFCKEKATGVDYKDTALLRKFISDRGKIRARRVTGNCVQHQRDVAIAVKNAR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EVALLPYTS 75
>gi|116490138|ref|YP_809667.1| SSU ribosomal protein S18P [Oenococcus oeni PSU-1]
gi|290889532|ref|ZP_06552622.1| hypothetical protein AWRIB429_0012 [Oenococcus oeni AWRIB429]
gi|122277671|sp|Q04HQ5|RS18_OENOB RecName: Full=30S ribosomal protein S18
gi|116090863|gb|ABJ56017.1| SSU ribosomal protein S18P [Oenococcus oeni PSU-1]
gi|290480730|gb|EFD89364.1| hypothetical protein AWRIB429_0012 [Oenococcus oeni AWRIB429]
Length = 106
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
L+ +DYKD LL RF++ GKI+P RI+ S K QR++A AIKRAR + L+
Sbjct: 42 VDYLAVNHIDYVDYKDTELLQRFIADNGKILPRRITGTSSKNQRKIATAIKRARIMALLP 101
Query: 80 YV 81
+V
Sbjct: 102 FV 103
>gi|224534892|ref|ZP_03675461.1| ribosomal protein S18 [Borrelia spielmanii A14S]
gi|224513832|gb|EEF84157.1| ribosomal protein S18 [Borrelia spielmanii A14S]
Length = 96
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|72163492|ref|YP_291149.1| 30S ribosomal protein S18 [Thermobifida fusca YX]
gi|123733431|sp|Q47K96|RS18_THEFY RecName: Full=30S ribosomal protein S18
gi|71917224|gb|AAZ57126.1| SSU ribosomal protein S18P [Thermobifida fusca YX]
Length = 78
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C + +DYKD LL +F+S RGKI R++ + QR++AKA+K AR + L+ Y
Sbjct: 14 CVFCQEKMTYVDYKDTTLLRKFISDRGKIRARRVTGNCTQHQRDVAKAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|218264329|ref|ZP_03478186.1| hypothetical protein PRABACTJOHN_03877 [Parabacteroides johnsonii
DSM 18315]
gi|218222097|gb|EEC94747.1| hypothetical protein PRABACTJOHN_03877 [Parabacteroides johnsonii
DSM 18315]
Length = 89
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 29 NGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 85
>gi|256389565|ref|YP_003111129.1| 30S ribosomal protein S18 [Catenulispora acidiphila DSM 44928]
gi|256355791|gb|ACU69288.1| ribosomal protein S18 [Catenulispora acidiphila DSM 44928]
Length = 78
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C +DYKD LL +F+S RGKI R++ + QR++A A+K +R
Sbjct: 7 RKPKKKVCGFCKDKVAYVDYKDTTLLRKFISDRGKIRARRVTGNCTQHQRDVAVAVKNSR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYTS 75
>gi|217977084|ref|YP_002361231.1| 30S ribosomal protein S18 [Methylocella silvestris BL2]
gi|254812948|sp|B8ESH9|RS18_METSB RecName: Full=30S ribosomal protein S18
gi|217502460|gb|ACK49869.1| ribosomal protein S18 [Methylocella silvestris BL2]
Length = 80
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 16 KTCPFSGPNAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 75
Query: 79 AYV 81
YV
Sbjct: 76 PYV 78
>gi|301632590|ref|XP_002945365.1| PREDICTED: 30S ribosomal protein S18-like [Xenopus (Silurana)
tropicalis]
Length = 93
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVAGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIYQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L ++ Y +
Sbjct: 70 RQLNTAIKRARFLAMLPYSD 89
>gi|310659868|ref|YP_003937589.1| 30S ribosomal protein S18 [Clostridium sticklandii DSM 519]
gi|308826646|emb|CBH22684.1| 30S ribosomal subunit protein S18 [Clostridium sticklandii]
Length = 78
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K P +GK IDYKD+ LL +++S+RGKI+P RI+ S K QR+L AIKR+R
Sbjct: 9 RRRRKKVDPFAGKKINMIDYKDVNLLKKYISERGKILPRRITGTSAKAQRKLTLAIKRSR 68
Query: 74 YLGLIAYV 81
+ L+ YV
Sbjct: 69 NIALLPYV 76
>gi|160890914|ref|ZP_02071917.1| hypothetical protein BACUNI_03359 [Bacteroides uniformis ATCC
8492]
gi|167764865|ref|ZP_02436986.1| hypothetical protein BACSTE_03257 [Bacteroides stercoris ATCC
43183]
gi|218128603|ref|ZP_03457407.1| hypothetical protein BACEGG_00173 [Bacteroides eggerthii DSM
20697]
gi|270295895|ref|ZP_06202095.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317475593|ref|ZP_07934855.1| ribosomal protein S18 [Bacteroides eggerthii 1_2_48FAA]
gi|317479666|ref|ZP_07938790.1| ribosomal protein S18 [Bacteroides sp. 4_1_36]
gi|319899907|ref|YP_004159635.1| SSU ribosomal protein S18P [Bacteroides helcogenes P 36-108]
gi|329957654|ref|ZP_08298129.1| ribosomal protein S18 [Bacteroides clarus YIT 12056]
gi|329960227|ref|ZP_08298669.1| ribosomal protein S18 [Bacteroides fluxus YIT 12057]
gi|156859913|gb|EDO53344.1| hypothetical protein BACUNI_03359 [Bacteroides uniformis ATCC
8492]
gi|167697534|gb|EDS14113.1| hypothetical protein BACSTE_03257 [Bacteroides stercoris ATCC
43183]
gi|217989205|gb|EEC55519.1| hypothetical protein BACEGG_00173 [Bacteroides eggerthii DSM
20697]
gi|270273299|gb|EFA19161.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904167|gb|EFV25997.1| ribosomal protein S18 [Bacteroides sp. 4_1_36]
gi|316908297|gb|EFV29989.1| ribosomal protein S18 [Bacteroides eggerthii 1_2_48FAA]
gi|319414938|gb|ADV42049.1| SSU ribosomal protein S18P [Bacteroides helcogenes P 36-108]
gi|328522531|gb|EGF49640.1| ribosomal protein S18 [Bacteroides clarus YIT 12056]
gi|328532900|gb|EGF59677.1| ribosomal protein S18 [Bacteroides fluxus YIT 12057]
Length = 90
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|224534030|ref|ZP_03674614.1| ribosomal protein S18 [Borrelia burgdorferi CA-11.2a]
gi|225549263|ref|ZP_03770236.1| ribosomal protein S18 [Borrelia burgdorferi 94a]
gi|224512866|gb|EEF83233.1| ribosomal protein S18 [Borrelia burgdorferi CA-11.2a]
gi|225370121|gb|EEG99561.1| ribosomal protein S18 [Borrelia burgdorferi 94a]
gi|312148403|gb|ADQ31062.1| ribosomal protein S18 [Borrelia burgdorferi JD1]
Length = 96
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKDFEFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|313664921|ref|YP_004046792.1| ribosomal protein S18 [Mycoplasma leachii PG50]
gi|312949974|gb|ADR24570.1| ribosomal protein S18 [Mycoplasma leachii PG50]
Length = 75
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
IDYKD+ LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+
Sbjct: 12 VNFFQKNNIKYIDYKDVELLKKFISPNGQILPRRITGTSPKDQRQLALAIKRARQMALLP 71
Query: 80 YV 81
YV
Sbjct: 72 YV 73
>gi|258517417|ref|YP_003193639.1| 30S ribosomal protein S18 [Desulfotomaculum acetoxidans DSM 771]
gi|257781122|gb|ACV65016.1| ribosomal protein S18 [Desulfotomaculum acetoxidans DSM 771]
Length = 76
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYK+I L +++++RGKI+P RIS K QR L +IKRAR + L+
Sbjct: 13 ICSFCVDKVQSIDYKEIPRLKKYITERGKILPRRISGNCAKHQRMLTVSIKRARNMALLP 72
Query: 80 YV 81
+
Sbjct: 73 FT 74
>gi|15594459|ref|NP_212247.1| 30S ribosomal protein S18 [Borrelia burgdorferi B31]
gi|216264194|ref|ZP_03436186.1| ribosomal protein S18 [Borrelia burgdorferi 156a]
gi|218249765|ref|YP_002374641.1| ribosomal protein S18 [Borrelia burgdorferi ZS7]
gi|221217474|ref|ZP_03588945.1| ribosomal protein S18 [Borrelia burgdorferi 72a]
gi|224532934|ref|ZP_03673544.1| ribosomal protein S18 [Borrelia burgdorferi WI91-23]
gi|225549865|ref|ZP_03770827.1| ribosomal protein S18 [Borrelia burgdorferi 118a]
gi|225552003|ref|ZP_03772943.1| ribosomal protein S18 [Borrelia sp. SV1]
gi|226320695|ref|ZP_03796253.1| ribosomal protein S18 [Borrelia burgdorferi 29805]
gi|226321976|ref|ZP_03797501.1| ribosomal protein S18 [Borrelia burgdorferi Bol26]
gi|6226082|sp|O51140|RS18_BORBU RecName: Full=30S ribosomal protein S18
gi|226735111|sp|B7J146|RS18_BORBZ RecName: Full=30S ribosomal protein S18
gi|2687990|gb|AAC66493.1| ribosomal protein S18 (rpsR) [Borrelia burgdorferi B31]
gi|215980667|gb|EEC21474.1| ribosomal protein S18 [Borrelia burgdorferi 156a]
gi|218164953|gb|ACK75014.1| ribosomal protein S18 [Borrelia burgdorferi ZS7]
gi|221192752|gb|EEE18968.1| ribosomal protein S18 [Borrelia burgdorferi 72a]
gi|224512133|gb|EEF82524.1| ribosomal protein S18 [Borrelia burgdorferi WI91-23]
gi|225369556|gb|EEG99007.1| ribosomal protein S18 [Borrelia burgdorferi 118a]
gi|225371001|gb|EEH00431.1| ribosomal protein S18 [Borrelia sp. SV1]
gi|226232566|gb|EEH31320.1| ribosomal protein S18 [Borrelia burgdorferi Bol26]
gi|226233911|gb|EEH32634.1| ribosomal protein S18 [Borrelia burgdorferi 29805]
gi|312149769|gb|ADQ29840.1| ribosomal protein S18 [Borrelia burgdorferi N40]
Length = 96
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|189463978|ref|ZP_03012763.1| hypothetical protein BACINT_00313 [Bacteroides intestinalis DSM
17393]
gi|224536025|ref|ZP_03676564.1| hypothetical protein BACCELL_00889 [Bacteroides cellulosilyticus
DSM 14838]
gi|189438551|gb|EDV07536.1| hypothetical protein BACINT_00313 [Bacteroides intestinalis DSM
17393]
gi|224522350|gb|EEF91455.1| hypothetical protein BACCELL_00889 [Bacteroides cellulosilyticus
DSM 14838]
Length = 89
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 85
>gi|134301135|ref|YP_001114631.1| 30S ribosomal protein S18 [Desulfotomaculum reducens MI-1]
gi|205557265|sp|A4J9Q3|RS18_DESRM RecName: Full=30S ribosomal protein S18
gi|134053835|gb|ABO51806.1| SSU ribosomal protein S18P [Desulfotomaculum reducens MI-1]
Length = 77
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C A IDYK+ L +++++RGKI+P RIS QR L AIKR+R + L+
Sbjct: 13 VCSFCVDKATSIDYKETSKLRKYVTERGKILPRRISGNCAHHQRMLTTAIKRSRNIALLP 72
Query: 80 YVN 82
+
Sbjct: 73 FST 75
>gi|254424438|ref|ZP_05038156.1| ribosomal protein S18 [Synechococcus sp. PCC 7335]
gi|196191927|gb|EDX86891.1| ribosomal protein S18 [Synechococcus sp. PCC 7335]
Length = 71
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ P+ + +IDYKD+ LL +F+++RGKI+P RI+ ++ K+QR+L KAIKRAR
Sbjct: 3 YFRRRVSPIKPE--EKIDYKDVDLLRKFVTERGKILPRRITGLTSKQQRDLTKAIKRARV 60
Query: 75 LGLIAYVN 82
+ L+ YVN
Sbjct: 61 VALLPYVN 68
>gi|330995927|ref|ZP_08319822.1| ribosomal protein S18 [Paraprevotella xylaniphila YIT 11841]
gi|332877546|ref|ZP_08445293.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|329574266|gb|EGG55841.1| ribosomal protein S18 [Paraprevotella xylaniphila YIT 11841]
gi|332684652|gb|EGJ57502.1| ribosomal protein S18 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 88
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 28 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARHLALLPFVT 84
>gi|182679260|ref|YP_001833406.1| 30S ribosomal protein S18 [Beijerinckia indica subsp. indica ATCC
9039]
gi|205557047|sp|B2IHD2|RS18_BEII9 RecName: Full=30S ribosomal protein S18
gi|182635143|gb|ACB95917.1| ribosomal protein S18 [Beijerinckia indica subsp. indica ATCC
9039]
Length = 80
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD RLL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 16 KTCPFSGPNAPKIDYKDTRLLSRYISERGKIVPSRITAVSAKKQRELAQAIKRARFLGLL 75
Query: 79 AYV 81
YV
Sbjct: 76 PYV 78
>gi|118588140|ref|ZP_01545550.1| 30S ribosomal protein S18 [Stappia aggregata IAM 12614]
gi|118439762|gb|EAV46393.1| 30S ribosomal protein S18 [Stappia aggregata IAM 12614]
Length = 82
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+
Sbjct: 18 KTCPFSGTNAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|121605292|ref|YP_982621.1| 30S ribosomal protein S18 [Polaromonas naphthalenivorans CJ2]
gi|166220969|sp|A1VPX2|RS18_POLNA RecName: Full=30S ribosomal protein S18
gi|120594261|gb|ABM37700.1| SSU ribosomal protein S18P [Polaromonas naphthalenivorans CJ2]
Length = 94
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+S+ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTAAGVEEIDYKDIDTLRDFVSENGKIIPARLTGTRAIFQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R++ A+KRAR+L ++ Y +
Sbjct: 70 RQINTAVKRARFLAMLPYSD 89
>gi|33240418|ref|NP_875360.1| 30S ribosomal protein S18 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|59798853|sp|Q7VBX4|RS18_PROMA RecName: Full=30S ribosomal protein S18
gi|33237945|gb|AAQ00013.1| Ribosomal protein S18 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 73
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K P+ IDYKD+ L +F+++RGKI+P R++ ++ K+QR+L A+KRAR +
Sbjct: 6 FKKKLSPIK--PGDPIDYKDVETLKKFITERGKILPRRLTGLTAKQQRDLTTAVKRARII 63
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 64 ALLPFVN 70
>gi|33865759|ref|NP_897318.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102]
gi|78184710|ref|YP_377145.1| 30S ribosomal protein S18 [Synechococcus sp. CC9902]
gi|78212867|ref|YP_381646.1| 30S ribosomal protein S18 [Synechococcus sp. CC9605]
gi|87124491|ref|ZP_01080340.1| ribosomal protein S18 [Synechococcus sp. RS9917]
gi|88808524|ref|ZP_01124034.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805]
gi|113953413|ref|YP_730544.1| 30S ribosomal protein S18 [Synechococcus sp. CC9311]
gi|116070581|ref|ZP_01467850.1| 30S ribosomal protein S18 [Synechococcus sp. BL107]
gi|148239628|ref|YP_001225015.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803]
gi|194476530|ref|YP_002048709.1| 30S ribosomal protein S18 [Paulinella chromatophora]
gi|254430586|ref|ZP_05044289.1| ribosomal protein S18 [Cyanobium sp. PCC 7001]
gi|260436039|ref|ZP_05790009.1| ribosomal protein S18 [Synechococcus sp. WH 8109]
gi|59798843|sp|Q7U6W1|RS18_SYNPX RecName: Full=30S ribosomal protein S18
gi|123327838|sp|Q0IAH8|RS18_SYNS3 RecName: Full=30S ribosomal protein S18
gi|123743319|sp|Q3AJZ1|RS18_SYNSC RecName: Full=30S ribosomal protein S18
gi|123743504|sp|Q3AVJ4|RS18_SYNS9 RecName: Full=30S ribosomal protein S18
gi|166222251|sp|A5GLA3|RS18_SYNPW RecName: Full=30S ribosomal protein S18
gi|205831408|sp|B1X3I0|RR18_PAUCH RecName: Full=30S ribosomal protein S18, organellar chromatophore
gi|33632929|emb|CAE07740.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102]
gi|78169004|gb|ABB26101.1| SSU ribosomal protein S18P [Synechococcus sp. CC9902]
gi|78197326|gb|ABB35091.1| ribosomal protein S18 [Synechococcus sp. CC9605]
gi|86168063|gb|EAQ69321.1| ribosomal protein S18 [Synechococcus sp. RS9917]
gi|88787512|gb|EAR18669.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805]
gi|113880764|gb|ABI45722.1| ribosomal protein S18 [Synechococcus sp. CC9311]
gi|116065986|gb|EAU71743.1| 30S ribosomal protein S18 [Synechococcus sp. BL107]
gi|147848167|emb|CAK23718.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803]
gi|171191537|gb|ACB42499.1| 30S ribosomal protein S18 [Paulinella chromatophora]
gi|197625039|gb|EDY37598.1| ribosomal protein S18 [Cyanobium sp. PCC 7001]
gi|260413913|gb|EEX07209.1| ribosomal protein S18 [Synechococcus sp. WH 8109]
Length = 73
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGDPIDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 63 VALLPFVN 70
>gi|168335183|ref|ZP_02693288.1| 30S ribosomal protein S18 (BS21) [Epulopiscium sp. 'N.t.
morphotype B']
Length = 77
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ +R RRK +G +I+YKDI L +F+S+RGKI+P RI+ S K QR+L A
Sbjct: 3 MQKRRGRRRRKVNQFAGDNIKKINYKDINTLKKFISERGKILPRRITGNSAKAQRKLTAA 62
Query: 69 IKRARYLGLIAYV 81
IKRAR++ L+ Y
Sbjct: 63 IKRARHIALLPYT 75
>gi|146283969|ref|YP_001174122.1| 30S ribosomal protein S18 [Pseudomonas stutzeri A1501]
gi|166220978|sp|A4VQM9|RS18_PSEU5 RecName: Full=30S ribosomal protein S18
gi|145572174|gb|ABP81280.1| 30S ribosomal protein S18 [Pseudomonas stutzeri A1501]
gi|327482297|gb|AEA85607.1| 30S ribosomal protein S18 [Pseudomonas stutzeri DSM 4166]
Length = 76
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|294340686|emb|CAZ89078.1| putative 30S ribosomal protein S18 RpsR [Thiomonas sp. 3As]
Length = 96
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ ++ R++ C + +IDYKD+ +L +++ +I+P+R++ S QR+L AI
Sbjct: 20 QQSSLFKRKRFCRFTVAKVEQIDYKDVDVLKDLIAENARIIPARLTGTSAHYQRQLNTAI 79
Query: 70 KRARYLGLIAYVNL 83
KRAR+L L+ Y +L
Sbjct: 80 KRARFLALLPYTDL 93
>gi|86743195|ref|YP_483595.1| 30S ribosomal protein S18 [Frankia sp. CcI3]
gi|123723312|sp|Q2J4C6|RS18_FRASC RecName: Full=30S ribosomal protein S18
gi|86570057|gb|ABD13866.1| SSU ribosomal protein S18P [Frankia sp. CcI3]
Length = 78
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C ID+KD LL +++S RGKI R+S + QR++A A+K +R
Sbjct: 7 RKPKKKVCVFCKDKVDYIDFKDTSLLRKYISDRGKIRARRVSGNCSQHQRDVATAVKNSR 66
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 67 EMALLPYT 74
>gi|317969855|ref|ZP_07971245.1| 30S ribosomal protein S18 [Synechococcus sp. CB0205]
Length = 73
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGEPIDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 63 VALLPFVN 70
>gi|333029249|ref|ZP_08457310.1| 30S ribosomal protein S18 [Bacteroides coprosuis DSM 18011]
gi|332739846|gb|EGJ70328.1| 30S ribosomal protein S18 [Bacteroides coprosuis DSM 18011]
Length = 90
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 NGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|150020533|ref|YP_001305887.1| 30S ribosomal protein S18 [Thermosipho melanesiensis BI429]
gi|166222253|sp|A6LKQ1|RS18_THEM4 RecName: Full=30S ribosomal protein S18
gi|149793054|gb|ABR30502.1| ribosomal protein S18 [Thermosipho melanesiensis BI429]
Length = 75
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+++ + K C L +DYKD++LL FL+++ KI+P R++ K QR + A
Sbjct: 1 MMKYRRKKKPKVCKLCQSKIDYVDYKDVKLLREFLTEKEKIIPRRVTGNCAKHQRMVKIA 60
Query: 69 IKRARYLGLIAYV 81
IKRAR + L+ YV
Sbjct: 61 IKRARQMALLPYV 73
>gi|318041407|ref|ZP_07973363.1| 30S ribosomal protein S18 [Synechococcus sp. CB0101]
Length = 73
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGDPIDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 63 VALLPFVN 70
>gi|329890142|ref|ZP_08268485.1| ribosomal protein S18 [Brevundimonas diminuta ATCC 11568]
gi|328845443|gb|EGF95007.1| ribosomal protein S18 [Brevundimonas diminuta ATCC 11568]
Length = 64
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP SG AP+IDYKD++LL R++S+RGKIVPSRI++VS KKQRELAKAIKRARYL L+ Y
Sbjct: 2 CPFSGANAPKIDYKDVKLLQRYVSERGKIVPSRITAVSAKKQRELAKAIKRARYLALLPY 61
Query: 81 V 81
V
Sbjct: 62 V 62
>gi|77919594|ref|YP_357409.1| 30S ribosomal protein S18 [Pelobacter carbinolicus DSM 2380]
gi|123756603|sp|Q3A318|RS18_PELCD RecName: Full=30S ribosomal protein S18
gi|77545677|gb|ABA89239.1| SSU ribosomal protein S18P [Pelobacter carbinolicus DSM 2380]
Length = 91
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P R RRK C +IDYK+IR L F+++RGKIVP RIS + QR+
Sbjct: 9 TPAKRSVRRRFSRRKGCRFCADNTLKIDYKEIRNLRYFITERGKIVPRRISGNCAEHQRK 68
Query: 65 LAKAIKRARYLGLIAYV 81
+ +AIKRAR + L+ +
Sbjct: 69 IREAIKRARNIALLPFT 85
>gi|119474660|ref|ZP_01615013.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2143]
gi|119450863|gb|EAW32096.1| ribosomal protein S18 [marine gamma proteobacterium HTCC2143]
Length = 75
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ IKRAR+L L+ Y +
Sbjct: 14 TAEGVDQIDYKDLDTLKAYVSETGKIVPSRITGTKAKYQRQLSTCIKRARFLALLPYTD 72
>gi|111226184|ref|YP_716978.1| 30S ribosomal protein S18 [Frankia alni ACN14a]
gi|123043775|sp|Q0RAR6|RS182_FRAAA RecName: Full=30S ribosomal protein S18 2
gi|111153716|emb|CAJ65474.1| 30S ribosomal subunit protein S18 [Frankia alni ACN14a]
Length = 73
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C ID+KD LL +++S RGKI R+S + QR++A A+K +R
Sbjct: 2 RKPKKKVCVFCKDKVEYIDFKDTSLLRKYISDRGKIRARRVSGNCSQHQRDVATAVKNSR 61
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 62 EMALLPYT 69
>gi|258645631|ref|ZP_05733100.1| ribosomal protein S18 [Dialister invisus DSM 15470]
gi|260402992|gb|EEW96539.1| ribosomal protein S18 [Dialister invisus DSM 15470]
Length = 77
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R RRK C +DYKDI +L RF+S+RGKI+P R++ + K QR++ AIKR
Sbjct: 6 RVRRPRRKICQGCVDHIENVDYKDIAMLRRFISERGKILPRRVTGICAKHQRKINLAIKR 65
Query: 72 ARYLGLIAY 80
AR + L+ +
Sbjct: 66 ARAIALLPF 74
>gi|307546115|ref|YP_003898594.1| 30S ribosomal protein S18 [Halomonas elongata DSM 2581]
gi|307218139|emb|CBV43409.1| 30S ribosomal protein S18 [Halomonas elongata DSM 2581]
Length = 75
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++++ GKIVPSRI+ + QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGVKQIDYKDLDTLKAYVTETGKIVPSRITGTKARYQRQLSTAIKRARYLALLPYTD 72
>gi|238650507|ref|YP_002916359.1| 30S ribosomal protein S18 [Rickettsia peacockii str. Rustic]
gi|259494818|sp|C4K160|RS18_RICPU RecName: Full=30S ribosomal protein S18
gi|238624605|gb|ACR47311.1| 30S ribosomal protein S18 [Rickettsia peacockii str. Rustic]
Length = 95
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVSNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|304383092|ref|ZP_07365567.1| 30S ribosomal protein S18 [Prevotella marshii DSM 16973]
gi|304335778|gb|EFM02033.1| 30S ribosomal protein S18 [Prevotella marshii DSM 16973]
Length = 88
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 28 SGIKYIDYKDPDFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 84
>gi|89068231|ref|ZP_01155641.1| 30S ribosomal protein S18 [Oceanicola granulosus HTCC2516]
gi|89046148|gb|EAR52206.1| 30S ribosomal protein S18 [Oceanicola granulosus HTCC2516]
Length = 75
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 54/72 (75%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK+ P G+ AP+IDYKD R L R++S+RGKIVPSRI++V K QR+LA+A
Sbjct: 1 MAAKPFFRRRKTDPFEGENAPKIDYKDTRTLQRYVSERGKIVPSRITAVGSKNQRQLAQA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|157825190|ref|YP_001492910.1| 30S ribosomal protein S18 [Rickettsia akari str. Hartford]
gi|166220982|sp|A8GLX7|RS18_RICAH RecName: Full=30S ribosomal protein S18
gi|157799148|gb|ABV74402.1| 30S ribosomal protein S18 [Rickettsia akari str. Hartford]
Length = 95
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVHNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|89054112|ref|YP_509563.1| 30S ribosomal protein S18 [Jannaschia sp. CCS1]
gi|123286752|sp|Q28RX4|RS18_JANSC RecName: Full=30S ribosomal protein S18
gi|88863661|gb|ABD54538.1| SSU ribosomal protein S18P [Jannaschia sp. CCS1]
Length = 75
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRK+ P G+ AP+IDYKD RLL R++S+RGKIVPSRI++V K QR LAKA
Sbjct: 1 MAAKPFFRRRKTDPFEGENAPKIDYKDTRLLQRYISERGKIVPSRITAVGAKNQRALAKA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|312601294|gb|ADQ90549.1| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 168]
Length = 87
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKDI +L RF++ GKI PSRI+ K QR+LA A+KRAR++ L+ +
Sbjct: 14 CQFCEAKLFYIDYKDIEVLQRFINTFGKIQPSRITGNCAKHQRKLALAVKRARFVALLPF 73
Query: 81 VN 82
+
Sbjct: 74 IG 75
>gi|54020444|ref|YP_115817.1| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 232]
gi|161611220|ref|YP_279087.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae J]
gi|161611227|ref|YP_287690.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae 7448]
gi|59798622|sp|Q600Z8|RS18_MYCH2 RecName: Full=30S ribosomal protein S18
gi|166221070|sp|Q4A872|RS18_MYCH7 RecName: Full=30S ribosomal protein S18
gi|166221071|sp|Q4AA45|RS18_MYCHJ RecName: Full=30S ribosomal protein S18
gi|53987617|gb|AAV27818.1| 30s ribosomal protein S18 [Mycoplasma hyopneumoniae 232]
gi|144227556|gb|AAZ44376.2| 30S ribosomal protein S18 [Mycoplasma hyopneumoniae J]
gi|144575366|gb|AAZ53667.2| 30s ribosomal protein S18 [Mycoplasma hyopneumoniae 7448]
Length = 87
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYKDI +L RF++ GKI PSRI+ K QR+LA A+KRAR++ L+ +
Sbjct: 14 CQFCEAKLFYIDYKDIEVLQRFINTFGKIQPSRITGNCAKHQRKLALAVKRARFVALLPF 73
Query: 81 VN 82
+
Sbjct: 74 IG 75
>gi|256829608|ref|YP_003158336.1| 30S riboosomal protein S18 [Desulfomicrobium baculatum DSM 4028]
gi|256578784|gb|ACU89920.1| ribosomal protein S18 [Desulfomicrobium baculatum DSM 4028]
Length = 87
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C +DYK +LN F++ RGKI+ SRI+ K QR L + +
Sbjct: 3 FKKKFAPRRKYCRFCENPEILLDYKHPEVLNDFVTDRGKIIASRITGTCAKHQRALTREV 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALMFYT 74
>gi|34540404|ref|NP_904883.1| 30S ribosomal protein S18 [Porphyromonas gingivalis W83]
gi|188994504|ref|YP_001928756.1| 30S ribosomal protein S18 [Porphyromonas gingivalis ATCC 33277]
gi|59798820|sp|Q7MWL2|RS18_PORGI RecName: Full=30S ribosomal protein S18
gi|229560051|sp|B2RIG4|RS18_PORG3 RecName: Full=30S ribosomal protein S18
gi|34396717|gb|AAQ65782.1| ribosomal protein S18 [Porphyromonas gingivalis W83]
gi|188594184|dbj|BAG33159.1| 30S ribosomal protein S18 [Porphyromonas gingivalis ATCC 33277]
Length = 90
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 SGIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARHLALLPYVT 86
>gi|220924504|ref|YP_002499806.1| 30S ribosomal protein S18 [Methylobacterium nodulans ORS 2060]
gi|254812947|sp|B8IED1|RS18_METNO RecName: Full=30S ribosomal protein S18
gi|219949111|gb|ACL59503.1| ribosomal protein S18 [Methylobacterium nodulans ORS 2060]
Length = 82
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/63 (69%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LG +
Sbjct: 18 KTCPFSGPNAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGFL 77
Query: 79 AYV 81
YV
Sbjct: 78 PYV 80
>gi|328544026|ref|YP_004304135.1| 30S ribosomal protein S18 [polymorphum gilvum SL003B-26A1]
gi|326413770|gb|ADZ70833.1| 30S ribosomal protein S18 [Polymorphum gilvum SL003B-26A1]
Length = 82
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/63 (74%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG GAP IDYKDIRLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+
Sbjct: 18 KTCPFSGAGAPAIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|254504113|ref|ZP_05116264.1| ribosomal protein S18 [Labrenzia alexandrii DFL-11]
gi|222440184|gb|EEE46863.1| ribosomal protein S18 [Labrenzia alexandrii DFL-11]
Length = 82
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKDIRLL R++S+RGKIVPSRI++VS KKQREL++AIKRAR LGL+
Sbjct: 18 KTCPFSGSNAPKIDYKDIRLLQRYISERGKIVPSRITAVSAKKQRELSRAIKRARLLGLL 77
Query: 79 AYV 81
+V
Sbjct: 78 PFV 80
>gi|330836667|ref|YP_004411308.1| 30S ribosomal protein S18P [Spirochaeta coccoides DSM 17374]
gi|329748570|gb|AEC01926.1| SSU ribosomal protein S18P [Spirochaeta coccoides DSM 17374]
Length = 95
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR R+K C + DYK+ LL RF+++RGKI+P RI+ K QR L A+K
Sbjct: 24 RRPGGFRKKVCKFTQMNVTP-DYKNPDLLRRFITERGKILPRRITGTCAKNQRALTLAVK 82
Query: 71 RARYLGLIAY 80
RAR L + +
Sbjct: 83 RARVLAYLPF 92
>gi|159903436|ref|YP_001550780.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9211]
gi|159888612|gb|ABX08826.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9211]
Length = 73
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K P+ IDYKD+ L +F+++RGKI+P R++ ++ ++QR+L A+KRAR +
Sbjct: 6 FKKKLSPIK--PGDPIDYKDVETLKKFITERGKILPRRLTGLTAQQQRDLTVAVKRARII 63
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 64 ALLPFVN 70
>gi|300869626|ref|ZP_07114206.1| 30S ribosomal protein S18 [Oscillatoria sp. PCC 6506]
gi|300332404|emb|CBN59406.1| 30S ribosomal protein S18 [Oscillatoria sp. PCC 6506]
Length = 71
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ K+QR+L IKRAR
Sbjct: 2 TYFRRRVSPIK--PGDPIDYKDVDLLRKFVTERGKILPRRITGLTAKQQRDLTTGIKRAR 59
Query: 74 YLGLIAYVN 82
L L+ +VN
Sbjct: 60 ILALMPFVN 68
>gi|330443831|ref|YP_004376817.1| 30S ribosomal protein S18 [Chlamydophila pecorum E58]
gi|328806941|gb|AEB41114.1| ribosomal protein S18 [Chlamydophila pecorum E58]
Length = 82
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR +++ CP G IDYKD+ L +F+++RGKI+P RI+ VS + Q LA+AI
Sbjct: 10 QRRKRFNKK--CPFVSAGWKTIDYKDVETLKKFITERGKILPRRITGVSSRFQGILAQAI 67
Query: 70 KRARYLGLIAYVN 82
KRAR LGL+ +V
Sbjct: 68 KRARLLGLLPFVG 80
>gi|256370726|ref|YP_003108551.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri SMDSEM]
gi|256009518|gb|ACU52878.1| ribosomal protein S18 [Candidatus Sulcia muelleri SMDSEM]
Length = 165
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+K C IDYK+ + L +FL++RG+I+P RI+ S K Q+ L KAIKR
Sbjct: 92 KTKPEKKYCFFLKNKIKYIDYKNPKFLIKFLNERGEILPRRITGTSKKFQKRLTKAIKRC 151
Query: 73 RYLGLIAYVN 82
+ +GL+ Y+
Sbjct: 152 KQIGLLPYIT 161
>gi|153808732|ref|ZP_01961400.1| hypothetical protein BACCAC_03031 [Bacteroides caccae ATCC 43185]
gi|255691414|ref|ZP_05415089.1| ribosomal protein S18 [Bacteroides finegoldii DSM 17565]
gi|293368836|ref|ZP_06615440.1| ribosomal protein S18 [Bacteroides ovatus SD CMC 3f]
gi|298483612|ref|ZP_07001787.1| ribosomal protein S18 [Bacteroides sp. D22]
gi|149128558|gb|EDM19776.1| hypothetical protein BACCAC_03031 [Bacteroides caccae ATCC 43185]
gi|260623060|gb|EEX45931.1| ribosomal protein S18 [Bacteroides finegoldii DSM 17565]
gi|292636141|gb|EFF54629.1| ribosomal protein S18 [Bacteroides ovatus SD CMC 3f]
gi|298270182|gb|EFI11768.1| ribosomal protein S18 [Bacteroides sp. D22]
Length = 90
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|239616720|ref|YP_002940042.1| ribosomal protein S18 [Kosmotoga olearia TBF 19.5.1]
gi|239505551|gb|ACR79038.1| ribosomal protein S18 [Kosmotoga olearia TBF 19.5.1]
Length = 75
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
L +DYK+ LL F++++GKIVP RI+ K QR + AIKRAR++ L+ +
Sbjct: 15 LCAMKVTYVDYKNTALLKEFMTEKGKIVPKRITGNCAKHQRMVKTAIKRARHMALLPFT 73
>gi|269925896|ref|YP_003322519.1| ribosomal protein S18 [Thermobaculum terrenum ATCC BAA-798]
gi|269789556|gb|ACZ41697.1| ribosomal protein S18 [Thermobaculum terrenum ATCC BAA-798]
Length = 116
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R RRK C ++DYKDI + R+LS R KI R + K QR LA A+K
Sbjct: 40 RGRYVPRRKVCAFCADHIDKVDYKDIARIGRYLSDRAKIEGRRKTGTCAKHQRSLAVALK 99
Query: 71 RARYLGLIAYV 81
RARY+ L+ Y
Sbjct: 100 RARYMALMPYT 110
>gi|89898004|ref|YP_515114.1| 30S ribosomal protein S18 [Chlamydophila felis Fe/C-56]
gi|329943157|ref|ZP_08291931.1| ribosomal protein S18 [Chlamydophila psittaci Cal10]
gi|332287739|ref|YP_004422640.1| 30S ribosomal protein S18 [Chlamydophila psittaci 6BC]
gi|123763226|sp|Q255R9|RS18_CHLFF RecName: Full=30S ribosomal protein S18
gi|89331376|dbj|BAE80969.1| 30S ribosomal protein S18 [Chlamydophila felis Fe/C-56]
gi|313848310|emb|CBY17313.1| 30S ribosomal protein S18 [Chlamydophila psittaci RD1]
gi|325507290|gb|ADZ18928.1| 30S ribosomal protein S18 [Chlamydophila psittaci 6BC]
gi|328814704|gb|EGF84694.1| ribosomal protein S18 [Chlamydophila psittaci Cal10]
gi|328914993|gb|AEB55826.1| ribosomal protein S18 [Chlamydophila psittaci 6BC]
Length = 82
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 7 TPLLRRNVSHRR--KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+ +R K CP G IDYKD L +F+++RGKI+P RI+ VS + Q
Sbjct: 3 KPVHNNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITERGKILPRRITGVSSRFQGI 62
Query: 65 LAKAIKRARYLGLIAYVN 82
L AIKRAR++G + +V
Sbjct: 63 LTLAIKRARHIGFLPFVG 80
>gi|51598376|ref|YP_072564.1| 30S ribosomal protein S18 [Borrelia garinii PBi]
gi|59798661|sp|Q662P9|RS18_BORGA RecName: Full=30S ribosomal protein S18
gi|51572947|gb|AAU06972.1| ribosomal protein S18 [Borrelia garinii PBi]
Length = 96
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYKD L +F++++GKI+P RI+ S K QR LA +KRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKDFDFLKKFITEQGKILPKRITGTSAKHQRRLALEVKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|311897277|dbj|BAJ29685.1| putative ribosomal protein S18 [Kitasatospora setae KM-6054]
Length = 78
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C A +DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+
Sbjct: 13 VCVFCKDKATYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREVALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTS 75
>gi|323345547|ref|ZP_08085770.1| 30S ribosomal protein S18 [Prevotella oralis ATCC 33269]
gi|323093661|gb|EFZ36239.1| 30S ribosomal protein S18 [Prevotella oralis ATCC 33269]
Length = 90
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|220915256|ref|YP_002490560.1| ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-1]
gi|254765404|sp|B8J802|RS18_ANAD2 RecName: Full=30S ribosomal protein S18
gi|219953110|gb|ACL63494.1| ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 133
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C A ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 67 KVCRFCADKALKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 126
Query: 79 AYV 81
Y
Sbjct: 127 PYT 129
>gi|197120545|ref|YP_002132496.1| 30S ribosomal protein S18 [Anaeromyxobacter sp. K]
gi|229470520|sp|B4ULC0|RS18_ANASK RecName: Full=30S ribosomal protein S18
gi|196170394|gb|ACG71367.1| ribosomal protein S18 [Anaeromyxobacter sp. K]
Length = 135
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C A ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 69 KVCRFCADKALKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 128
Query: 79 AYV 81
Y
Sbjct: 129 PYT 131
>gi|57239413|ref|YP_180549.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579385|ref|YP_197597.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58617440|ref|YP_196639.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str. Gardel]
gi|75507479|sp|Q5FG28|RS18_EHRRG RecName: Full=30S ribosomal protein S18
gi|81672777|sp|Q5HAJ5|RS18_EHRRW RecName: Full=30S ribosomal protein S18
gi|57161492|emb|CAH58418.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417052|emb|CAI28165.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str. Gardel]
gi|58418011|emb|CAI27215.1| 30S ribosomal protein S18 [Ehrlichia ruminantium str.
Welgevonden]
Length = 95
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +K
Sbjct: 16 TAYSPLAYLKRPYFRRSKACPLEQCANEDIDYKNKALLSKFTSEYGRILPSRITSVSSRK 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L+ AIKRARYL L+ Y
Sbjct: 76 QRLLSTAIKRARYLALLPYC 95
>gi|220905285|ref|YP_002480597.1| 30S ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254765423|sp|B8J3A9|RS18_DESDA RecName: Full=30S ribosomal protein S18
gi|219869584|gb|ACL49919.1| ribosomal protein S18 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 87
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKDLPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|71278137|ref|YP_267175.1| 30S ribosomal protein S18 [Colwellia psychrerythraea 34H]
gi|123774971|sp|Q489T9|RS18_COLP3 RecName: Full=30S ribosomal protein S18
gi|71143877|gb|AAZ24350.1| ribosomal protein S18 [Colwellia psychrerythraea 34H]
Length = 75
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ +GA IDYKDI L ++++ GKIVPSRI+ + K QR+L +AIKRARYL L+ Y +L
Sbjct: 14 TAEGATSIDYKDIATLKNYITESGKIVPSRITGTAAKYQRQLTRAIKRARYLSLLPYTDL 73
>gi|331007839|ref|ZP_08330938.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC1989]
gi|330418356|gb|EGG92923.1| SSU ribosomal protein S18p [gamma proteobacterium IMCC1989]
Length = 76
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G +IDYKD+ L ++S+ GKIVPSRI+ K QR+L+ AIKRARYL L+ Y +
Sbjct: 14 TAEGTKQIDYKDLETLKAYISETGKIVPSRITGTKAKYQRQLSTAIKRARYLALVPYTD 72
>gi|85057285|ref|YP_456201.1| 30S ribosomal protein S18 [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123725354|sp|Q2NKC1|RS18_AYWBP RecName: Full=30S ribosomal protein S18
gi|84789390|gb|ABC65122.1| SSU ribosomal protein S18P [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 79
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ RRK C + +ID+KDI LL RF++ RG+I+ R+++ S + QR+LA AIK
Sbjct: 7 KNTFKKRRKVCFFTENKVTKIDFKDIELLQRFITDRGRILSRRVTNTSARWQRQLAIAIK 66
Query: 71 RARYLGLIAYV 81
RAR++ LI ++
Sbjct: 67 RARHMALIPFI 77
>gi|83591753|ref|YP_425505.1| 30S ribosomal protein S18 [Rhodospirillum rubrum ATCC 11170]
gi|123753309|sp|Q2RXC7|RS18_RHORT RecName: Full=30S ribosomal protein S18
gi|83574667|gb|ABC21218.1| SSU ribosomal protein S18P [Rhodospirillum rubrum ATCC 11170]
Length = 78
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG GAP+IDYKDI+LL RF+S+RGKIVPSRI++VS KKQRELA+AIKRAR+L L+
Sbjct: 14 KTCPFSGAGAPKIDYKDIKLLLRFVSERGKIVPSRITAVSAKKQRELARAIKRARFLSLL 73
Query: 79 AYV 81
YV
Sbjct: 74 PYV 76
>gi|121607971|ref|YP_995778.1| 30S ribosomal protein S18 [Verminephrobacter eiseniae EF01-2]
gi|241764689|ref|ZP_04762701.1| ribosomal protein S18 [Acidovorax delafieldii 2AN]
gi|166222255|sp|A1WGK3|RS18_VEREI RecName: Full=30S ribosomal protein S18
gi|121552611|gb|ABM56760.1| SSU ribosomal protein S18P [Verminephrobacter eiseniae EF01-2]
gi|241365859|gb|EER60508.1| ribosomal protein S18 [Acidovorax delafieldii 2AN]
Length = 93
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVTGVEEIDYKDVDTLRDFIAENGKIIPARLTGTRAIFQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L L+ Y +
Sbjct: 70 RQLNTAIKRARFLALVPYSD 89
>gi|152997467|ref|YP_001342302.1| 30S ribosomal protein S18 [Marinomonas sp. MWYL1]
gi|189029680|sp|A6W0Y8|RS18_MARMS RecName: Full=30S ribosomal protein S18
gi|150838391|gb|ABR72367.1| ribosomal protein S18 [Marinomonas sp. MWYL1]
Length = 76
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ + QR+LA AIKRARY+ ++ Y +
Sbjct: 14 TAEGVKEIDYKDLDTLKGYITETGKIVPSRITGTKARYQRQLATAIKRARYIAILPYTD 72
>gi|258591291|emb|CBE67588.1| 30S ribosomal subunit protein S18 [NC10 bacterium 'Dutch
sediment']
Length = 78
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L +R R+K C +D+KD + L F++ RGKI+P RIS QR+L A
Sbjct: 2 LKKRRSFRRQKVCKWCVDKVETVDFKDAKRLRNFITDRGKIIPRRISGNCAGHQRQLGGA 61
Query: 69 IKRARYLGLIAY 80
IKRAR + L+ +
Sbjct: 62 IKRARSIALLPF 73
>gi|296136558|ref|YP_003643800.1| ribosomal protein S18 [Thiomonas intermedia K12]
gi|295796680|gb|ADG31470.1| ribosomal protein S18 [Thiomonas intermedia K12]
Length = 96
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 46/74 (62%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ ++ R++ C + RIDYKD+ +L +++ +I+P+R++ S QR+L AI
Sbjct: 20 QQSSLFKRKRFCRFTVAKVERIDYKDVDVLKDLIAENARIIPARLTGTSAHYQRQLNTAI 79
Query: 70 KRARYLGLIAYVNL 83
KRAR+L L+ Y +L
Sbjct: 80 KRARFLALLPYTDL 93
>gi|229586275|ref|YP_002844776.1| 30S ribosomal protein S18 [Rickettsia africae ESF-5]
gi|259494817|sp|C3PM73|RS18_RICAE RecName: Full=30S ribosomal protein S18
gi|228021325|gb|ACP53033.1| 30S ribosomal protein S18 [Rickettsia africae ESF-5]
Length = 95
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|150387887|ref|YP_001317936.1| ribosomal protein S18 [Alkaliphilus metalliredigens QYMF]
gi|205556760|sp|A6TJA9|RS18_ALKMQ RecName: Full=30S ribosomal protein S18
gi|149947749|gb|ABR46277.1| ribosomal protein S18 [Alkaliphilus metalliredigens QYMF]
Length = 76
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +IDYK++ L +++++RGKI+P RIS QR++ +AIKR+R++ L+
Sbjct: 13 VCTFCADKSSKIDYKEVHKLKKYVTERGKILPRRISGNCAIHQRDITQAIKRSRHIALLP 72
Query: 80 YV 81
Y
Sbjct: 73 YT 74
>gi|313202816|ref|YP_004041473.1| SSU ribosomal protein s18p [Paludibacter propionicigenes WB4]
gi|312442132|gb|ADQ78488.1| SSU ribosomal protein S18P [Paludibacter propionicigenes WB4]
Length = 89
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P R++ S K QR++A+A+KRAR++ L+ YV
Sbjct: 29 SGIRYIDYKDPEFLKKFLNEQGKILPRRLTGTSLKFQRKVAQAVKRARHIALLPYVT 85
>gi|86156546|ref|YP_463331.1| 30S ribosomal protein S18 [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723166|sp|Q2IM64|RS18_ANADE RecName: Full=30S ribosomal protein S18
gi|85773057|gb|ABC79894.1| SSU ribosomal protein S18P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 135
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C ++DYKD + FL++RGKI+P RIS K QRE+A AIKR R L ++
Sbjct: 69 KVCRFCADKTLKVDYKDQGQMKYFLTERGKIIPRRISGNCAKHQREVATAIKRGRMLAIL 128
Query: 79 AYV 81
Y
Sbjct: 129 PYT 131
>gi|53715145|ref|YP_101137.1| 30S ribosomal protein S18 [Bacteroides fragilis YCH46]
gi|60683081|ref|YP_213225.1| 30S ribosomal protein S18 [Bacteroides fragilis NCTC 9343]
gi|253566275|ref|ZP_04843729.1| 30S ribosomal protein S18 [Bacteroides sp. 3_2_5]
gi|265766975|ref|ZP_06094804.1| ribosomal protein S18 [Bacteroides sp. 2_1_16]
gi|59798649|sp|Q64PH8|RS18_BACFR RecName: Full=30S ribosomal protein S18
gi|81313865|sp|Q5L9B6|RS18_BACFN RecName: Full=30S ribosomal protein S18
gi|52218010|dbj|BAD50603.1| 30S ribosomal protein S18 [Bacteroides fragilis YCH46]
gi|60494515|emb|CAH09312.1| putative 30S ribosomal protein S18 [Bacteroides fragilis NCTC
9343]
gi|251945379|gb|EES85817.1| 30S ribosomal protein S18 [Bacteroides sp. 3_2_5]
gi|263253352|gb|EEZ24828.1| ribosomal protein S18 [Bacteroides sp. 2_1_16]
gi|301164596|emb|CBW24155.1| putative 30S ribosomal protein S18 [Bacteroides fragilis 638R]
Length = 90
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 86
>gi|15891988|ref|NP_359702.1| 30S ribosomal protein S18 [Rickettsia conorii str. Malish 7]
gi|34580977|ref|ZP_00142457.1| 30S ribosomal protein S18 [Rickettsia sibirica 246]
gi|157827936|ref|YP_001494178.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932624|ref|YP_001649413.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. Iowa]
gi|20140122|sp|Q92JK2|RS18_RICCN RecName: Full=30S ribosomal protein S18
gi|166220985|sp|A8GQJ5|RS18_RICRS RecName: Full=30S ribosomal protein S18
gi|189029685|sp|B0BVY1|RS18_RICRO RecName: Full=30S ribosomal protein S18
gi|15619102|gb|AAL02603.1| 30S ribosomal protein S18 [Rickettsia conorii str. Malish 7]
gi|28262362|gb|EAA25866.1| 30S ribosomal protein S18 [Rickettsia sibirica 246]
gi|157800417|gb|ABV75670.1| 30S ribosomal protein S18 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907711|gb|ABY72007.1| SSU ribosomal protein S18P [Rickettsia rickettsii str. Iowa]
Length = 95
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|325298154|ref|YP_004258071.1| 30S ribosomal protein S18 [Bacteroides salanitronis DSM 18170]
gi|324317707|gb|ADY35598.1| 30S ribosomal protein S18 [Bacteroides salanitronis DSM 18170]
Length = 89
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 85
>gi|302339368|ref|YP_003804574.1| ribosomal protein S18 [Spirochaeta smaragdinae DSM 11293]
gi|301636553|gb|ADK81980.1| ribosomal protein S18 [Spirochaeta smaragdinae DSM 11293]
Length = 103
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ ++K C G DYKD L RF+++RGKI+P RI+ K QR LAK IKR
Sbjct: 33 KRPFFKKKVCRFCT-GNMVADYKDPDALGRFVTERGKILPRRITGTCAKHQRLLAKEIKR 91
Query: 72 ARYLGLIAYV 81
AR L + +V
Sbjct: 92 ARVLAYLPFV 101
>gi|72382180|ref|YP_291535.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. NATL2A]
gi|124025720|ref|YP_001014836.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. NATL1A]
gi|123759898|sp|Q46KZ6|RS18_PROMT RecName: Full=30S ribosomal protein S18
gi|166220971|sp|A2C261|RS18_PROM1 RecName: Full=30S ribosomal protein S18
gi|72002030|gb|AAZ57832.1| SSU ribosomal protein S18P [Prochlorococcus marinus str. NATL2A]
gi|123960788|gb|ABM75571.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. NATL1A]
Length = 73
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K P+ IDYKD+ LL +F++ RGKI+P R++ ++ K+QR+L A+KRAR +
Sbjct: 6 FKQKLSPIK--PGDPIDYKDVELLKKFITDRGKILPRRLTGLTAKQQRDLTTAVKRARII 63
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 64 ALLPFVN 70
>gi|170740809|ref|YP_001769464.1| 30S ribosomal protein S18 [Methylobacterium sp. 4-46]
gi|205558315|sp|B0UL30|RS18_METS4 RecName: Full=30S ribosomal protein S18
gi|168195083|gb|ACA17030.1| ribosomal protein S18 [Methylobacterium sp. 4-46]
Length = 83
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/63 (69%), Positives = 57/63 (90%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD++LL+R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LG +
Sbjct: 19 KTCPFSGPNAPKIDYKDVKLLSRYVSERGKIVPSRITAVSAKKQRELAQAIKRARFLGFL 78
Query: 79 AYV 81
YV
Sbjct: 79 PYV 81
>gi|326329083|ref|ZP_08195412.1| ribosomal protein S18 [Nocardioidaceae bacterium Broad-1]
gi|325953165|gb|EGD45176.1| ribosomal protein S18 [Nocardioidaceae bacterium Broad-1]
Length = 78
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C + A +DYKD LL +F+S RGKI R++ + QR++A A+K AR
Sbjct: 7 RKPKKKVCQFCKEKATGVDYKDATLLRKFISDRGKIRARRVTGNCVQHQRDVAIAVKNAR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EVALLPYTS 75
>gi|309390332|gb|ADO78212.1| SSU ribosomal protein S18P [Halanaerobium praevalens DSM 2228]
Length = 71
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R KSC +IDYKD+R LNR+L+ RGKI+P R++ K Q+ + KA+KRAR +
Sbjct: 5 RNKSCHFCANENKKIDYKDLRTLNRYLTDRGKIMPRRVTGNCSKHQKLITKAVKRARSVA 64
Query: 77 LIAYV 81
L+ YV
Sbjct: 65 LLPYV 69
>gi|42560585|ref|NP_975036.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|331703042|ref|YP_004399729.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|59798739|sp|Q6MUK6|RS18_MYCMS RecName: Full=30S ribosomal protein S18
gi|42492081|emb|CAE76678.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|256384267|gb|ACU78837.1| ribosomal protein S18 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256385100|gb|ACU79669.1| ribosomal protein S18 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455226|gb|ADH21461.1| ribosomal protein S18 [synthetic Mycoplasma mycoides JCVI-syn1.0]
gi|301320649|gb|ADK69292.1| ribosomal protein S18 [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
gi|328801597|emb|CBW53750.1| 30S ribosomal protein S18 [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 75
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 38/62 (61%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
IDYKDI LL +F+S G+I+P RI+ S K QR+LA AIKRAR + L+
Sbjct: 12 VNFFQKNNIKYIDYKDIELLKKFISPNGQILPRRITGTSPKDQRQLALAIKRARQMALLP 71
Query: 80 YV 81
YV
Sbjct: 72 YV 73
>gi|228469704|ref|ZP_04054672.1| ribosomal protein S18 [Porphyromonas uenonis 60-3]
gi|228308723|gb|EEK17449.1| ribosomal protein S18 [Porphyromonas uenonis 60-3]
Length = 88
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
++K C +DYKD L +FL+ +GKI+P RI+ S K QR +A+A+KRAR+L
Sbjct: 18 QQKKYCRFKKARIKFVDYKDPEFLKKFLNDQGKILPRRITGNSLKFQRRVAQAVKRARHL 77
Query: 76 GLIAYVN 82
L+ +V
Sbjct: 78 ALLPFVT 84
>gi|239946941|ref|ZP_04698694.1| ribosomal protein S18 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921217|gb|EER21241.1| ribosomal protein S18 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 95
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|21222315|ref|NP_628094.1| 30S ribosomal protein S18 [Streptomyces coelicolor A3(2)]
gi|29830830|ref|NP_825464.1| 30S ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|239930204|ref|ZP_04687157.1| 30S ribosomal protein S18 [Streptomyces ghanaensis ATCC 14672]
gi|239980816|ref|ZP_04703340.1| 30S ribosomal protein S18 [Streptomyces albus J1074]
gi|256786585|ref|ZP_05525016.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|289770476|ref|ZP_06529854.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|290959032|ref|YP_003490214.1| 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|291438548|ref|ZP_06577938.1| 30S ribosomal protein S18 1 [Streptomyces ghanaensis ATCC 14672]
gi|291452676|ref|ZP_06592066.1| 30S ribosomal protein S18 1 [Streptomyces albus J1074]
gi|294630308|ref|ZP_06708868.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|297200910|ref|ZP_06918307.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|302552665|ref|ZP_07305007.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|329938668|ref|ZP_08288064.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
gi|54038990|sp|P66471|RS181_STRAW RecName: Full=30S ribosomal protein S18 1
gi|54041926|sp|P66470|RS181_STRCO RecName: Full=30S ribosomal protein S18 1
gi|4808404|emb|CAB42736.1| putative 30S ribosomal protein S18 [Streptomyces coelicolor
A3(2)]
gi|29607943|dbj|BAC71999.1| putative ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|197716408|gb|EDY60442.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|260648558|emb|CBG71669.1| putative 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|289700675|gb|EFD68104.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|291341443|gb|EFE68399.1| 30S ribosomal protein S18 1 [Streptomyces ghanaensis ATCC 14672]
gi|291355625|gb|EFE82527.1| 30S ribosomal protein S18 1 [Streptomyces albus J1074]
gi|292833641|gb|EFF91990.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|302470283|gb|EFL33376.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|329302159|gb|EGG46051.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
Length = 78
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKVTYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|15603919|ref|NP_220434.1| 30S ribosomal protein S18 [Rickettsia prowazekii str. Madrid E]
gi|6226086|sp|Q9ZEA5|RS18_RICPR RecName: Full=30S ribosomal protein S18
gi|3860610|emb|CAA14511.1| 30S RIBOSOMAL PROTEIN S18 (rpsR) [Rickettsia prowazekii]
gi|292571636|gb|ADE29551.1| 30S ribosomal protein S18 [Rickettsia prowazekii Rp22]
Length = 95
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|255263624|ref|ZP_05342966.1| ribosomal protein S18 [Thalassiobium sp. R2A62]
gi|255105959|gb|EET48633.1| ribosomal protein S18 [Thalassiobium sp. R2A62]
Length = 75
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKS P G+ AP+IDYKD RLL R++S+RGKIVPSRI++V K QR LA+A
Sbjct: 1 MATKPFFRRRKSDPFEGENAPKIDYKDTRLLQRYISERGKIVPSRITAVGAKNQRALARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|54026952|ref|YP_121194.1| 30S ribosomal protein S18 [Nocardia farcinica IFM 10152]
gi|59798929|sp|Q5YPR1|RS182_NOCFA RecName: Full=30S ribosomal protein S18 2
gi|54018460|dbj|BAD59830.1| putative ribosomal protein S18 [Nocardia farcinica IFM 10152]
Length = 84
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP+ +R + R K PL G +DYKD+ LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 APSKKVRAEQARRPKKNPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 66 VAVAVKNAREMALLPFTS 83
>gi|331700355|ref|YP_004336594.1| 30S ribosomal protein S18 [Pseudonocardia dioxanivorans CB1190]
gi|326955044|gb|AEA28741.1| 30S ribosomal protein S18 [Pseudonocardia dioxanivorans CB1190]
Length = 78
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+LR+ ++K C A IDYKD LL +F+S RGKI R++ + QR++A
Sbjct: 3 KPVLRKP---KKKVCAFCKDKAQEIDYKDTGLLRKFISDRGKIRARRVTGNCRQHQRDVA 59
Query: 67 KAIKRARYLGLIAYVN 82
A+K +R + L+ Y +
Sbjct: 60 VAVKNSREVALLPYTS 75
>gi|89900979|ref|YP_523450.1| 30S ribosomal protein S18 [Rhodoferax ferrireducens T118]
gi|123397182|sp|Q21WD4|RS18_RHOFD RecName: Full=30S ribosomal protein S18
gi|89345716|gb|ABD69919.1| SSU ribosomal protein S18P [Rhodoferax ferrireducens T118]
Length = 94
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+++ GKI+P+R++ Q
Sbjct: 11 DKRPKRPAQNLLFKRKRFCRFTVTGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIFQ 70
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L ++ Y +
Sbjct: 71 RQLNTAIKRARFLAMLPYSD 90
>gi|319950955|ref|ZP_08024827.1| 30S ribosomal protein S18 [Dietzia cinnamea P4]
gi|319435377|gb|EFV90625.1| 30S ribosomal protein S18 [Dietzia cinnamea P4]
Length = 85
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
A P+ +R R K PL G +DYKD+ L F+S RGKI R++ ++ ++
Sbjct: 4 ARSTPSKKIRAQEGRRPKKNPLKVAGIETVDYKDVNTLRTFISDRGKIRSRRVTGLTPQQ 63
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++A A+K AR + L+ + +
Sbjct: 64 QRQVAVAVKNAREMALLPFTS 84
>gi|62185391|ref|YP_220176.1| 30S ribosomal protein S18 [Chlamydophila abortus S26/3]
gi|81312459|sp|Q5L566|RS18_CHLAB RecName: Full=30S ribosomal protein S18
gi|62148458|emb|CAH64228.1| 30S ribosomal protein S18 [Chlamydophila abortus S26/3]
Length = 87
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 7 TPLLRRNVSHRR--KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P+ +R K CP G IDYKD L +F++++GKI+P RI+ VS + Q
Sbjct: 8 KPVHNNEHRRKRFNKKCPFVSAGWKTIDYKDTETLKKFITEKGKILPRRITGVSSRFQGI 67
Query: 65 LAKAIKRARYLGLIAYVN 82
L AIKRAR++G + +V
Sbjct: 68 LTLAIKRARHIGFLPFVG 85
>gi|260911679|ref|ZP_05918259.1| 30S ribosomal protein S18 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288927613|ref|ZP_06421460.1| ribosomal protein S18 [Prevotella sp. oral taxon 317 str. F0108]
gi|260634227|gb|EEX52337.1| 30S ribosomal protein S18 [Prevotella sp. oral taxon 472 str.
F0295]
gi|288330447|gb|EFC69031.1| ribosomal protein S18 [Prevotella sp. oral taxon 317 str. F0108]
Length = 89
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|192362397|ref|YP_001983436.1| 30S ribosomal protein S18 [Cellvibrio japonicus Ueda107]
gi|229559974|sp|B3PCS1|RS18_CELJU RecName: Full=30S ribosomal protein S18
gi|190688562|gb|ACE86240.1| ribosomal protein S18 [Cellvibrio japonicus Ueda107]
Length = 75
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G RIDYKDI L ++++ GKIVPSRI+ K QR+LA AIKRARYL LI Y +
Sbjct: 14 TAEGTKRIDYKDIETLKAYITETGKIVPSRITGTKAKYQRQLATAIKRARYLALIPYTD 72
>gi|220933166|ref|YP_002510074.1| ribosomal protein S18 [Halothermothrix orenii H 168]
gi|219994476|gb|ACL71079.1| ribosomal protein S18 [Halothermothrix orenii H 168]
Length = 70
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ R K C ++DYK+++ L RFL+ RGKIVP RI+ K QR+L +AIKRAR
Sbjct: 1 MARRNKPCYFCTNKKAKLDYKEVKTLERFLTNRGKIVPRRITGNCAKHQRQLTRAIKRAR 60
Query: 74 YLGLIAYV 81
+ L+ YV
Sbjct: 61 NIALLPYV 68
>gi|317506809|ref|ZP_07964583.1| ribosomal protein S18 [Segniliparus rugosus ATCC BAA-974]
gi|316254883|gb|EFV14179.1| ribosomal protein S18 [Segniliparus rugosus ATCC BAA-974]
Length = 83
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA P LR + K PL +G +DYKD LL F+S+RGKI R++ ++ +
Sbjct: 1 MARKPPVKKLRVAEIRKPKKNPLKAQGVEHVDYKDTNLLRTFISERGKIRSRRVTGLTPR 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + N
Sbjct: 61 QQRDVAVAVKNAREMALLPFTN 82
>gi|150002620|ref|YP_001297364.1| 30S ribosomal protein S18 [Bacteroides vulgatus ATCC 8482]
gi|189462618|ref|ZP_03011403.1| hypothetical protein BACCOP_03310 [Bacteroides coprocola DSM
17136]
gi|198276875|ref|ZP_03209406.1| hypothetical protein BACPLE_03080 [Bacteroides plebeius DSM
17135]
gi|212691069|ref|ZP_03299197.1| hypothetical protein BACDOR_00559 [Bacteroides dorei DSM 17855]
gi|224026732|ref|ZP_03645098.1| hypothetical protein BACCOPRO_03489 [Bacteroides coprophilus DSM
18228]
gi|237712431|ref|ZP_04542912.1| 30S ribosomal protein S18 [Bacteroides sp. 9_1_42FAA]
gi|237726621|ref|ZP_04557102.1| 30S ribosomal protein S18 [Bacteroides sp. D4]
gi|254881416|ref|ZP_05254126.1| 30S ribosomal protein S18 [Bacteroides sp. 4_3_47FAA]
gi|265752133|ref|ZP_06087926.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_33FAA]
gi|294776102|ref|ZP_06741595.1| ribosomal protein S18 [Bacteroides vulgatus PC510]
gi|319642803|ref|ZP_07997441.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_40A]
gi|166220923|sp|A6KWD6|RS18_BACV8 RecName: Full=30S ribosomal protein S18
gi|149931044|gb|ABR37742.1| 30S ribosomal protein S18 [Bacteroides vulgatus ATCC 8482]
gi|189430779|gb|EDU99763.1| hypothetical protein BACCOP_03310 [Bacteroides coprocola DSM
17136]
gi|198270400|gb|EDY94670.1| hypothetical protein BACPLE_03080 [Bacteroides plebeius DSM
17135]
gi|212666301|gb|EEB26873.1| hypothetical protein BACDOR_00559 [Bacteroides dorei DSM 17855]
gi|224019968|gb|EEF77966.1| hypothetical protein BACCOPRO_03489 [Bacteroides coprophilus DSM
18228]
gi|229435147|gb|EEO45224.1| 30S ribosomal protein S18 [Bacteroides dorei 5_1_36/D4]
gi|229453752|gb|EEO59473.1| 30S ribosomal protein S18 [Bacteroides sp. 9_1_42FAA]
gi|254834209|gb|EET14518.1| 30S ribosomal protein S18 [Bacteroides sp. 4_3_47FAA]
gi|263236925|gb|EEZ22395.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_33FAA]
gi|294450053|gb|EFG18560.1| ribosomal protein S18 [Bacteroides vulgatus PC510]
gi|317385547|gb|EFV66488.1| 30S ribosomal protein S18 [Bacteroides sp. 3_1_40A]
Length = 89
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 85
>gi|87303683|ref|ZP_01086458.1| 30S ribosomal protein S18 [Synechococcus sp. WH 5701]
gi|87281788|gb|EAQ73753.1| 30S ribosomal protein S18 [Synechococcus sp. WH 5701]
Length = 73
Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F+++RGKI+P R+S ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGDPIDYKDVDLLKKFITERGKILPRRLSGLTAKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 63 VALLPFVN 70
>gi|160885186|ref|ZP_02066189.1| hypothetical protein BACOVA_03184 [Bacteroides ovatus ATCC 8483]
gi|237714853|ref|ZP_04545334.1| 30S ribosomal protein S18 [Bacteroides sp. D1]
gi|237719993|ref|ZP_04550474.1| 30S ribosomal protein S18 [Bacteroides sp. 2_2_4]
gi|260174162|ref|ZP_05760574.1| 30S ribosomal protein S18 [Bacteroides sp. D2]
gi|262406876|ref|ZP_06083425.1| ribosomal protein S18 [Bacteroides sp. 2_1_22]
gi|294647156|ref|ZP_06724755.1| ribosomal protein S18 [Bacteroides ovatus SD CC 2a]
gi|294809233|ref|ZP_06767949.1| ribosomal protein S18 [Bacteroides xylanisolvens SD CC 1b]
gi|299147873|ref|ZP_07040936.1| ribosomal protein S18 [Bacteroides sp. 3_1_23]
gi|315922427|ref|ZP_07918667.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109536|gb|EDO11281.1| hypothetical protein BACOVA_03184 [Bacteroides ovatus ATCC 8483]
gi|229445178|gb|EEO50969.1| 30S ribosomal protein S18 [Bacteroides sp. D1]
gi|229450545|gb|EEO56336.1| 30S ribosomal protein S18 [Bacteroides sp. 2_2_4]
gi|262355579|gb|EEZ04670.1| ribosomal protein S18 [Bacteroides sp. 2_1_22]
gi|292637443|gb|EFF55862.1| ribosomal protein S18 [Bacteroides ovatus SD CC 2a]
gi|294443627|gb|EFG12378.1| ribosomal protein S18 [Bacteroides xylanisolvens SD CC 1b]
gi|295084750|emb|CBK66273.1| SSU ribosomal protein S18P [Bacteroides xylanisolvens XB1A]
gi|298514056|gb|EFI37942.1| ribosomal protein S18 [Bacteroides sp. 3_1_23]
gi|313696302|gb|EFS33137.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 90
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 SGIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|307946729|ref|ZP_07662064.1| ribosomal protein S18 [Roseibium sp. TrichSKD4]
gi|307770393|gb|EFO29619.1| ribosomal protein S18 [Roseibium sp. TrichSKD4]
Length = 82
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 53/61 (86%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
CP SG +P+IDYKD RLL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR LGL+ +
Sbjct: 20 CPFSGANSPKIDYKDTRLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARLLGLLPF 79
Query: 81 V 81
V
Sbjct: 80 V 80
>gi|15834805|ref|NP_296564.1| 30S ribosomal protein S18 [Chlamydia muridarum Nigg]
gi|270284971|ref|ZP_06194365.1| 30S ribosomal protein S18 [Chlamydia muridarum Nigg]
gi|270288995|ref|ZP_06195297.1| 30S ribosomal protein S18 [Chlamydia muridarum Weiss]
gi|301336368|ref|ZP_07224570.1| 30S ribosomal protein S18 [Chlamydia muridarum MopnTet14]
gi|7404461|sp|P24286|RS18_CHLMU RecName: Full=30S ribosomal protein S18
gi|7190222|gb|AAF39059.1| ribosomal protein S18 [Chlamydia muridarum Nigg]
Length = 81
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR ++ CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 10 RRKRFAKK--CPFVSAGWKTIDYKDVVTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLIAYVN 82
RAR++GL+ +V
Sbjct: 68 RARHVGLLPFVG 79
>gi|124266721|ref|YP_001020725.1| 30S ribosomal protein S18 [Methylibium petroleiphilum PM1]
gi|166220959|sp|A2SG01|RS18_METPP RecName: Full=30S ribosomal protein S18
gi|124259496|gb|ABM94490.1| SSU ribosomal protein S18P [Methylibium petroleiphilum PM1]
Length = 96
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKD+ L F+++ GKI P+R++ Q
Sbjct: 13 DKRPKRNTQSLLFRRKRFCRFTVTGVTEIDYKDVDTLRDFIAENGKITPARLTGTRAFFQ 72
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L+ IKRAR+L L+ Y +
Sbjct: 73 RQLSTCIKRARFLALLPYSD 92
>gi|15605536|ref|NP_220322.1| 30S ribosomal protein S18 [Chlamydia trachomatis D/UW-3/CX]
gi|76789545|ref|YP_328631.1| 30S ribosomal protein S18 [Chlamydia trachomatis A/HAR-13]
gi|166154144|ref|YP_001654262.1| 30S ribosomal protein S18 [Chlamydia trachomatis 434/Bu]
gi|166155019|ref|YP_001653274.1| 30S ribosomal protein S18 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803233|ref|YP_002888427.1| 30S ribosomal protein S18 [Chlamydia trachomatis B/Jali20/OT]
gi|237805154|ref|YP_002889308.1| 30S ribosomal protein S18 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311638|ref|ZP_05354208.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276]
gi|255317939|ref|ZP_05359185.1| 30S ribosomal protein S18 [Chlamydia trachomatis 6276s]
gi|255349202|ref|ZP_05381209.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70]
gi|255503739|ref|ZP_05382129.1| 30S ribosomal protein S18 [Chlamydia trachomatis 70s]
gi|255507420|ref|ZP_05383059.1| 30S ribosomal protein S18 [Chlamydia trachomatis D(s)2923]
gi|301335384|ref|ZP_07223628.1| 30S ribosomal protein S18 [Chlamydia trachomatis L2tet1]
gi|6831541|sp|O84808|RS18_CHLTR RecName: Full=30S ribosomal protein S18
gi|123606576|sp|Q3KKN9|RS18_CHLTA RecName: Full=30S ribosomal protein S18
gi|229559975|sp|B0B929|RS18_CHLT2 RecName: Full=30S ribosomal protein S18
gi|229559976|sp|B0BAQ8|RS18_CHLTB RecName: Full=30S ribosomal protein S18
gi|3329268|gb|AAC68397.1| S18 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76168075|gb|AAX51083.1| SSU ribosomal protein S18P [Chlamydia trachomatis A/HAR-13]
gi|165930132|emb|CAP03616.1| SSU ribosomal protein S18 [Chlamydia trachomatis 434/Bu]
gi|165931007|emb|CAP06570.1| SSU ribosomal protein S18 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273454|emb|CAX10369.1| SSU ribosomal protein S18 [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274467|emb|CAX11262.1| SSU ribosomal protein S18 [Chlamydia trachomatis B/Jali20/OT]
gi|289525847|emb|CBJ15328.1| SSU ribosomal protein S18 [Chlamydia trachomatis Sweden2]
gi|296435429|gb|ADH17607.1| 30S ribosomal protein S18 [Chlamydia trachomatis E/150]
gi|296436353|gb|ADH18527.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/9768]
gi|296437284|gb|ADH19454.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/11222]
gi|296438212|gb|ADH20373.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/11074]
gi|296439146|gb|ADH21299.1| 30S ribosomal protein S18 [Chlamydia trachomatis E/11023]
gi|297140713|gb|ADH97471.1| 30S ribosomal protein S18 [Chlamydia trachomatis G/9301]
gi|297748930|gb|ADI51476.1| SSU ribosomal protein S18P [Chlamydia trachomatis D-EC]
gi|297749810|gb|ADI52488.1| SSU ribosomal protein S18P [Chlamydia trachomatis D-LC]
Length = 81
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR ++ CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 10 RRKRFAKK--CPFVSAGWKTIDYKDVTTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLIAYVN 82
RAR++GL+ +V
Sbjct: 68 RARHVGLLPFVG 79
>gi|171059509|ref|YP_001791858.1| 30S ribosomal protein S18 [Leptothrix cholodnii SP-6]
gi|229560044|sp|B1XXH3|RS18_LEPCP RecName: Full=30S ribosomal protein S18
gi|170776954|gb|ACB35093.1| ribosomal protein S18 [Leptothrix cholodnii SP-6]
Length = 94
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ R++ C + G IDYKD+ +L F+ + GKI P+R++ QR+L AIKRAR
Sbjct: 22 LFKRKRFCRFTVTGVKEIDYKDLDVLRDFVGENGKITPARLTGTRAFFQRQLTTAIKRAR 81
Query: 74 YLGLIAYVN 82
+L L+ Y +
Sbjct: 82 FLALLPYSD 90
>gi|220906338|ref|YP_002481649.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7425]
gi|219862949|gb|ACL43288.1| ribosomal protein S18 [Cyanothece sp. PCC 7425]
Length = 71
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ + IDYKD+ LL RF+++RGKI+P RI+ ++ K+QR+L +++KRAR
Sbjct: 3 FYRRRVSPIKPE--EAIDYKDVDLLRRFITERGKILPRRITGLTAKQQRQLTQSVKRARI 60
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 61 LALLPFIN 68
>gi|213966078|ref|ZP_03394266.1| ribosomal protein S18 [Corynebacterium amycolatum SK46]
gi|213951276|gb|EEB62670.1| ribosomal protein S18 [Corynebacterium amycolatum SK46]
Length = 83
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M R S R K PL G ++DYKDI LL +F+S RGKI R++ ++ +
Sbjct: 1 MKRNHSNKKARMEQSRRPKKNPLKAAGVEKVDYKDINLLRQFISDRGKIRSRRVTGLTPQ 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + +
Sbjct: 61 QQRQVATAVKNAREMALLPFTS 82
>gi|282880329|ref|ZP_06289043.1| ribosomal protein S18 [Prevotella timonensis CRIS 5C-B1]
gi|281305831|gb|EFA97877.1| ribosomal protein S18 [Prevotella timonensis CRIS 5C-B1]
Length = 89
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|294673370|ref|YP_003573986.1| 30S ribosomal protein S18 [Prevotella ruminicola 23]
gi|294473390|gb|ADE82779.1| ribosomal protein S18 [Prevotella ruminicola 23]
Length = 88
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 28 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 84
>gi|225848304|ref|YP_002728467.1| ribosomal protein S18 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644141|gb|ACN99191.1| ribosomal protein S18 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 76
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R+K C + +YKD+ +L F+S+RG+I+P RIS K QR+L+ IK+AR
Sbjct: 8 FQKRKKYCKFCAEKKEP-NYKDVEMLKEFISERGRIIPRRISGTCAKHQRKLSVEIKKAR 66
Query: 74 YLGLIAYV 81
L LI YV
Sbjct: 67 QLALIPYV 74
>gi|288801223|ref|ZP_06406678.1| ribosomal protein S18 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331834|gb|EFC70317.1| ribosomal protein S18 [Prevotella sp. oral taxon 299 str. F0039]
Length = 89
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRVAQAVKRARQIALLPYVT 85
>gi|258655464|ref|YP_003204620.1| 30S ribosomal protein S18 [Nakamurella multipartita DSM 44233]
gi|258558689|gb|ACV81631.1| ribosomal protein S18 [Nakamurella multipartita DSM 44233]
Length = 78
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + A IDYKD LL RF+S RGKI R++ + QR++A A+K AR + L+
Sbjct: 13 VCAFCKENAQPIDYKDTTLLRRFISDRGKIRARRVTGNCTQHQRDIATAVKNAREVALLP 72
Query: 80 YVN 82
Y +
Sbjct: 73 YTS 75
>gi|254438780|ref|ZP_05052274.1| ribosomal protein S18 [Octadecabacter antarcticus 307]
gi|198254226|gb|EDY78540.1| ribosomal protein S18 [Octadecabacter antarcticus 307]
Length = 75
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKS P G AP+IDYKD R L R++S+RGKIVPSRI++V K QR LA+A
Sbjct: 1 MATKPFFRRRKSDPFDGDNAPKIDYKDTRTLQRYVSERGKIVPSRITAVGAKNQRALARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|59712918|ref|YP_205694.1| 30S ribosomal protein S18 [Vibrio fischeri ES114]
gi|197335451|ref|YP_002157106.1| ribosomal protein S18 [Vibrio fischeri MJ11]
gi|209696170|ref|YP_002264100.1| 30S ribosomal protein S18 [Aliivibrio salmonicida LFI1238]
gi|75506909|sp|Q5E2E0|RS18_VIBF1 RecName: Full=30S ribosomal protein S18
gi|229470510|sp|B6EMP4|RS18_ALISL RecName: Full=30S ribosomal protein S18
gi|229560080|sp|B5FBQ1|RS18_VIBFM RecName: Full=30S ribosomal protein S18
gi|59481019|gb|AAW86806.1| 30S ribosomal subunit protein S18 [Vibrio fischeri ES114]
gi|197316941|gb|ACH66388.1| ribosomal protein S18 [Vibrio fischeri MJ11]
gi|208010123|emb|CAQ80448.1| 30S ribosomal subunit protein S18 [Aliivibrio salmonicida
LFI1238]
Length = 75
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|296393674|ref|YP_003658558.1| 30S ribosomal protein S18 [Segniliparus rotundus DSM 44985]
gi|296180821|gb|ADG97727.1| ribosomal protein S18 [Segniliparus rotundus DSM 44985]
Length = 83
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA P LR + K PL +G ++DYKD LL F+S+RGKI R++ ++ +
Sbjct: 1 MARKPPVKKLRVAEIRKPKKNPLKAQGVEQVDYKDTNLLRTFISERGKIRSRRVTGLTPR 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + N
Sbjct: 61 QQRDVATAVKNAREMALLPFTN 82
>gi|29347572|ref|NP_811075.1| 30S ribosomal protein S18 [Bacteroides thetaiotaomicron VPI-5482]
gi|253572032|ref|ZP_04849436.1| 30S ribosomal protein S18 [Bacteroides sp. 1_1_6]
gi|298383735|ref|ZP_06993296.1| ribosomal protein S18 [Bacteroides sp. 1_1_14]
gi|59798897|sp|Q8A5S6|RS18_BACTN RecName: Full=30S ribosomal protein S18
gi|29339473|gb|AAO77269.1| 30S ribosomal protein S18 [Bacteroides thetaiotaomicron VPI-5482]
gi|251838212|gb|EES66299.1| 30S ribosomal protein S18 [Bacteroides sp. 1_1_6]
gi|298263339|gb|EFI06202.1| ribosomal protein S18 [Bacteroides sp. 1_1_14]
Length = 90
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ YV
Sbjct: 30 SGIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPYVT 86
>gi|295837785|ref|ZP_06824718.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|302520485|ref|ZP_07272827.1| ribosomal protein S18 [Streptomyces sp. SPB78]
gi|318058998|ref|ZP_07977721.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actG]
gi|318075524|ref|ZP_07982856.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actF]
gi|197698943|gb|EDY45876.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|302429380|gb|EFL01196.1| ribosomal protein S18 [Streptomyces sp. SPB78]
Length = 78
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +++S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKVTYVDYKDTNMLRKYISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|282860311|ref|ZP_06269380.1| ribosomal protein S18 [Prevotella bivia JCVIHMP010]
gi|282586908|gb|EFB92144.1| ribosomal protein S18 [Prevotella bivia JCVIHMP010]
Length = 89
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|255011271|ref|ZP_05283397.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
gi|313149083|ref|ZP_07811276.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
gi|313137850|gb|EFR55210.1| 30S ribosomal protein S18 [Bacteroides fragilis 3_1_12]
Length = 90
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR+L L+ +V
Sbjct: 30 SGIRYIDYKDPEFLKKFLNEQGKILPRRITGTSLKFQRRIAQAVKRARHLALLPFVT 86
>gi|89075972|ref|ZP_01162344.1| 30S ribosomal protein S18 [Photobacterium sp. SKA34]
gi|90581364|ref|ZP_01237160.1| 30S ribosomal protein S18 [Vibrio angustum S14]
gi|262275142|ref|ZP_06052953.1| SSU ribosomal protein S18p [Grimontia hollisae CIP 101886]
gi|269103597|ref|ZP_06156294.1| SSU ribosomal protein S18p [Photobacterium damselae subsp.
damselae CIP 102761]
gi|330445015|ref|ZP_08308669.1| ribosomal protein S18 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|89048321|gb|EAR53900.1| 30S ribosomal protein S18 [Photobacterium sp. SKA34]
gi|90437474|gb|EAS62669.1| 30S ribosomal protein S18 [Vibrio angustum S14]
gi|262221705|gb|EEY73019.1| SSU ribosomal protein S18p [Grimontia hollisae CIP 101886]
gi|268163495|gb|EEZ41991.1| SSU ribosomal protein S18p [Photobacterium damselae subsp.
damselae CIP 102761]
gi|328493133|dbj|GAA03166.1| ribosomal protein S18 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 75
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|254454485|ref|ZP_05067922.1| ribosomal protein S18 [Octadecabacter antarcticus 238]
gi|198268891|gb|EDY93161.1| ribosomal protein S18 [Octadecabacter antarcticus 238]
Length = 75
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKS P G AP+IDYKD R L R++S+RGKIVPSRI++V K QR LA+A
Sbjct: 1 MATKPFFRRRKSDPFEGDNAPKIDYKDTRTLQRYVSERGKIVPSRITAVGAKNQRALARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|260219660|emb|CBA26505.1| 30S ribosomal protein S18 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 93
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTVTGVEEIDYKDIDTLRDFIAENGKIIPARLTGTRAIFQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R+L AIKRAR+L ++ Y +
Sbjct: 70 RQLNTAIKRARFLAMLPYSD 89
>gi|126735966|ref|ZP_01751710.1| ribosomal protein S18 [Roseobacter sp. CCS2]
gi|126714523|gb|EBA11390.1| ribosomal protein S18 [Roseobacter sp. CCS2]
Length = 75
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKS P G AP+IDYKD RLL R++S+RGKIVP+RI++V K QR LA+A
Sbjct: 1 MATKPFFRRRKSDPFEGDNAPKIDYKDTRLLQRYISERGKIVPARITAVGAKNQRALARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|33863012|ref|NP_894572.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9313]
gi|124023182|ref|YP_001017489.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9303]
gi|59798838|sp|Q7TUZ8|RS18_PROMM RecName: Full=30S ribosomal protein S18
gi|166220972|sp|A2C9R4|RS18_PROM3 RecName: Full=30S ribosomal protein S18
gi|33634929|emb|CAE20915.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9313]
gi|123963468|gb|ABM78224.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9303]
Length = 73
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F++ RGKI+P R++ ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGDPIDYKDVDLLKKFITDRGKILPRRLTGLTSKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 63 IALLPFVN 70
>gi|68171814|ref|ZP_00545152.1| Ribosomal protein S18 [Ehrlichia chaffeensis str. Sapulpa]
gi|88657819|ref|YP_507130.1| 30S ribosomal protein S18 [Ehrlichia chaffeensis str. Arkansas]
gi|123722798|sp|Q2GHF3|RS18_EHRCR RecName: Full=30S ribosomal protein S18
gi|67998763|gb|EAM85477.1| Ribosomal protein S18 [Ehrlichia chaffeensis str. Sapulpa]
gi|88599276|gb|ABD44745.1| putative ribosomal protein S18 [Ehrlichia chaffeensis str.
Arkansas]
Length = 95
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +K
Sbjct: 16 TAYSPLAYLKRPYFKRSKACPLEQCPNEDIDYKNKGLLSKFTSEYGRILPSRITSVSSRK 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L+ A+KRARYL L+ Y
Sbjct: 76 QRLLSTAVKRARYLALLPYC 95
>gi|111114935|ref|YP_709553.1| 30S ribosomal protein S18 [Borrelia afzelii PKo]
gi|216263818|ref|ZP_03435812.1| ribosomal protein S18 [Borrelia afzelii ACA-1]
gi|123047064|sp|Q0SP51|RS18_BORAP RecName: Full=30S ribosomal protein S18
gi|110890209|gb|ABH01377.1| ribosomal protein S18 [Borrelia afzelii PKo]
gi|215979862|gb|EEC20684.1| ribosomal protein S18 [Borrelia afzelii ACA-1]
Length = 96
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+RKSC DYK+ L +F++++GKI+P RI+ S K QR LA IKRAR
Sbjct: 28 RFFKRKSCKFC-DSGKHPDYKEFDFLKKFITEQGKILPKRITGTSAKHQRRLALEIKRAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|282877913|ref|ZP_06286722.1| ribosomal protein S18 [Prevotella buccalis ATCC 35310]
gi|281299914|gb|EFA92274.1| ribosomal protein S18 [Prevotella buccalis ATCC 35310]
Length = 90
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|116074877|ref|ZP_01472138.1| 30S ribosomal protein S18 [Synechococcus sp. RS9916]
gi|116068099|gb|EAU73852.1| 30S ribosomal protein S18 [Synechococcus sp. RS9916]
Length = 73
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+++ P+ IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR
Sbjct: 5 FFKKRLSPIK--PGDPIDYKDVDLLKKFITERGKILPRRLTGLTAKQQRDLTNAVKRARI 62
Query: 75 LGLIAYVN 82
+ ++ +VN
Sbjct: 63 VAMLPFVN 70
>gi|226942913|ref|YP_002797986.1| 30S ribosomal protein S18 [Azotobacter vinelandii DJ]
gi|259494801|sp|C1DLR3|RS18_AZOVD RecName: Full=30S ribosomal protein S18
gi|226717840|gb|ACO77011.1| 30S ribosomal protein S18 [Azotobacter vinelandii DJ]
Length = 76
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRARYL L+ Y +
Sbjct: 14 TAEGVKEIDFKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARYLALLPYTD 72
>gi|217076742|ref|YP_002334458.1| ribosomal protein S18 [Thermosipho africanus TCF52B]
gi|217036595|gb|ACJ75117.1| ribosomal protein S18 [Thermosipho africanus TCF52B]
Length = 74
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + K C L +DYKDI+LL FL+++ KI+P RI+ K QR + AI
Sbjct: 1 MKYRKKRKPKVCKLCQSKVEYVDYKDIKLLREFLTEKEKIIPRRITGNCAKHQRMVKIAI 60
Query: 70 KRARYLGLIAYV 81
KRAR + L+ YV
Sbjct: 61 KRARQMALLPYV 72
>gi|114797845|ref|YP_760859.1| 30S ribosomal protein S18 [Hyphomonas neptunium ATCC 15444]
gi|123323135|sp|Q0C084|RS18_HYPNA RecName: Full=30S ribosomal protein S18
gi|114738019|gb|ABI76144.1| ribosomal protein S18 [Hyphomonas neptunium ATCC 15444]
Length = 85
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 39/70 (55%), Positives = 54/70 (77%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR RRK P +G+ A IDYKD+++L R++S++GKIVPSRI++V+ K QR+LA+AIK
Sbjct: 13 RRPFGRRRKVDPFTGQHAQEIDYKDVKMLQRYISEKGKIVPSRITAVNLKNQRKLAQAIK 72
Query: 71 RARYLGLIAY 80
RAR L LI +
Sbjct: 73 RARMLALIPF 82
>gi|303326563|ref|ZP_07357006.1| ribosomal protein S18 [Desulfovibrio sp. 3_1_syn3]
gi|302864479|gb|EFL87410.1| ribosomal protein S18 [Desulfovibrio sp. 3_1_syn3]
Length = 87
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKELPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|298493170|ref|YP_003723347.1| 30S ribosomal protein S18 ['Nostoc azollae' 0708]
gi|298235088|gb|ADI66224.1| ribosomal protein S18 ['Nostoc azollae' 0708]
Length = 71
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QREL AIKRAR
Sbjct: 3 YYRRRLSPIK--PGEPIDYKDVDLLRKFITERGKILPRRITGLTSQQQRELTLAIKRARI 60
Query: 75 LGLIAYVN 82
+ L+ ++N
Sbjct: 61 VALLPFIN 68
>gi|91788895|ref|YP_549847.1| 30S ribosomal protein S18 [Polaromonas sp. JS666]
gi|123059688|sp|Q128U3|RS18_POLSJ RecName: Full=30S ribosomal protein S18
gi|91698120|gb|ABE44949.1| SSU ribosomal protein S18P [Polaromonas sp. JS666]
Length = 94
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + + R++ C + G IDYKDI L F+++ GKI+P+R++ Q
Sbjct: 10 DKRPKRNTQSLLFKRKRFCRFTAAGVEEIDYKDIDTLRDFVAENGKIIPARLTGTRAIFQ 69
Query: 63 RELAKAIKRARYLGLIAYVN 82
R++ A+KRAR+L ++ Y +
Sbjct: 70 RQINTAVKRARFLAMLPYSD 89
>gi|312138605|ref|YP_004005941.1| 30S ribosomal protein s18 rpsr [Rhodococcus equi 103S]
gi|325676329|ref|ZP_08156008.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
gi|311887944|emb|CBH47256.1| 30S ribosomal protein S18 RpsR [Rhodococcus equi 103S]
gi|325552890|gb|EGD22573.1| 30S ribosomal protein S18 [Rhodococcus equi ATCC 33707]
Length = 84
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P+ R R K PL G +DYKD+ LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 SPSRKSRGEQGRRPKKNPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 66 VAVAVKNAREMALLPFTS 83
>gi|223039715|ref|ZP_03610001.1| ribosomal protein S18 [Campylobacter rectus RM3267]
gi|222879098|gb|EEF14193.1| ribosomal protein S18 [Campylobacter rectus RM3267]
Length = 86
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MAEKRKYSRKYCKFTEAKIEFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI YV
Sbjct: 61 KRARQAALIPYV 72
>gi|284993409|ref|YP_003411964.1| 30S ribosomal protein S18 [Geodermatophilus obscurus DSM 43160]
gi|284066655|gb|ADB77593.1| ribosomal protein S18 [Geodermatophilus obscurus DSM 43160]
Length = 78
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C A IDYKD LL +F+S RGKI R+S + QR++A A+K +R + L+ Y
Sbjct: 14 CQFCKDKATYIDYKDTTLLRKFISDRGKIRARRVSGNCSQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|13358116|ref|NP_078390.1| ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971294|ref|ZP_02553571.1| ribosomal protein S18 [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168281884|ref|ZP_02689551.1| ribosomal protein S18 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308033|ref|ZP_02690708.1| ribosomal protein S18 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762263|ref|YP_001752636.1| 30S ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|11387108|sp|Q9PPT8|RS18_UREPA RecName: Full=30S ribosomal protein S18
gi|189029695|sp|B1AJJ2|RS18_UREP2 RecName: Full=30S ribosomal protein S18
gi|11357040|pir||A82875 ribosomal protein S18 UU552 [imported] - Ureaplasma urealyticum
gi|6899558|gb|AAF30965.1|AE002154_1 ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827840|gb|ACA33102.1| ribosomal protein S18 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902461|gb|EDT48750.1| ribosomal protein S18 [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675876|gb|EDT87781.1| ribosomal protein S18 [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700896|gb|EDU19178.1| ribosomal protein S18 [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 79
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RN R+K C LS KG +DYKD+ LL RF++ KI R++ S + QR +A AIK
Sbjct: 7 NRNRKPRKKVCILSAKGIEHVDYKDVELLQRFINNNNKIASRRVTGASARMQRRIANAIK 66
Query: 71 RARYLGLIAYV 81
RAR++GL+ YV
Sbjct: 67 RARFVGLLPYV 77
>gi|42520621|ref|NP_966536.1| 30S ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58698590|ref|ZP_00373488.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99034686|ref|ZP_01314626.1| hypothetical protein Wendoof_01000557 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630395|ref|YP_002727186.1| ribosomal protein S18 [Wolbachia sp. wRi]
gi|59798787|sp|Q73GZ6|RS18_WOLPM RecName: Full=30S ribosomal protein S18
gi|254812966|sp|C0R3A3|RS18_WOLWR RecName: Full=30S ribosomal protein S18
gi|42410360|gb|AAS14470.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58534886|gb|EAL58987.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592376|gb|ACN95395.1| ribosomal protein S18 [Wolbachia sp. wRi]
Length = 91
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R K CPL+ IDYK+I LL++F S G+I+P R++ V KKQR+L AI
Sbjct: 17 NRTGFRRSKVCPLAASKDEDIDYKNIDLLSKFTSDYGRILPRRLTGVCAKKQRKLRLAII 76
Query: 71 RARYLGLIAYVN 82
RAR+L LI Y
Sbjct: 77 RARFLALIPYCT 88
>gi|255321378|ref|ZP_05362538.1| ribosomal protein S18 [Campylobacter showae RM3277]
gi|255301531|gb|EET80788.1| ribosomal protein S18 [Campylobacter showae RM3277]
Length = 86
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MAEKRKYSRKYCKFTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI YV
Sbjct: 61 KRARQAALIPYV 72
>gi|212704876|ref|ZP_03313004.1| hypothetical protein DESPIG_02943 [Desulfovibrio piger ATCC
29098]
gi|212671718|gb|EEB32201.1| hypothetical protein DESPIG_02943 [Desulfovibrio piger ATCC
29098]
Length = 87
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ + RRK C ++YK +L F+++RGKI+ RI+ QR L + I
Sbjct: 3 FKKKFAPRRKFCRFCADKDLPLNYKRPDILRDFITERGKIIARRITGTCAHHQRLLTREI 62
Query: 70 KRARYLGLIAYV 81
KRAR + L+ Y
Sbjct: 63 KRARQMALLIYT 74
>gi|51473301|ref|YP_067058.1| 30S ribosomal protein S18 [Rickettsia typhi str. Wilmington]
gi|59798674|sp|Q68XR6|RS18_RICTY RecName: Full=30S ribosomal protein S18
gi|51459613|gb|AAU03576.1| 30S ribosomal protein S18 [Rickettsia typhi str. Wilmington]
Length = 95
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|256425943|ref|YP_003126596.1| ribosomal protein S18 [Chitinophaga pinensis DSM 2588]
gi|256040851|gb|ACU64395.1| ribosomal protein S18 [Chitinophaga pinensis DSM 2588]
Length = 88
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ +K C G +DYKD L +FL+ +GK++P RIS S K QR++A+AIK+
Sbjct: 14 KTEKRAKKYCRFKKLGIRYVDYKDAEFLKKFLNDQGKMLPRRISGNSLKFQRKVAQAIKK 73
Query: 72 ARYLGLIAYVN 82
AR + L+ YV
Sbjct: 74 ARQMALLPYVT 84
>gi|145652240|gb|ABP88170.1| hypothetical protein [Borrelia lonestari]
Length = 124
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 14 VSHRRKSCPLSGKGAPRI-DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
++K+C ++ DYKD L +F++ +GKI+P RI+ S K QR LA IK+A
Sbjct: 56 RFFKKKTCKFC--DIDKVPDYKDFDFLKKFITDQGKILPRRITGTSAKHQRCLALEIKKA 113
Query: 73 RYLGLIAYV 81
RY+ L+ +V
Sbjct: 114 RYMALLPFV 122
>gi|157803227|ref|YP_001491776.1| 30S ribosomal protein S18 [Rickettsia canadensis str. McKiel]
gi|166220984|sp|A8EXA8|RS18_RICCK RecName: Full=30S ribosomal protein S18
gi|157784490|gb|ABV72991.1| 30S ribosomal protein S18 [Rickettsia canadensis str. McKiel]
Length = 95
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|67458534|ref|YP_246158.1| 30S ribosomal protein S18 [Rickettsia felis URRWXCal2]
gi|75536999|sp|Q4UN65|RS18_RICFE RecName: Full=30S ribosomal protein S18
gi|67004067|gb|AAY60993.1| 30S ribosomal protein S18 [Rickettsia felis URRWXCal2]
Length = 95
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 21 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|197294287|ref|YP_001798828.1| 30S ribosomal protein S18 [Candidatus Phytoplasma australiense]
gi|171853614|emb|CAM11485.1| 30S ribosomal protein S18 [Candidatus Phytoplasma australiense]
Length = 78
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R RRK C + +ID+KDI LL +F+++RGKI+ RI++ S K QR+LA AIK
Sbjct: 6 RHVFKKRRKVCYFTENKFSKIDFKDIELLKKFITERGKIISRRITNTSAKWQRQLAVAIK 65
Query: 71 RARYLGLIAYV 81
RAR++ LI+++
Sbjct: 66 RARHMALISFI 76
>gi|146340285|ref|YP_001205333.1| 30S ribosomal protein S18 [Bradyrhizobium sp. ORS278]
gi|148255212|ref|YP_001239797.1| 30S ribosomal protein S18 [Bradyrhizobium sp. BTAi1]
gi|166220926|sp|A5EI97|RS18_BRASB RecName: Full=30S ribosomal protein S18
gi|166220927|sp|A4YT76|RS18_BRASO RecName: Full=30S ribosomal protein S18
gi|146193091|emb|CAL77102.1| 30S ribosomal subunit protein S18 [Bradyrhizobium sp. ORS278]
gi|146407385|gb|ABQ35891.1| SSU ribosomal protein S18P [Bradyrhizobium sp. BTAi1]
Length = 79
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+CP SG AP+IDYKD +LL R++S+RGKIVPSRI++VS KKQRELA+AIKRAR+LGL+
Sbjct: 15 KTCPFSGPNAPKIDYKDSKLLMRYVSERGKIVPSRITAVSAKKQRELARAIKRARFLGLL 74
Query: 79 AYV 81
YV
Sbjct: 75 PYV 77
>gi|182437465|ref|YP_001825184.1| 30S ribosomal protein S18 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|239942699|ref|ZP_04694636.1| 30S ribosomal protein S18 [Streptomyces roseosporus NRRL 15998]
gi|239989158|ref|ZP_04709822.1| 30S ribosomal protein S18 [Streptomyces roseosporus NRRL 11379]
gi|282863347|ref|ZP_06272406.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|291446163|ref|ZP_06585553.1| 30S ribosomal protein S18 1 [Streptomyces roseosporus NRRL 15998]
gi|326778120|ref|ZP_08237385.1| 30S ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
gi|205556703|sp|B1VPC2|RS182_STRGG RecName: Full=30S ribosomal protein S18 2
gi|178465981|dbj|BAG20501.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|282561682|gb|EFB67225.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|291349110|gb|EFE76014.1| 30S ribosomal protein S18 1 [Streptomyces roseosporus NRRL 15998]
gi|320009722|gb|ADW04572.1| ribosomal protein S18 [Streptomyces flavogriseus ATCC 33331]
gi|326658453|gb|EGE43299.1| 30S ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
Length = 78
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTQYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|237809238|ref|YP_002893678.1| 30S ribosomal protein S18 [Tolumonas auensis DSM 9187]
gi|259494821|sp|C4LAB7|RS18_TOLAT RecName: Full=30S ribosomal protein S18
gi|237501499|gb|ACQ94092.1| ribosomal protein S18 [Tolumonas auensis DSM 9187]
Length = 76
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + IDYKD L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +L
Sbjct: 14 TAERVTEIDYKDTVTLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLALLPYTDL 73
>gi|167973255|ref|ZP_02555532.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|167974085|ref|ZP_02556362.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975519|ref|ZP_02557796.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167988271|ref|ZP_02569942.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|168362598|ref|ZP_02695777.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|195867992|ref|ZP_03079988.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273409|ref|ZP_03205945.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554606|ref|YP_002284999.1| 30S ribosomal protein S18 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550837|ref|ZP_03771786.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551101|ref|ZP_03772047.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|229560079|sp|B5ZC59|RS18_UREU1 RecName: Full=30S ribosomal protein S18
gi|171903293|gb|EDT49582.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184209001|gb|EDU06044.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188019112|gb|EDU57152.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188998109|gb|EDU67206.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659849|gb|EDX53229.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660326|gb|EDX53587.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249929|gb|EDY74709.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209542107|gb|ACI60336.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378916|gb|EEH01281.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379991|gb|EEH02353.1| ribosomal protein S18 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 79
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RN R+K C LS KG +DYKD+ LL RF++ KI R++ S + QR +A AIK
Sbjct: 7 NRNRKPRKKVCILSAKGIEHVDYKDVELLQRFINNNNKIASRRVTGASARMQRRIANAIK 66
Query: 71 RARYLGLIAYV 81
RAR++GL+ YV
Sbjct: 67 RARFVGLLPYV 77
>gi|149907734|ref|ZP_01896481.1| 30S ribosomal protein S18 [Moritella sp. PE36]
gi|149809404|gb|EDM69333.1| 30S ribosomal protein S18 [Moritella sp. PE36]
Length = 75
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ +G IDYKDI L ++++ GKIVPSRI+ K QR+L +AIKRARYL L+ Y +L
Sbjct: 14 TSEGVTEIDYKDIATLKNYVTESGKIVPSRITGTRAKYQRQLGRAIKRARYLSLLPYTDL 73
>gi|261880412|ref|ZP_06006839.1| 30S ribosomal protein S18 [Prevotella bergensis DSM 17361]
gi|270332881|gb|EFA43667.1| 30S ribosomal protein S18 [Prevotella bergensis DSM 17361]
Length = 90
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 86
>gi|154249360|ref|YP_001410185.1| 30S ribosomal protein S18 [Fervidobacterium nodosum Rt17-B1]
gi|254811617|sp|A7HKU5|RS18_FERNB RecName: Full=30S ribosomal protein S18
gi|154153296|gb|ABS60528.1| ribosomal protein S18 [Fervidobacterium nodosum Rt17-B1]
Length = 76
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + K+C + +DYKDIR+L FL+++GKI+P R++ K QR + AIKR
Sbjct: 5 RQRRRKVKACKMCEMNVEYVDYKDIRILKDFLNEKGKILPRRLTGNCAKHQRMVKIAIKR 64
Query: 72 ARYLGLIAYV 81
AR + L+ Y+
Sbjct: 65 ARQMALLPYI 74
>gi|281420810|ref|ZP_06251809.1| ribosomal protein S18 [Prevotella copri DSM 18205]
gi|281405102|gb|EFB35782.1| ribosomal protein S18 [Prevotella copri DSM 18205]
Length = 89
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|254391458|ref|ZP_05006660.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|294813711|ref|ZP_06772354.1| 30S ribosomal protein S18 2 [Streptomyces clavuligerus ATCC
27064]
gi|326442133|ref|ZP_08216867.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|197705147|gb|EDY50959.1| 30S ribosomal protein S18 [Streptomyces clavuligerus ATCC 27064]
gi|294326310|gb|EFG07953.1| 30S ribosomal protein S18 2 [Streptomyces clavuligerus ATCC
27064]
Length = 78
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTVYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|325989379|ref|YP_004249078.1| 30S ribosomal protein S18 [Mycoplasma suis KI3806]
gi|323574464|emb|CBZ40114.1| 30S ribosomal protein S18 [Mycoplasma suis]
Length = 124
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
V + R +K C L +G IDYKD L +L + K++ +IS K
Sbjct: 43 TRVGDSGQRTRKNKKFKKVCWLCRRGVLTIDYKDTEFLKNYLKRYNKVLIHKISGNCLKH 102
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q +L++AIKRARY+ L+ +V
Sbjct: 103 QHQLSQAIKRARYIALLPFV 122
>gi|289770861|ref|ZP_06530239.1| 30S ribosomal protein S18 2 [Streptomyces lividans TK24]
gi|289701060|gb|EFD68489.1| 30S ribosomal protein S18 2 [Streptomyces lividans TK24]
Length = 105
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
++ P P R++ PL G +DYKD LL +F+S RGKI R++ V+ ++
Sbjct: 24 SDPMPRPRKADRTPARQRPNPLDRDGVTYVDYKDTELLRKFVSDRGKIRSRRVTRVTSQQ 83
Query: 62 QRELAKAIKRARYLGLIAY 80
QR+LA+AIK AR + L+ Y
Sbjct: 84 QRQLARAIKNAREMALLPY 102
>gi|83816823|ref|YP_445490.1| ribosomal protein S18 [Salinibacter ruber DSM 13855]
gi|294507376|ref|YP_003571434.1| 30S ribosomal protein S18 [Salinibacter ruber M8]
gi|123726178|sp|Q2S2U1|RS18_SALRD RecName: Full=30S ribosomal protein S18
gi|83758217|gb|ABC46330.1| ribosomal protein S18 [Salinibacter ruber DSM 13855]
gi|294343704|emb|CBH24482.1| 30S ribosomal protein S18 [Salinibacter ruber M8]
Length = 70
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +DYKD L +F++ +GKI+P R++ V + QR++ KAIKRAR+L L+ YV+
Sbjct: 10 EHLEYVDYKDTEFLEQFINNQGKILPRRVTGVPARVQRQITKAIKRARHLALMPYVS 66
>gi|56750435|ref|YP_171136.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 6301]
gi|81299932|ref|YP_400140.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 7942]
gi|81676949|sp|Q5N503|RS18_SYNP6 RecName: Full=30S ribosomal protein S18
gi|123769262|sp|Q31P66|RS18_SYNE7 RecName: Full=30S ribosomal protein S18
gi|56685394|dbj|BAD78616.1| 30S ribosomal protein S18 [Synechococcus elongatus PCC 6301]
gi|81168813|gb|ABB57153.1| SSU ribosomal protein S18P [Synechococcus elongatus PCC 7942]
Length = 71
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+LA AIKRAR
Sbjct: 3 YFRRRLSPIKPS--DPIDYKDVDLLRKFITERGKILPRRITGLTARQQRDLAVAIKRARI 60
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 61 LALLPFLN 68
>gi|269114888|ref|YP_003302651.1| 30S ribosomal protein S18 [Mycoplasma hominis]
gi|268322513|emb|CAX37248.1| 30S ribosomal protein S18 [Mycoplasma hominis ATCC 23114]
Length = 99
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 9 LLRRNVSHRRKSCPLS--GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++R+ R++ C + IDYK+ +L++ ++ +GKI+ SRI+ K QR +A
Sbjct: 4 IVRKKPFIRKRPCQFCLSKEPVVYIDYKNEEVLSKLVNLQGKILSSRITGTCAKHQRAVA 63
Query: 67 KAIKRARYLGLIAYVNL 83
AIKRAR++G++ Y+ L
Sbjct: 64 LAIKRARFVGILPYIGL 80
>gi|296141832|ref|YP_003649075.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
gi|296029966|gb|ADG80736.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
Length = 85
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA +R + + K+C + +IDYKD LL RFLS+RGKI R++ +
Sbjct: 1 MAGKGNGRKVRVEKAVKAKACTFCKEKNIKIDYKDTTLLRRFLSERGKIRSRRVTGNCVQ 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR++A A+K +R + L+ + +
Sbjct: 61 HQRDVAIAVKNSREVALLPFTS 82
>gi|124112116|ref|YP_001019134.1| ribosomal protein S18 [Chlorokybus atmophyticus]
gi|205831445|sp|Q19V75|RR18_CHLAT RecName: Full=30S ribosomal protein S18, chloroplastic
gi|124012224|gb|ABD62248.2| ribosomal protein S18 [Chlorokybus atmophyticus]
Length = 71
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ P+ IDYK+I LL++F++++GKI+P R++ +S K+QR + KAIK+AR+L
Sbjct: 5 RRRVSPIK--PGETIDYKNIDLLSQFITEQGKILPRRVNGISAKQQRAITKAIKQARFLA 62
Query: 77 LIAYVN 82
L+ ++N
Sbjct: 63 LLPFLN 68
>gi|325270188|ref|ZP_08136795.1| 30S ribosomal protein S18 [Prevotella multiformis DSM 16608]
gi|324987489|gb|EGC19465.1| 30S ribosomal protein S18 [Prevotella multiformis DSM 16608]
Length = 89
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+AIKRAR + L+ YV
Sbjct: 29 SGIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAIKRARQIALLPYVT 85
>gi|254384805|ref|ZP_05000142.1| 30S ribosomal protein S18 [Streptomyces sp. Mg1]
gi|297193324|ref|ZP_06910722.1| 30S ribosomal protein S18 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|302535601|ref|ZP_07287943.1| ribosomal protein S18 [Streptomyces sp. C]
gi|194343687|gb|EDX24653.1| 30S ribosomal protein S18 [Streptomyces sp. Mg1]
gi|197718358|gb|EDY62266.1| 30S ribosomal protein S18 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|302444496|gb|EFL16312.1| ribosomal protein S18 [Streptomyces sp. C]
gi|328883731|emb|CCA56970.1| SSU ribosomal protein S18p [Streptomyces venezuelae ATCC 10712]
Length = 78
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYKD +L +F+S RGKI R++ + QR++A A+K +R + L+ Y
Sbjct: 14 CAFCKDKTAYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 TS 75
>gi|225677181|ref|ZP_03788177.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590768|gb|EEH11999.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 91
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K CPL+ +DYK+I LL++F S G+I+P R++ V KKQR+L AI
Sbjct: 17 NRTGSRRSKVCPLAASKDEDVDYKNIDLLSKFTSDYGRILPRRLTGVCAKKQRKLRLAII 76
Query: 71 RARYLGLIAYVN 82
RAR+L LI Y
Sbjct: 77 RARFLALIPYCT 88
>gi|77163756|ref|YP_342281.1| ribosomal protein S18 [Nitrosococcus oceani ATCC 19707]
gi|254435623|ref|ZP_05049130.1| ribosomal protein S18 [Nitrosococcus oceani AFC27]
gi|300115387|ref|YP_003761962.1| 30S ribosomal protein S18 [Nitrosococcus watsonii C-113]
gi|123595160|sp|Q3JEJ5|RS18_NITOC RecName: Full=30S ribosomal protein S18
gi|76882070|gb|ABA56751.1| SSU ribosomal protein S18P [Nitrosococcus oceani ATCC 19707]
gi|207088734|gb|EDZ66006.1| ribosomal protein S18 [Nitrosococcus oceani AFC27]
gi|299541324|gb|ADJ29641.1| ribosomal protein S18 [Nitrosococcus watsonii C-113]
Length = 74
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +G IDYKD+ L ++++ GKIVPSRI+ K QR+L++A+KRARYL L+ Y +
Sbjct: 14 TAEGVKEIDYKDLATLKDYITETGKIVPSRITGTKAKYQRQLSRAVKRARYLALLPYCD 72
>gi|222474849|ref|YP_002563264.1| small subunit ribosomal protein S18 (rpsR) [Anaplasma marginale
str. Florida]
gi|254994706|ref|ZP_05276896.1| 30S ribosomal protein S18 [Anaplasma marginale str. Mississippi]
gi|255002819|ref|ZP_05277783.1| 30S ribosomal protein S18 [Anaplasma marginale str. Puerto Rico]
gi|255003952|ref|ZP_05278753.1| 30S ribosomal protein S18 [Anaplasma marginale str. Virginia]
gi|222418985|gb|ACM49008.1| small subunit ribosomal protein S18 (rpsR) [Anaplasma marginale
str. Florida]
Length = 100
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+
Sbjct: 23 HSPLVYLKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSRKQK 82
Query: 64 ELAKAIKRARYLGLIAYV 81
LA+A+KRAR+L L+ Y
Sbjct: 83 LLARAVKRARFLALLPYC 100
>gi|240047576|ref|YP_002960964.1| 30S ribosomal protein S18 [Mycoplasma conjunctivae HRC/581]
gi|239985148|emb|CAT05158.1| 30S ribosomal protein S18 [Mycoplasma conjunctivae]
Length = 87
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK+ LL + ++ GKI PSR+S K QR+LA+A+KRAR + L+ +
Sbjct: 14 CQFCEANLLYIDYKNTELLKKSINVFGKIQPSRVSGSCAKHQRKLAQAVKRARMIALLPF 73
Query: 81 VN 82
+
Sbjct: 74 IG 75
>gi|308234045|ref|ZP_07664782.1| ribosomal protein S18 [Atopobium vaginae DSM 15829]
gi|328943442|ref|ZP_08240907.1| 30S ribosomal protein S18 [Atopobium vaginae DSM 15829]
gi|327491411|gb|EGF23185.1| 30S ribosomal protein S18 [Atopobium vaginae DSM 15829]
Length = 90
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK L +DYKD +LL +F++ RGKI P R++ + + Q +A AIKRAR +
Sbjct: 12 PRRKFSQLDKAELDFVDYKDTQLLRKFMTDRGKIKPRRVTGICTQHQHNVAMAIKRAREM 71
Query: 76 GLIAYV 81
L+ Y
Sbjct: 72 ALLPYT 77
>gi|118602663|ref|YP_903878.1| 30S ribosomal protein S18 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|205617138|sp|A1AWV0|RS18_RUTMC RecName: Full=30S ribosomal protein S18
gi|118567602|gb|ABL02407.1| SSU ribosomal protein S18P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 84
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR C + G RIDYKD+ L + +++ GKI PSR++ S K QR+L AIK
Sbjct: 9 RRPQIKINTFCRFTAAGITRIDYKDVDTLLKNINESGKITPSRMTGTSAKFQRQLTTAIK 68
Query: 71 RARYLGLIAYVN 82
RAR+L LI Y +
Sbjct: 69 RARFLALIPYTD 80
>gi|327399727|ref|YP_004340596.1| 30S ribosomal protein S18 [Hippea maritima DSM 10411]
gi|327182356|gb|AEA34537.1| 30S ribosomal protein S18 [Hippea maritima DSM 10411]
Length = 86
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 11 RRNVSHR---RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
R+ R +K C IDYKDI LL+R++++R KIV + ++ + QR L K
Sbjct: 6 RKKRFFRYPKKKVCHFCTNKIEEIDYKDIDLLSRYVTERYKIVGRKTTATCARHQRMLTK 65
Query: 68 AIKRARYLGLIAYV 81
AIKRAR + L+ +
Sbjct: 66 AIKRARVMALMPFT 79
>gi|146305681|ref|YP_001186146.1| 30S ribosomal protein S18 [Pseudomonas mendocina ymp]
gi|330501635|ref|YP_004378504.1| 30S ribosomal protein S18 [Pseudomonas mendocina NK-01]
gi|166220976|sp|A4XPZ8|RS18_PSEMY RecName: Full=30S ribosomal protein S18
gi|145573882|gb|ABP83414.1| SSU ribosomal protein S18P [Pseudomonas mendocina ymp]
gi|328915921|gb|AEB56752.1| 30S ribosomal protein S18 [Pseudomonas mendocina NK-01]
Length = 76
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEDVKEIDFKDLNTLKAYISETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTD 72
>gi|260072537|gb|ACX30437.1| ribosomal protein S18 [uncultured SUP05 cluster bacterium]
gi|269468495|gb|EEZ80153.1| ribosomal protein S18 [uncultured SUP05 cluster bacterium]
Length = 84
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + C + G IDYKD+ +L + + + GKI PSR++ + K QR+L AIK
Sbjct: 9 RRPLIKINSFCRFTAAGVKEIDYKDVDVLLKNIDESGKITPSRMTGTTAKFQRQLTTAIK 68
Query: 71 RARYLGLIAYVN 82
RAR+L LI Y +
Sbjct: 69 RARFLALIPYTD 80
>gi|187917991|ref|YP_001883554.1| 30S ribosomal protein S18 [Borrelia hermsii DAH]
gi|229559964|sp|B2S1U7|RS18_BORHD RecName: Full=30S ribosomal protein S18
gi|119860839|gb|AAX16634.1| SSU ribosomal protein S18P [Borrelia hermsii DAH]
Length = 96
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K+C DYK+ L +F++++GKI+P RI+ S K QR LA IK+AR
Sbjct: 28 RFFKKKTCKFC-DMDRVPDYKEFDFLKKFITEQGKILPRRITGTSAKHQRRLALEIKKAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|166367546|ref|YP_001659819.1| 30S ribosomal protein S18 [Microcystis aeruginosa NIES-843]
gi|189029681|sp|B0JVN4|RS18_MICAN RecName: Full=30S ribosomal protein S18
gi|166089919|dbj|BAG04627.1| 30S ribosomal protein S18 [Microcystis aeruginosa NIES-843]
Length = 71
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+S IDYKD LL +F+++RGKI+P RI+ ++ K+QR+L +A+KRAR
Sbjct: 3 YYRKRLSPISPS--QPIDYKDTELLRKFITERGKILPRRITGLTSKQQRDLTEAVKRARL 60
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 61 MALLPFVN 68
>gi|73667308|ref|YP_303324.1| 30S ribosomal protein S18 [Ehrlichia canis str. Jake]
gi|123773361|sp|Q3YRC9|RS18_EHRCJ RecName: Full=30S ribosomal protein S18
gi|72394449|gb|AAZ68726.1| SSU ribosomal protein S18P [Ehrlichia canis str. Jake]
Length = 95
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+P L+R R K+CPL IDYK+ LL++F S+ G+I+PSRI+SVS +K
Sbjct: 16 TAYSPLAYLKRPYFKRSKACPLEQCPNEDIDYKNKTLLSKFTSEYGRILPSRITSVSSRK 75
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR L+ A+KRARYL L+ Y
Sbjct: 76 QRLLSTAVKRARYLALLPYC 95
>gi|134103769|ref|YP_001109430.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|291007704|ref|ZP_06565677.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|205556690|sp|A4FR30|RS182_SACEN RecName: Full=30S ribosomal protein S18 2
gi|133916392|emb|CAM06505.1| 30S ribosomal subunit protein S18 [Saccharopolyspora erythraea
NRRL 2338]
Length = 79
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 14 VSHRRKSCPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
++K C A + IDYKD LL +++S RGKI R++ + QR++A A+K A
Sbjct: 7 RKPKKKVCVFCKDKAAQSIDYKDTTLLRKYISDRGKIRARRVTGNCSQHQRDVAIAVKNA 66
Query: 73 RYLGLIAYVN 82
R + L+ Y +
Sbjct: 67 REMALLPYTS 76
>gi|302527614|ref|ZP_07279956.1| ribosomal protein S18 [Streptomyces sp. AA4]
gi|302436509|gb|EFL08325.1| ribosomal protein S18 [Streptomyces sp. AA4]
Length = 81
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 47/74 (63%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
T + + + + RR+ G R+D+KD+ LL +F+S RGKI R++ ++ ++Q+++A
Sbjct: 2 TAMPKPDRTPRRRPNAFHAAGITRVDWKDVDLLRKFISDRGKIRARRVTGLTPQQQKQVA 61
Query: 67 KAIKRARYLGLIAY 80
AIK AR + L+ Y
Sbjct: 62 TAIKNAREMALLPY 75
>gi|288926386|ref|ZP_06420308.1| ribosomal protein S18 [Prevotella buccae D17]
gi|315608713|ref|ZP_07883691.1| 30S ribosomal protein S18 [Prevotella buccae ATCC 33574]
gi|288336839|gb|EFC75203.1| ribosomal protein S18 [Prevotella buccae D17]
gi|315249563|gb|EFU29574.1| 30S ribosomal protein S18 [Prevotella buccae ATCC 33574]
Length = 90
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYV 85
>gi|324998552|ref|ZP_08119664.1| 30S ribosomal protein S18 [Pseudonocardia sp. P1]
Length = 78
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C A IDYKD LL +F+S RGKI R++ + QR++A A+K +R
Sbjct: 7 RKPKKKVCAFCKDKAQPIDYKDTGLLRKFISDRGKIRARRVTGNCRQHQRDVAVAVKNSR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EVALLPYTS 75
>gi|26991556|ref|NP_746981.1| 30S ribosomal protein S18 [Pseudomonas putida KT2440]
gi|104783859|ref|YP_610357.1| 30S ribosomal protein S18 [Pseudomonas entomophila L48]
gi|148549959|ref|YP_001270061.1| 30S ribosomal protein S18 [Pseudomonas putida F1]
gi|167035922|ref|YP_001671153.1| 30S ribosomal protein S18 [Pseudomonas putida GB-1]
gi|170723828|ref|YP_001751516.1| 30S ribosomal protein S18 [Pseudomonas putida W619]
gi|325271216|ref|ZP_08137761.1| 30S ribosomal protein S18 [Pseudomonas sp. TJI-51]
gi|38258490|sp|Q88DE9|RS18_PSEPK RecName: Full=30S ribosomal protein S18
gi|122985731|sp|Q1I462|RS18_PSEE4 RecName: Full=30S ribosomal protein S18
gi|166220977|sp|A5W9R7|RS18_PSEP1 RecName: Full=30S ribosomal protein S18
gi|189029684|sp|B0KKY2|RS18_PSEPG RecName: Full=30S ribosomal protein S18
gi|229560054|sp|B1JAH0|RS18_PSEPW RecName: Full=30S ribosomal protein S18
gi|24986641|gb|AAN70445.1|AE016685_10 ribosomal protein S18 [Pseudomonas putida KT2440]
gi|95112846|emb|CAK17574.1| 30S ribosomal protein S18 [Pseudomonas entomophila L48]
gi|148514017|gb|ABQ80877.1| SSU ribosomal protein S18P [Pseudomonas putida F1]
gi|166862410|gb|ABZ00818.1| ribosomal protein S18 [Pseudomonas putida GB-1]
gi|169761831|gb|ACA75147.1| ribosomal protein S18 [Pseudomonas putida W619]
gi|313500860|gb|ADR62226.1| RpsR [Pseudomonas putida BIRD-1]
gi|324103619|gb|EGC00921.1| 30S ribosomal protein S18 [Pseudomonas sp. TJI-51]
Length = 76
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + ID+KD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+ Y +
Sbjct: 14 TAEDVKEIDFKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTD 72
>gi|17231943|ref|NP_488491.1| 30S ribosomal protein S18 [Nostoc sp. PCC 7120]
gi|75907544|ref|YP_321840.1| 30S ribosomal protein S18 [Anabaena variabilis ATCC 29413]
gi|20978694|sp|Q8YNW0|RS18_ANASP RecName: Full=30S ribosomal protein S18
gi|123731561|sp|Q3MDJ1|RS18_ANAVT RecName: Full=30S ribosomal protein S18
gi|17133587|dbj|BAB76150.1| 30S ribosomal protein S18 [Nostoc sp. PCC 7120]
gi|75701269|gb|ABA20945.1| SSU ribosomal protein S18P [Anabaena variabilis ATCC 29413]
Length = 71
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ K+QREL AIKR+R
Sbjct: 3 YYRRRLSPIK--PGEPIDYKDVDLLRKFITERGKILPRRITGLTAKQQRELTLAIKRSRL 60
Query: 75 LGLIAYVN 82
+ L+ ++N
Sbjct: 61 VALLPFIN 68
>gi|307566431|ref|ZP_07628866.1| 30S ribosomal protein S18 [Prevotella amnii CRIS 21A-A]
gi|307344856|gb|EFN90258.1| 30S ribosomal protein S18 [Prevotella amnii CRIS 21A-A]
Length = 89
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 SGIKYIDYKDPNFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|194246576|ref|YP_002004215.1| 30S ribosomal protein S18 [Candidatus Phytoplasma mali]
gi|193806933|emb|CAP18365.1| SSU ribosomal protein S18P [Candidatus Phytoplasma mali]
Length = 78
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C + +ID+KDI LL +F++++GKI+P RI+ S QR LA AIKRAR++ L+
Sbjct: 15 VCYFTDNKITKIDFKDIELLKKFITEQGKIIPKRITGTSAIWQRRLAIAIKRARHMALLP 74
Query: 80 YV 81
++
Sbjct: 75 FI 76
>gi|300727908|ref|ZP_07061286.1| ribosomal protein S18 [Prevotella bryantii B14]
gi|299774750|gb|EFI71364.1| ribosomal protein S18 [Prevotella bryantii B14]
Length = 90
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 SGIKYIDYKDPEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|91204936|ref|YP_537291.1| 30S ribosomal protein S18 [Rickettsia bellii RML369-C]
gi|157827736|ref|YP_001496800.1| 30S ribosomal protein S18 [Rickettsia bellii OSU 85-389]
gi|123084595|sp|Q1RKB2|RS18_RICBR RecName: Full=30S ribosomal protein S18
gi|166220983|sp|A8GY13|RS18_RICB8 RecName: Full=30S ribosomal protein S18
gi|91068480|gb|ABE04202.1| 30S ribosomal protein S18 [Rickettsia bellii RML369-C]
gi|157803040|gb|ABV79763.1| 30S ribosomal protein S18 [Rickettsia bellii OSU 85-389]
Length = 94
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L AIK
Sbjct: 20 KKVFFRRRKGCPLSVPNAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAIK 79
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 80 IARILALLPFV 90
>gi|160947594|ref|ZP_02094761.1| hypothetical protein PEPMIC_01529 [Parvimonas micra ATCC 33270]
gi|158446728|gb|EDP23723.1| hypothetical protein PEPMIC_01529 [Parvimonas micra ATCC 33270]
Length = 74
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++R R+K + +DYKD+ L +F+S+RGKI+P R++ + K+QRE+ AI
Sbjct: 1 MQRKFRPRKKVVAYFSDNSKPLDYKDVNTLKKFISERGKILPRRVTGATAKQQREITAAI 60
Query: 70 KRARYLGLIAY 80
K+AR + L+ Y
Sbjct: 61 KKARQVALLPY 71
>gi|222099030|ref|YP_002533598.1| 30S ribosomal protein S18 [Thermotoga neapolitana DSM 4359]
gi|221571421|gb|ACM22233.1| 30S ribosomal protein S18 [Thermotoga neapolitana DSM 4359]
Length = 78
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L +DYKD +LL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+
Sbjct: 18 LCEMKLDYVDYKDTKLLSDFLTDKGKIIPKRLTGTCAKHQRMVKVAIKRARQMGLLPYLK 77
Query: 83 L 83
+
Sbjct: 78 I 78
>gi|119509768|ref|ZP_01628913.1| 30S ribosomal protein S18 [Nodularia spumigena CCY9414]
gi|119465634|gb|EAW46526.1| 30S ribosomal protein S18 [Nodularia spumigena CCY9414]
Length = 71
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL +++++RGKI+P RI+ ++ K+QR+L AIKRAR
Sbjct: 3 YYRRRLSPIK--PGDPIDYKDVDLLRKYITERGKILPRRITGLTCKQQRDLTLAIKRARI 60
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 61 VALLPFVN 68
>gi|282895502|ref|ZP_06303639.1| Ribosomal protein S18 [Raphidiopsis brookii D9]
gi|281199535|gb|EFA74398.1| Ribosomal protein S18 [Raphidiopsis brookii D9]
Length = 71
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+L AIKRAR
Sbjct: 3 YYRRRLSPIK--PGEPIDYKDVDLLRKFMTERGKILPRRITGLTSQQQRQLTLAIKRARI 60
Query: 75 LGLIAYVN 82
L + ++N
Sbjct: 61 LAFLPFIN 68
>gi|325972886|ref|YP_004249950.1| 30S ribosomal protein S18 [Mycoplasma suis str. Illinois]
gi|323651488|gb|ADX97570.1| 30S ribosomal protein S18 [Mycoplasma suis str. Illinois]
Length = 124
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RRN +K C L +G IDYKD L +L + K++ +IS K Q +L++AIK
Sbjct: 53 RRNKKF-KKVCWLCRRGILTIDYKDTEFLKNYLKRYNKVLIHKISGNCLKHQHQLSQAIK 111
Query: 71 RARYLGLIAYV 81
RARY+ L+ +V
Sbjct: 112 RARYIALLPFV 122
>gi|260888679|ref|ZP_05899942.1| ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
gi|260861611|gb|EEX76111.1| ribosomal protein S18 [Selenomonas sputigena ATCC 35185]
Length = 59
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYKD+ L RF+++RGKI+P RIS K QR++ AIKRAR + L+ +
Sbjct: 2 DKVDVIDYKDVAKLRRFITERGKILPRRISGNCAKHQRQVTLAIKRARNIALLPFT 57
>gi|157964105|ref|YP_001498929.1| 30S ribosomal protein S18 [Rickettsia massiliae MTU5]
gi|167011193|sp|A8F0E6|RS18_RICM5 RecName: Full=30S ribosomal protein S18
gi|157843881|gb|ABV84382.1| 30S ribosomal protein S18 [Rickettsia massiliae MTU5]
Length = 95
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ RRK CPLS AP IDYK+ LL +F+S+ G+++PSRI++V KKQR+L A+K
Sbjct: 21 KKVFFRRRKGCPLSVPHAPVIDYKNPELLIKFVSEGGRMLPSRITNVCAKKQRKLNNAVK 80
Query: 71 RARYLGLIAYV 81
AR L L+ +V
Sbjct: 81 IARILALLPFV 91
>gi|260592153|ref|ZP_05857611.1| ribosomal protein S18 [Prevotella veroralis F0319]
gi|288802528|ref|ZP_06407967.1| ribosomal protein S18 [Prevotella melaninogenica D18]
gi|302346422|ref|YP_003814720.1| ribosomal protein S18 [Prevotella melaninogenica ATCC 25845]
gi|325857451|ref|ZP_08172506.1| ribosomal protein S18 [Prevotella denticola CRIS 18C-A]
gi|327314149|ref|YP_004329586.1| 30S ribosomal protein S18 [Prevotella denticola F0289]
gi|260535787|gb|EEX18404.1| ribosomal protein S18 [Prevotella veroralis F0319]
gi|288335056|gb|EFC73492.1| ribosomal protein S18 [Prevotella melaninogenica D18]
gi|302150343|gb|ADK96604.1| ribosomal protein S18 [Prevotella melaninogenica ATCC 25845]
gi|325483161|gb|EGC86141.1| ribosomal protein S18 [Prevotella denticola CRIS 18C-A]
gi|326944059|gb|AEA19944.1| ribosomal protein S18 [Prevotella denticola F0289]
Length = 89
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 29 SGIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 85
>gi|118475552|ref|YP_892291.1| 30S ribosomal protein S18 [Campylobacter fetus subsp. fetus
82-40]
gi|261885280|ref|ZP_06009319.1| 30S ribosomal protein S18 [Campylobacter fetus subsp. venerealis
str. Azul-94]
gi|166220938|sp|A0RQ08|RS18_CAMFF RecName: Full=30S ribosomal protein S18
gi|118414778|gb|ABK83198.1| ribosomal protein S18 [Campylobacter fetus subsp. fetus 82-40]
Length = 86
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + +K C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MAEKRKYSKKYCKYTEAKVEFIDYKDTTLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHVALIPYI 72
>gi|222823954|ref|YP_002575528.1| 30S ribosomal protein S18 [Campylobacter lari RM2100]
gi|254765417|sp|B9KCI8|RS18_CAMLR RecName: Full=30S ribosomal protein S18
gi|222539176|gb|ACM64277.1| 30S ribosomal protein S18 [Campylobacter lari RM2100]
Length = 86
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKRKYSRKYCKYTEAKVDFIDYKDTALLKHALSERFKIMPRRLTGTSKKHQEMVEIAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHVALIPYI 72
>gi|33861426|ref|NP_892987.1| 30S ribosomal protein S18 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|78779316|ref|YP_397428.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9312]
gi|123966183|ref|YP_001011264.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9515]
gi|123968526|ref|YP_001009384.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. AS9601]
gi|126696329|ref|YP_001091215.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9301]
gi|157413359|ref|YP_001484225.1| 30S ribosomal protein S18 [Prochlorococcus marinus str. MIT 9215]
gi|254525976|ref|ZP_05138028.1| ribosomal protein S18 [Prochlorococcus marinus str. MIT 9202]
gi|59798835|sp|Q7TUA0|RS18_PROMP RecName: Full=30S ribosomal protein S18
gi|123741464|sp|Q31AV3|RS18_PROM9 RecName: Full=30S ribosomal protein S18
gi|166220970|sp|A3PCY9|RS18_PROM0 RecName: Full=30S ribosomal protein S18
gi|166220973|sp|A2BWJ6|RS18_PROM5 RecName: Full=30S ribosomal protein S18
gi|166220974|sp|A2BR66|RS18_PROMS RecName: Full=30S ribosomal protein S18
gi|167011192|sp|A8G4V8|RS18_PROM2 RecName: Full=30S ribosomal protein S18
gi|33634003|emb|CAE19328.1| 30S Ribosomal protein S18 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|78712815|gb|ABB49992.1| SSU ribosomal protein S18P [Prochlorococcus marinus str. MIT
9312]
gi|123198636|gb|ABM70277.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. AS9601]
gi|123200549|gb|ABM72157.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9515]
gi|126543372|gb|ABO17614.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9301]
gi|157387934|gb|ABV50639.1| 30S Ribosomal protein S18 [Prochlorococcus marinus str. MIT 9215]
gi|221537400|gb|EEE39853.1| ribosomal protein S18 [Prochlorococcus marinus str. MIT 9202]
Length = 73
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+++ P+ IDYKD+ LL +F+++RGKI+P R++ ++ K+QR+L A+KRAR +
Sbjct: 6 FKKQLSPIK--PGDPIDYKDVELLKKFITERGKILPRRMTGLTSKQQRDLTLAVKRARIV 63
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 64 ALLPFVN 70
>gi|68536624|ref|YP_251329.1| 30S ribosomal protein S18 [Corynebacterium jeikeium K411]
gi|260577825|ref|ZP_05845759.1| 30S ribosomal protein S18 [Corynebacterium jeikeium ATCC 43734]
gi|123734548|sp|Q4JTZ6|RS18_CORJK RecName: Full=30S ribosomal protein S18
gi|68264223|emb|CAI37711.1| 30S ribosomal protein S18 [Corynebacterium jeikeium K411]
gi|258604052|gb|EEW17295.1| 30S ribosomal protein S18 [Corynebacterium jeikeium ATCC 43734]
Length = 82
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL +G +DYK+ LL +F+S+RGKI R++ ++ ++QR++A A+K
Sbjct: 10 RMEQSRRPKKNPLKAEGIETVDYKNYDLLRKFISERGKIRSRRVTGLTPQQQRQVATAVK 69
Query: 71 RARYLGLIAY 80
AR + L+ +
Sbjct: 70 NAREMALLPF 79
>gi|282901219|ref|ZP_06309148.1| Ribosomal protein S18 [Cylindrospermopsis raciborskii CS-505]
gi|281193919|gb|EFA68887.1| Ribosomal protein S18 [Cylindrospermopsis raciborskii CS-505]
Length = 71
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR+L AIKRAR
Sbjct: 3 YYRRRLSPIK--PGEPIDYKDVELLRKFMTERGKILPRRITGLTSQQQRQLTLAIKRARI 60
Query: 75 LGLIAYVN 82
L ++ ++N
Sbjct: 61 LAMLPFIN 68
>gi|327403002|ref|YP_004343840.1| 30S ribosomal protein S18P [Fluviicola taffensis DSM 16823]
gi|327318510|gb|AEA43002.1| SSU ribosomal protein S18P [Fluviicola taffensis DSM 16823]
Length = 87
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ K C G ID+KD L R ++++GKI+P RI+ S K Q+ + KAIKRAR+L
Sbjct: 17 KKDKYCRFKKSGIKFIDFKDATFLLRLVNEQGKILPRRITGTSAKYQKRVNKAIKRARHL 76
Query: 76 GLIAYVN 82
++ YV
Sbjct: 77 AILPYVG 83
>gi|40062773|gb|AAR37667.1| ribosomal protein S18 [uncultured marine bacterium 439]
Length = 85
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 9 LLRRNVSHRRKS-------CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ ++ V+ RRK C + G IDYKD+ +L + + GKI PSRI+ S K
Sbjct: 1 MAKKQVTKRRKFQIPINRFCRFTKAGFKEIDYKDVDILLKNIDDSGKITPSRITGTSAKF 60
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+L AIKRAR+L LI Y +
Sbjct: 61 QRQLTTAIKRARFLALIPYTD 81
>gi|58584758|ref|YP_198331.1| 30S ribosomal protein S18 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75507965|sp|Q5GSD5|RS18_WOLTR RecName: Full=30S ribosomal protein S18
gi|58419074|gb|AAW71089.1| Ribosomal protein S18 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 91
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R K CPL+ IDYK+ LL+RF S G+I+P R++ V KKQR+L AI
Sbjct: 17 NRTGFKRSKVCPLATSQDEDIDYKNTDLLSRFTSDYGRILPRRLTGVCAKKQRKLRLAII 76
Query: 71 RARYLGLIAYVN 82
RAR+L L+ Y
Sbjct: 77 RARFLALVPYCT 88
>gi|54310417|ref|YP_131437.1| putative ribosomal protein S18 [Photobacterium profundum SS9]
gi|90414462|ref|ZP_01222438.1| putative ribosomal protein S18 [Photobacterium profundum 3TCK]
gi|59798724|sp|Q6LM43|RS18_PHOPR RecName: Full=30S ribosomal protein S18
gi|46914858|emb|CAG21635.1| putative ribosomal protein S18 [Photobacterium profundum SS9]
gi|90324467|gb|EAS41026.1| putative ribosomal protein S18 [Photobacterium profundum 3TCK]
Length = 75
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++++ GKIVPSRI+ K QR+LA+AIKR+RYL L+ Y +
Sbjct: 14 TAEDVQEIDYKDVVTLKNYITEAGKIVPSRITGTRAKYQRQLARAIKRSRYLALLPYTD 72
>gi|297158762|gb|ADI08474.1| 30S ribosomal protein S18 [Streptomyces bingchenggensis BCW-1]
Length = 64
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +DYKD LL +F+S RGKI R++ + QR++A A+K +R + L+ Y +
Sbjct: 2 FCKEKISYVDYKDTNLLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPYTS 61
>gi|186685032|ref|YP_001868228.1| 30S ribosomal protein S18 [Nostoc punctiforme PCC 73102]
gi|229560047|sp|B2J0D3|RS18_NOSP7 RecName: Full=30S ribosomal protein S18
gi|186467484|gb|ACC83285.1| ribosomal protein S18 [Nostoc punctiforme PCC 73102]
Length = 71
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QREL AIKR+R
Sbjct: 3 YFRRRLSPIK--PGEPIDYKDVDLLRKFVTERGKILPRRITGLTSQQQRELTLAIKRSRI 60
Query: 75 LGLIAYVN 82
+ L+ ++N
Sbjct: 61 VALLPFIN 68
>gi|326383849|ref|ZP_08205533.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
gi|326197308|gb|EGD54498.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
Length = 74
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C IDYKD LL RFLS RGKI R++ + QR++A A+K +R + L+
Sbjct: 8 KACTFCKDKKTVIDYKDTALLRRFLSDRGKIRSRRVTGNCVQHQRDVAVAVKNSREVALL 67
Query: 79 AYVN 82
+ +
Sbjct: 68 PFTS 71
>gi|11467346|ref|NP_043203.1| ribosomal protein S18 [Cyanophora paradoxa]
gi|133835|sp|P15760|RR18_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S18
gi|11400|emb|CAA35533.1| S18 ribosomal protein [Cyanophora paradoxa]
gi|1016147|gb|AAA81234.1| ribosomal protein S18 [Cyanophora paradoxa]
Length = 71
Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RR+ PL IDY+D+ LL F++ +GKI+P R++ ++ K+QR + KAIK+AR L
Sbjct: 4 YRRRLSPLKPNQV--IDYQDVELLRTFITDQGKILPRRVTGLTAKQQRAVTKAIKQARVL 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 ALLPFVN 68
>gi|261855980|ref|YP_003263263.1| ribosomal protein S18 [Halothiobacillus neapolitanus c2]
gi|261836449|gb|ACX96216.1| ribosomal protein S18 [Halothiobacillus neapolitanus c2]
Length = 74
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + +IDYKD+ L ++L++ GKIVP+R++ + + QR+L AIKRAR+L L+ Y +
Sbjct: 14 TAENVKQIDYKDLDTLKQYLTETGKIVPARVTGTAARYQRQLQTAIKRARFLALLPYTD 72
>gi|322433963|ref|YP_004216175.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX9]
gi|321161690|gb|ADW67395.1| ribosomal protein S18 [Acidobacterium sp. MP5ACTX9]
Length = 129
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C + I Y+D+RLL F+++RGKIVP R++ V + QR L+ AIK++
Sbjct: 58 KFFRRKKVCKFCTEKIDAISYRDVRLLQGFVAERGKIVPRRLTGVCTRHQRRLSLAIKQS 117
Query: 73 RYLGLIAY 80
R + L+A+
Sbjct: 118 RNIALLAF 125
>gi|295835236|ref|ZP_06822169.1| ribosomal protein S18 [Streptomyces sp. SPB74]
gi|197698172|gb|EDY45105.1| ribosomal protein S18 [Streptomyces sp. SPB74]
Length = 79
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ PL G IDYKD LL +FLS RGKI R++ VS ++QR+LA AIK AR + L+
Sbjct: 15 RPNPLDAAGITYIDYKDTDLLRKFLSDRGKIRSRRVTRVSAQQQRQLATAIKNAREMALL 74
Query: 79 AY 80
Y
Sbjct: 75 PY 76
>gi|37522628|ref|NP_926005.1| 30S ribosomal protein S18 [Gloeobacter violaceus PCC 7421]
gi|59798825|sp|Q7NCC0|RS18_GLOVI RecName: Full=30S ribosomal protein S18
gi|35213629|dbj|BAC91000.1| 30S ribosomal protein S18 [Gloeobacter violaceus PCC 7421]
Length = 74
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
++ P+ K +IDYK++ LL +F+++RGKI+P RI+ ++ K+QR+L AIKRAR
Sbjct: 6 YRGKRVSPIPPK--DKIDYKEVDLLRKFITERGKILPRRITGLTAKQQRDLTVAIKRARL 63
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 64 LALLPFVN 71
>gi|332712187|ref|ZP_08432115.1| SSU ribosomal protein S18P [Lyngbya majuscula 3L]
gi|332348993|gb|EGJ28605.1| SSU ribosomal protein S18P [Lyngbya majuscula 3L]
Length = 71
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R++ P+ IDYKD+ LL +F+++RGKI+P RI++++ ++QR+L AIKRAR
Sbjct: 2 TYFRKRLSPIKPD--EPIDYKDVELLRKFITERGKILPRRITNLTTQQQRKLTTAIKRAR 59
Query: 74 YLGLIAYVN 82
+L L+ Y+N
Sbjct: 60 FLALLPYIN 68
>gi|218246505|ref|YP_002371876.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 8801]
gi|257059538|ref|YP_003137426.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 8802]
gi|218166983|gb|ACK65720.1| ribosomal protein S18 [Cyanothece sp. PCC 8801]
gi|256589704|gb|ACV00591.1| ribosomal protein S18 [Cyanothece sp. PCC 8802]
Length = 71
Score = 101 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ + IDYKD LL +F+++RGK++P RI+ ++ K+QR+L KA+KRAR+
Sbjct: 3 YYRKRLSPI--APSQPIDYKDTELLRKFITERGKLLPRRITGLTAKQQRDLTKAVKRARF 60
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 61 LALLPFVN 68
>gi|302870697|ref|YP_003839334.1| 30S ribosomal protein S18 [Micromonospora aurantiaca ATCC 27029]
gi|315506934|ref|YP_004085821.1| ribosomal protein s18 [Micromonospora sp. L5]
gi|302573556|gb|ADL49758.1| ribosomal protein S18 [Micromonospora aurantiaca ATCC 27029]
gi|315413553|gb|ADU11670.1| ribosomal protein S18 [Micromonospora sp. L5]
Length = 79
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR
Sbjct: 8 RKPKKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAR 67
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 68 EMALLPYT 75
>gi|159040547|ref|YP_001539800.1| 30S ribosomal protein S18 [Salinispora arenicola CNS-205]
gi|238061877|ref|ZP_04606586.1| 30S ribosomal protein S18 [Micromonospora sp. ATCC 39149]
gi|330470800|ref|YP_004408543.1| 30S ribosomal protein S18 [Verrucosispora maris AB-18-032]
gi|205617156|sp|A8LXG1|RS18_SALAI RecName: Full=30S ribosomal protein S18
gi|157919382|gb|ABW00810.1| ribosomal protein S18 [Salinispora arenicola CNS-205]
gi|237883688|gb|EEP72516.1| 30S ribosomal protein S18 [Micromonospora sp. ATCC 39149]
gi|328813771|gb|AEB47943.1| 30S ribosomal protein S18 [Verrucosispora maris AB-18-032]
Length = 79
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR
Sbjct: 8 RKPKKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAR 67
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 68 EMALLPYT 75
>gi|226309316|ref|YP_002769276.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229489899|ref|ZP_04383754.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
gi|226188433|dbj|BAH36537.1| probable 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229323195|gb|EEN88961.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
Length = 80
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +I+YKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKVM-KKKVCTFCKEKNTQINYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDV 60
Query: 66 AKAIKRARYLGLIAYVNL 83
A A+K +R + L+ Y +
Sbjct: 61 AIAVKNSREVALLPYATV 78
>gi|158337925|ref|YP_001519101.1| 30S ribosomal protein S18 [Acaryochloris marina MBIC11017]
gi|189029665|sp|B0C2J3|RS18_ACAM1 RecName: Full=30S ribosomal protein S18
gi|158308166|gb|ABW29783.1| 30S ribosomal protein S18 [Acaryochloris marina MBIC11017]
Length = 71
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+RR+ P+ IDYKD+ LL RF+++RGKI+P RI+ ++ ++QR+L +AIK+AR
Sbjct: 3 YYRRRVSPIK--PGDPIDYKDVDLLRRFITERGKILPRRITGLTARQQRDLTRAIKQARV 60
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 61 LALLPFIN 68
>gi|226226611|ref|YP_002760717.1| 30S ribosomal protein S18 [Gemmatimonas aurantiaca T-27]
gi|226089802|dbj|BAH38247.1| 30S ribosomal protein S18 [Gemmatimonas aurantiaca T-27]
Length = 73
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ +K CP++ G +DYKD RLL RF++ GKI+PSR+S V + QR+L+KA+K+AR
Sbjct: 1 MRRPKKPCPITEAGIRYVDYKDDRLLARFITDYGKILPSRLSGVDARHQRQLSKAVKKAR 60
Query: 74 YLGLIAYV 81
YL L+ YV
Sbjct: 61 YLALLPYV 68
>gi|303235604|ref|ZP_07322211.1| ribosomal protein S18 [Prevotella disiens FB035-09AN]
gi|302484051|gb|EFL47039.1| ribosomal protein S18 [Prevotella disiens FB035-09AN]
Length = 90
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G IDYKD L +FL+++GKI+P RI+ S K QR +A+A+KRAR + L+ YV
Sbjct: 30 SGIKYIDYKDGEFLKKFLNEQGKILPRRITGTSLKYQRRVAQAVKRARQIALLPYVT 86
>gi|113477197|ref|YP_723258.1| 30S ribosomal protein S18 [Trichodesmium erythraeum IMS101]
gi|122964596|sp|Q10Y89|RS18_TRIEI RecName: Full=30S ribosomal protein S18
gi|110168245|gb|ABG52785.1| SSU ribosomal protein S18P [Trichodesmium erythraeum IMS101]
Length = 72
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ IDYKD+ LL +++++RGKI+P RI+ ++ K+QR+L K+IKRAR
Sbjct: 4 YYRKRVSPIK--PGDPIDYKDVELLKKYITERGKIMPRRITGLTSKQQRDLTKSIKRARL 61
Query: 75 LGLIAYVN 82
+ L+ YVN
Sbjct: 62 VALLPYVN 69
>gi|94502360|ref|ZP_01308826.1| ribosomal protein S18 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833772|ref|YP_001597968.1| 30S ribosomal subunit protein S18 [Candidatus Sulcia muelleri GWSS]
gi|205617784|sp|A8Z621|RS18_SULMW RecName: Full=30S ribosomal protein S18
gi|94451085|gb|EAT14044.1| ribosomal protein S18 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206262|gb|ABS30572.1| 30S ribosomal subunit protein S18 [Candidatus Sulcia muelleri GWSS]
Length = 180
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
K C ID+K+ L +FL++RG+I+P RI+ S K Q++L +AIK+
Sbjct: 107 ETKPENKYCFFKKNNIKYIDFKNPSFLMKFLNERGEILPRRITGTSKKFQKKLKRAIKKC 166
Query: 73 RYLGLIAYVN 82
+++GL+ Y+
Sbjct: 167 KHIGLLPYLT 176
>gi|304373311|ref|YP_003856520.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
gi|304309502|gb|ADM21982.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
Length = 80
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ +L +F++ GKI PSRI+ K QR+++ AIKRAR + L+A+
Sbjct: 14 CHFCETQTVYIDYKNVEVLEKFVNPHGKIQPSRITGSCSKHQRQVSLAIKRARMIALMAF 73
Query: 81 VN 82
V
Sbjct: 74 VG 75
>gi|307325551|ref|ZP_07604752.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|306888679|gb|EFN19664.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 94
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL G+ IDYKD LL +F+S RGKI R++ VS ++QR+LA+AIK AR + L+ Y
Sbjct: 32 NPLDKAGSTYIDYKDTELLRKFISDRGKIRGRRVTRVSAQQQRQLARAIKNAREMALLPY 91
>gi|145597063|ref|YP_001161360.1| 30S ribosomal protein S18 [Salinispora tropica CNB-440]
gi|205617371|sp|A4XDG6|RS18_SALTO RecName: Full=30S ribosomal protein S18
gi|145306400|gb|ABP56982.1| SSU ribosomal protein S18P [Salinispora tropica CNB-440]
Length = 93
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A+A+K AR
Sbjct: 22 RKPKKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAR 81
Query: 74 YLGLIAYV 81
+ L+ Y
Sbjct: 82 EMALLPYT 89
>gi|307299235|ref|ZP_07579036.1| ribosomal protein S18 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915031|gb|EFN45417.1| ribosomal protein S18 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 77
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
L G IDYK+I LL +++++GKI+P RI+ K QR + +AI+RAR++ L+ Y
Sbjct: 17 LCGTKTTYIDYKNISLLRDYVTEKGKIIPKRITGNCAKHQRMVKEAIQRARFMALLPYT 75
>gi|203284038|ref|YP_002221778.1| 30S ribosomal protein S18 [Borrelia duttonii Ly]
gi|203287580|ref|YP_002222595.1| 30S ribosomal protein S18 [Borrelia recurrentis A1]
gi|229559963|sp|B5RLI7|RS18_BORDL RecName: Full=30S ribosomal protein S18
gi|229559966|sp|B5RQU0|RS18_BORRA RecName: Full=30S ribosomal protein S18
gi|201083481|gb|ACH93072.1| 30S ribosomal protein S18 [Borrelia duttonii Ly]
gi|201084800|gb|ACH94374.1| 30S ribosomal protein S18 [Borrelia recurrentis A1]
Length = 96
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K+C DYK+ L +F++++GKI+P RI+ S K QR LA IK+AR
Sbjct: 28 RFFKKKTCKFC-DMDRVPDYKEFDFLKKFITEQGKILPRRITGTSAKHQRRLALEIKKAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|313678624|ref|YP_004056364.1| 30S ribosomal protein S18 [Mycoplasma bovis PG45]
gi|312950259|gb|ADR24854.1| ribosomal protein S18 [Mycoplasma bovis PG45]
Length = 108
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A +++ + RRK C L +DYK++ + +F+S G+I P + + QR
Sbjct: 1 MANFKKVKKGRNLRRK-CELCETNIEYVDYKNVEFITKFISGIGQIKPHASTGTCARHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
++A AIKRAR++ LI Y
Sbjct: 60 KVANAIKRARFMALIPYT 77
>gi|154148306|ref|YP_001405849.1| 30S ribosomal protein S18 [Campylobacter hominis ATCC BAA-381]
gi|166220939|sp|A7I008|RS18_CAMHC RecName: Full=30S ribosomal protein S18
gi|153804315|gb|ABS51322.1| ribosomal protein S18 [Campylobacter hominis ATCC BAA-381]
Length = 87
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MADKRKYTRKYCKFTEAKIEFIDYKDTALLKYCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI Y+
Sbjct: 61 KRARQAALIPYI 72
>gi|227504198|ref|ZP_03934247.1| 30S ribosomal protein S18 [Corynebacterium striatum ATCC 6940]
gi|227199242|gb|EEI79290.1| 30S ribosomal protein S18 [Corynebacterium striatum ATCC 6940]
Length = 84
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
R + R K PL +G +DYKD++ L F+S RGKI R++ ++ ++QR+
Sbjct: 6 NNQKKFRMEQTRRPKKNPLKAEGIETVDYKDVKTLRLFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYV 81
+A A+K AR + L+ +
Sbjct: 66 VATAVKNAREMALLPFT 82
>gi|170288132|ref|YP_001738370.1| ribosomal protein S18 [Thermotoga sp. RQ2]
gi|229560077|sp|B1L8K5|RS18_THESQ RecName: Full=30S ribosomal protein S18
gi|170175635|gb|ACB08687.1| ribosomal protein S18 [Thermotoga sp. RQ2]
Length = 75
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L +DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+
Sbjct: 15 LCEMKLDYVDYKDTRLLSEFLTDKGKIIPKRLTGTCAKHQRMVKVAIKRARQMGLLPYLK 74
Query: 83 L 83
+
Sbjct: 75 I 75
>gi|167754091|ref|ZP_02426218.1| hypothetical protein ALIPUT_02379 [Alistipes putredinis DSM
17216]
gi|167658716|gb|EDS02846.1| hypothetical protein ALIPUT_02379 [Alistipes putredinis DSM
17216]
Length = 92
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIKYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFVT 88
>gi|24214377|ref|NP_711858.1| 30S ribosomal protein S18 [Leptospira interrogans serovar Lai str.
56601]
gi|304570496|ref|YP_002045.2| 30S ribosomal protein S18 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24195312|gb|AAN48876.1| 30S ribosomal protein S18 [Leptospira interrogans serovar Lai str.
56601]
Length = 103
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
AE+ P R+ +++K C + A +I+YK+I LL RF++ RGKI+P RI+ S
Sbjct: 21 AEMEGKPQ-RKQNKYKKKVCRFTADPELAKQINYKNIELLERFITNRGKIIPRRITGTSA 79
Query: 60 KKQRELAKAIKRARYLGLIAY 80
+ QR LA+ I++AR +GL+ Y
Sbjct: 80 RYQRVLAREIRKARSIGLLPY 100
>gi|28872046|ref|NP_794665.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66043849|ref|YP_233690.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae
B728a]
gi|70734082|ref|YP_257722.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf-5]
gi|71735317|ref|YP_272877.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77456763|ref|YP_346268.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf0-1]
gi|213967934|ref|ZP_03396080.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato T1]
gi|229588087|ref|YP_002870206.1| 30S ribosomal protein S18 [Pseudomonas fluorescens SBW25]
gi|237798288|ref|ZP_04586749.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|257482398|ref|ZP_05636439.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289624607|ref|ZP_06457561.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648617|ref|ZP_06479960.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
2250]
gi|298484905|ref|ZP_07003004.1| SSU ribosomal protein S18p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|301383749|ref|ZP_07232167.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato Max13]
gi|302059276|ref|ZP_07250817.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato K40]
gi|302132344|ref|ZP_07258334.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302185450|ref|ZP_07262123.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae 642]
gi|330807241|ref|YP_004351703.1| 30S ribosomal protein S18 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|38258466|sp|Q87VK4|RS18_PSESM RecName: Full=30S ribosomal protein S18
gi|81308571|sp|Q4ZYX0|RS18_PSEU2 RecName: Full=30S ribosomal protein S18
gi|123606171|sp|Q3KIX7|RS18_PSEPF RecName: Full=30S ribosomal protein S18
gi|123734036|sp|Q48NZ2|RS18_PSE14 RecName: Full=30S ribosomal protein S18
gi|123748561|sp|Q4KJ61|RS18_PSEF5 RecName: Full=30S ribosomal protein S18
gi|259494816|sp|C3KE68|RS18_PSEFS RecName: Full=30S ribosomal protein S18
gi|28855299|gb|AAO58360.1| ribosomal protein S18 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|63254556|gb|AAY35652.1| Ribosomal protein S18 [Pseudomonas syringae pv. syringae B728a]
gi|68348381|gb|AAY95987.1| ribosomal protein S18 [Pseudomonas fluorescens Pf-5]
gi|71555870|gb|AAZ35081.1| ribosomal protein S18 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77380766|gb|ABA72279.1| 30S ribosomal protein S18 [Pseudomonas fluorescens Pf0-1]
gi|213927277|gb|EEB60826.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tomato T1]
gi|229359953|emb|CAY46807.1| 30S ribosomal protein S18 [Pseudomonas fluorescens SBW25]
gi|298160592|gb|EFI01614.1| SSU ribosomal protein S18p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320321873|gb|EFW77969.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331022|gb|EFW86996.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|327375349|gb|AEA66699.1| 30S ribosomal protein S18 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|330865905|gb|EGH00614.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330872264|gb|EGH06413.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330873775|gb|EGH07924.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330886612|gb|EGH20273.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. mori str.
301020]
gi|330899906|gb|EGH31325.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330939890|gb|EGH43112.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. pisi str.
1704B]
gi|330951488|gb|EGH51748.1| 30S ribosomal protein S18 [Pseudomonas syringae Cit 7]
gi|330960078|gb|EGH60338.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330965992|gb|EGH66252.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330971571|gb|EGH71637.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330978936|gb|EGH77995.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330984550|gb|EGH82653.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009772|gb|EGH89828.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331014621|gb|EGH94677.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. lachrymans
str. M302278PT]
gi|331021140|gb|EGI01197.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 76
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 14 TAEDVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|312958664|ref|ZP_07773184.1| 30S ribosomal protein S18 [Pseudomonas fluorescens WH6]
gi|311287207|gb|EFQ65768.1| 30S ribosomal protein S18 [Pseudomonas fluorescens WH6]
Length = 76
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 14 TAEEVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|226365087|ref|YP_002782870.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
gi|226243577|dbj|BAH53925.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
Length = 84
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP+ R + K PL +DYKDI LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 APSKKPRPVEGRKPKKNPLFAAKIEYVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 66 VAVAVKNAREMALLPFTS 83
>gi|296167064|ref|ZP_06849476.1| 30S ribosomal protein S18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897621|gb|EFG77215.1| 30S ribosomal protein S18 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 84
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CVFCAKNDQSIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 IAVKNAREVALLPFTS 81
>gi|257461419|ref|ZP_05626515.1| ribosomal protein S18 [Campylobacter gracilis RM3268]
gi|257441142|gb|EEV16289.1| ribosomal protein S18 [Campylobacter gracilis RM3268]
Length = 86
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MADKRKYTRKYCKFTEAKIEFIDYKDTALLKHCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI Y+
Sbjct: 61 KRARQAALIPYI 72
>gi|298243927|ref|ZP_06967734.1| ribosomal protein S18 [Ktedonobacter racemifer DSM 44963]
gi|297556981|gb|EFH90845.1| ribosomal protein S18 [Ktedonobacter racemifer DSM 44963]
Length = 97
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 19 KSCPLSGKGAPRIDYKDI-RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C IDYKD R + R++S RGKI P R + K QR L+ +IK+ARY+ L
Sbjct: 27 KICQFCHDHVREIDYKDASRFMKRYISDRGKIEPRRKTGTCAKHQRGLSTSIKQARYMAL 86
Query: 78 IAYV 81
+ Y
Sbjct: 87 LPYT 90
>gi|111022580|ref|YP_705552.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|123045681|sp|Q0S4Z2|RS182_RHOSR RecName: Full=30S ribosomal protein S18 2
gi|110822110|gb|ABG97394.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
Length = 84
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP+ R + K PL +DYKDI LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 APSKKPRPVEGRKPKKNPLFAAKIEHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 66 VAVAVKNAREMALLPFTS 83
>gi|291297665|ref|YP_003508943.1| 30S ribosomal protein S18 [Stackebrandtia nassauensis DSM 44728]
gi|290566885|gb|ADD39850.1| ribosomal protein S18 [Stackebrandtia nassauensis DSM 44728]
Length = 79
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++KS PL +G ID+KD LL +F+S RGKI R++ V+ ++QR++A+A+K AR
Sbjct: 8 RKPKKKSNPLDKEGITYIDFKDTALLRKFISDRGKIRARRVTGVTAQQQRQIARAVKNAR 67
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 68 EMALLPYTS 76
>gi|57167956|ref|ZP_00367095.1| ribosomal protein S18 [Campylobacter coli RM2228]
gi|305431894|ref|ZP_07401061.1| 30S ribosomal protein S18 [Campylobacter coli JV20]
gi|57020330|gb|EAL56999.1| ribosomal protein S18 [Campylobacter coli RM2228]
gi|304444978|gb|EFM37624.1| 30S ribosomal protein S18 [Campylobacter coli JV20]
gi|315932207|gb|EFV11150.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 327]
Length = 86
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHVALIPYI 72
>gi|319442737|ref|ZP_07991893.1| 30S ribosomal protein S18 [Corynebacterium variabile DSM 44702]
Length = 83
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M R S R K PL +G +DYKD LL +F+S RGKI R++ ++ +
Sbjct: 1 MKARTNHKKARIEQSRRPKKNPLKAEGIETVDYKDYALLRKFISDRGKIRGRRVTGLTPQ 60
Query: 61 KQRELAKAIKRARYLGLIAY 80
+QR++A A+K AR + L+ +
Sbjct: 61 QQRQVATAVKNAREMALLPF 80
>gi|119952915|ref|YP_945124.1| 30S ribosomal protein S18 [Borrelia turicatae 91E135]
gi|254765411|sp|A1QYR2|RS18_BORT9 RecName: Full=30S ribosomal protein S18
gi|119861686|gb|AAX17454.1| SSU ribosomal protein S18P [Borrelia turicatae 91E135]
Length = 97
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K+C DYK+ L +F++++GKI+P RI+ S K QR LA +K+AR
Sbjct: 28 RFFKKKTCRFC-DMDRVPDYKEFDFLKKFVTEQGKILPRRITGTSAKHQRRLALEVKKAR 86
Query: 74 YLGLIAYV 81
Y+ L+ +V
Sbjct: 87 YMALLPFV 94
>gi|71891875|ref|YP_277604.1| 30S ribosomal protein S18 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123761484|sp|Q493V4|RS18_BLOPB RecName: Full=30S ribosomal protein S18
gi|71795981|gb|AAZ40732.1| 30S ribosomal subunit protein S18 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 79
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RK C + + IDYKD+ + + + GKI+PSRI+ + QR+LA+AIKRA
Sbjct: 7 RFVRHRKFCRFTAEKCINIDYKDLVTIQHSIIESGKIIPSRITGTRARYQRQLARAIKRA 66
Query: 73 RYLGLIAYVN 82
RYL L+ Y +
Sbjct: 67 RYLSLLPYTD 76
>gi|282862689|ref|ZP_06271750.1| ribosomal protein S18 [Streptomyces sp. ACTE]
gi|282562375|gb|EFB67916.1| ribosomal protein S18 [Streptomyces sp. ACTE]
Length = 78
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ RR + + PL G IDYKD LL +F+S RGKI R++ VS ++QR +A A
Sbjct: 1 MTRRTDPRKPRPNPLDAAGITYIDYKDTDLLRKFVSDRGKIRSRRVTRVSARQQRHIATA 60
Query: 69 IKRARYLGLIA 79
+K AR + L+
Sbjct: 61 VKNAREMALLP 71
>gi|240168786|ref|ZP_04747445.1| 30S ribosomal protein S18 [Mycobacterium kansasii ATCC 12478]
Length = 84
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K +IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKARK--CVFCAKKDQKIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 TAVKNAREVALLPFTS 81
>gi|172040219|ref|YP_001799933.1| 30S ribosomal protein S18 [Corynebacterium urealyticum DSM 7109]
gi|229559980|sp|B1VFG0|RS18_CORU7 RecName: Full=30S ribosomal protein S18
gi|171851523|emb|CAQ04499.1| 30S ribosomal protein S18 [Corynebacterium urealyticum DSM 7109]
Length = 82
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL +G ++DYK+ LL +F+S RGKI R++ ++ ++QRE+A AIK
Sbjct: 10 RMEQSRRPKKNPLKAEGIEQVDYKNYALLRKFISDRGKIRSRRVTGLTPQQQREVATAIK 69
Query: 71 RARYLGLIAY 80
AR + L+ +
Sbjct: 70 NAREMALLPF 79
>gi|330723815|gb|AEC46185.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis MCLD]
Length = 80
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C IDYK++ +L +F++ GKI PSRI+ K QR+++ AIKRAR + L+A+
Sbjct: 14 CHFCETQTVYIDYKNVEVLEKFVNPHGKIQPSRITGSCSKHQRQVSLAIKRARMIALMAF 73
Query: 81 VN 82
V
Sbjct: 74 VG 75
>gi|238809826|dbj|BAH69616.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 97
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ + RR+ C + +DYKD+ L++F++ G+I P + K QR++A AIK
Sbjct: 19 KKKNNFRRRRCETCDQKLTYVDYKDVEFLSKFITATGQIKPHSATGACAKDQRKIANAIK 78
Query: 71 RARYLGLIAY 80
RAR++ LI Y
Sbjct: 79 RARFMALIPY 88
>gi|237785093|ref|YP_002905798.1| 30S ribosomal protein S18 [Corynebacterium kroppenstedtii DSM
44385]
gi|259494804|sp|C4LHF0|RS18_CORK4 RecName: Full=30S ribosomal protein S18
gi|237758005|gb|ACR17255.1| 30S ribosomal protein S18 [Corynebacterium kroppenstedtii DSM
44385]
Length = 82
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ +R + R K PL +G +DYKDI L F+S+RGKI R++ ++ ++QR+
Sbjct: 4 NNSKKVRVEPTRRPKKNPLKARGIEAVDYKDIETLRTFISERGKIRSRRVTGLTPQQQRQ 63
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ + +
Sbjct: 64 VATAVKNAREMALLPFTS 81
>gi|268316170|ref|YP_003289889.1| 30S ribosomal protein S18 [Rhodothermus marinus DSM 4252]
gi|262333704|gb|ACY47501.1| ribosomal protein S18 [Rhodothermus marinus DSM 4252]
Length = 65
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ +DYKD+ L +F++++GKI+P RI+ VS K QR++A+AIKRAR+L L+ +V
Sbjct: 4 KRDLEYVDYKDVEFLKQFINEQGKILPRRITGVSAKTQRQIARAIKRARHLALLPFV 60
>gi|289672603|ref|ZP_06493493.1| 30S ribosomal protein S18 [Pseudomonas syringae pv. syringae FF5]
Length = 76
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDYKD+ L ++S+ GKIVPSRI+ + QR+LA AIKRAR+L L+AY +
Sbjct: 14 TAEDVKEIDYKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLAYTD 72
>gi|195536238|ref|ZP_03079245.1| ribosomal protein S18 [Francisella tularensis subsp. novicida
FTE]
gi|208779341|ref|ZP_03246687.1| ribosomal protein S18 [Francisella novicida FTG]
gi|194372715|gb|EDX27426.1| ribosomal protein S18 [Francisella tularensis subsp. novicida
FTE]
gi|208745141|gb|EDZ91439.1| ribosomal protein S18 [Francisella novicida FTG]
Length = 59
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L ++++ GKIVPSR++ S K QR+LA AIKRAR+L L+ Y +
Sbjct: 2 KEIDYKDVNKLKAYITETGKIVPSRVTGTSAKYQRQLATAIKRARFLALLPYCD 55
>gi|160871730|ref|ZP_02061862.1| ribosomal protein S18 [Rickettsiella grylli]
gi|159120529|gb|EDP45867.1| ribosomal protein S18 [Rickettsiella grylli]
Length = 78
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RRK C +S +G +DYKD+ LL L++ KIVPSR + + QR+L +AI
Sbjct: 1 MNNYQTRRRKHCRISAEGME-VDYKDLALLKSHLTETAKIVPSRTTGTTACVQRKLTQAI 59
Query: 70 KRARYLGLIAYVN 82
KRAR+LGL+ Y +
Sbjct: 60 KRARFLGLLPYCD 72
>gi|261749385|ref|YP_003257070.1| 30S ribosomal protein S18 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497477|gb|ACX83927.1| ribosomal protein S18 [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 106
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
L+ +K C + IDYKD L +FL+ +GKI+P RI+ K Q +L AI
Sbjct: 30 LKIETKIEKKYCYFKQRNIKYIDYKDPIFLIKFLNAQGKILPRRITGTLQKNQNKLNAAI 89
Query: 70 KRARYLGLIAYVN 82
KR R +GL+ +V
Sbjct: 90 KRCRQIGLLPFVT 102
>gi|284929339|ref|YP_003421861.1| 30S ribosomal protein S18P [cyanobacterium UCYN-A]
gi|284809783|gb|ADB95480.1| SSU ribosomal protein S18P [cyanobacterium UCYN-A]
Length = 71
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR
Sbjct: 3 YYRKRLSPIPPK--QPIDYKDTELLRKFITERGKILPRRITGLTAKQQRALTTAVKRARI 60
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 61 LALLPFVN 68
>gi|172038260|ref|YP_001804761.1| 30S ribosomal protein S18 [Cyanothece sp. ATCC 51142]
gi|171699714|gb|ACB52695.1| 30S ribosomal protein S18 [Cyanothece sp. ATCC 51142]
Length = 71
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+
Sbjct: 3 YYRKRLSPIPPK--QPIDYKDTELLRKFITERGKILPRRITGLTAKQQRALTSAVKRARF 60
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 61 LALLPFVN 68
>gi|111020419|ref|YP_703391.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|226362637|ref|YP_002780415.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
gi|123340397|sp|Q0SB53|RS181_RHOSR RecName: Full=30S ribosomal protein S18 1
gi|110819949|gb|ABG95233.1| 30S ribosomal protein S18 [Rhodococcus jostii RHA1]
gi|226241122|dbj|BAH51470.1| 30S ribosomal protein S18 [Rhodococcus opacus B4]
Length = 80
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P LR V ++K C + +I+YKD LL +++S RGKI R++ + QR++
Sbjct: 2 PKPPLRDKVM-KKKICIFCKEKNTQINYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDV 60
Query: 66 AKAIKRARYLGLIAYVNL 83
A A+K +R + L+ Y +
Sbjct: 61 AIAVKNSREVALLPYATV 78
>gi|262204542|ref|YP_003275750.1| 30S ribosomal protein S18 [Gordonia bronchialis DSM 43247]
gi|262087889|gb|ACY23857.1| ribosomal protein S18 [Gordonia bronchialis DSM 43247]
Length = 85
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA+ + R + K+C IDYKD LL RFLS RGKI R++ +
Sbjct: 1 MAKAKASRKPRVEKVTKTKACSFCKDKKAVIDYKDTALLRRFLSDRGKIRSRRVTGNCVQ 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR++A A+K +R + L+ + +
Sbjct: 61 HQRDVAVAVKNSREVALLPFTS 82
>gi|311742122|ref|ZP_07715932.1| 30S ribosomal protein S18 [Aeromicrobium marinum DSM 15272]
gi|311314615|gb|EFQ84522.1| 30S ribosomal protein S18 [Aeromicrobium marinum DSM 15272]
Length = 78
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P++R+ ++KS PL+ G IDYKD LL +F+S RGKI R++ VS ++QR +A
Sbjct: 3 KPVIRKP---KKKSNPLAVAGVTTIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIA 59
Query: 67 KAIKRARYLGLIAYVN 82
KAIK AR + L+ Y +
Sbjct: 60 KAIKNAREMALLPYTS 75
>gi|15839432|ref|NP_334469.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31791232|ref|NP_853725.1| 30S ribosomal protein S18 [Mycobacterium bovis AF2122/97]
gi|57116686|ref|YP_177688.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Rv]
gi|121635965|ref|YP_976188.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659815|ref|YP_001281338.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148821245|ref|YP_001285999.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis F11]
gi|167970581|ref|ZP_02552858.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|215406045|ref|ZP_03418226.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 02_1987]
gi|215413916|ref|ZP_03422578.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 94_M4241A]
gi|215425250|ref|ZP_03423169.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T92]
gi|215432964|ref|ZP_03430883.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|215448331|ref|ZP_03435083.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|218755778|ref|ZP_03534574.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis GM 1503]
gi|219555834|ref|ZP_03534910.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T17]
gi|224988438|ref|YP_002643105.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253796970|ref|YP_003029971.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis KZN
1435]
gi|254233454|ref|ZP_04926780.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis C]
gi|254366513|ref|ZP_04982557.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
str. Haarlem]
gi|254548987|ref|ZP_05139434.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184911|ref|ZP_05762385.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CPHL_A]
gi|260199048|ref|ZP_05766539.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|260203196|ref|ZP_05770687.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis K85]
gi|289441422|ref|ZP_06431166.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289445581|ref|ZP_06435325.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis CPHL_A]
gi|289552304|ref|ZP_06441514.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 605]
gi|289567941|ref|ZP_06448168.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis T17]
gi|289572631|ref|ZP_06452858.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis K85]
gi|289747824|ref|ZP_06507202.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis 02_1987]
gi|289748521|ref|ZP_06507899.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis T92]
gi|289756114|ref|ZP_06515492.1| rpsR [Mycobacterium tuberculosis EAS054]
gi|289760153|ref|ZP_06519531.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289764169|ref|ZP_06523547.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis GM 1503]
gi|294995671|ref|ZP_06801362.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 210]
gi|297632526|ref|ZP_06950306.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN 4207]
gi|297729497|ref|ZP_06958615.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN R506]
gi|298527453|ref|ZP_07014862.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis
94_M4241A]
gi|306778346|ref|ZP_07416683.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu001]
gi|306778877|ref|ZP_07417214.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu002]
gi|306782666|ref|ZP_07420988.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu003]
gi|306787032|ref|ZP_07425354.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu004]
gi|306791590|ref|ZP_07429892.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu005]
gi|306795653|ref|ZP_07433955.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu006]
gi|306801628|ref|ZP_07438296.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu008]
gi|306805837|ref|ZP_07442505.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu007]
gi|306970234|ref|ZP_07482895.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu009]
gi|306974467|ref|ZP_07487128.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu010]
gi|307082175|ref|ZP_07491345.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu011]
gi|313656826|ref|ZP_07813706.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN V2475]
gi|59800210|sp|P69230|RS181_MYCTU RecName: Full=30S ribosomal protein S18 1
gi|59800211|sp|P69231|RS181_MYCBO RecName: Full=30S ribosomal protein S18 1
gi|205556364|sp|A1KEM3|RS181_MYCBP RecName: Full=30S ribosomal protein S18 1
gi|205556406|sp|A5TYC6|RS181_MYCTA RecName: Full=30S ribosomal protein S18 1
gi|13879104|gb|AAK44283.1| ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31616817|emb|CAD92918.1| PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 [Mycobacterium bovis
AF2122/97]
gi|41352727|emb|CAE55237.1| PROBABLE 30S RIBOSOMAL PROTEIN S18-1 RPSR1 [Mycobacterium
tuberculosis H37Rv]
gi|121491612|emb|CAL70070.1| Probable 30s ribosomal protein s18-1 rpsR1 [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124603247|gb|EAY61522.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis C]
gi|134152025|gb|EBA44070.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
str. Haarlem]
gi|148503967|gb|ABQ71776.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148719772|gb|ABR04397.1| 30S ribosomal protein S18-1 rpsR1 [Mycobacterium tuberculosis
F11]
gi|224771551|dbj|BAH24357.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253318473|gb|ACT23076.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis KZN
1435]
gi|289414341|gb|EFD11581.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289418539|gb|EFD15740.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis CPHL_A]
gi|289436936|gb|EFD19429.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 605]
gi|289537062|gb|EFD41640.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis K85]
gi|289541694|gb|EFD45343.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis T17]
gi|289688352|gb|EFD55840.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis 02_1987]
gi|289689108|gb|EFD56537.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis T92]
gi|289696701|gb|EFD64130.1| rpsR [Mycobacterium tuberculosis EAS054]
gi|289711675|gb|EFD75691.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis GM 1503]
gi|289715717|gb|EFD79729.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298497247|gb|EFI32541.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis
94_M4241A]
gi|308213489|gb|EFO72888.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu001]
gi|308328206|gb|EFP17057.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu002]
gi|308332512|gb|EFP21363.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu003]
gi|308336324|gb|EFP25175.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu004]
gi|308339927|gb|EFP28778.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu005]
gi|308343943|gb|EFP32794.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu006]
gi|308347726|gb|EFP36577.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu007]
gi|308351643|gb|EFP40494.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu008]
gi|308352350|gb|EFP41201.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu009]
gi|308356250|gb|EFP45101.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu010]
gi|308360241|gb|EFP49092.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
SUMu011]
gi|323717394|gb|EGB26599.1| 30S ribosomal protein S18 rpsR1 [Mycobacterium tuberculosis
CDC1551A]
gi|326905815|gb|EGE52748.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis W-148]
gi|328456760|gb|AEB02183.1| 30S ribosomal protein rpsR1 [Mycobacterium tuberculosis KZN 4207]
Length = 84
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 LAVKNAREVALLPFTS 81
>gi|84517318|ref|ZP_01004672.1| 30S ribosomal protein S18 [Loktanella vestfoldensis SKA53]
gi|84508798|gb|EAQ05261.1| 30S ribosomal protein S18 [Loktanella vestfoldensis SKA53]
Length = 75
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RRKS P G AP+IDYKD R L R++S+RGKIVP+RI++V K QR LA+A
Sbjct: 1 MATKPFFRRRKSDPFEGTDAPKIDYKDTRTLQRYISERGKIVPARITAVGSKNQRALARA 60
Query: 69 IKRARYLGLIAY 80
IKRAR+L L+ Y
Sbjct: 61 IKRARFLALLPY 72
>gi|302330353|gb|ADL20547.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
1002]
Length = 72
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K AR
Sbjct: 4 SRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVKNARE 63
Query: 75 LGLIAYVN 82
+ L+ + +
Sbjct: 64 MALLPFTS 71
>gi|57237954|ref|YP_179203.1| 30S ribosomal protein S18 [Campylobacter jejuni RM1221]
gi|86150494|ref|ZP_01068719.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86150979|ref|ZP_01069195.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153056|ref|ZP_01071261.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88596231|ref|ZP_01099468.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613108|ref|YP_001000750.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926025|ref|ZP_01809711.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|153951708|ref|YP_001397812.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415333|ref|YP_001482589.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81116]
gi|167005670|ref|ZP_02271428.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81-176]
gi|218562686|ref|YP_002344465.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|283954635|ref|ZP_06372153.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 414]
gi|283956469|ref|ZP_06373949.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
1336]
gi|6226083|sp|O69301|RS18_CAMJE RecName: Full=30S ribosomal protein S18
gi|81675575|sp|Q5HU32|RS18_CAMJR RecName: Full=30S ribosomal protein S18
gi|166220940|sp|A7H2T2|RS18_CAMJD RecName: Full=30S ribosomal protein S18
gi|166220941|sp|A1W059|RS18_CAMJJ RecName: Full=30S ribosomal protein S18
gi|172047141|sp|A8FMC5|RS18_CAMJ8 RecName: Full=30S ribosomal protein S18
gi|3114757|emb|CAA76673.1| ribosomal protein S18 [Campylobacter jejuni]
gi|57166758|gb|AAW35537.1| ribosomal protein S18 [Campylobacter jejuni RM1221]
gi|85839089|gb|EAQ56353.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85842149|gb|EAQ59395.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843941|gb|EAQ61151.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249144|gb|EAQ72105.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191072|gb|EAQ95044.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360392|emb|CAL35189.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145845504|gb|EDK22596.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|152939154|gb|ABS43895.1| ribosomal protein S18 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386297|gb|ABV52612.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792189|gb|EFC30978.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
1336]
gi|283793827|gb|EFC32578.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 414]
gi|284926301|gb|ADC28653.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307747974|gb|ADN91244.1| 30S ribosomal protein S18 [Campylobacter jejuni subsp. jejuni M1]
gi|315058513|gb|ADT72842.1| SSU ribosomal protein S18p [Campylobacter jejuni subsp. jejuni
S3]
gi|315927920|gb|EFV07242.1| Ribosomal protein S18 [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928748|gb|EFV08023.1| ribosomal protein S18 [Campylobacter jejuni subsp. jejuni 305]
Length = 86
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHVALIPYI 72
>gi|296118271|ref|ZP_06836852.1| ribosomal protein S18 [Corynebacterium ammoniagenes DSM 20306]
gi|295968829|gb|EFG82073.1| ribosomal protein S18 [Corynebacterium ammoniagenes DSM 20306]
Length = 82
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
R + R K PL +G ++DYKD + L F+S RGKI R++ ++ ++QR+
Sbjct: 4 NNQKKFRMEQTRRPKKNPLKAEGIEKVDYKDTKTLRLFISDRGKIRSRRVTGLTPQQQRQ 63
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ +
Sbjct: 64 VATAVKNAREMALLPFTT 81
>gi|159027933|emb|CAO87096.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 71
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+S IDYKD LL +F+++RGK++P RI+ ++ K+QR+L +A+KRAR
Sbjct: 3 YYRKRLSPISPS--QPIDYKDTELLRKFITERGKLLPRRITGLTSKQQRDLTEAVKRARL 60
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 61 MALLPFVN 68
>gi|256826412|ref|YP_003150372.1| 30S ribosomal protein S18 [Kytococcus sedentarius DSM 20547]
gi|256689805|gb|ACV07607.1| SSU ribosomal protein S18P [Kytococcus sedentarius DSM 20547]
Length = 81
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++R ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A
Sbjct: 3 KSVVRNPKPVKKKANPLKAAKVEKIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIA 62
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 63 KAVKNAREMALLPYSS 78
>gi|126660661|ref|ZP_01731762.1| 30S ribosomal protein S18 [Cyanothece sp. CCY0110]
gi|126618054|gb|EAZ88822.1| 30S ribosomal protein S18 [Cyanothece sp. CCY0110]
Length = 71
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ K IDYKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+
Sbjct: 3 YYRKRLSPIPPK--QPIDYKDTELLRKFITERGKILPRRITGLTAKQQRALTAAVKRARF 60
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 61 LALLPFVN 68
>gi|41406167|ref|NP_959003.1| 30S ribosomal protein S18 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466677|ref|YP_879375.1| 30S ribosomal protein S18 [Mycobacterium avium 104]
gi|254773122|ref|ZP_05214638.1| 30S ribosomal protein S18 [Mycobacterium avium subsp. avium ATCC
25291]
gi|254818591|ref|ZP_05223592.1| 30S ribosomal protein S18 [Mycobacterium intracellulare ATCC
13950]
gi|59798951|sp|Q744X6|RS181_MYCPA RecName: Full=30S ribosomal protein S18 1
gi|166220960|sp|A0Q8Y7|RS18_MYCA1 RecName: Full=30S ribosomal protein S18
gi|41394515|gb|AAS02386.1| RpsR [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167964|gb|ABK68861.1| ribosomal protein S18 [Mycobacterium avium 104]
Length = 84
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKARK--CVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 IAVKNAREVALLPFTS 81
>gi|300858072|ref|YP_003783055.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685526|gb|ADK28448.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
FRC41]
Length = 82
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K
Sbjct: 10 RMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVK 69
Query: 71 RARYLGLIAYVN 82
AR + L+ + +
Sbjct: 70 NAREMALLPFTS 81
>gi|118615985|ref|YP_904317.1| 30S ribosomal protein S18 [Mycobacterium ulcerans Agy99]
gi|183980109|ref|YP_001848400.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium marinum M]
gi|205556387|sp|B2HIB9|RS181_MYCMM RecName: Full=30S ribosomal protein S18 1
gi|205556430|sp|A0PKH7|RS181_MYCUA RecName: Full=30S ribosomal protein S18 1
gi|118568095|gb|ABL02846.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium ulcerans Agy99]
gi|183173435|gb|ACC38545.1| 30S ribosomal protein S18-1 RpsR1 [Mycobacterium marinum M]
Length = 84
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CVFCAKKDQAIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 LAVKNAREVALLPFTS 81
>gi|312144682|ref|YP_003996128.1| ribosomal protein S18 [Halanaerobium sp. 'sapolanicus']
gi|311905333|gb|ADQ15774.1| ribosomal protein S18 [Halanaerobium sp. 'sapolanicus']
Length = 70
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R KSC G IDYKD+R L R+L+ RGKI+P R + K QR++ A+KRAR +
Sbjct: 5 RNKSCHFCGSD-KTIDYKDLRTLKRYLTDRGKIMPRRTTGNCSKHQRDITIAVKRARAIA 63
Query: 77 LIAYV 81
L+ YV
Sbjct: 64 LLPYV 68
>gi|15829080|ref|NP_326440.1| 30S ribosomal protein S18 [Mycoplasma pulmonis UAB CTIP]
gi|20978725|sp|Q98PW0|RS18_MYCPU RecName: Full=30S ribosomal protein S18
gi|14090024|emb|CAC13782.1| 30S RIBOSOMAL PROTEIN S18 [Mycoplasma pulmonis]
Length = 105
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
L +G IDYKD+ LL++F++ GKI+PS+I+ VS K+QR L +AIKRAR + L+
Sbjct: 17 VSFLDEQGINYIDYKDVELLSKFINSHGKILPSKITDVSAKRQRMLTRAIKRARNMALLP 76
Query: 80 YV 81
+
Sbjct: 77 FT 78
>gi|227487780|ref|ZP_03918096.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227542421|ref|ZP_03972470.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092282|gb|EEI27594.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181619|gb|EEI62591.1| 30S ribosomal protein S18 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 82
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL G ++DYKD+ L +F+S RGKI R++ ++ ++QR++A A+K
Sbjct: 10 RIEQSRRPKKNPLKAAGIEKVDYKDLNTLRQFISDRGKIRSRRVTGLTPRQQRQVATAVK 69
Query: 71 RARYLGLIAYVN 82
AR + L+ + +
Sbjct: 70 NAREMALLPFTS 81
>gi|254417640|ref|ZP_05031374.1| ribosomal protein S18 [Microcoleus chthonoplastes PCC 7420]
gi|196175558|gb|EDX70588.1| ribosomal protein S18 [Microcoleus chthonoplastes PCC 7420]
Length = 71
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
R++ P+ IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR L ++IKRAR
Sbjct: 2 TYFRKRLSPIK--PGEPIDYKDVELLRKFITERGKILPRRITGLTSQQQRALTRSIKRAR 59
Query: 74 YLGLIAYVN 82
L L+ +VN
Sbjct: 60 LLALLPFVN 68
>gi|300932564|ref|ZP_07147820.1| 30S ribosomal protein S18 [Corynebacterium resistens DSM 45100]
Length = 82
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL +G +DYK+ LL +F+S RGKI R++ ++ ++QR++A A+K
Sbjct: 10 RMEQSRRPKKNPLKAEGIETVDYKNYALLRKFISDRGKIRSRRVTGLTPQQQRQVATAVK 69
Query: 71 RARYLGLIAY 80
AR + L+ +
Sbjct: 70 NAREMALLPF 79
>gi|256381019|ref|YP_003104679.1| 30S ribosomal protein S18 [Actinosynnema mirum DSM 43827]
gi|255925322|gb|ACU40833.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
Length = 79
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C IDYKD LL +++S RGKI R++ + QR++A A+K AR + L+
Sbjct: 14 CAFCKDKNANLIDYKDTTLLRKYISDRGKIRARRVTGNCSQHQRDVAVAVKNAREMALLP 73
Query: 80 YVN 82
Y +
Sbjct: 74 YTS 76
>gi|182434342|ref|YP_001822061.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|205556519|sp|B1VRG0|RS181_STRGG RecName: Full=30S ribosomal protein S18 1
gi|113208307|dbj|BAF03512.1| putative ribosomal protein S18 [Streptomyces griseus]
gi|178462858|dbj|BAG17378.1| putative 30S ribosomal protein S18 [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 82
Score = 99 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 10 LRRNVSHRR----KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+ R R+ + PL IDYKD LL RF+S RGKI R++ +S ++QR++
Sbjct: 1 MARQQEPRKPFKSRPNPLDAAEITYIDYKDTDLLRRFVSDRGKIRGRRVTRISARQQRQV 60
Query: 66 AKAIKRARYLGLIAYVN 82
A AIK AR + L+ Y
Sbjct: 61 AAAIKNAREMALLPYTG 77
>gi|148377544|ref|YP_001256420.1| 30S ribosomal protein S18 [Mycoplasma agalactiae PG2]
gi|205558356|sp|A5IY67|RS18_MYCAP RecName: Full=30S ribosomal protein S18
gi|148291590|emb|CAL58976.1| 30S ribosomal protein S18 [Mycoplasma agalactiae PG2]
Length = 107
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A +++ + RRK C L +DYK++ + +F+S G+I P + + QR
Sbjct: 1 MANFKKVKKGRNLRRK-CELCETNIEYVDYKNVEFITKFISGIGQIKPHVSTGTCARHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
++A AIKRAR++ LI Y
Sbjct: 60 KVANAIKRARFMALIPYT 77
>gi|170077198|ref|YP_001733836.1| 30S ribosomal protein S18 [Synechococcus sp. PCC 7002]
gi|169884867|gb|ACA98580.1| ribosomal protein S18 [Synechococcus sp. PCC 7002]
Length = 71
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ + IDYKD+ LL +F+++RGKI+P RI+ ++ ++QR++ AIKRAR
Sbjct: 3 YYRKRLSPI--PPSQPIDYKDVELLRKFITERGKILPRRITGLTARQQRDVNTAIKRARM 60
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 61 LALLPFIN 68
>gi|148269458|ref|YP_001243918.1| 30S ribosomal protein S18 [Thermotoga petrophila RKU-1]
gi|281411824|ref|YP_003345903.1| ribosomal protein S18 [Thermotoga naphthophila RKU-10]
gi|166222254|sp|A5IJG9|RS18_THEP1 RecName: Full=30S ribosomal protein S18
gi|147735002|gb|ABQ46342.1| SSU ribosomal protein S18P [Thermotoga petrophila RKU-1]
gi|281372927|gb|ADA66489.1| ribosomal protein S18 [Thermotoga naphthophila RKU-10]
Length = 75
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L +DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+
Sbjct: 15 LCEMELDYVDYKDTRLLSEFLTDKGKIIPKRLTGNCSKHQRMVKVAIKRARQMGLLPYLK 74
Query: 83 L 83
+
Sbjct: 75 I 75
>gi|15643371|ref|NP_228415.1| 30S ribosomal protein S18 [Thermotoga maritima MSB8]
gi|7388156|sp|Q9WZ74|RS18_THEMA RecName: Full=30S ribosomal protein S18
gi|4981125|gb|AAD35690.1|AE001735_3 ribosomal protein S18 [Thermotoga maritima MSB8]
Length = 75
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L +DYKD RLL+ FL+ +GKI+P R++ K QR + AIKRAR +GL+ Y+
Sbjct: 15 LCEMKLDYVDYKDTRLLSEFLTDKGKIIPKRLTGNCSKHQRMVKVAIKRARQMGLLPYLK 74
Query: 83 L 83
+
Sbjct: 75 I 75
>gi|313679095|ref|YP_004056834.1| SSU ribosomal protein s18p [Oceanithermus profundus DSM 14977]
gi|313151810|gb|ADR35661.1| SSU ribosomal protein S18P [Oceanithermus profundus DSM 14977]
Length = 84
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C DYKD ++L RF+S+ GKI+P R + V K QR LA IKRAR L +I
Sbjct: 16 KVCQFCTGELEITDYKDAKMLKRFISETGKILPRRRTGVCAKHQRRLATTIKRARILAII 75
Query: 79 AYVN 82
+
Sbjct: 76 PFTE 79
>gi|297572323|ref|YP_003698097.1| ribosomal protein S18 [Arcanobacterium haemolyticum DSM 20595]
gi|296932670|gb|ADH93478.1| ribosomal protein S18 [Arcanobacterium haemolyticum DSM 20595]
Length = 78
Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+LR+ ++KS PL +DYKD L +F+S RGKI R++ V+ ++QR++A
Sbjct: 3 KPVLRKP---KKKSNPLKAAKIEVVDYKDTATLRKFISDRGKIRSRRVTGVTVQEQRQIA 59
Query: 67 KAIKRARYLGLIAYVN 82
+A+K AR + L+ Y +
Sbjct: 60 RAVKNAREMALLPYTS 75
>gi|190571062|ref|YP_001975420.1| ribosomal protein S18 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357334|emb|CAQ54764.1| ribosomal protein S18 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 91
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R R K CPL+ IDYK+I LL++F S G+I+P R++ V +KQR+L AI
Sbjct: 16 NRTGFRRPKVCPLAASKDEDIDYKNIDLLSKFTSDYGRILPRRLTGVCARKQRKLRLAII 75
Query: 71 RARYLGLIAYVN 82
RAR+L L Y
Sbjct: 76 RARFLALAPYCT 87
>gi|225023067|ref|ZP_03712259.1| hypothetical protein CORMATOL_03115 [Corynebacterium matruchotii
ATCC 33806]
gi|305681805|ref|ZP_07404609.1| ribosomal protein S18 [Corynebacterium matruchotii ATCC 14266]
gi|224944290|gb|EEG25499.1| hypothetical protein CORMATOL_03115 [Corynebacterium matruchotii
ATCC 33806]
gi|305658278|gb|EFM47781.1| ribosomal protein S18 [Corynebacterium matruchotii ATCC 14266]
Length = 82
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
T +R S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A
Sbjct: 6 TKKVRMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 TAVKNAREMALLPFTS 81
>gi|303232318|ref|ZP_07319013.1| ribosomal protein S18 [Atopobium vaginae PB189-T1-4]
gi|302481575|gb|EFL44640.1| ribosomal protein S18 [Atopobium vaginae PB189-T1-4]
Length = 90
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RK L +DYKD +LL +F++ RGKI P R++ + + Q +A AIKRAR + L
Sbjct: 14 RKYSQLDKAELDNVDYKDTQLLRKFMTDRGKIKPRRVTGICTQHQHNVAMAIKRAREMAL 73
Query: 78 IAYV 81
+ Y
Sbjct: 74 LPYT 77
>gi|262341104|ref|YP_003283959.1| 30S ribosomal protein S18 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272441|gb|ACY40349.1| 30S ribosomal protein S18 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 101
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
++ +K C + IDYKD L +FL+ +GKI+P RI+ K Q +L AI
Sbjct: 25 IKIETKVEKKYCYFEQRNIKYIDYKDPIFLIKFLNAQGKILPRRITGTLQKNQNKLNAAI 84
Query: 70 KRARYLGLIAYVN 82
KR R +GL+ +V
Sbjct: 85 KRCRQIGLLPFVT 97
>gi|291515311|emb|CBK64521.1| SSU ribosomal protein S18P [Alistipes shahii WAL 8301]
Length = 92
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIKYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFVT 88
>gi|118470101|ref|YP_891095.1| 30S ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
gi|205556579|sp|A0R7F7|RS182_MYCS2 RecName: Full=30S ribosomal protein S18 2
gi|118171388|gb|ABK72284.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
Length = 84
Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CVFCSKKGQTIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAY 80
A+K AR + L+ +
Sbjct: 66 VAVKNAREVALLPF 79
>gi|108802327|ref|YP_642524.1| 30S ribosomal protein S18 [Mycobacterium sp. MCS]
gi|119871480|ref|YP_941432.1| 30S ribosomal protein S18 [Mycobacterium sp. KMS]
gi|126438307|ref|YP_001073998.1| 30S ribosomal protein S18 [Mycobacterium sp. JLS]
gi|123177801|sp|Q1B0W6|RS18_MYCSS RecName: Full=30S ribosomal protein S18
gi|166220961|sp|A3Q8N0|RS18_MYCSJ RecName: Full=30S ribosomal protein S18
gi|166220962|sp|A1UP84|RS18_MYCSK RecName: Full=30S ribosomal protein S18
gi|108772746|gb|ABG11468.1| SSU ribosomal protein S18P [Mycobacterium sp. MCS]
gi|119697569|gb|ABL94642.1| SSU ribosomal protein S18P [Mycobacterium sp. KMS]
gi|126238107|gb|ABO01508.1| SSU ribosomal protein S18P [Mycobacterium sp. JLS]
Length = 84
Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CVFCSKKGQDIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAY 80
A+K AR + L+ +
Sbjct: 66 VAVKNAREVALLPF 79
>gi|57242167|ref|ZP_00370107.1| ribosomal protein S18 [Campylobacter upsaliensis RM3195]
gi|315638121|ref|ZP_07893304.1| 30S ribosomal protein S18 [Campylobacter upsaliensis JV21]
gi|57017359|gb|EAL54140.1| ribosomal protein S18 [Campylobacter upsaliensis RM3195]
gi|315481801|gb|EFU72422.1| 30S ribosomal protein S18 [Campylobacter upsaliensis JV21]
Length = 86
Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRLTGTSKKYQEMVELAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHVALIPYI 72
>gi|149071994|ref|YP_001293556.1| ribosomal protein S18 [Rhodomonas salina]
gi|205831411|sp|A6MVX7|RR18_RHDSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134302945|gb|ABO70749.1| ribosomal protein S18 [Rhodomonas salina]
Length = 73
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RRK+ P+ IDYKD+ LL+ FL+++GKI+P R++ +++K+Q ++ KAIKRAR L
Sbjct: 4 YRRKASPIKI--GDAIDYKDVELLSNFLTEQGKILPKRLTGLTNKQQNKVTKAIKRARML 61
Query: 76 GLIAYVN 82
L+ +VN
Sbjct: 62 SLLPFVN 68
>gi|237750845|ref|ZP_04581325.1| 30S ribosomal protein S18 [Helicobacter bilis ATCC 43879]
gi|229373290|gb|EEO23681.1| 30S ribosomal protein S18 [Helicobacter bilis ATCC 43879]
Length = 84
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ S ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + A
Sbjct: 1 MERKKYS--KRYCKYTEAKIDFIDYKDVELLKHSLSERYKIMPRRLTGNSKKWQERVEVA 58
Query: 69 IKRARYLGLIAYV 81
IKRAR++ LI YV
Sbjct: 59 IKRARHMALIPYV 71
>gi|226307893|ref|YP_002767853.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229495114|ref|ZP_04388860.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
gi|226187010|dbj|BAH35114.1| 30S ribosomal protein S18 [Rhodococcus erythropolis PR4]
gi|229318045|gb|EEN83920.1| ribosomal protein S18 [Rhodococcus erythropolis SK121]
Length = 85
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+P+ R + K PL +DYKDI LL F+S RGKI R++ ++ ++QR+
Sbjct: 6 SPSKKPRPVEGRKPKKNPLFAAKITHVDYKDINLLRTFISDRGKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYV 81
+A A+K AR + L+ +
Sbjct: 66 VAVAVKNAREMALLPFT 82
>gi|88606855|ref|YP_504776.1| 30S ribosomal protein S18 [Anaplasma phagocytophilum HZ]
gi|123736454|sp|Q2GLH5|RS18_ANAPZ RecName: Full=30S ribosomal protein S18
gi|88597918|gb|ABD43388.1| ribosomal protein S18 [Anaplasma phagocytophilum HZ]
Length = 96
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+ L
Sbjct: 21 PLVYLKRPYFRKSRSCPLAQCPDEDIDYKNKVLLSKFVSEYGRILPSRITSVSARKQKLL 80
Query: 66 AKAIKRARYLGLIAYV 81
A+AIKRARYL L+ Y
Sbjct: 81 ARAIKRARYLALLPYC 96
>gi|47459060|ref|YP_015922.1| 30S ribosomal protein S18 [Mycoplasma mobile 163K]
gi|59798718|sp|Q6KI65|RS18_MYCMO RecName: Full=30S ribosomal protein S18
gi|47458389|gb|AAT27711.1| 30S ribosomal protein s18 [Mycoplasma mobile 163K]
Length = 84
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ N + K C + IDYKD+ L++++++ GKI+ S+I+ K QR ++ IK
Sbjct: 8 KSNRIFKPKPCFFHVEKIKYIDYKDVELVSKYINNHGKILSSKITGNCAKHQRLISNVIK 67
Query: 71 RARYLGLIAYVN 82
RAR + LI +++
Sbjct: 68 RARIMALIPFIS 79
>gi|293363239|ref|ZP_06610123.1| ribosomal protein S18 [Mycoplasma alligatoris A21JP2]
gi|292553098|gb|EFF41847.1| ribosomal protein S18 [Mycoplasma alligatoris A21JP2]
Length = 85
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ C IDYKD+ L R+++ G+I P S K QR+++ AIKRAR + +
Sbjct: 15 RVCEFCENSVLYIDYKDVETLKRYVNATGQIKPKANSGACAKHQRKVSTAIKRARQIAFM 74
Query: 79 AYV 81
Y
Sbjct: 75 PYT 77
>gi|149918391|ref|ZP_01906881.1| ribosomal protein S18 [Plesiocystis pacifica SIR-1]
gi|149820691|gb|EDM80101.1| ribosomal protein S18 [Plesiocystis pacifica SIR-1]
Length = 82
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ +LL FL++RGK++P+RI+ VS ++QR + KAIKRAR L L+ Y
Sbjct: 24 ADPNVVIDYKNPQLLKHFLTERGKVIPARITGVSARQQRAITKAIKRARQLALLPYT 80
>gi|193216922|ref|YP_002000164.1| ribosomal protein S18 [Mycoplasma arthritidis 158L3-1]
gi|226735122|sp|B3PN58|RS18_MYCA5 RecName: Full=30S ribosomal protein S18
gi|193002245|gb|ACF07460.1| ribosomal protein S18 [Mycoplasma arthritidis 158L3-1]
Length = 130
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 9 LLRRNVSHRRKSCPLS--GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++R+ RR+ C + IDYK+ L R ++ +GKI+ SRI+ + QR +A
Sbjct: 4 VIRKKPFVRRRPCQFCLKRQAVTYIDYKNEAELVRLVNMQGKILSSRITGTCARHQRAVA 63
Query: 67 KAIKRARYLGLIAYVNL 83
AIKRARY+ ++ Y+ L
Sbjct: 64 LAIKRARYMAILPYIGL 80
>gi|325971036|ref|YP_004247227.1| 30S ribosomal protein S18 [Spirochaeta sp. Buddy]
gi|324026274|gb|ADY13033.1| 30S ribosomal protein S18 [Spirochaeta sp. Buddy]
Length = 96
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + R+K C + DYK+ +L R++++RGKI+P+RI+ K QR + IK+
Sbjct: 26 RKPAFRKKVCKFCTQNLTP-DYKNPEMLRRYITERGKILPARITGCCAKHQRAVTNEIKK 84
Query: 72 ARYLGLIAY 80
AR L + +
Sbjct: 85 ARVLAYLPF 93
>gi|16331711|ref|NP_442439.1| 30S ribosomal protein S18 [Synechocystis sp. PCC 6803]
gi|1350950|sp|P48946|RS18_SYNY3 RecName: Full=30S ribosomal protein S18
gi|1001265|dbj|BAA10509.1| 30S ribosomal protein S18 [Synechocystis sp. PCC 6803]
Length = 71
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ PL IDYKD LL +F+++RGKI+P RI+ ++ K+QR+L A+KR+R
Sbjct: 3 YYRKRLSPL--PPNQPIDYKDTELLRKFITERGKILPRRITGLTAKQQRDLTTAVKRSRL 60
Query: 75 LGLIAYVN 82
+ L+ +VN
Sbjct: 61 VALLPFVN 68
>gi|313891893|ref|ZP_07825495.1| ribosomal protein S18 [Dialister microaerophilus UPII 345-E]
gi|313119668|gb|EFR42858.1| ribosomal protein S18 [Dialister microaerophilus UPII 345-E]
Length = 77
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSH--RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++RR+ S R+K + G +DYKD+ L F+S+RGKI+P R++ K QR +
Sbjct: 1 MIRRDKSRKPRKKISQIFGDKLDNLDYKDVATLRHFISERGKILPRRVTGACAKHQRNIN 60
Query: 67 KAIKRARYLGLIAY 80
A+KRAR + L+ +
Sbjct: 61 LAVKRARAIALLPF 74
>gi|21221852|ref|NP_627631.1| 30S ribosomal protein S18 [Streptomyces coelicolor A3(2)]
gi|256786968|ref|ZP_05525399.1| 30S ribosomal protein S18 [Streptomyces lividans TK24]
gi|7388047|sp|Q9X8K4|RS182_STRCO RecName: Full=30S ribosomal protein S18 2
gi|4808364|emb|CAB42778.1| putative 30S ribosomal protein S18 [Streptomyces coelicolor
A3(2)]
Length = 79
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P P R++ PL G +DYKD LL +F+S RGKI R++ V+ ++QR+L
Sbjct: 2 PRPRKADRTPARQRPNPLDRDGVTYVDYKDTELLRKFVSDRGKIRSRRVTRVTSQQQRQL 61
Query: 66 AKAIKRARYLGLIAY 80
A+AIK AR + L+ Y
Sbjct: 62 ARAIKNAREMALLPY 76
>gi|302205794|gb|ADL10136.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
C231]
gi|308276029|gb|ADO25928.1| 30S ribosomal protein S18 [Corynebacterium pseudotuberculosis
I19]
Length = 77
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K
Sbjct: 5 RMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVK 64
Query: 71 RARYLGLIAYVN 82
AR + L+ + +
Sbjct: 65 NAREMALLPFTS 76
>gi|119488089|ref|ZP_01621533.1| 30S ribosomal protein S18 [Lyngbya sp. PCC 8106]
gi|119455378|gb|EAW36517.1| 30S ribosomal protein S18 [Lyngbya sp. PCC 8106]
Length = 71
Score = 99.2 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ P+ IDYK+I LL +F+++RGKI+P RI+ ++ K+QR+L KAIK+AR
Sbjct: 3 YFRRQVSPI--DPKTPIDYKNIELLRKFVTERGKILPRRITGLTCKQQRDLTKAIKQARI 60
Query: 75 LGLIAYVN 82
L ++ +VN
Sbjct: 61 LAMLPFVN 68
>gi|227832647|ref|YP_002834354.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
gi|262182868|ref|ZP_06042289.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
gi|227453663|gb|ACP32416.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC
700975]
Length = 84
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R + R K PL +G ++DYK+I+ L F+S RGKI R++ ++ ++QR++A A+
Sbjct: 11 FRMEQTRRPKKNPLKAEGIEKVDYKEIKTLRLFISDRGKIRSRRVTGLTPQQQRQVATAV 70
Query: 70 KRARYLGLIAYVN 82
K AR + L+ + +
Sbjct: 71 KNAREMALLPFTS 83
>gi|307326229|ref|ZP_07605426.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
gi|306888172|gb|EFN19161.1| ribosomal protein S18 [Streptomyces violaceusniger Tu 4113]
Length = 80
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R RR+ PL G +DYKD LL +F+S RGKI R+S V+ ++QR++A+AIK
Sbjct: 8 KRPDPKRRRVNPLDAAGITYVDYKDTDLLRKFISDRGKIRSRRVSHVTRRQQRQIARAIK 67
Query: 71 RARYLGLIAY 80
AR + L+ Y
Sbjct: 68 NAREMALLPY 77
>gi|148244753|ref|YP_001219447.1| 30S ribosomal protein S18 [Candidatus Vesicomyosocius okutanii
HA]
gi|205618817|sp|A5CWE0|RS18_VESOH RecName: Full=30S ribosomal protein S18
gi|146326580|dbj|BAF61723.1| 30S ribosomal protein S18 [Candidatus Vesicomyosocius okutanii
HA]
Length = 84
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR C + G +IDYKDI +L + + + GKI PSR++ S K QR+L AIK
Sbjct: 9 RRPQIKINTFCRFTAAGVTKIDYKDIDILLKNIDESGKITPSRMTGTSAKFQRKLTTAIK 68
Query: 71 RARYLGLIAYVN 82
RAR+L LI Y +
Sbjct: 69 RARFLALIPYTD 80
>gi|148242324|ref|YP_001227481.1| 30S ribosomal protein S18 [Synechococcus sp. RCC307]
gi|166222252|sp|A5GTB9|RS18_SYNR3 RecName: Full=30S ribosomal protein S18
gi|147850634|emb|CAK28128.1| 30S ribosomal protein S18 [Synechococcus sp. RCC307]
Length = 73
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+++ P+ IDYKD LL +F+++RGK++P R++ ++ ++QR+L ++KRA
Sbjct: 3 PSFFKKRLSPIK--PGDPIDYKDTDLLKKFITERGKLLPRRMTGLTARQQRDLTNSVKRA 60
Query: 73 RYLGLIAYVN 82
R + L+ +VN
Sbjct: 61 RIVALLPFVN 70
>gi|328886756|emb|CCA59995.1| SSU ribosomal protein S18p [Streptomyces venezuelae ATCC 10712]
Length = 78
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P R+ R PL G IDYKD +L +F+S RGKI R++ V+ ++QR
Sbjct: 1 MARRPEPRKPTKPR--PNPLDAAGITYIDYKDTDVLRKFISDRGKIRSRRVTRVTARQQR 58
Query: 64 ELAKAIKRARYLGLIAYVN 82
LA AIK AR + L+ Y +
Sbjct: 59 RLAAAIKNAREMALLPYTS 77
>gi|15828448|ref|NP_302711.1| 30S ribosomal protein S18 [Mycobacterium leprae TN]
gi|221230925|ref|YP_002504341.1| 30S ribosomal protein S18 [Mycobacterium leprae Br4923]
gi|6226084|sp|O53125|RS18_MYCLE RecName: Full=30S ribosomal protein S18
gi|254812949|sp|B8ZTL5|RS18_MYCLB RecName: Full=30S ribosomal protein S18
gi|2959410|emb|CAA17952.1| 30s ribosomal protein s18 [Mycobacterium leprae]
gi|13093878|emb|CAC32215.1| 30S ribosomal protein S18 [Mycobacterium leprae]
gi|219934032|emb|CAR72783.1| 30S ribosomal protein S18 [Mycobacterium leprae Br4923]
Length = 84
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + R+ C K +IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPAKARK--CVFCAKKNQQIDYKDTTLLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 IAVKNAREVALLPFTS 81
>gi|326774854|ref|ZP_08234119.1| ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
gi|326655187|gb|EGE40033.1| ribosomal protein S18 [Streptomyces cf. griseus XylebKG-1]
Length = 82
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 10 LRRNVSHRR----KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+ R R+ + PL IDYKD LL RF+S RGKI R++ +S ++QR++
Sbjct: 1 MARQQEPRKPFKSRPNPLDAAENTYIDYKDTDLLRRFVSDRGKIRGRRVTRISARQQRQV 60
Query: 66 AKAIKRARYLGLIAYVN 82
A AIK AR + L+ Y
Sbjct: 61 AAAIKNAREMALLPYTG 77
>gi|209528144|ref|ZP_03276618.1| ribosomal protein S18 [Arthrospira maxima CS-328]
gi|284050077|ref|ZP_06380287.1| 30S ribosomal protein S18 [Arthrospira platensis str. Paraca]
gi|209491432|gb|EDZ91813.1| ribosomal protein S18 [Arthrospira maxima CS-328]
gi|291568150|dbj|BAI90422.1| 30S ribosomal protein S18 [Arthrospira platensis NIES-39]
Length = 71
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ P+ IDYK+I LL +F+++RGKI+P RI+ ++ K+QR+L KAIKRAR
Sbjct: 3 YFRRQVSPI--DPKTPIDYKNIELLKKFMTERGKILPRRITGLTCKQQRDLTKAIKRARI 60
Query: 75 LGLIAYVN 82
L ++ +VN
Sbjct: 61 LAMLPFVN 68
>gi|157736504|ref|YP_001489187.1| 30S ribosomal protein S18 [Arcobacter butzleri RM4018]
gi|315635663|ref|ZP_07890926.1| 30S ribosomal protein S18 [Arcobacter butzleri JV22]
gi|167011186|sp|A8ERE4|RS18_ARCB4 RecName: Full=30S ribosomal protein S18
gi|157698358|gb|ABV66518.1| 30S ribosomal protein S18 [Arcobacter butzleri RM4018]
gi|315479960|gb|EFU70630.1| 30S ribosomal protein S18 [Arcobacter butzleri JV22]
Length = 88
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + +K C + IDYK+ LL +S+RGKI+P R++ S Q + KAI
Sbjct: 1 MAERRKYGKKYCKYTEMKVDFIDYKNTELLKLSMSERGKIMPRRLTGNSKNAQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ L+ Y+
Sbjct: 61 KRARHMALVPYI 72
>gi|67924091|ref|ZP_00517538.1| Ribosomal protein S18 [Crocosphaera watsonii WH 8501]
gi|67854052|gb|EAM49364.1| Ribosomal protein S18 [Crocosphaera watsonii WH 8501]
Length = 71
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ K I+YKD LL +F+++RGKI+P RI+ ++ K+QR L A+KRAR+
Sbjct: 3 YYRKRLSPIPPK--QPINYKDTELLRKFITERGKILPRRITGLTAKQQRALTTAVKRARF 60
Query: 75 LGLIAYVN 82
L L+ +VN
Sbjct: 61 LALLPFVN 68
>gi|297154862|gb|ADI04574.1| 30S ribosomal protein S18 [Streptomyces bingchenggensis BCW-1]
Length = 80
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R S R + PL G +DYK+ LL +F+S RGKI R++ V+ ++QR++++AIK
Sbjct: 9 RRTSKRPRVNPLDAAGITYVDYKNTDLLRKFISDRGKIRSRRVTHVTRQQQRQISRAIKN 68
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 69 AREMALLPY 77
>gi|256370867|ref|YP_003108691.1| ribosomal protein S18 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007451|gb|ACU53018.1| ribosomal protein S18 [Acidimicrobium ferrooxidans DSM 10331]
Length = 135
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K C + +DYKD+ LL RF S+R KI R++ + Q ++A AIK AR L
Sbjct: 22 KKKPCVFCQQHVDWVDYKDVDLLRRFTSERAKIRARRVTGNCAQHQADVANAIKVARELA 81
Query: 77 LIAYV 81
L+ YV
Sbjct: 82 LLPYV 86
>gi|227548279|ref|ZP_03978328.1| 30S ribosomal protein S18 [Corynebacterium lipophiloflavum DSM
44291]
gi|227079597|gb|EEI17560.1| 30S ribosomal protein S18 [Corynebacterium lipophiloflavum DSM
44291]
Length = 83
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M R S R K PL +G ++DYKD++ L F+S R KI R++ ++ +
Sbjct: 1 MKRGNNQRKQRMEQSRRPKKNPLKAEGIEKVDYKDVKTLRLFISDRHKIRSRRVTGLTPQ 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR++A A+K AR + L+ + +
Sbjct: 61 QQRQVATAVKNAREMALLPFTS 82
>gi|157164150|ref|YP_001467166.1| 30S ribosomal protein S18 [Campylobacter concisus 13826]
gi|166220936|sp|A7ZEF8|RS18_CAMC1 RecName: Full=30S ribosomal protein S18
gi|112801371|gb|EAT98715.1| ribosomal protein S18 [Campylobacter concisus 13826]
Length = 86
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S + Q + KAI
Sbjct: 1 MAEKRKYSRKYCKFTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKRYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+ +I Y+
Sbjct: 61 KRARHAAIIPYI 72
>gi|31544817|ref|NP_853395.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(low)]
gi|59798824|sp|Q7NAM3|RS18_MYCGA RecName: Full=30S ribosomal protein S18
gi|31541663|gb|AAP56963.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(low)]
gi|284930891|gb|ADC30830.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. R(high)]
gi|284931647|gb|ADC31585.1| 30S ribosomal protein S18 [Mycoplasma gallisepticum str. F]
Length = 108
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 11 RRNVSHR---RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
+R ++ RK C KG ++DYKD+ L + L+ KIV R S + QR ++
Sbjct: 33 KRKTFYKSRSRKLCHFCAKGILKVDYKDVNTLRKNLNSYAKIVSRRQSGNCNLHQRHVSN 92
Query: 68 AIKRARYLGLIAYV 81
AIK+AR + L+ +V
Sbjct: 93 AIKKARIMALLPFV 106
>gi|157363691|ref|YP_001470458.1| 30S ribosomal protein S18 [Thermotoga lettingae TMO]
gi|205618988|sp|A8F5G0|RS18_THELT RecName: Full=30S ribosomal protein S18
gi|157314295|gb|ABV33394.1| ribosomal protein S18 [Thermotoga lettingae TMO]
Length = 78
Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L +DYKD+RLLN FL+ + KI+P R++ K QR + AIKRAR++ L+ ++
Sbjct: 18 LCEMKVEYVDYKDLRLLNEFLTDKAKIIPKRVTGNCAKHQRMIKIAIKRARHMALLPFIK 77
Query: 83 L 83
L
Sbjct: 78 L 78
>gi|313159250|gb|EFR58619.1| ribosomal protein S18 [Alistipes sp. HGB5]
Length = 92
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
G +DYKD L +FL+++GKI+P R++ S K Q+++A+A+KRAR+L ++ +V
Sbjct: 33 GIRYVDYKDGEFLKKFLNEQGKILPRRLTGTSQKFQKKVAQAVKRARHLAILPFVT 88
>gi|251772232|gb|EES52802.1| ribosomal protein S18 [Leptospirillum ferrodiazotrophum]
Length = 76
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K C + IDYKD L+ +L++RGKI+P R++ QR +++AIK++R
Sbjct: 8 FQRKKVCRFCTE-FLAIDYKDQTTLHSYLTERGKILPRRLTGTCSHHQRAVSRAIKQSRN 66
Query: 75 LGLIAY 80
+ +A+
Sbjct: 67 VAFLAF 72
>gi|281356649|ref|ZP_06243140.1| ribosomal protein S18 [Victivallis vadensis ATCC BAA-548]
gi|281316776|gb|EFB00799.1| ribosomal protein S18 [Victivallis vadensis ATCC BAA-548]
Length = 77
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR + K C ID+KD L +F +++GKI+P RI+ Q+ LA AIK
Sbjct: 9 RRRSPAKPKICRFCEAKVSYIDFKDAETLMKFQTEKGKIMPRRITGTCLDHQKMLATAIK 68
Query: 71 RARYLGLI 78
RAR + L+
Sbjct: 69 RARIIALV 76
>gi|294155691|ref|YP_003560075.1| 30S ribosomal protein S18 [Mycoplasma crocodyli MP145]
gi|291600476|gb|ADE19972.1| 30S ribosomal protein S18 [Mycoplasma crocodyli MP145]
Length = 85
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
++C IDYKD+ L ++++ G+I P S K QR++A AIKRARY+ +
Sbjct: 15 RACEFCENHVQYIDYKDVETLKKYINATGQIKPKANSGACAKHQRKIASAIKRARYIAFL 74
Query: 79 AYV 81
Y
Sbjct: 75 PYT 77
>gi|19552092|ref|NP_600094.1| 30S ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|25027496|ref|NP_737550.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
gi|62389755|ref|YP_225157.1| 30S ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|145295036|ref|YP_001137857.1| 30S ribosomal protein S18 [Corynebacterium glutamicum R]
gi|259507096|ref|ZP_05749996.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
gi|54039410|sp|P66456|RS18_COREF RecName: Full=30S ribosomal protein S18
gi|54042145|sp|P66455|RS18_CORGL RecName: Full=30S ribosomal protein S18
gi|166220949|sp|A4QCK8|RS18_CORGB RecName: Full=30S ribosomal protein S18
gi|21323632|dbj|BAB98259.1| Ribosomal protein S18 [Corynebacterium glutamicum ATCC 13032]
gi|23492778|dbj|BAC17750.1| putative 30S ribosomal protein S18 [Corynebacterium efficiens
YS-314]
gi|41325090|emb|CAF19571.1| 30S RIBOSOMAL PROTEIN S18 [Corynebacterium glutamicum ATCC 13032]
gi|140844956|dbj|BAF53955.1| hypothetical protein [Corynebacterium glutamicum R]
gi|259165374|gb|EEW49928.1| 30S ribosomal protein S18 [Corynebacterium efficiens YS-314]
Length = 83
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
M + +R + R K PL G ++DYKDI L +F+S R KI R++ ++ +
Sbjct: 1 MKQRNNAKRVRLEQTRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQ 60
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QRE+A A+K AR + L+ + +
Sbjct: 61 QQREVATAVKNAREMALLPFTS 82
>gi|308189828|ref|YP_003922759.1| 30S ribosomal protein S18 [Mycoplasma fermentans JER]
gi|319777043|ref|YP_004136694.1| 30S ribosomal protein s18 [Mycoplasma fermentans M64]
gi|307624570|gb|ADN68875.1| 30S ribosomal protein S18 [Mycoplasma fermentans JER]
gi|318038118|gb|ADV34317.1| 30S ribosomal protein S18 [Mycoplasma fermentans M64]
Length = 84
Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ + RR+ C + +DYKD+ L++F++ G+I P + K QR++A AIK
Sbjct: 6 KKKNNFRRRRCETCDQKLTYVDYKDVEFLSKFITATGQIKPHSATGACAKDQRKIANAIK 65
Query: 71 RARYLGLIAY 80
RAR++ LI Y
Sbjct: 66 RARFMALIPY 75
>gi|298345837|ref|YP_003718524.1| putative 30S ribosomal protein S18 [Mobiluncus curtisii ATCC
43063]
gi|304390460|ref|ZP_07372413.1| 30S ribosomal protein S18 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315654410|ref|ZP_07907318.1| ribosomal protein S18 [Mobiluncus curtisii ATCC 51333]
gi|315657668|ref|ZP_07910550.1| ribosomal protein S18 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235898|gb|ADI67030.1| possible 30S ribosomal protein S18 [Mobiluncus curtisii ATCC
43063]
gi|304326216|gb|EFL93461.1| 30S ribosomal protein S18 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315491445|gb|EFU81062.1| ribosomal protein S18 [Mobiluncus curtisii ATCC 51333]
gi|315492140|gb|EFU81749.1| ribosomal protein S18 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 81
Score = 98.0 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ ++K+ PL + IDYKD LL +F+S RGKI R++ VS ++QR++AKA
Sbjct: 5 MRNNTKPIKKKTNPLKAQKVGNIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKA 64
Query: 69 IKRARYLGLIAY 80
+K AR + L+ Y
Sbjct: 65 VKNAREMALLPY 76
>gi|319957607|ref|YP_004168870.1| SSU ribosomal protein s18p [Nitratifractor salsuginis DSM 16511]
gi|319420011|gb|ADV47121.1| SSU ribosomal protein S18P [Nitratifractor salsuginis DSM 16511]
Length = 87
Score = 98.0 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ +++ C + IDYKD++LL LS+R KI+P R++ K Q + AI
Sbjct: 1 MAERRRFKKRYCRYCEQKVDFIDYKDLQLLKFSLSERYKIMPRRLTGNCKKHQEMVTAAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI Y+
Sbjct: 61 KRARQTALIPYI 72
>gi|218440037|ref|YP_002378366.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7424]
gi|218172765|gb|ACK71498.1| ribosomal protein S18 [Cyanothece sp. PCC 7424]
Length = 71
Score = 98.0 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ + I+YKDI LL +F+++RGKI+P RI+ ++ K+QR+L A+K+AR
Sbjct: 3 YYRKRLSPI--PPSQPINYKDIELLRKFITERGKILPRRITGLTAKQQRDLTTAVKQARI 60
Query: 75 LGLIAYVN 82
L L+ ++N
Sbjct: 61 LALLPFIN 68
>gi|38233445|ref|NP_939212.1| 30S ribosomal protein S18 [Corynebacterium diphtheriae NCTC
13129]
gi|59798749|sp|Q6NIC9|RS18_CORDI RecName: Full=30S ribosomal protein S18
gi|38199705|emb|CAE49364.1| 30S ribosomal protein S18-2 [Corynebacterium diphtheriae]
Length = 82
Score = 98.0 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL G ++DYKDI L +F+S R KI R++ ++ ++QR++A A+K
Sbjct: 10 RMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDRHKIRSRRVTGLTPQQQRQVATAVK 69
Query: 71 RARYLGLIAYVN 82
AR + L+ + +
Sbjct: 70 NAREMALLPFTS 81
>gi|302543826|ref|ZP_07296168.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|302461444|gb|EFL24537.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
Length = 80
Score = 98.0 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R RR++ PL G +DYKD LL +F+S RGKI R++ V+ ++QR++A+AIK
Sbjct: 9 RPDPRRRRANPLDAAGITYVDYKDTDLLRKFISDRGKIRSRRVTHVTRRQQRQIARAIKN 68
Query: 72 ARYLGLIAY 80
AR + LI Y
Sbjct: 69 AREMALIPY 77
>gi|227501463|ref|ZP_03931512.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49725]
gi|255324827|ref|ZP_05365940.1| ribosomal protein S18 [Corynebacterium tuberculostearicum SK141]
gi|306835624|ref|ZP_07468633.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49726]
gi|311740881|ref|ZP_07714708.1| 30S ribosomal protein S18 [Corynebacterium pseudogenitalium ATCC
33035]
gi|227077488|gb|EEI15451.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49725]
gi|255298127|gb|EET77431.1| ribosomal protein S18 [Corynebacterium tuberculostearicum SK141]
gi|304568468|gb|EFM44024.1| 30S ribosomal protein S18 [Corynebacterium accolens ATCC 49726]
gi|311304401|gb|EFQ80477.1| 30S ribosomal protein S18 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 84
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
R S R K PL +G ++DYKD + L F+S R KI R++ ++ ++QR+
Sbjct: 6 NNQKKFRMEQSRRPKKNPLKAEGIEKVDYKDTKTLRLFISDRHKIRSRRVTGLTPQQQRQ 65
Query: 65 LAKAIKRARYLGLIAYVN 82
+A A+K AR + L+ +
Sbjct: 66 VATAVKNAREMALLPFTT 83
>gi|11467563|ref|NP_043709.1| ribosomal protein S18 [Odontella sinensis]
gi|1350880|sp|P49505|RR18_ODOSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1185258|emb|CAA91741.1| 30S ribosomal protein S18 [Odontella sinensis]
Length = 72
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K P+S +IDYKDI LL F++++GKI+P R + V+ ++QR++AKAIKRAR
Sbjct: 2 LAQKQKLSPISVN--QKIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQIAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L+ +V
Sbjct: 60 VLSLLPFV 67
>gi|291277457|ref|YP_003517229.1| 30S ribosomal protein S18 [Helicobacter mustelae 12198]
gi|290964651|emb|CBG40506.1| 30S ribosomal protein S18 [Helicobacter mustelae 12198]
Length = 84
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ S ++ C + IDYKD+ +L LS+R KI+P R++ + K Q + A
Sbjct: 1 MERKKYS--KRYCKYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNTKKWQERVEVA 58
Query: 69 IKRARYLGLIAYV 81
IKRAR++ LI Y+
Sbjct: 59 IKRARHMALIPYI 71
>gi|154174830|ref|YP_001407994.1| 30S ribosomal protein S18 [Campylobacter curvus 525.92]
gi|166220937|sp|A7GXQ2|RS18_CAMC5 RecName: Full=30S ribosomal protein S18
gi|112803289|gb|EAU00633.1| ribosomal protein S18 [Campylobacter curvus 525.92]
Length = 86
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + RK C + IDYKD LL LS+R KI+P R++ S K Q + KAI
Sbjct: 1 MAEKRKYSRKYCKYTEAKIDFIDYKDTSLLKYCLSERFKIMPRRLTGTSKKYQEMVEKAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+ +I Y+
Sbjct: 61 KRARHAAIIPYI 72
>gi|160902036|ref|YP_001567617.1| ribosomal protein S18 [Petrotoga mobilis SJ95]
gi|254812950|sp|A9BH64|RS18_PETMO RecName: Full=30S ribosomal protein S18
gi|160359680|gb|ABX31294.1| ribosomal protein S18 [Petrotoga mobilis SJ95]
Length = 76
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ R K C L IDYKD+R L F++ +GKI+P RI+ K QR + AI+R
Sbjct: 5 KKERKRIKKCKLCRDNVEYIDYKDVRKLKEFMNDKGKILPKRINGNCAKHQRMVRTAIQR 64
Query: 72 ARYLGLIAYVN 82
AR + L+ YVN
Sbjct: 65 ARKMMLVPYVN 75
>gi|302553143|ref|ZP_07305485.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
gi|302470761|gb|EFL33854.1| ribosomal protein S18 [Streptomyces viridochromogenes DSM 40736]
Length = 77
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + + PL G +DYKD LL +F+S RGKI R++ VS ++QR+LA+
Sbjct: 2 PRKPDRTPAKNRPNPLDQAGITYVDYKDTDLLRKFVSDRGKIRSRRVTRVSSQQQRQLAR 61
Query: 68 AIKRARYLGLIAYVN 82
AIK AR + L+ Y +
Sbjct: 62 AIKNAREMALLPYTS 76
>gi|291320202|ref|YP_003515463.1| 30S ribosomal protein S18 [Mycoplasma agalactiae]
gi|290752534|emb|CBH40506.1| 30S ribosomal protein S18 [Mycoplasma agalactiae]
Length = 107
Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A +++ + RRK C L +DYK++ + +F+S G+I P + + QR
Sbjct: 1 MANFKKVKKGRNLRRK-CELCETNIEYVDYKNVEFITKFISGIGQIKPHVSTGTCARHQR 59
Query: 64 ELAKAIKRARYLGLIAYV 81
++A AIKRAR++ LI Y
Sbjct: 60 KVANAIKRARFMALIPYT 77
>gi|54027548|ref|YP_121790.1| 30S ribosomal protein S18 [Nocardia farcinica IFM 10152]
gi|59798928|sp|Q5YN15|RS181_NOCFA RecName: Full=30S ribosomal protein S18 1
gi|54019056|dbj|BAD60426.1| putative ribosomal protein S18 [Nocardia farcinica IFM 10152]
Length = 83
Score = 97.6 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 12 RNVSHRRKSCPLSGK---GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
R ++K+C + G IDYKD LL +++S RGKI R++ + QR++A A
Sbjct: 7 REKVLKKKACTFCKESKSGNVSIDYKDTTLLRKYVSDRGKIRARRVTGNCVQHQRDIAVA 66
Query: 69 IKRARYLGLIAYVN 82
+K +R + L+ YV+
Sbjct: 67 VKNSREVALLPYVS 80
>gi|293977885|ref|YP_003543315.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri DMIN]
gi|292667816|gb|ADE35451.1| ribosomal protein S18 [Candidatus Sulcia muelleri DMIN]
Length = 156
Score = 97.6 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
K C ID+K+ L +FL++RG+I+P RI+ S K Q +L +AIK+
Sbjct: 83 ETKPENKYCFFKKNNIKYIDFKNPSFLMKFLNERGEILPRRITGTSKKFQNKLKRAIKKC 142
Query: 73 RYLGLIAYVN 82
+++GL+ Y+
Sbjct: 143 KHIGLLPYLT 152
>gi|307152099|ref|YP_003887483.1| 30S ribosomal protein S18 [Cyanothece sp. PCC 7822]
gi|306982327|gb|ADN14208.1| ribosomal protein S18 [Cyanothece sp. PCC 7822]
Length = 71
Score = 97.6 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+R++ P+ + IDYKDI LL +F+++RGKI+P RI+ ++ ++QR+L A+KRAR
Sbjct: 3 YYRKRLSPI--PPSQPIDYKDIELLRKFITERGKILPRRITGLTAQQQRDLTAAVKRARL 60
Query: 75 LGLIAYVN 82
+ L+ ++N
Sbjct: 61 IALLPFIN 68
>gi|71894545|ref|YP_278653.1| 30S ribosomal protein S18 [Mycoplasma synoviae 53]
gi|123775422|sp|Q4A5M9|RS18_MYCS5 RecName: Full=30S ribosomal protein S18
gi|71851333|gb|AAZ43942.1| 30S ribosomal protein S18 [Mycoplasma synoviae 53]
Length = 111
Score = 97.6 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
++ +++++C +DYK++ L +F++ G I P + K QR++ A+K
Sbjct: 7 KKGYHNKKRTCHFCDNKLTYVDYKNVEDLKKFVNAVGSIKPKVATGNCAKHQRKVTLAVK 66
Query: 71 RARYLGLIAY 80
RAR + L+ +
Sbjct: 67 RARLMALLPF 76
>gi|242310277|ref|ZP_04809432.1| 30S ribosomal protein S18 [Helicobacter pullorum MIT 98-5489]
gi|239523574|gb|EEQ63440.1| 30S ribosomal protein S18 [Helicobacter pullorum MIT 98-5489]
Length = 85
Score = 97.6 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + ++ C + IDYKDI +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKKRYSKRYCRYTESKIEFIDYKDIDMLKHSLSERYKIMPRRLTGNSKKWQERVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR + LI Y+
Sbjct: 61 KRARQMALIPYI 72
>gi|302562722|ref|ZP_07315064.1| 30S ribosomal protein S18 [Streptomyces griseoflavus Tu4000]
gi|302480340|gb|EFL43433.1| 30S ribosomal protein S18 [Streptomyces griseoflavus Tu4000]
Length = 78
Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+AP R+ + R PL G IDYK+ LL +F+S R KI ++ V+ ++QR
Sbjct: 1 MAPRQGPRKPLKSR--PNPLDAAGITYIDYKNTDLLRKFISDRSKIRSRHVTRVTAQQQR 58
Query: 64 ELAKAIKRARYLGLIAYVN 82
ELA AIK AR + L+ Y +
Sbjct: 59 ELATAIKNAREMALLPYSS 77
>gi|320012231|gb|ADW07081.1| ribosomal protein S18 [Streptomyces flavogriseus ATCC 33331]
Length = 77
Score = 97.3 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 9 LLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
+ RR S + + PL G +DYKD LL +F+S RGKI R++ ++ ++QR++A
Sbjct: 1 MPRRQESPPKARPNPLDTAGITYVDYKDTDLLRKFVSDRGKIRSRRVTRITARQQRQVAT 60
Query: 68 AIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 61 AVKNAREMALLPY 73
>gi|118411132|ref|YP_874526.1| 30S ribosomal protein S18 [Thalassiosira pseudonana]
gi|224015780|ref|XP_002297538.1| RR18, ribosomal protein 18 30S small ribosomal subunit,
chloroplast, translation, protein biosynthesis
[Thalassiosira pseudonana CCMP1335]
gi|125987698|sp|A0T0R4|RR18_THAPS RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116739879|gb|ABK20749.1| 30S ribosomal protein S18 [Thalassiosira pseudonana]
gi|220967802|gb|EED86178.1| RR18, ribosomal protein 18 30S small ribosomal subunit,
chloroplast, translation, protein biosynthesis
[Thalassiosira pseudonana CCMP1335]
Length = 72
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+IDYKDI LL F++++GKI+P R + V+ ++QR+LAKAIKRAR L L+ +V
Sbjct: 15 QKIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQLAKAIKRARILSLLPFV 67
>gi|152990910|ref|YP_001356632.1| 30S ribosomal protein S18 [Nitratiruptor sp. SB155-2]
gi|166220964|sp|A6Q466|RS18_NITSB RecName: Full=30S ribosomal protein S18
gi|151422771|dbj|BAF70275.1| 30S ribosomal protein S18 [Nitratiruptor sp. SB155-2]
Length = 91
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ ++++C + IDYKDI L+ LS+R KI+P R++ K Q + +AI
Sbjct: 1 MAEKRRFKKRTCKYCEQKVTFIDYKDIELIKHSLSERYKIMPRRLTGNCKKHQVMVEEAI 60
Query: 70 KRARYLGLIAYV 81
KRAR+ L+ Y+
Sbjct: 61 KRARHAALVPYI 72
>gi|11467693|ref|NP_050745.1| ribosomal protein S18 [Guillardia theta]
gi|6094134|sp|O78488|RR18_GUITH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|3603018|gb|AAC35679.1| ribosomal protein S18 [Guillardia theta]
Length = 73
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
RRK+ P+ IDYKD+ LL++FL+++GKI+P RI+ ++ K+Q L KA+KRAR L
Sbjct: 4 FRRKNSPIKKD--DFIDYKDVELLSKFLTEQGKILPRRITGLTMKQQSRLTKAVKRARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFIN 68
>gi|108773338|ref|YP_635893.1| ribosomal protein S18 [Oltmannsiellopsis viridis]
gi|122238313|sp|Q20EV2|RR18_OLTVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|82541920|gb|ABB81961.1| ribosomal protein S18 [Oltmannsiellopsis viridis]
Length = 78
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+DYK+I LL +++S GKI+P RI+ ++ K+QR +AKAIK AR +GL+ ++NL
Sbjct: 22 TVDYKNIALLRKYISTEGKILPRRITGLTAKQQRAVAKAIKNARMVGLLPFINL 75
>gi|183221480|ref|YP_001839476.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911567|ref|YP_001963122.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|205558218|sp|B0SB38|RS18_LEPBA RecName: Full=30S ribosomal protein S18
gi|205558230|sp|B0SSW0|RS18_LEPBP RecName: Full=30S ribosomal protein S18
gi|167776243|gb|ABZ94544.1| 30S Ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779902|gb|ABZ98200.1| 30S ribosomal protein S18 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 94
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPR--IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
R+N +++K C A +DYK + +L RF++ RGKI+P RI+ K QR LA
Sbjct: 18 FGRKNAKYKKKVCKFCADKALLAGLDYKRVDILERFVTNRGKIIPRRITGTCGKHQRALA 77
Query: 67 KAIKRARYLGLIAY 80
+ I+++R +GL+ +
Sbjct: 78 REIRKSRSIGLLPF 91
>gi|145221901|ref|YP_001132579.1| ribosomal protein S18 [Mycobacterium gilvum PYR-GCK]
gi|145214387|gb|ABP43791.1| SSU ribosomal protein S18P [Mycobacterium gilvum PYR-GCK]
Length = 63
Score = 97.3 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+ G R+DYKD L +FLS+RGKI ++ ++ ++QR++ A+K AR + L+ Y
Sbjct: 2 FAQLGIERVDYKDTSTLRQFLSERGKIRSRTVTGLTVQQQRQVTIAVKNAREMALLPY 59
>gi|237753481|ref|ZP_04583961.1| 30S ribosomal protein S18 [Helicobacter winghamensis ATCC
BAA-430]
gi|229375748|gb|EEO25839.1| 30S ribosomal protein S18 [Helicobacter winghamensis ATCC
BAA-430]
Length = 85
Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + ++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKKRYSKRYCRYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNSKKWQERVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR + LI Y+
Sbjct: 61 KRARQMALIPYI 72
>gi|297192957|ref|ZP_06910355.1| 30S ribosomal protein S18 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|197722638|gb|EDY66546.1| 30S ribosomal protein S18 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 82
Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ + PL IDYKD LL +F+S RGKI R++ VS ++QR+LA+AIK AR +
Sbjct: 13 KSRPNPLDRARITYIDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQLARAIKNAREMA 72
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 73 LLPYTS 78
>gi|56416480|ref|YP_153554.1| 30S ribosomal protein S18 [Anaplasma marginale str. St. Maries]
gi|81677669|sp|Q5PBN0|RS18_ANAMM RecName: Full=30S ribosomal protein S18
gi|56387712|gb|AAV86299.1| small subunit ribosomal protein S18 [Anaplasma marginale str. St.
Maries]
Length = 75
Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 53/73 (72%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+R + +SCPL+ IDYK+ LL++F+S+ G+I+PSRI+SVS +KQ+ LA+A
Sbjct: 3 YLKRPYFRKSRSCPLAQCPDEDIDYKNRALLSKFVSEYGRILPSRITSVSSRKQKLLARA 62
Query: 69 IKRARYLGLIAYV 81
+KRAR+L L+ Y
Sbjct: 63 VKRARFLALLPYC 75
>gi|29831189|ref|NP_825823.1| 30S ribosomal protein S18 [Streptomyces avermitilis MA-4680]
gi|59798959|sp|Q82EG9|RS182_STRAW RecName: Full=30S ribosomal protein S18 2
gi|29608303|dbj|BAC72358.1| putative ribosomal protein S18 [Streptomyces avermitilis MA-4680]
Length = 78
Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R V+ + PL G IDYKD LL +FLS RGKI R++ V+ ++QR LA+A+K
Sbjct: 7 RKVASTPRPNPLDQNGITYIDYKDTDLLRKFLSDRGKIRSRRVTRVTAQQQRLLARAVKN 66
Query: 72 ARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 67 AREMALLPYSS 77
>gi|195952827|ref|YP_002121117.1| ribosomal protein S18 [Hydrogenobaculum sp. Y04AAS1]
gi|195932439|gb|ACG57139.1| ribosomal protein S18 [Hydrogenobaculum sp. Y04AAS1]
Length = 73
Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ K C + +YK+ L F+S+ GKI+P R++ V K QR+LA IKRAR L
Sbjct: 7 KKAKVCKFCMEKRDP-NYKNYNELREFMSEHGKILPRRMTFVCAKHQRKLANEIKRARQL 65
Query: 76 GLIAYV 81
L+ YV
Sbjct: 66 ALLPYV 71
>gi|315320484|ref|YP_004072540.1| 30S ribosomal protein S18 [Thalassiosira oceanica CCMP1005]
gi|283568957|gb|ADB27494.1| 30S ribosomal protein S18 [Thalassiosira oceanica CCMP1005]
Length = 72
Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+IDYKDI LL F++++GKI+P R + V+ ++QR++AKAIKRAR L L+ +V
Sbjct: 15 QKIDYKDIDLLKLFITEQGKILPRRATGVTVQQQRQIAKAIKRARVLSLLPFV 67
>gi|315453471|ref|YP_004073741.1| 30S ribosomal protein S18 [Helicobacter felis ATCC 49179]
gi|315132523|emb|CBY83151.1| 30S ribosomal protein S18 [Helicobacter felis ATCC 49179]
Length = 84
Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + AIKRA
Sbjct: 3 KKRYSKRYCKYTEAKIEFIDYKDLELLRYSLSERYKIMPRRLTGNSKKWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI YV
Sbjct: 63 RHMALIPYV 71
>gi|322379198|ref|ZP_08053589.1| 30S ribosomal protein S18 [Helicobacter suis HS1]
gi|322379730|ref|ZP_08054043.1| 30S ribosomal protein S18 [Helicobacter suis HS5]
gi|321147879|gb|EFX42466.1| 30S ribosomal protein S18 [Helicobacter suis HS5]
gi|321148338|gb|EFX42847.1| 30S ribosomal protein S18 [Helicobacter suis HS1]
Length = 85
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R+ S ++ C + IDYKD+ LL LS+R KI+P R++ S K Q + A
Sbjct: 1 MERKKYS--KRYCKYTEAKIEFIDYKDLELLKHSLSERYKIMPRRLTGNSKKWQERVEVA 58
Query: 69 IKRARYLGLIAYV 81
IKRAR++ LI Y+
Sbjct: 59 IKRARHMALIPYI 71
>gi|300781695|ref|ZP_07091549.1| 30S ribosomal protein S18 [Corynebacterium genitalium ATCC 33030]
gi|300533402|gb|EFK54463.1| 30S ribosomal protein S18 [Corynebacterium genitalium ATCC 33030]
Length = 82
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R S R K PL KG +DYKDI L F+S R KI R++ ++ ++QR++A A+K
Sbjct: 10 RMEQSRRPKKNPLKAKGIEAVDYKDIETLRLFISDRHKIRSRRVTGLTPQQQRQVATAVK 69
Query: 71 RARYLGLIAYVN 82
AR + L+ + +
Sbjct: 70 NAREMALLPFTS 81
>gi|84497235|ref|ZP_00996057.1| 30S ribosomal protein S18-2 [Janibacter sp. HTCC2649]
gi|84382123|gb|EAP98005.1| 30S ribosomal protein S18-2 [Janibacter sp. HTCC2649]
Length = 73
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K+ PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR
Sbjct: 2 RKPKKKANPLKAAKVENIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIANAVKNAR 61
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 62 EMALLPYSS 70
>gi|313836466|gb|EFS74180.1| ribosomal protein S18 [Propionibacterium acnes HL037PA2]
gi|314928921|gb|EFS92752.1| ribosomal protein S18 [Propionibacterium acnes HL044PA1]
gi|314971088|gb|EFT15186.1| ribosomal protein S18 [Propionibacterium acnes HL037PA3]
gi|328906632|gb|EGG26407.1| 30S ribosomal protein S18 [Propionibacterium sp. P08]
Length = 79
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGKI R++ +S + QR++A AIK
Sbjct: 5 QRKTVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|169631970|ref|YP_001705619.1| 30S ribosomal protein S18 [Mycobacterium abscessus ATCC 19977]
gi|169243937|emb|CAM64965.1| 30S ribosomal protein S18 [Mycobacterium abscessus]
Length = 84
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P + V R+ C K A IDYKD LL ++S+RGKI R++ + QR++A
Sbjct: 8 RPAPEKPVKTRK--CAFCTKKALNIDYKDTNLLRTYISERGKIRARRVTGNCVQHQRDIA 65
Query: 67 KAIKRARYLGLIAYVN 82
A+K AR + L+ + +
Sbjct: 66 IAVKNAREVALLPFSS 81
>gi|161546631|ref|NP_860069.2| 30S ribosomal protein S18 [Helicobacter hepaticus ATCC 51449]
gi|205562249|sp|Q7VIR6|RS18_HELHP RecName: Full=30S ribosomal protein S18
Length = 84
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ +L LS+R KI+P R++ + + Q + AIKRA
Sbjct: 3 KKKYSKRYCRYTEAKLEYIDYKDVEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI Y+
Sbjct: 63 RHMALIPYI 71
>gi|116672660|ref|YP_833593.1| 30S ribosomal protein S18 [Arthrobacter sp. FB24]
gi|119961039|ref|YP_949830.1| 30S ribosomal protein S18 [Arthrobacter aurescens TC1]
gi|220914622|ref|YP_002489931.1| 30S ribosomal protein S18 [Arthrobacter chlorophenolicus A6]
gi|325965247|ref|YP_004243153.1| 30S ribosomal protein S18P [Arthrobacter phenanthrenivorans
Sphe3]
gi|205556877|sp|A1RC68|RS18_ARTAT RecName: Full=30S ribosomal protein S18
gi|205556887|sp|A0K2H3|RS18_ARTS2 RecName: Full=30S ribosomal protein S18
gi|254765405|sp|B8H839|RS18_ARTCA RecName: Full=30S ribosomal protein S18
gi|116612769|gb|ABK05493.1| SSU ribosomal protein S18P [Arthrobacter sp. FB24]
gi|119947898|gb|ABM06809.1| ribosomal protein S18 [Arthrobacter aurescens TC1]
gi|219861500|gb|ACL41842.1| ribosomal protein S18 [Arthrobacter chlorophenolicus A6]
gi|323471334|gb|ADX75019.1| SSU ribosomal protein S18P [Arthrobacter phenanthrenivorans
Sphe3]
Length = 79
Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR
Sbjct: 7 RKPKPKSNPLKAADITVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|224117578|ref|XP_002331671.1| predicted protein [Populus trichocarpa]
gi|222874090|gb|EEF11221.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 96.5 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +RR R + C + + + D++++R L F++ G I+ R + +S K QR++A
Sbjct: 155 KPFVRRE--RRDEFCVTTAEVLSKADFRNVRFLANFITDAGIIIKRRQTGISAKAQRKVA 212
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + +
Sbjct: 213 REIKTARAFGLMPFTTM 229
>gi|302538024|ref|ZP_07290366.1| ribosomal protein S18 [Streptomyces sp. C]
gi|302446919|gb|EFL18735.1| ribosomal protein S18 [Streptomyces sp. C]
Length = 78
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A P + + R PL G IDYKD LL +F+S RGKI R++ V+ ++QR
Sbjct: 1 MARRPSPSKPLKSR--PNPLDTAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVTAQQQR 58
Query: 64 ELAKAIKRARYLGLIAY 80
LA AIK AR + L+ Y
Sbjct: 59 RLALAIKNAREMALLPY 75
>gi|257057878|ref|YP_003135710.1| 30S ribosomal protein S18P [Saccharomonospora viridis DSM 43017]
gi|256587750|gb|ACU98883.1| SSU ribosomal protein S18P [Saccharomonospora viridis DSM 43017]
Length = 82
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 21 CPLSGKGA----PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
C IDYKD +L +++S RGKI R++ + QR++A A+K +R +
Sbjct: 14 CVFCKAEKAGHPEPIDYKDTNMLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREMA 73
Query: 77 LIAYVN 82
L+ Y +
Sbjct: 74 LLPYTS 79
>gi|290958445|ref|YP_003489627.1| 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
gi|260647971|emb|CBG71076.1| putative 30S ribosomal protein S18 [Streptomyces scabiei 87.22]
Length = 77
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P R+ R PL IDYKD LL RF+S RGKI R++ VS ++QR+L
Sbjct: 2 PRKPERKPAKSR--PNPLDQAKITYIDYKDTDLLRRFISDRGKIRSRRVTRVSAQQQRQL 59
Query: 66 AKAIKRARYLGLIAYVN 82
A+AIK AR + L+ YV+
Sbjct: 60 ARAIKNAREMALLPYVS 76
>gi|239918783|ref|YP_002958341.1| SSU ribosomal protein S18P [Micrococcus luteus NCTC 2665]
gi|281414991|ref|ZP_06246733.1| 30S ribosomal protein S18 [Micrococcus luteus NCTC 2665]
gi|289706693|ref|ZP_06503041.1| ribosomal protein S18 [Micrococcus luteus SK58]
gi|259494814|sp|C5C7U9|RS18_MICLC RecName: Full=30S ribosomal protein S18
gi|239839990|gb|ACS31787.1| SSU ribosomal protein S18P [Micrococcus luteus NCTC 2665]
gi|289556613|gb|EFD49956.1| ribosomal protein S18 [Micrococcus luteus SK58]
Length = 79
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+A+K AR
Sbjct: 7 RKPKPKSNPLKAAKITEIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAVKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|302546721|ref|ZP_07299063.1| ribosomal protein S18 [Streptomyces hygroscopicus ATCC 53653]
gi|302464339|gb|EFL27432.1| ribosomal protein S18 [Streptomyces himastatinicus ATCC 53653]
Length = 80
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + R + PL G +DYK+ LL +F+S RGKI R++ V+ ++QR++A+AIK
Sbjct: 9 RRGAKRPRVNPLDAAGITYVDYKNTDLLRKFISDRGKIRSPRVTHVTRQQQRQIARAIKN 68
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 69 AREMALLPY 77
>gi|163842243|ref|YP_001626648.1| 30S ribosomal protein S18 [Renibacterium salmoninarum ATCC 33209]
gi|205616911|sp|A9WVL3|RS18_RENSM RecName: Full=30S ribosomal protein S18
gi|162955719|gb|ABY25234.1| SSU ribosomal protein S18P [Renibacterium salmoninarum ATCC
33209]
Length = 79
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ KS PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR
Sbjct: 7 RKPKPKSNPLKAADITVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|50843663|ref|YP_056890.1| 30S ribosomal protein S18 [Propionibacterium acnes KPA171202]
gi|282854508|ref|ZP_06263844.1| ribosomal protein S18 [Propionibacterium acnes J139]
gi|289425919|ref|ZP_06427671.1| ribosomal protein S18 [Propionibacterium acnes SK187]
gi|289428173|ref|ZP_06429872.1| ribosomal protein S18 [Propionibacterium acnes J165]
gi|295131751|ref|YP_003582414.1| ribosomal protein S18 [Propionibacterium acnes SK137]
gi|59798675|sp|Q6A5N1|RS18_PROAC RecName: Full=30S ribosomal protein S18
gi|50841265|gb|AAT83932.1| 30S ribosomal protein S18-1 [Propionibacterium acnes KPA171202]
gi|282582369|gb|EFB87750.1| ribosomal protein S18 [Propionibacterium acnes J139]
gi|289153695|gb|EFD02404.1| ribosomal protein S18 [Propionibacterium acnes SK187]
gi|289158653|gb|EFD06857.1| ribosomal protein S18 [Propionibacterium acnes J165]
gi|291375799|gb|ADD99653.1| ribosomal protein S18 [Propionibacterium acnes SK137]
gi|313765165|gb|EFS36529.1| ribosomal protein S18 [Propionibacterium acnes HL013PA1]
gi|313771567|gb|EFS37533.1| ribosomal protein S18 [Propionibacterium acnes HL074PA1]
gi|313794143|gb|EFS42163.1| ribosomal protein S18 [Propionibacterium acnes HL110PA1]
gi|313808599|gb|EFS47059.1| ribosomal protein S18 [Propionibacterium acnes HL087PA2]
gi|313811965|gb|EFS49679.1| ribosomal protein S18 [Propionibacterium acnes HL083PA1]
gi|313813951|gb|EFS51665.1| ribosomal protein S18 [Propionibacterium acnes HL025PA1]
gi|313817111|gb|EFS54825.1| ribosomal protein S18 [Propionibacterium acnes HL059PA1]
gi|313819056|gb|EFS56770.1| ribosomal protein S18 [Propionibacterium acnes HL046PA2]
gi|313821665|gb|EFS59379.1| ribosomal protein S18 [Propionibacterium acnes HL036PA1]
gi|313823801|gb|EFS61515.1| ribosomal protein S18 [Propionibacterium acnes HL036PA2]
gi|313826905|gb|EFS64619.1| ribosomal protein S18 [Propionibacterium acnes HL063PA1]
gi|313829276|gb|EFS66990.1| ribosomal protein S18 [Propionibacterium acnes HL063PA2]
gi|313832398|gb|EFS70112.1| ribosomal protein S18 [Propionibacterium acnes HL007PA1]
gi|313834169|gb|EFS71883.1| ribosomal protein S18 [Propionibacterium acnes HL056PA1]
gi|313839203|gb|EFS76917.1| ribosomal protein S18 [Propionibacterium acnes HL086PA1]
gi|314916830|gb|EFS80661.1| ribosomal protein S18 [Propionibacterium acnes HL005PA4]
gi|314919007|gb|EFS82838.1| ribosomal protein S18 [Propionibacterium acnes HL050PA1]
gi|314921162|gb|EFS84993.1| ribosomal protein S18 [Propionibacterium acnes HL050PA3]
gi|314921990|gb|EFS85821.1| ribosomal protein S18 [Propionibacterium acnes HL001PA1]
gi|314926141|gb|EFS89972.1| ribosomal protein S18 [Propionibacterium acnes HL036PA3]
gi|314932491|gb|EFS96322.1| ribosomal protein S18 [Propionibacterium acnes HL067PA1]
gi|314956280|gb|EFT00652.1| ribosomal protein S18 [Propionibacterium acnes HL027PA1]
gi|314958674|gb|EFT02776.1| ribosomal protein S18 [Propionibacterium acnes HL002PA1]
gi|314960980|gb|EFT05081.1| ribosomal protein S18 [Propionibacterium acnes HL002PA2]
gi|314965947|gb|EFT10046.1| ribosomal protein S18 [Propionibacterium acnes HL082PA2]
gi|314968804|gb|EFT12902.1| ribosomal protein S18 [Propionibacterium acnes HL037PA1]
gi|314975064|gb|EFT19159.1| ribosomal protein S18 [Propionibacterium acnes HL053PA1]
gi|314977475|gb|EFT21570.1| ribosomal protein S18 [Propionibacterium acnes HL045PA1]
gi|314979063|gb|EFT23157.1| ribosomal protein S18 [Propionibacterium acnes HL072PA2]
gi|314980730|gb|EFT24824.1| ribosomal protein S18 [Propionibacterium acnes HL110PA3]
gi|314985853|gb|EFT29945.1| ribosomal protein S18 [Propionibacterium acnes HL005PA1]
gi|314985957|gb|EFT30049.1| ribosomal protein S18 [Propionibacterium acnes HL005PA2]
gi|314989266|gb|EFT33357.1| ribosomal protein S18 [Propionibacterium acnes HL005PA3]
gi|315078286|gb|EFT50325.1| ribosomal protein S18 [Propionibacterium acnes HL053PA2]
gi|315081408|gb|EFT53384.1| ribosomal protein S18 [Propionibacterium acnes HL078PA1]
gi|315084952|gb|EFT56928.1| ribosomal protein S18 [Propionibacterium acnes HL027PA2]
gi|315087482|gb|EFT59458.1| ribosomal protein S18 [Propionibacterium acnes HL002PA3]
gi|315089610|gb|EFT61586.1| ribosomal protein S18 [Propionibacterium acnes HL072PA1]
gi|315090951|gb|EFT62927.1| ribosomal protein S18 [Propionibacterium acnes HL110PA4]
gi|315095174|gb|EFT67150.1| ribosomal protein S18 [Propionibacterium acnes HL060PA1]
gi|315096895|gb|EFT68871.1| ribosomal protein S18 [Propionibacterium acnes HL038PA1]
gi|315100045|gb|EFT72021.1| ribosomal protein S18 [Propionibacterium acnes HL059PA2]
gi|315102795|gb|EFT74771.1| ribosomal protein S18 [Propionibacterium acnes HL046PA1]
gi|315105293|gb|EFT77269.1| ribosomal protein S18 [Propionibacterium acnes HL050PA2]
gi|315107349|gb|EFT79325.1| ribosomal protein S18 [Propionibacterium acnes HL030PA1]
gi|315110503|gb|EFT82479.1| ribosomal protein S18 [Propionibacterium acnes HL030PA2]
gi|327328803|gb|EGE70563.1| ribosomal protein S18 [Propionibacterium acnes HL103PA1]
gi|327332994|gb|EGE74726.1| ribosomal protein S18 [Propionibacterium acnes HL096PA2]
gi|327333986|gb|EGE75701.1| ribosomal protein S18 [Propionibacterium acnes HL096PA3]
gi|327334405|gb|EGE76116.1| ribosomal protein S18 [Propionibacterium acnes HL097PA1]
gi|327448702|gb|EGE95356.1| ribosomal protein S18 [Propionibacterium acnes HL043PA1]
gi|327449106|gb|EGE95760.1| ribosomal protein S18 [Propionibacterium acnes HL043PA2]
gi|327450359|gb|EGE97013.1| ribosomal protein S18 [Propionibacterium acnes HL013PA2]
gi|327455518|gb|EGF02173.1| ribosomal protein S18 [Propionibacterium acnes HL087PA3]
gi|327456173|gb|EGF02828.1| ribosomal protein S18 [Propionibacterium acnes HL083PA2]
gi|327457576|gb|EGF04231.1| ribosomal protein S18 [Propionibacterium acnes HL092PA1]
gi|328756818|gb|EGF70434.1| ribosomal protein S18 [Propionibacterium acnes HL087PA1]
gi|328757706|gb|EGF71322.1| ribosomal protein S18 [Propionibacterium acnes HL020PA1]
gi|328759101|gb|EGF72717.1| ribosomal protein S18 [Propionibacterium acnes HL025PA2]
gi|328762210|gb|EGF75706.1| ribosomal protein S18 [Propionibacterium acnes HL099PA1]
gi|332676615|gb|AEE73431.1| 30S ribosomal protein S18 [Propionibacterium acnes 266]
Length = 79
Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGKI R++ +S + QR++A AIK
Sbjct: 5 QRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKIRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|302531300|ref|ZP_07283642.1| ribosomal protein S18 [Streptomyces sp. AA4]
gi|302440195|gb|EFL12011.1| ribosomal protein S18 [Streptomyces sp. AA4]
Length = 82
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 20 SCPLSGKGA----PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
C IDYKD LL +++S RGKI R++ + QR++A A+K +R +
Sbjct: 13 VCVFCKAEKKGRPETIDYKDTNLLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREM 72
Query: 76 GLIAYVN 82
L+ Y +
Sbjct: 73 ALLPYTS 79
>gi|152992022|ref|YP_001357743.1| 30S ribosomal protein S18 [Sulfurovum sp. NBC37-1]
gi|166222250|sp|A6Q7C7|RS18_SULNB RecName: Full=30S ribosomal protein S18
gi|151423883|dbj|BAF71386.1| 30S ribosomal protein S18 [Sulfurovum sp. NBC37-1]
Length = 87
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ +++ C + IDYKD+ L LS+R KI+P R++ + Q + AI
Sbjct: 1 MAERRKFKKRFCKYCEQKVDFIDYKDLNSLKFSLSERFKIMPRRLTGNCKRHQEMVTVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR LI Y+
Sbjct: 61 KRARQTALIPYI 72
>gi|118486185|gb|ABK94935.1| unknown [Populus trichocarpa]
Length = 266
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +RR R + C + + + D++++R L F++ G I+ R + +S K QR++A
Sbjct: 157 KPFVRRE--RRDEFCVTTAEVLSKADFRNVRFLANFITDAGIIIKRRQTGISAKAQRKVA 214
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + +
Sbjct: 215 REIKTARAFGLMPFTTM 231
>gi|317126703|ref|YP_004100815.1| 30S ribosomal protein S18P [Intrasporangium calvum DSM 43043]
gi|315590791|gb|ADU50088.1| SSU ribosomal protein S18P [Intrasporangium calvum DSM 43043]
Length = 78
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR + L+ Y
Sbjct: 14 NPLKAAKVENIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRLIATAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|330813905|ref|YP_004358144.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
gi|327487000|gb|AEA81405.1| ribosomal protein S6 [Candidatus Pelagibacter sp. IMCC9063]
Length = 93
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L ++ + KSCPLSGKGAP I+YK+I+LL +++S KI+PSRI++VS KQR L+K
Sbjct: 19 LFNKSTAKPNKSCPLSGKGAPEINYKNIKLLKKYVSDTAKILPSRITNVSFGKQRALSKE 78
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ YV
Sbjct: 79 IKKARVLALMPYVG 92
>gi|152968280|ref|YP_001364064.1| 30S ribosomal protein S18 [Kineococcus radiotolerans SRS30216]
gi|205558177|sp|A6WG61|RS18_KINRD RecName: Full=30S ribosomal protein S18
gi|151362797|gb|ABS05800.1| ribosomal protein S18 [Kineococcus radiotolerans SRS30216]
Length = 78
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++AKAIK AR + L+ Y
Sbjct: 14 NPLKAAKIEAVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAIKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|268679496|ref|YP_003303927.1| ribosomal protein S18 [Sulfurospirillum deleyianum DSM 6946]
gi|268617527|gb|ACZ11892.1| ribosomal protein S18 [Sulfurospirillum deleyianum DSM 6946]
Length = 88
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ RK C IDYKD ++L LS+R KI+P R++ + Q + AI
Sbjct: 1 MAEKRKFARKYCKYCEAKVEYIDYKDAKILRHSLSERYKIMPRRLTGNCKRHQEMVELAI 60
Query: 70 KRARYLGLIAYV 81
KRAR +I Y+
Sbjct: 61 KRARATAVIPYI 72
>gi|184201983|ref|YP_001856190.1| 30S ribosomal protein S18 [Kocuria rhizophila DC2201]
gi|205558187|sp|B2GJD6|RS18_KOCRD RecName: Full=30S ribosomal protein S18
gi|183582213|dbj|BAG30684.1| 30S ribosomal protein S18 [Kocuria rhizophila DC2201]
Length = 78
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ K PL IDYKD+ LL +F+S RGKI R++ VS ++QR++A+AIK AR
Sbjct: 7 RKPKPKQNPLKAADVTEIDYKDVALLRKFISDRGKIRARRVTGVSVQEQRKIAQAIKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|224418786|ref|ZP_03656792.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|253826691|ref|ZP_04869576.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|313142303|ref|ZP_07804496.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|253510097|gb|EES88756.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
gi|313131334|gb|EFR48951.1| 30S ribosomal protein S18 [Helicobacter canadensis MIT 98-5491]
Length = 85
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + ++ C + IDYKDI +L LS+R KI+P R++ S K Q + AI
Sbjct: 1 MAEKKRYSKRYCRYTESKIEFIDYKDIDMLKHSLSERYKIMPRRLTGNSKKWQERVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR + LI Y+
Sbjct: 61 KRARQMALIPYI 72
>gi|134097357|ref|YP_001103018.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|291009084|ref|ZP_06567057.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
gi|205556498|sp|A4F7R8|RS181_SACEN RecName: Full=30S ribosomal protein S18 1
gi|133909980|emb|CAM00092.1| 30S ribosomal protein S18 [Saccharopolyspora erythraea NRRL 2338]
Length = 81
Score = 96.1 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
RR R K L G ++D+KD LL RF+S RGKI R++ ++ ++QRE+A AI
Sbjct: 5 QRRGGQRRGKPNLLQRAGVVQVDWKDTDLLRRFISDRGKIRSRRVTGLTMQEQREVATAI 64
Query: 70 KRARYLGLIAY 80
K AR + L+ Y
Sbjct: 65 KNAREMALLPY 75
>gi|329935150|ref|ZP_08285141.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
gi|329305219|gb|EGG49077.1| 30S ribosomal protein S18 [Streptomyces griseoaurantiacus M045]
Length = 78
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ ++ + + PL G IDYKD LL +F+S RGKI R++ V+ ++QR++A A+K
Sbjct: 6 KPALARKNRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVNRQQQRQIATAVK 65
Query: 71 RARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 66 NAREMALLPYSS 77
>gi|290487250|gb|ADD30009.1| ribosomal protein S18 [Nerium oleander]
Length = 101
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--ESGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|26553570|ref|NP_757504.1| ribosomal protein S18 [Mycoplasma penetrans HF-2]
gi|59798909|sp|Q8EWT5|RS18_MYCPE RecName: Full=30S ribosomal protein S18
gi|26453576|dbj|BAC43908.1| ribosomal protein S18 [Mycoplasma penetrans HF-2]
Length = 154
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K C L KG +DYKD+ LL ++L+ KI +I+ K Q ++ AIKRA
Sbjct: 84 KQGRRKKFCKLCAKGQEHVDYKDVELLYKYLTPNLKIASRKITFACSKHQTRVSNAIKRA 143
Query: 73 RYLGLIAYV 81
R + LI +V
Sbjct: 144 RIVALIPFV 152
>gi|11466410|ref|NP_038414.1| ribosomal protein S18 [Mesostigma viride]
gi|12230596|sp|Q9MUP6|RR18_MESVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|7259553|gb|AAF43854.1|AF166114_66 ribosomal protein S18 [Mesostigma viride]
Length = 71
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RR++ P+ IDYK+I LL++F++++GKI+P R++++S K+QR + KAIK+AR
Sbjct: 2 TFSRRRTSPIK--PTDSIDYKNIDLLSQFITEQGKILPRRVNNISAKQQRAITKAIKQAR 59
Query: 74 YLGLIAYVN 82
+L L+ ++N
Sbjct: 60 FLTLLPFLN 68
>gi|290487240|gb|ADD30004.1| ribosomal protein S18 [Ehretia acuminata]
Length = 101
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S R++ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRKRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|34558166|ref|NP_907981.1| 30S ribosomal protein S18 [Wolinella succinogenes DSM 1740]
gi|59798816|sp|Q7MQZ9|RS18_WOLSU RecName: Full=30S ribosomal protein S18
gi|34483885|emb|CAE10881.1| HYPOTHETICAL PROTEIN-Ribosomal protein S18 [Wolinella
succinogenes]
Length = 85
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + ++ C + IDYKD+ +L LS+R KI+P R++ S + Q + AI
Sbjct: 1 MAEKKRYSKRYCKYTEAKIEFIDYKDVEMLKHSLSERYKIMPRRLTGNSKRWQERVEVAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ LI Y+
Sbjct: 61 KRARHMALIPYI 72
>gi|296274355|ref|YP_003656986.1| 30S ribosomal protein S18 [Arcobacter nitrofigilis DSM 7299]
gi|296098529|gb|ADG94479.1| ribosomal protein S18 [Arcobacter nitrofigilis DSM 7299]
Length = 85
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ + +K C + IDYK+ +L +S+RGKI+P R++ S + Q + AI
Sbjct: 1 MAERRKYGKKYCKYTEMKIDFIDYKNTEILKISMSERGKIMPRRLTGNSKRAQEMVELAI 60
Query: 70 KRARYLGLIAYV 81
KRAR++ L+ Y+
Sbjct: 61 KRARHMALVPYI 72
>gi|308179152|ref|YP_003918558.1| 30S ribosomal protein S18 [Arthrobacter arilaitensis Re117]
gi|307746615|emb|CBT77587.1| 30S ribosomal protein S18 [Arthrobacter arilaitensis Re117]
Length = 79
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ KS PL IDYKD LL +F+S RGKI R++ VS ++QR++A+AIK AR
Sbjct: 7 RKPKPKSNPLKAADITVIDYKDTALLRKFISDRGKIRARRVTGVSVQEQRKIAQAIKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|144514|gb|AAA23134.1| ribosomal protein S18 homolog [Chlamydia muridarum]
Length = 77
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR ++ CP G IDYKD+ L RF+++RGKI+P RI+ VS + Q LA+A+K
Sbjct: 10 RRKRFAKK--CPFVSAGWKTIDYKDVVTLKRFITERGKILPRRITGVSSRFQALLAQAVK 67
Query: 71 RARYLGLI 78
RAR++GL+
Sbjct: 68 RARHVGLL 75
>gi|256374753|ref|YP_003098413.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
gi|255919056|gb|ACU34567.1| ribosomal protein S18 [Actinosynnema mirum DSM 43827]
Length = 77
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + R++ L +G +D+KD LL +FLS RGKI R++ ++ ++QR++A A
Sbjct: 1 MPKPERVPRKRVNLLRREGVELVDWKDAALLRKFLSDRGKIRSRRVTGLTPQQQRQVATA 60
Query: 69 IKRARYLGLIAY 80
+K AR + L+ Y
Sbjct: 61 VKNAREMALLPY 72
>gi|256833731|ref|YP_003162458.1| 30S ribosomal protein S18 [Jonesia denitrificans DSM 20603]
gi|256687262|gb|ACV10155.1| ribosomal protein S18 [Jonesia denitrificans DSM 20603]
Length = 78
Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++KS PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR
Sbjct: 7 RKPKKKSNPLKSAKIDAVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIARAVKNAR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYSS 75
>gi|300791097|ref|YP_003771388.1| 30S ribosomal protein S18 [Amycolatopsis mediterranei U32]
gi|299800611|gb|ADJ50986.1| small subunit ribosomal protein S18 [Amycolatopsis mediterranei
U32]
Length = 82
Score = 95.3 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 20 SCPLSGKGA----PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
C IDYKD LL +++S RGKI R++ + QR++A A+K +R +
Sbjct: 13 VCVFCKAEKKGRPELIDYKDTNLLRKYISDRGKIRARRVTGNCSQHQRDIAIAVKNSREM 72
Query: 76 GLIAYVN 82
L+ Y +
Sbjct: 73 ALLPYTS 79
>gi|320095140|ref|ZP_08026848.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977922|gb|EFW09557.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 80
Score = 95.3 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIEKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 67 AREMALLPYSS 77
>gi|315605480|ref|ZP_07880518.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312826|gb|EFU60905.1| 30S ribosomal protein S18 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 80
Score = 95.3 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIDKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 67 AREMALLPYSS 77
>gi|257070269|ref|YP_003156524.1| 30S ribosomal protein S18 [Brachybacterium faecium DSM 4810]
gi|256561087|gb|ACU86934.1| SSU ribosomal protein S18P [Brachybacterium faecium DSM 4810]
Length = 78
Score = 95.3 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+LR+ ++K PL G +DYKD LL +F+S RGKI R++ V+ ++QR++A
Sbjct: 3 KPVLRKP---KKKQNPLKAAGLETVDYKDAALLRKFISDRGKIRARRVTGVTVQEQRKIA 59
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y
Sbjct: 60 KAVKNAREIALLPYST 75
>gi|309811311|ref|ZP_07705098.1| ribosomal protein S18 [Dermacoccus sp. Ellin185]
gi|308434618|gb|EFP58463.1| ribosomal protein S18 [Dermacoccus sp. Ellin185]
Length = 78
Score = 95.3 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL IDYKD LL +F+S RGKI R++ VS ++QR +A A+K AR + L+ Y
Sbjct: 14 NPLKAAKVENIDYKDAALLRKFISDRGKIRARRVTGVSVQEQRLIANAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|229822653|ref|YP_002884179.1| ribosomal protein S18 [Beutenbergia cavernae DSM 12333]
gi|259494802|sp|C5C659|RS18_BEUC1 RecName: Full=30S ribosomal protein S18
gi|229568566|gb|ACQ82417.1| ribosomal protein S18 [Beutenbergia cavernae DSM 12333]
Length = 78
Score = 95.3 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+LR+ ++KS PL IDYKD LL +F+S RGKI R++ VS ++QR +A
Sbjct: 3 KPVLRKP---KKKSNPLKSAKIEAIDYKDTVLLRKFISDRGKIRARRVTGVSVQEQRAIA 59
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 60 KAVKNAREMALLPYSS 75
>gi|254456332|ref|ZP_05069761.1| ribosomal protein S18 [Candidatus Pelagibacter sp. HTCC7211]
gi|207083334|gb|EDZ60760.1| ribosomal protein S18 [Candidatus Pelagibacter sp. HTCC7211]
Length = 90
Score = 95.3 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 58/77 (75%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A + + N +K+CPLS KGAP +DYK+IRLL +++S+ GKI+PSRI++VS KK
Sbjct: 14 SNFAKLSIFQPNKYKFKKNCPLSAKGAPAVDYKNIRLLKKYMSENGKILPSRITNVSQKK 73
Query: 62 QRELAKAIKRARYLGLI 78
QREL+ +IKRAR L L+
Sbjct: 74 QRELSLSIKRARNLALL 90
>gi|154508266|ref|ZP_02043908.1| hypothetical protein ACTODO_00762 [Actinomyces odontolyticus ATCC
17982]
gi|293191178|ref|ZP_06609111.1| ribosomal protein S18 [Actinomyces odontolyticus F0309]
gi|153797900|gb|EDN80320.1| hypothetical protein ACTODO_00762 [Actinomyces odontolyticus ATCC
17982]
gi|292820599|gb|EFF79568.1| ribosomal protein S18 [Actinomyces odontolyticus F0309]
Length = 80
Score = 95.3 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RN ++K+ PL +IDYKD LL +F+S RGKI R++ VS ++QR++A+A+K
Sbjct: 7 RNKPIKKKANPLKSAKIEKIDYKDTALLRKFISDRGKIRARRVTGVSTQEQRKIARAVKN 66
Query: 72 ARYLGLIAYVN 82
AR + L+ Y
Sbjct: 67 AREMALLPYST 77
>gi|295394868|ref|ZP_06805081.1| 30S ribosomal protein S18 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972201|gb|EFG48063.1| 30S ribosomal protein S18 [Brevibacterium mcbrellneri ATCC 49030]
Length = 99
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +R+ + ++K+ PL A IDYKD L +F+S RGKI R++ VS ++QR +A
Sbjct: 23 KPEIRKPI--KKKANPLKPGEAASIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRLIA 80
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 81 KAVKNAREMALLPYTS 96
>gi|303249180|ref|ZP_07335418.1| ribosomal protein S18 [Desulfovibrio fructosovorans JJ]
gi|302489403|gb|EFL49352.1| ribosomal protein S18 [Desulfovibrio fructosovorans JJ]
Length = 85
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYK +L F++ RGKI+ RI+ K QR L IKRAR + L+ Y
Sbjct: 14 CRFCANKNLPVDYKRPDILKDFVTDRGKIIARRITGTCAKCQRRLTVEIKRARQMALLYY 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|224438133|ref|ZP_03659068.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
gi|313144573|ref|ZP_07806766.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
gi|313129604|gb|EFR47221.1| 30S ribosomal protein S18 [Helicobacter cinaedi CCUG 18818]
Length = 84
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ +L LS+R KI+P R++ + + Q + AIKRA
Sbjct: 3 KKKYSKRYCRYTETKLEFIDYKDVEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI Y+
Sbjct: 63 RHMALIPYI 71
>gi|319760231|ref|YP_004124169.1| 30S ribosomal protein S18 [Candidatus Blochmannia vafer str.
BVAF]
gi|318038945|gb|ADV33495.1| 30S ribosomal protein S18 [Candidatus Blochmannia vafer str.
BVAF]
Length = 76
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
RK C + + +DYKD+ + + + GKI+PSRI+ K QR+LA+AIK ARYL L
Sbjct: 9 RKFCRFTAEKCTEVDYKDLVKIQSSIIENGKIIPSRITGTRSKYQRQLARAIKIARYLSL 68
Query: 78 IAYVN 82
+ Y +
Sbjct: 69 LPYTD 73
>gi|224510719|pdb|3FIH|R Chain R, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|251837152|pdb|3IY8|R Chain R, Leishmania Tarentolae Mitonchondrial Ribosome Small
Subunit
gi|294662234|pdb|2WWL|R Chain R, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387982|pdb|3OFO|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308388003|pdb|3OFP|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320040|pdb|3OFA|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320061|pdb|3OFB|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320144|pdb|3OFX|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320165|pdb|3OFY|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113629|pdb|3OAQ|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|315113650|pdb|3OAR|R Chain R, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of
The Second 70s Ribosome
Length = 55
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKDI L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +
Sbjct: 1 EIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTD 53
>gi|109946868|ref|YP_664096.1| 30S ribosomal protein S18 [Helicobacter acinonychis str. Sheeba]
gi|123173576|sp|Q17Z29|RS18_HELAH RecName: Full=30S ribosomal protein S18
gi|109714089|emb|CAJ99097.1| 30S ribosomal protein S18 [Helicobacter acinonychis str. Sheeba]
Length = 85
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRA
Sbjct: 3 KKRYSKRYCRYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI Y+
Sbjct: 63 RHMALIPYI 71
>gi|255326498|ref|ZP_05367580.1| ribosomal protein S18 [Rothia mucilaginosa ATCC 25296]
gi|283458977|ref|YP_003363626.1| 30S ribosomal protein S18 [Rothia mucilaginosa DY-18]
gi|300742675|ref|ZP_07072696.1| ribosomal protein S18 [Rothia dentocariosa M567]
gi|311112592|ref|YP_003983814.1| 30S ribosomal protein S18 [Rothia dentocariosa ATCC 17931]
gi|255296538|gb|EET75873.1| ribosomal protein S18 [Rothia mucilaginosa ATCC 25296]
gi|283135041|dbj|BAI65806.1| ribosomal protein S18 [Rothia mucilaginosa DY-18]
gi|300381860|gb|EFJ78422.1| ribosomal protein S18 [Rothia dentocariosa M567]
gi|310944086|gb|ADP40380.1| 30S ribosomal protein S18 [Rothia dentocariosa ATCC 17931]
Length = 78
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ K PL IDYKD+ LL +F+S RGKI R++ V+ ++QR++A+AIK AR
Sbjct: 7 RKPKPKQNPLKAADVTVIDYKDVALLRKFISDRGKIRARRVTGVTVQEQRKIAQAIKNAR 66
Query: 74 YLGLIAY 80
+ L+ Y
Sbjct: 67 EVALLPY 73
>gi|115372930|ref|ZP_01460234.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115370008|gb|EAU68939.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 109
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+E P R+ RRK PL +D+KD++LL F+++RG+++P R++ V+ ++
Sbjct: 30 SEDDRRPF--RSGVGRRKPNPL--GNVRTLDFKDVQLLKYFVTERGRLIPRRLTGVTAQQ 85
Query: 62 QRELAKAIKRARYLGLIAYV 81
QR++AKA+KRAR LGL+ ++
Sbjct: 86 QRQIAKAVKRARLLGLLPFL 105
>gi|296131515|ref|YP_003638765.1| ribosomal protein S18 [Cellulomonas flavigena DSM 20109]
gi|296023330|gb|ADG76566.1| ribosomal protein S18 [Cellulomonas flavigena DSM 20109]
Length = 78
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR + L+ Y
Sbjct: 14 NPLKAAKIETVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIARAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|239978061|ref|ZP_04700585.1| putative 30S ribosomal protein S18 [Streptomyces albus J1074]
gi|291449962|ref|ZP_06589352.1| 30S ribosomal protein S18 2 [Streptomyces albus J1074]
gi|291352911|gb|EFE79813.1| 30S ribosomal protein S18 2 [Streptomyces albus J1074]
Length = 79
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 9 LLRRNVSHRR----KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ RR+ + R+ + PL G IDYKD LL +FLS RGKI RI+ V+ ++QR+
Sbjct: 1 MARRSEAGRKPVKSRPNPLLAAGITYIDYKDTELLRKFLSDRGKIRSRRITRVTAQQQRQ 60
Query: 65 LAKAIKRARYLGLIAY 80
LA+A++ AR + L+ Y
Sbjct: 61 LARAVRNAREMALLPY 76
>gi|120406962|ref|YP_956791.1| 30S ribosomal protein S18 [Mycobacterium vanbaalenii PYR-1]
gi|205556618|sp|A1THY5|RS182_MYCVP RecName: Full=30S ribosomal protein S18 2
gi|119959780|gb|ABM16785.1| SSU ribosomal protein S18P [Mycobacterium vanbaalenii PYR-1]
Length = 87
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPR--IDYKDIRLLNRFLSQRGKIVPSRISSVS 58
MA+ + + + C K IDYKD +LL ++S+RGKI R++
Sbjct: 1 MAKSSTKRRPAPEKPVKTRKCVFCSKKGKNQDIDYKDTQLLRTYISERGKIRARRVTGNC 60
Query: 59 HKKQRELAKAIKRARYLGLIAYVN 82
+ QR++A A+K AR + L+ + +
Sbjct: 61 VQHQRDIAIAVKNAREVALLPFSS 84
>gi|288817693|ref|YP_003432040.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
gi|288787092|dbj|BAI68839.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
gi|308751291|gb|ADO44774.1| ribosomal protein S18 [Hydrogenobacter thermophilus TK-6]
Length = 72
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K+C + YK+ L +F+++RGKI+ R + V K QR L++ IKRAR L L
Sbjct: 8 KKACRFCEEKKDP-SYKNYEELRQFMTERGKIIGRRQTGVCAKHQRMLSREIKRARQLAL 66
Query: 78 IAYV 81
+ Y+
Sbjct: 67 LPYL 70
>gi|71083407|ref|YP_266126.1| 30S ribosomal protein S18 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762170|ref|ZP_01264135.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1002]
gi|123748053|sp|Q4FMR6|RS18_PELUB RecName: Full=30S ribosomal protein S18
gi|71062520|gb|AAZ21523.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1062]
gi|91717972|gb|EAS84622.1| ribosomal protein S18 [Candidatus Pelagibacter ubique HTCC1002]
Length = 92
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 58/77 (75%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+ A + + N +K+CPLS KGAP +DYK+IRLL +++S+ GKI+PSRI++VS KK
Sbjct: 16 SNFAKLSIFQPNKYKFKKTCPLSAKGAPEVDYKNIRLLKKYMSENGKILPSRITNVSQKK 75
Query: 62 QRELAKAIKRARYLGLI 78
QREL+ +IKRAR L LI
Sbjct: 76 QRELSLSIKRARNLALI 92
>gi|11465722|ref|NP_053866.1| ribosomal protein S18 [Porphyra purpurea]
gi|1710698|sp|P51256|RR18_PORPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1276722|gb|AAC08142.1| 30S ribosomal protein S18 [Porphyra purpurea]
Length = 70
Score = 94.9 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R+K P+ +DYKDI LL +F++++GKI+P R + ++ K+Q++L KAIK+AR L
Sbjct: 4 YRKKISPIK--PTEAVDYKDIDLLRKFITEQGKILPKRSTGLTSKQQKKLTKAIKQARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFLN 68
>gi|297201377|ref|ZP_06918774.1| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
gi|297147875|gb|EDY57819.2| ribosomal protein S18 [Streptomyces sviceus ATCC 29083]
Length = 77
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P R+ V R PL G +DYK+ LL +F+S RGKI R++ VS ++QR+L
Sbjct: 2 PRKPERKPVKDR--PNPLDAAGITYVDYKETDLLRKFVSDRGKIRSRRVTRVSAQQQRQL 59
Query: 66 AKAIKRARYLGLIAYVN 82
A+A+K AR + L+ Y +
Sbjct: 60 ARAVKNAREMALLPYSS 76
>gi|239907339|ref|YP_002954080.1| 30S ribosomal protein S18 [Desulfovibrio magneticus RS-1]
gi|259494807|sp|C4XGN6|RS18_DESMR RecName: Full=30S ribosomal protein S18
gi|239797205|dbj|BAH76194.1| 30S ribosomal protein S18 [Desulfovibrio magneticus RS-1]
Length = 85
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYK +L F++ RGKI+ RI+ K QR L IKRAR + L+ Y
Sbjct: 14 CRFCANKNLPVDYKRPDILKDFITDRGKIIARRITGTCAKCQRRLTLEIKRARQMALLYY 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|145221470|ref|YP_001132148.1| 30S ribosomal protein S18 [Mycobacterium gilvum PYR-GCK]
gi|315446778|ref|YP_004079657.1| 30S ribosomal protein S18P [Mycobacterium sp. Spyr1]
gi|205556373|sp|A4T4N9|RS181_MYCGI RecName: Full=30S ribosomal protein S18 1
gi|145213956|gb|ABP43360.1| SSU ribosomal protein S18P [Mycobacterium gilvum PYR-GCK]
gi|315265081|gb|ADU01823.1| SSU ribosomal protein S18P [Mycobacterium sp. Spyr1]
Length = 88
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPR--IDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ P + V R+ C K IDYKD +LL ++S+RGKI R++
Sbjct: 5 SSTKRRPAPEKPVKTRK--CVFCSKKGKNQVIDYKDTQLLRTYISERGKIRARRVTGNCV 62
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
+ QR++A A+K AR + L+ + +
Sbjct: 63 QHQRDIAIAVKNAREVALLPFSS 85
>gi|169627435|ref|YP_001701084.1| 30S ribosomal protein S18 [Mycobacterium abscessus ATCC 19977]
gi|169239402|emb|CAM60430.1| 30S ribosomal protein S18.2 [Mycobacterium abscessus]
Length = 82
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 6 PTPLLRRNV---SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
TP RR + K + G +DYKD L FLS+RGKI R++ ++ ++Q
Sbjct: 4 KTPRNRRAKLVDTKPAKPNLFAKLGVSSVDYKDTNTLRMFLSERGKIRSRRVTGLTVQQQ 63
Query: 63 RELAKAIKRARYLGLIAY 80
R++A AIK AR + L+ Y
Sbjct: 64 RQVANAIKNAREMALLPY 81
>gi|15805141|ref|NP_293827.1| 30S ribosomal protein S18 [Deinococcus radiodurans R1]
gi|11387111|sp|Q9RY50|RS18_DEIRA RecName: Full=30S ribosomal protein S18
gi|6457767|gb|AAF09693.1|AE001873_3 ribosomal protein S18 [Deinococcus radiodurans R1]
Length = 92
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ K P S DYKD+++L RF+S GKI+P R + +S K QR +A+ IK A
Sbjct: 18 KRPRKPKVDPFSIGELEITDYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRIAQTIKVA 77
Query: 73 RYLGLIAYVN 82
R L L+ Y
Sbjct: 78 RQLALLPYTE 87
>gi|86609095|ref|YP_477857.1| 30S ribosomal protein S18 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123724452|sp|Q2JL28|RS18_SYNJB RecName: Full=30S ribosomal protein S18
gi|86557637|gb|ABD02594.1| ribosomal protein S18 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 71
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ P+ I Y D+ LL +F+++RGKI+P RI+ ++ K+QREL AIKRAR +G
Sbjct: 5 RRRLSPIK--PGEPIRYTDVELLKKFVTERGKILPRRITGLTAKQQRELTAAIKRARIMG 62
Query: 77 LIAYVN 82
L+ +VN
Sbjct: 63 LLYFVN 68
>gi|269958121|ref|YP_003327910.1| 30S ribosomal protein S18 [Xylanimonas cellulosilytica DSM 15894]
gi|269306802|gb|ACZ32352.1| ribosomal protein S18 [Xylanimonas cellulosilytica DSM 15894]
Length = 78
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++AKA+K AR + L+ Y
Sbjct: 14 NPLKTAKIESVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRQIAKAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|269217871|ref|ZP_06161725.1| ribosomal protein S18 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212806|gb|EEZ79146.1| ribosomal protein S18 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 78
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+LR+ ++K+ PL IDYKD L +F+S RGKI R++ V+ ++QR++A
Sbjct: 3 KPVLRKP---KKKANPLKSAKIENIDYKDTATLRKFISDRGKIRARRVTGVTVQEQRKIA 59
Query: 67 KAIKRARYLGLIAYVN 82
+A+K AR + L+ Y +
Sbjct: 60 RAVKNAREMALLPYSS 75
>gi|294633130|ref|ZP_06711689.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
gi|292830911|gb|EFF89261.1| 30S ribosomal protein S18 [Streptomyces sp. e14]
Length = 78
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ ++ + + PL G IDYKD LL +F+S RGKI R++ +S ++QR+LA A+K
Sbjct: 6 KATLARKNRPNPLDAAGITYIDYKDTELLRKFISDRGKIRSRRVTRISRRQQRQLAAAVK 65
Query: 71 RARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 66 NAREMALLPYSS 77
>gi|328949624|ref|YP_004366959.1| 30S ribosomal protein S18 [Marinithermus hydrothermalis DSM
14884]
gi|328449948|gb|AEB10849.1| 30S ribosomal protein S18 [Marinithermus hydrothermalis DSM
14884]
Length = 84
Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
++ R + K C DY++ +L RFLS+ GKI+P R + V K QR
Sbjct: 1 MSTKRASRPRRFRKPKVCQFCTGELEITDYRNREMLMRFLSETGKILPRRRTGVCAKHQR 60
Query: 64 ELAKAIKRARYLGLIAYVN 82
LA+ IKRAR L ++ +
Sbjct: 61 RLAQMIKRARILAIVPFTE 79
>gi|313803266|gb|EFS44462.1| ribosomal protein S18 [Propionibacterium acnes HL110PA2]
gi|314964040|gb|EFT08140.1| ribosomal protein S18 [Propionibacterium acnes HL082PA1]
Length = 79
Score = 94.6 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+R +++K P+ +DYKD LL +F+S+RGK+ R++ +S + QR++A AIK
Sbjct: 5 QRKSVNKKKVVPIKTVHIGAVDYKDTALLRKFISERGKVRARRVTGLSVQDQRKVAIAIK 64
Query: 71 RARYLGLIAYVN 82
AR L L+ Y +
Sbjct: 65 NARELALLPYAS 76
>gi|186914926|gb|ACC95219.1| ribosomal protein S18 [Eudianthe laeta]
Length = 101
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILALLPFLN 79
>gi|332672266|ref|YP_004455274.1| 30S ribosomal protein S18 [Cellulomonas fimi ATCC 484]
gi|332341304|gb|AEE47887.1| ribosomal protein S18 [Cellulomonas fimi ATCC 484]
Length = 78
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K PL +DYKD LL +F+S RGKI R++ VS ++QR +A+A+K AR
Sbjct: 7 RKPKKKQNPLKAAKIESVDYKDTALLRKFISDRGKIRARRVTGVSVQEQRAIARAVKNAR 66
Query: 74 YLGLIAYVN 82
+ L+ Y +
Sbjct: 67 EMALLPYSS 75
>gi|299830348|ref|YP_003734563.1| ribosomal protein S18 [Kryptoperidinium foliaceum]
gi|297385050|gb|ADI40348.1| ribosomal protein S18 [Kryptoperidinium foliaceum]
Length = 72
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RK P+S +IDYKDI LL+ F++++GKI+P R + V+ ++QR+L+KAIKRAR L
Sbjct: 4 KKRKVSPISLN--QKIDYKDIDLLSLFVTEQGKILPRRATGVTIQQQRKLSKAIKRARVL 61
Query: 76 GLIAYV 81
L +V
Sbjct: 62 SLFPFV 67
>gi|116327958|ref|YP_797678.1| 30S ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330839|ref|YP_800557.1| 30S ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|59798774|sp|Q72QK2|RS18_LEPIC RecName: Full=30S ribosomal protein S18
gi|73920774|sp|Q8F5K4|RS18_LEPIN RecName: Full=30S ribosomal protein S18
gi|122281407|sp|Q04TH1|RS18_LEPBJ RecName: Full=30S ribosomal protein S18
gi|122284250|sp|Q052K0|RS18_LEPBL RecName: Full=30S ribosomal protein S18
gi|45601200|gb|AAS70682.1| 30S ribosomal protein S18 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|116120702|gb|ABJ78745.1| 30S Ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124528|gb|ABJ75799.1| 30S Ribosomal protein S18 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 81
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 10 LRRNVSHRRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
R+ +++K C + A +I+YK+I LL RF++ RGKI+P RI+ S + QR LA+
Sbjct: 6 QRKQNKYKKKVCRFTADPELAKQINYKNIELLERFITNRGKIIPRRITGTSARYQRVLAR 65
Query: 68 AIKRARYLGLIAY 80
I++AR +GL+ Y
Sbjct: 66 EIRKARSIGLLPY 78
>gi|111219980|ref|YP_710774.1| 30S ribosomal protein S18-2 [Frankia alni ACN14a]
gi|123143639|sp|Q0RTD6|RS181_FRAAA RecName: Full=30S ribosomal protein S18 1
gi|111147512|emb|CAJ59165.1| 30S ribosomal protein S18-2 [Frankia alni ACN14a]
Length = 84
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K L +G +DYKD+ LL +F+S RGKI RI+ ++ ++ RE+ +AIK A
Sbjct: 8 KPGQRKKPNILRERGITYVDYKDVALLRQFISDRGKIRARRITGLTPRQHREVTRAIKNA 67
Query: 73 RYLGLIAY 80
R + L+ Y
Sbjct: 68 REMALLPY 75
>gi|255628869|gb|ACU14779.1| unknown [Glycine max]
Length = 96
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + ++ S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFMKSKRSFRRRLPPI--QSGDRIDYKNMGLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|224178092|ref|YP_002600903.1| ribosomal protein S18 [Pyramimonas parkeae]
gi|215882759|gb|ACJ71132.1| ribosomal protein S18 [Pyramimonas parkeae]
Length = 68
Score = 94.2 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
+ K P+ IDYK+I LL +F++++GKI+P R++ ++ K+QR + KAIK+AR +G
Sbjct: 2 KNKFSPIK--SGELIDYKNIDLLRKFVTEQGKILPRRVTRLNAKQQRLVTKAIKQARVIG 59
Query: 77 LIAYVN 82
+ +VN
Sbjct: 60 SLPFVN 65
>gi|124514468|gb|EAY55981.1| ribosomal protein S18 [Leptospirillum rubarum]
gi|206602643|gb|EDZ39124.1| Ribosomal protein S18 [Leptospirillum sp. Group II '5-way CG']
Length = 76
Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+K C + IDYKDI + FL++RGKI+P R+S + QR LA AIK+ R
Sbjct: 8 FQRKKVCRFCIEKLE-IDYKDINTMKGFLTERGKIIPRRLSGTCSRHQRGLAAAIKQGRN 66
Query: 75 LGLIAY 80
+ A+
Sbjct: 67 VAFFAF 72
>gi|22711969|ref|NP_683799.1| ribosomal protein S18 [Chaetosphaeridium globosum]
gi|25009146|sp|Q8M9Y7|RR18_CHAGL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|22416973|gb|AAM96573.1| ribosomal protein S18 [Chaetosphaeridium globosum]
Length = 79
Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R RR+ P+ IDYK++ LL RF+S++GKI+ R++ ++ K+QR + KAIK
Sbjct: 7 RSKRMSRRRLAPIRA--GESIDYKNVGLLRRFISEQGKILSRRVNRLTAKQQRNMTKAIK 64
Query: 71 RARYLGLIAYVN 82
RAR L L+ ++N
Sbjct: 65 RARILALLPFLN 76
>gi|86606307|ref|YP_475070.1| 30S ribosomal protein S18 [Synechococcus sp. JA-3-3Ab]
gi|123724575|sp|Q2JU22|RS18_SYNJA RecName: Full=30S ribosomal protein S18
gi|86554849|gb|ABC99807.1| ribosomal protein S18 [Synechococcus sp. JA-3-3Ab]
Length = 71
Score = 94.2 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ P+ I Y D+ LL +F+++RGKI+P RI+ ++ K+QR+++KAIK+AR LG
Sbjct: 5 RRRLSPIK--PGEPIKYTDVELLKKFVTERGKILPRRITGLTAKQQRQVSKAIKQARILG 62
Query: 77 LIAYVN 82
L+ +VN
Sbjct: 63 LLYFVN 68
>gi|323149104|ref|YP_004222668.1| ribosomal protein S18 [Anthriscus cerefolium]
gi|289645597|gb|ADD13660.1| ribosomal protein S18 [Anthriscus cerefolium]
Length = 101
Score = 93.8 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|223931053|ref|YP_002586914.1| ribosomal protein S18 [Syntrichia ruralis]
gi|219562267|gb|ACL27598.1| ribosomal protein S18 [Syntrichia ruralis]
Length = 75
Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKSKRSSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMTRLTSKQQRLMTIA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARVLALLPFLN 72
>gi|290487270|gb|ADD30019.1| ribosomal protein S18 [Heuchera sanguinea]
Length = 101
Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|269797041|ref|YP_003316496.1| 30S ribosomal protein S18P [Sanguibacter keddieii DSM 10542]
gi|269099226|gb|ACZ23662.1| SSU ribosomal protein S18P [Sanguibacter keddieii DSM 10542]
Length = 78
Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
PL +DYKD LL +F+S RGKI R++ VS ++QR++A+A+K AR + L+ Y
Sbjct: 14 NPLKSAKIETVDYKDTALLRKFISDRGKIRARRVTGVSTQEQRQIARAVKNAREMALLPY 73
Query: 81 VN 82
+
Sbjct: 74 SS 75
>gi|299830553|ref|YP_003735001.1| 30S ribosomal protein S18 [Durinskia baltica]
gi|297384917|gb|ADI40216.1| 30S ribosomal protein S18 [Durinskia baltica]
Length = 72
Score = 93.8 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+RK P+S +IDYKDI LL F++++GKI+P R + V+ ++QR+L+KAIKRAR L
Sbjct: 4 KKRKVSPISFN--QKIDYKDIDLLTLFVTEQGKILPRRATGVTVQQQRKLSKAIKRARVL 61
Query: 76 GLIAYV 81
L +V
Sbjct: 62 SLFPFV 67
>gi|227494167|ref|ZP_03924483.1| ribosomal protein S18 [Actinomyces coleocanis DSM 15436]
gi|226831901|gb|EEH64284.1| ribosomal protein S18 [Actinomyces coleocanis DSM 15436]
Length = 79
Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P LR+ + ++K+ PL IDYKD LL +F+S RGKI R++ VS + QR +A
Sbjct: 3 KPQLRKPL--KKKANPLRTAKIENIDYKDTALLRKFISDRGKIRARRVTGVSVQDQRRIA 60
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 61 KAVKNAREMALLPYSS 76
>gi|290487236|gb|ADD30002.1| ribosomal protein S18 [Aucuba japonica]
Length = 101
Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|189183704|ref|YP_001937489.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Ikeda]
gi|229560049|sp|B3CRZ8|RS18_ORITI RecName: Full=30S ribosomal protein S18
gi|189180475|dbj|BAG40255.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Ikeda]
Length = 102
Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 14 VSHRRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RRK CPLS AP I YKD LL++F+S+ G+++P+R+++V KQREL KAIK
Sbjct: 30 FFRRRKGCPLSAPDGTAPIITYKDPDLLSKFISECGRVLPARVTNVCRSKQRELTKAIKI 89
Query: 72 ARYLGLIAYV 81
AR L L+ +V
Sbjct: 90 ARELALLPFV 99
>gi|283794990|ref|YP_003359381.1| ribosomal protein S18 [Olea europaea]
gi|330850765|ref|YP_004376443.1| ribosomal protein S18 [Olea europaea subsp. europaea]
gi|110456626|gb|ABG74753.1| ribosomal protein S18 [Forsythia europaea]
gi|110456697|gb|ABG74806.1| ribosomal protein S18 [Jasminum abyssinicum]
gi|281428709|gb|ADA69948.1| ribosomal protein S18 [Olea europaea]
gi|290487234|gb|ADD30001.1| ribosomal protein S18 [Antirrhinum majus]
gi|291059275|gb|ADD72111.1| ribosomal protein S18 [Olea europaea]
gi|328795455|emb|CBR30337.1| ribosomal protein S18 [Olea europaea subsp. europaea]
Length = 101
Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|114107155|ref|YP_740139.1| ribosomal protein S18 [Daucus carota]
gi|122233831|sp|Q0G9U0|RR18_DAUCA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113200930|gb|ABI32446.1| ribosomal protein S18 [Daucus carota]
gi|156574736|gb|ABU85200.1| ribosomal protein S18 [Anethum graveolens]
Length = 101
Score = 93.8 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|226354820|ref|YP_002784560.1| 30S ribosomal protein S18 [Deinococcus deserti VCD115]
gi|259494805|sp|C1CXK0|RS18_DEIDV RecName: Full=30S ribosomal protein S18
gi|226316810|gb|ACO44806.1| putative 30S ribosomal protein S18 [Deinococcus deserti VCD115]
Length = 92
Score = 93.4 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ K P S DYKD+++L RF+S GKI+P R + +S K QR +A+ IK A
Sbjct: 18 KRPRKPKVDPFSIGELEITDYKDVKMLRRFVSDTGKILPRRRTGLSAKHQRRIAQTIKVA 77
Query: 73 RYLGLIAYVN 82
R L L+ Y
Sbjct: 78 RQLALLPYTE 87
>gi|227876513|ref|ZP_03994625.1| possible ribosomal protein S18 [Mobiluncus mulieris ATCC 35243]
gi|269977715|ref|ZP_06184675.1| ribosomal protein S18 [Mobiluncus mulieris 28-1]
gi|306817474|ref|ZP_07451218.1| 30S ribosomal protein S18 [Mobiluncus mulieris ATCC 35239]
gi|307699854|ref|ZP_07636905.1| ribosomal protein S18 [Mobiluncus mulieris FB024-16]
gi|227843054|gb|EEJ53251.1| possible ribosomal protein S18 [Mobiluncus mulieris ATCC 35243]
gi|269934019|gb|EEZ90593.1| ribosomal protein S18 [Mobiluncus mulieris 28-1]
gi|304649698|gb|EFM46979.1| 30S ribosomal protein S18 [Mobiluncus mulieris ATCC 35239]
gi|307614892|gb|EFN94110.1| ribosomal protein S18 [Mobiluncus mulieris FB024-16]
Length = 81
Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ R+K P+ IDYKD LL +F+S RGKI R++ V+ ++QR +AKA+K
Sbjct: 7 KSKPISRKKFTPVKAHKVGPIDYKDTALLRKFISDRGKIRARRVTGVTTQEQRLIAKAVK 66
Query: 71 RARYLGLIAYVN 82
AR + L+ Y +
Sbjct: 67 NAREMALLPYSS 78
>gi|118411014|ref|YP_874409.1| 30S ribosomal protein S18 [Phaeodactylum tricornutum]
gi|125987696|sp|A0T0D4|RR18_PHATC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116739761|gb|ABK20632.1| 30S ribosomal protein S18 [Phaeodactylum tricornutum]
Length = 72
Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
VS ++K P+S IDYKDI LL F++++GKI+P R + V+ ++QR LAKAIKRAR
Sbjct: 2 VSKKQKLSPISLN--QNIDYKDIDLLTLFVTEQGKILPRRATGVTVQQQRRLAKAIKRAR 59
Query: 74 YLGLIAYV 81
L L +V
Sbjct: 60 VLSLFPFV 67
>gi|212715366|ref|ZP_03323494.1| hypothetical protein BIFCAT_00260 [Bifidobacterium catenulatum
DSM 16992]
gi|225352542|ref|ZP_03743565.1| hypothetical protein BIFPSEUDO_04165 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212661672|gb|EEB22247.1| hypothetical protein BIFCAT_00260 [Bifidobacterium catenulatum
DSM 16992]
gi|225156736|gb|EEG70130.1| hypothetical protein BIFPSEUDO_04165 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 82
Score = 93.4 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ VS ++QRELAKAIK AR + L+ Y
Sbjct: 22 AAKVTEIDYKDVALLRKFISDRGKIRSRRITGVSVQEQRELAKAIKNAREMALLPYAT 79
>gi|321309535|ref|YP_004191864.1| 30S ribosomal protein S18 [Mycoplasma haemofelis str. Langford 1]
gi|319801379|emb|CBY92025.1| ribosomal protein S18 [Mycoplasma haemofelis str. Langford 1]
Length = 94
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L G IDYK+ L R+L KI+ +I+ + Q ++A AIKRAR + L+
Sbjct: 32 VCWLCKWGCLHIDYKNTDFLKRYLKNN-KIITHKITGNCLRHQHQIAFAIKRARVVALLP 90
Query: 80 YVN 82
+V
Sbjct: 91 FVG 93
>gi|330850819|ref|YP_004376569.1| 30S ribosomal protein S18 [Fistulifera sp. JPCC DA0580]
gi|328835639|dbj|BAK18935.1| 30S ribosomal protein S18 [Fistulifera sp. JPCC DA0580]
Length = 70
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+IDYKDI LL+ F++++GKI+P R + V+ ++QR+LAKAIKRAR L L ++
Sbjct: 15 QKIDYKDIDLLSLFVTEQGKILPRRATGVTVQQQRKLAKAIKRARILSLFPFI 67
>gi|120406438|ref|YP_956267.1| 30S ribosomal protein S18 [Mycobacterium vanbaalenii PYR-1]
gi|205556439|sp|A1TGG1|RS181_MYCVP RecName: Full=30S ribosomal protein S18 1
gi|119959256|gb|ABM16261.1| SSU ribosomal protein S18P [Mycobacterium vanbaalenii PYR-1]
Length = 83
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
T R +++ L G R+DYKD L +F+S+RGKI ++ ++ ++QR++
Sbjct: 2 TARRREAAPAKKRRNLLKSLGIERVDYKDTSTLRQFISERGKIRSRSVTGLTVQQQRQVT 61
Query: 67 KAIKRARYLGLIAY 80
A+K AR + L+ Y
Sbjct: 62 TAVKTAREMALLPY 75
>gi|15612230|ref|NP_223883.1| 30S ribosomal protein S18 [Helicobacter pylori J99]
gi|15645858|ref|NP_208036.1| 30S ribosomal protein S18 [Helicobacter pylori 26695]
gi|108563612|ref|YP_627928.1| 30S ribosomal protein S18 [Helicobacter pylori HPAG1]
gi|207092389|ref|ZP_03240176.1| 30S ribosomal protein S18 [Helicobacter pylori HPKX_438_AG0C1]
gi|208435139|ref|YP_002266805.1| ribosomal protein S18 [Helicobacter pylori G27]
gi|210135403|ref|YP_002301842.1| 30S ribosomal protein S18 [Helicobacter pylori P12]
gi|217032303|ref|ZP_03437799.1| hypothetical protein HPB128_132g1 [Helicobacter pylori B128]
gi|217033565|ref|ZP_03438993.1| hypothetical protein HP9810_899g1 [Helicobacter pylori 98-10]
gi|254779787|ref|YP_003057893.1| 30S ribosomal protein S18 [Helicobacter pylori B38]
gi|298735732|ref|YP_003728257.1| 30S ribosomal protein S18 [Helicobacter pylori B8]
gi|308183354|ref|YP_003927481.1| 30S ribosomal protein S18 [Helicobacter pylori PeCan4]
gi|308184991|ref|YP_003929124.1| 30S ribosomal protein S18 [Helicobacter pylori SJM180]
gi|54039412|sp|P66460|RS18_HELPJ RecName: Full=30S ribosomal protein S18
gi|54042147|sp|P66459|RS18_HELPY RecName: Full=30S ribosomal protein S18
gi|123073734|sp|Q1CS18|RS18_HELPH RecName: Full=30S ribosomal protein S18
gi|229559988|sp|B6JN84|RS18_HELP2 RecName: Full=30S ribosomal protein S18
gi|229559989|sp|B5Z8P0|RS18_HELPG RecName: Full=30S ribosomal protein S18
gi|2314410|gb|AAD08290.1| ribosomal protein S18 (rps18) [Helicobacter pylori 26695]
gi|4155773|gb|AAD06750.1| 30S RIBOSOMAL PROTEIN S18 [Helicobacter pylori J99]
gi|107837385|gb|ABF85254.1| ribosomal protein S18 [Helicobacter pylori HPAG1]
gi|208433068|gb|ACI27939.1| ribosomal protein S18 [Helicobacter pylori G27]
gi|210133371|gb|ACJ08362.1| 30S ribosomal protein S18 [Helicobacter pylori P12]
gi|216943911|gb|EEC23345.1| hypothetical protein HP9810_899g1 [Helicobacter pylori 98-10]
gi|216945969|gb|EEC24583.1| hypothetical protein HPB128_132g1 [Helicobacter pylori B128]
gi|254001699|emb|CAX29930.1| 30S ribosomal subunit protein S18 [Helicobacter pylori B38]
gi|261838567|gb|ACX98333.1| ribosomal protein S18 [Helicobacter pylori 51]
gi|261839963|gb|ACX99728.1| 30S ribosomal protein S18 [Helicobacter pylori 52]
gi|297380424|gb|ADI35311.1| ribosomal protein S18 [Helicobacter pylori v225d]
gi|298354921|emb|CBI65793.1| small subunit ribosomal protein S18 [Helicobacter pylori B8]
gi|308060911|gb|ADO02807.1| 30S ribosomal protein S18 [Helicobacter pylori SJM180]
gi|308062527|gb|ADO04415.1| 30S ribosomal protein S18 [Helicobacter pylori Cuz20]
gi|308064024|gb|ADO05911.1| 30S ribosomal protein S18 [Helicobacter pylori Sat464]
gi|308065539|gb|ADO07431.1| 30S ribosomal protein S18 [Helicobacter pylori PeCan4]
gi|315587135|gb|ADU41516.1| 30S ribosomal protein S18 [Helicobacter pylori 35A]
gi|317009928|gb|ADU80508.1| 30S ribosomal protein S18 [Helicobacter pylori India7]
gi|317011444|gb|ADU85191.1| 30S ribosomal protein S18 [Helicobacter pylori SouthAfrica7]
gi|317013030|gb|ADU83638.1| 30S ribosomal protein S18 [Helicobacter pylori Lithuania75]
gi|317014635|gb|ADU82071.1| 30S ribosomal protein S18 [Helicobacter pylori Gambia94/24]
gi|317177986|dbj|BAJ55775.1| 30S ribosomal protein S18 [Helicobacter pylori F16]
gi|317178462|dbj|BAJ56250.1| 30S ribosomal protein S18 [Helicobacter pylori F30]
gi|317180970|dbj|BAJ58756.1| 30S ribosomal protein S18 [Helicobacter pylori F32]
gi|317182493|dbj|BAJ60277.1| 30S ribosomal protein S18 [Helicobacter pylori F57]
gi|325996519|gb|ADZ51924.1| 30S ribosomal protein S18 [Helicobacter pylori 2018]
gi|325998107|gb|ADZ50315.1| 30S ribosomal protein S18 [Helicobacter pylori 2017]
gi|332674047|gb|AEE70864.1| 30S ribosomal protein S18 [Helicobacter pylori 83]
Length = 85
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRA
Sbjct: 3 RKRYSKRYCKYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI Y+
Sbjct: 63 RHMALIPYI 71
>gi|11497549|ref|NP_054957.1| ribosomal protein S18 [Spinacia oleracea]
gi|18203259|sp|Q9M3K7|RR18_SPIOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|7636130|emb|CAB88750.1| ribosomal protein S18 [Spinacia oleracea]
Length = 101
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITSAIKQARILSLLPFLN 79
>gi|94984272|ref|YP_603636.1| 30S ribosomal protein S18 [Deinococcus geothermalis DSM 11300]
gi|122986733|sp|Q1J217|RS18_DEIGD RecName: Full=30S ribosomal protein S18
gi|94554553|gb|ABF44467.1| ribosomal protein S18 [Deinococcus geothermalis DSM 11300]
Length = 91
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 2 AEVAPTPLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ P + R+ K P S DYKD+++L RF+S GKI+P R + +S K
Sbjct: 5 SNTERKPRAKGPKRPRKPKVDPFSIGELEITDYKDVKMLRRFISDTGKILPRRRTGLSAK 64
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
QR +++ IK AR L L+ Y
Sbjct: 65 HQRRISQTIKIARQLALLPYTE 86
>gi|11467816|ref|NP_050867.1| ribosomal protein S18 [Nephroselmis olivacea]
gi|20978742|sp|Q9TKX8|RR18_NEPOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|5880745|gb|AAD54838.1|AF137379_61 ribosomal protein S18 [Nephroselmis olivacea]
Length = 73
Score = 93.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RR+ L+ RIDYK++ LL +FL++ GKI+P R++ ++ K+QR + +AIK+AR
Sbjct: 4 FSRRRLAKLANAQIDDRIDYKNVDLLRQFLTEEGKILPRRVTGLTAKQQRGMTRAIKQAR 63
Query: 74 YLGLIAYVN 82
+ L+ +++
Sbjct: 64 IMALLEFIH 72
>gi|325282628|ref|YP_004255169.1| 30S ribosomal protein S18 [Deinococcus proteolyticus MRP]
gi|324314437|gb|ADY25552.1| 30S ribosomal protein S18 [Deinococcus proteolyticus MRP]
Length = 88
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MAEVAPTPLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
M + P + R+ K P S DYKD+++L RF+S GKI+P R + +S
Sbjct: 1 MTKPDRKPRGKGPKRPRKPKVDPFSIGELEITDYKDVKMLRRFVSDTGKILPRRRTGLSA 60
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
K QR +++ IK AR + L+ Y
Sbjct: 61 KHQRRISQTIKVARQMALLPYTE 83
>gi|148284318|ref|YP_001248408.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Boryong]
gi|205616184|sp|A5CCY6|RS18_ORITB RecName: Full=30S ribosomal protein S18
gi|146739757|emb|CAM79615.1| 30S ribosomal protein S18 [Orientia tsutsugamushi str. Boryong]
Length = 102
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 14 VSHRRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
RRK CPLS AP I YKD LL++F+S+ G+++P+R+++V KQREL KAIK
Sbjct: 30 FFRRRKGCPLSAPDGTAPIITYKDPDLLSKFISECGRVLPARVTNVCRSKQRELTKAIKI 89
Query: 72 ARYLGLIAYV 81
AR L L+ +V
Sbjct: 90 ARELALLPFV 99
>gi|188036219|pdb|3BBN|R Chain R, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 103
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITSAIKQARILSLLPFLN 79
>gi|283850177|ref|ZP_06367466.1| ribosomal protein S18 [Desulfovibrio sp. FW1012B]
gi|283574203|gb|EFC22174.1| ribosomal protein S18 [Desulfovibrio sp. FW1012B]
Length = 85
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C +DYK +L F++ RGKI+ RI+ K QR+L IKRAR + ++ Y
Sbjct: 14 CRFCANKNLPVDYKRPDILKDFVTDRGKIIARRITGTCAKCQRKLTLEIKRARQMAMLYY 73
Query: 81 V 81
Sbjct: 74 T 74
>gi|315446363|ref|YP_004079242.1| 30S ribosomal protein S18P [Mycobacterium sp. Spyr1]
gi|205562361|sp|A4T5Z8|RS182_MYCGI RecName: Full=30S ribosomal protein S18 2
gi|315264666|gb|ADU01408.1| SSU ribosomal protein S18P [Mycobacterium sp. Spyr1]
Length = 79
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
AP P RRN+ + G R+DYKD L +FLS+RGKI ++ ++ ++Q
Sbjct: 6 RAAPLPKKRRNM--------FAQLGIERVDYKDTSTLRQFLSERGKIRSRTVTGLTVQQQ 57
Query: 63 RELAKAIKRARYLGLIAY 80
R++ A+K AR + L+ Y
Sbjct: 58 RQVTIAVKNAREMALLPY 75
>gi|161784214|ref|YP_001595530.1| ribosomal protein S18 [Lemna minor]
gi|205831396|sp|A9L9B8|RR18_LEMMI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88696792|gb|ABD48517.1| ribosomal protein S18 [Lemna minor]
Length = 101
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFHKTKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|188528034|ref|YP_001910721.1| 30S ribosomal protein S18 [Helicobacter pylori Shi470]
gi|229559990|sp|B2UV09|RS18_HELPS RecName: Full=30S ribosomal protein S18
gi|188144274|gb|ACD48691.1| 30S ribosomal protein S18 [Helicobacter pylori Shi470]
Length = 85
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++ C + IDYKD+ +L LS+R KI+P R++ S K Q + AIKRA
Sbjct: 3 RKRYSKRYCKYTEAKISFIDYKDLDMLKHTLSERYKIMPRRLTGNSKKWQERVEVAIKRA 62
Query: 73 RYLGLIAYV 81
R++ LI Y+
Sbjct: 63 RHMALIPYI 71
>gi|166235855|gb|ABY85756.1| ribosomal protein S18 [Silene aegyptiaca]
Length = 101
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|166235679|gb|ABY85588.1| ribosomal protein S18 [Silene integripetala]
Length = 101
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|296936693|gb|ADH94365.1| ribosomal protein S18 [Syzygium cumini]
Length = 101
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|12044944|ref|NP_072754.1| 30S ribosomal protein S18 [Mycoplasma genitalium G37]
gi|1350949|sp|P47338|RS18_MYCGE RecName: Full=30S ribosomal protein S18
gi|3844679|gb|AAC71310.1| ribosomal protein S18 [Mycoplasma genitalium G37]
gi|166078670|gb|ABY79288.1| ribosomal protein S18 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 105
Score = 93.0 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ N +K C G RID+ D+ + RFLS KI P RI+ + QR +A A+
Sbjct: 32 KPNFKRAKKYCRFCAIGQLRIDFIDDLEAIKRFLSPYAKINPRRITGNCNMHQRHVANAL 91
Query: 70 KRARYLGLIAYV 81
KRARYL L+ ++
Sbjct: 92 KRARYLALVPFI 103
>gi|226968685|ref|YP_002808645.1| small subunit ribosomal protein S18 [Micromonas sp. RCC299]
gi|226431163|gb|ACO55569.1| small subunit ribosomal protein S18 [Micromonas sp. RCC299]
Length = 70
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+++ P++ I+YK++ LL RF++++GKI+P R++ V+ K+QR+LAKA+K+AR
Sbjct: 3 FSRQRTSPINA--GEIINYKNVDLLRRFITEQGKILPRRLTGVTAKQQRQLAKAVKQARI 60
Query: 75 LGLIAYV 81
LG + ++
Sbjct: 61 LGFLQFL 67
>gi|218175496|gb|ACK75696.1| Rps18 [Typha domingensis]
Length = 98
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFRKYKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|166235701|gb|ABY85609.1| ribosomal protein S18 [Silene conica]
Length = 98
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKQSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|255660112|ref|ZP_05405521.1| 30S ribosomal protein S18 [Mycoplasma genitalium G37]
Length = 104
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ N +K C G RID+ D+ + RFLS KI P RI+ + QR +A A+
Sbjct: 31 KPNFKRAKKYCRFCAIGQLRIDFIDDLEAIKRFLSPYAKINPRRITGNCNMHQRHVANAL 90
Query: 70 KRARYLGLIAYV 81
KRARYL L+ ++
Sbjct: 91 KRARYLALVPFI 102
>gi|28202194|ref|NP_777435.1| ribosomal protein S18 [Anthoceros formosae]
gi|41688681|sp|Q85BK3|RR18_ANTFO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|27807896|dbj|BAC55371.1| ribosomal protein S18 [Anthoceros formosae]
gi|27808035|dbj|BAC55467.1| ribosomal protein S18 [Anthoceros formosae]
Length = 75
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + IDYK+ LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKFKRSSRRRLPPI--RSGEIIDYKNTSLLRRFISEQGKILSRRMNKLTSKQQRLVTVA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARILALLPFLN 72
>gi|11465981|ref|NP_054523.1| ribosomal protein S18 [Nicotiana tabacum]
gi|28261739|ref|NP_783254.1| ribosomal protein S18 [Atropa belladonna]
gi|78102560|ref|YP_358701.1| ribosomal protein S18 [Nicotiana sylvestris]
gi|81301590|ref|YP_398887.1| ribosomal protein S18 [Nicotiana tomentosiformis]
gi|89280657|ref|YP_514874.1| ribosomal protein S18 [Solanum lycopersicum]
gi|91209010|ref|YP_538870.1| ribosomal protein S18 [Solanum bulbocastanum]
gi|108773152|ref|YP_635661.1| ribosomal protein S18 [Solanum tuberosum]
gi|62288969|sp|P69659|RR18_ATRBE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62288970|sp|P69660|RR18_TOBAC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122226851|sp|Q3C1K7|RR18_NICSY RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122233122|sp|Q33C10|RR18_NICTO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122245043|sp|Q2MIG5|RR18_SOLBU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122248444|sp|Q2MI78|RR18_SOLLC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|122248893|sp|Q2VEF6|RR18_SOLTU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|11851|emb|CAA77371.1| ribosomal protein S18 [Nicotiana tabacum]
gi|20068353|emb|CAC88066.1| ribosomal protein S18 [Atropa belladonna]
gi|77799587|dbj|BAE46676.1| ribosomal protein S18 [Nicotiana sylvestris]
gi|80750949|dbj|BAE48025.1| ribosomal protein S18 [Nicotiana tomentosiformis]
gi|82754648|gb|ABB90062.1| ribosomal protein S18 [Solanum tuberosum]
gi|84371917|gb|ABC56235.1| ribosomal protein S18 [Solanum bulbocastanum]
gi|84372005|gb|ABC56322.1| ribosomal protein S18 [Solanum lycopersicum]
gi|88656826|gb|ABD47079.1| ribosomal protein S18 [Solanum tuberosum]
gi|89241693|emb|CAJ32415.1| ribosomal protein S18 [Solanum lycopersicum]
gi|225220|prf||1211235BB ribosomal protein S18
Length = 101
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKFKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITLAIKQARILSLLPFLN 79
>gi|52220832|ref|YP_086988.1| ribosomal protein S18 [Panax ginseng]
gi|62287418|sp|Q68RY4|RR18_PANGI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|51235335|gb|AAT98531.1| ribosomal protein S18 [Panax ginseng]
Length = 101
Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|33519564|ref|NP_878396.1| 30S ribosomal protein S18 [Candidatus Blochmannia floridanus]
gi|59798862|sp|Q7VQN8|RS18_BLOFL RecName: Full=30S ribosomal protein S18
gi|33517227|emb|CAD83609.1| 30S ribosomal subunit protein S18 [Candidatus Blochmannia
floridanus]
Length = 78
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RK C + +DYKD+ + + + KI+PSRI+ K QR+LA+AIK A
Sbjct: 6 RYIRHRKFCRFTADKCIYVDYKDLSKIQHSIIENAKIIPSRITGTRSKYQRQLARAIKIA 65
Query: 73 RYLGLIAYVN 82
R+L L+ Y++
Sbjct: 66 RFLSLLPYID 75
>gi|23335650|ref|ZP_00120884.1| COG0238: Ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|23465012|ref|NP_695615.1| 30S ribosomal protein S18 [Bifidobacterium longum NCC2705]
gi|189440079|ref|YP_001955160.1| 30S ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|213691157|ref|YP_002321743.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227545708|ref|ZP_03975757.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239622618|ref|ZP_04665649.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|296453411|ref|YP_003660554.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133417|ref|YP_004000756.1| rpsr [Bifidobacterium longum subsp. longum BBMN68]
gi|317482747|ref|ZP_07941759.1| ribosomal protein S18 [Bifidobacterium sp. 12_1_47BFAA]
gi|322688391|ref|YP_004208125.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
157F]
gi|322690411|ref|YP_004219981.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|59798916|sp|Q8G758|RS18_BIFLO RecName: Full=30S ribosomal protein S18
gi|23325614|gb|AAN24251.1| 30S ribosomal protein S18-2 [Bifidobacterium longum NCC2705]
gi|189428514|gb|ACD98662.1| Ribosomal protein S18 [Bifidobacterium longum DJO10A]
gi|213522618|gb|ACJ51365.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227213824|gb|EEI81663.1| ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514615|gb|EEQ54482.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291517548|emb|CBK71164.1| SSU ribosomal protein S18P [Bifidobacterium longum subsp. longum
F8]
gi|296182842|gb|ADG99723.1| ribosomal protein S18 [Bifidobacterium longum subsp. longum
JDM301]
gi|311772646|gb|ADQ02134.1| RpsR [Bifidobacterium longum subsp. longum BBMN68]
gi|316915782|gb|EFV37192.1| ribosomal protein S18 [Bifidobacterium sp. 12_1_47BFAA]
gi|320455267|dbj|BAJ65889.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320457215|dbj|BAJ67836.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320459727|dbj|BAJ70347.1| 30S ribosomal protein S18 [Bifidobacterium longum subsp. infantis
157F]
Length = 82
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 22 AAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|166235877|gb|ABY85777.1| ribosomal protein S18 [Silene atocioides]
Length = 101
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|108802664|ref|YP_636320.1| ribosomal protein S18 [Eucalyptus globulus subsp. globulus]
gi|309322468|ref|YP_003933981.1| ribosomal protein S18 [Eucalyptus grandis]
gi|122227187|sp|Q49KX7|RR18_EUCGG RecName: Full=30S ribosomal protein S18, chloroplastic
gi|60460830|gb|AAX21050.1| ribosomal protein S18 [Eucalyptus globulus subsp. globulus]
gi|308223302|gb|ADO23610.1| ribosomal protein S18 [Eucalyptus grandis]
Length = 101
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|11466725|ref|NP_039321.1| ribosomal protein S18 [Marchantia polymorpha]
gi|133838|sp|P06375|RR18_MARPO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|11695|emb|CAA28107.1| rps18 [Marchantia polymorpha]
Length = 75
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR L A
Sbjct: 1 MNKSKRSSRRRMPPI--RSGEIIDYKNISLLRRFVSEQGKILSRRMNRLTSKQQRLLTIA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARVLALLPFLN 72
>gi|148654767|ref|YP_001274972.1| 30S ribosomal protein S18 [Roseiflexus sp. RS-1]
gi|205556483|sp|A5UQW9|RS181_ROSS1 RecName: Full=30S ribosomal protein S18 1
gi|148566877|gb|ABQ89022.1| SSU ribosomal protein S18P [Roseiflexus sp. RS-1]
Length = 88
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K C S G DYKD L RFL GKI+P R + +S K QR+L AIKRAR++ L
Sbjct: 17 KKVCEFSRLGILP-DYKDPERLKRFLGPTGKILPRRRTGLSAKMQRKLTIAIKRARHMAL 75
Query: 78 IAYVN 82
+ +V
Sbjct: 76 LPFVE 80
>gi|224282369|ref|ZP_03645691.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
gi|310286813|ref|YP_003938071.1| ribosomal protein S18 [Bifidobacterium bifidum S17]
gi|311063711|ref|YP_003970436.1| 30S ribosomal protein S18P RpsR [Bifidobacterium bifidum PRL2010]
gi|313139513|ref|ZP_07801706.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
gi|309250749|gb|ADO52497.1| ribosomal protein S18 [Bifidobacterium bifidum S17]
gi|310866030|gb|ADP35399.1| RpsR SSU ribosomal protein S18P [Bifidobacterium bifidum PRL2010]
gi|313132023|gb|EFR49640.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171]
Length = 82
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 22 AAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|254798679|ref|YP_003058300.1| ribosomal protein S18 [Parachlorella kessleri]
gi|229915627|gb|ACQ90970.1| ribosomal protein S18 [Parachlorella kessleri]
Length = 105
Score = 92.6 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
DYK+ +LL +F+S +GKI+P R + ++ K+QR +A AIKRAR GL+ +VNL
Sbjct: 46 DYKNTKLLVKFISPQGKILPRRATGLTAKQQRSMANAIKRARMSGLLPFVNL 97
>gi|166235657|gb|ABY85567.1| ribosomal protein S18 [Silene sorensenis]
Length = 101
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|166235547|gb|ABY85462.1| ribosomal protein S18 [Lychnis chalcedonica]
Length = 82
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|291455937|ref|ZP_06595327.1| ribosomal protein S18 [Bifidobacterium breve DSM 20213]
gi|291382346|gb|EFE89864.1| ribosomal protein S18 [Bifidobacterium breve DSM 20213]
Length = 82
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QREL+KAIK AR + L+ Y
Sbjct: 22 AAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRELSKAIKNAREMALLPYAT 79
>gi|166235569|gb|ABY85483.1| ribosomal protein S18 [Silene samia]
gi|166235613|gb|ABY85525.1| ribosomal protein S18 [Silene uniflora]
gi|166235635|gb|ABY85546.1| ribosomal protein S18 [Silene zawadskii]
gi|166235723|gb|ABY85630.1| ribosomal protein S18 [Silene latifolia]
gi|166235767|gb|ABY85672.1| ribosomal protein S18 [Silene sordida]
gi|166235811|gb|ABY85714.1| ribosomal protein S18 [Silene pseudoatocion]
Length = 101
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|153803832|ref|ZP_01958418.1| ribosomal protein S18 [Vibrio cholerae MZO-3]
gi|124120630|gb|EAY39373.1| ribosomal protein S18 [Vibrio cholerae MZO-3]
Length = 64
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
+ +G IDYKD+ L ++++ GKIVPSRI+ S K QR+LA+AIKRARY
Sbjct: 14 TAEGVQEIDYKDVATLKNYITEAGKIVPSRITGTSAKYQRQLARAIKRARY 64
>gi|90994447|ref|YP_536937.1| ribosomal protein S18 [Porphyra yezoensis]
gi|122238242|sp|Q1XDN1|RR18_PORYE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|90819011|dbj|BAE92380.1| 30S ribosomal protein S18 [Porphyra yezoensis]
Length = 70
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+R + P+ +DYKDI LL +F++++GKI+P R + ++ K+Q++L KAIK+AR L
Sbjct: 4 YRNRISPIK--PTDAVDYKDIDLLRKFITEQGKILPKRSTGLTSKQQKKLTKAIKQARIL 61
Query: 76 GLIAYVN 82
L+ ++N
Sbjct: 62 SLLPFLN 68
>gi|146216940|ref|NP_904178.2| ribosomal protein S18 [Physcomitrella patens subsp. patens]
Length = 75
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKSKRSSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARVLALLPFLN 72
>gi|261338591|ref|ZP_05966475.1| ribosomal protein S18 [Bifidobacterium gallicum DSM 20093]
gi|270276626|gb|EFA22480.1| ribosomal protein S18 [Bifidobacterium gallicum DSM 20093]
Length = 82
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++A AIK AR + L+ Y
Sbjct: 22 AAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPYAT 79
>gi|13507969|ref|NP_109918.1| 30S ribosomal protein S18 [Mycoplasma pneumoniae M129]
gi|2500476|sp|P75541|RS18_MYCPN RecName: Full=30S ribosomal protein S18
gi|1674303|gb|AAB96249.1| ribosomal protein S18 [Mycoplasma pneumoniae M129]
Length = 104
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
++R +K C G RID D+ L RFLS KI P RI+ QR +AK
Sbjct: 29 MVRPLFKRSKKYCRFCAIGQLRIDLIDDLEALKRFLSPYAKINPRRITGNCQMHQRHVAK 88
Query: 68 AIKRARYLGLIAYV 81
A+KRARYL L+ +V
Sbjct: 89 ALKRARYLALVPFV 102
>gi|166239996|gb|ABY86523.1| ribosomal protein S18 [Heliosperma alpestre]
Length = 101
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|290487242|gb|ADD30005.1| ribosomal protein S18 [Ilex cornuta]
Length = 101
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFFKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITTAIKQARILSSLPFLN 79
>gi|301633588|gb|ADK87142.1| ribosomal protein S18 [Mycoplasma pneumoniae FH]
Length = 103
Score = 92.2 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
++R +K C G RID D+ L RFLS KI P RI+ QR +AK
Sbjct: 28 MVRPLFKRSKKYCRFCAIGQLRIDLIDDLEALKRFLSPYAKINPRRITGNCQMHQRHVAK 87
Query: 68 AIKRARYLGLIAYV 81
A+KRARYL L+ +V
Sbjct: 88 ALKRARYLALVPFV 101
>gi|320333138|ref|YP_004169849.1| 30S ribosomal protein S18 [Deinococcus maricopensis DSM 21211]
gi|319754427|gb|ADV66184.1| 30S ribosomal protein S18 [Deinococcus maricopensis DSM 21211]
Length = 88
Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MAEVAPTPLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
MA P + R+ K P + DYKD+++L RF+S GKI+P R + +S
Sbjct: 1 MATTERKPRAKGPKRPRKPKVDPFAIGELEITDYKDVKMLRRFISDTGKILPRRRTGLSA 60
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
K QR +A+ IK AR L L+ Y
Sbjct: 61 KNQRRIAQTIKIARQLALLPYTE 83
>gi|119026499|ref|YP_910344.1| 30S ribosomal protein S18 [Bifidobacterium adolescentis ATCC
15703]
gi|154488158|ref|ZP_02029275.1| hypothetical protein BIFADO_01730 [Bifidobacterium adolescentis
L2-32]
gi|166220925|sp|A1A3H9|RS18_BIFAA RecName: Full=30S ribosomal protein S18
gi|118766083|dbj|BAF40262.1| 30S ribosomal protein S18 [Bifidobacterium adolescentis ATCC
15703]
gi|154083631|gb|EDN82676.1| hypothetical protein BIFADO_01730 [Bifidobacterium adolescentis
L2-32]
Length = 82
Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QRE++KAIK AR + L+ Y
Sbjct: 22 AAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPYAT 79
>gi|30352055|ref|NP_848082.1| ribosomal protein S18 [Adiantum capillus-veneris]
gi|62287465|sp|Q85FK0|RR18_ADICA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30266734|gb|AAP29413.1| ribosomal protein S18 [Adiantum capillus-veneris]
Length = 75
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ LL RF+S++GKI+ R++ ++ K+QR +A AIKRAR L L+ + N
Sbjct: 19 ETIDYKNTSLLRRFVSEQGKILSRRMNRLTSKQQRLIATAIKRARILALLPFSN 72
>gi|149390562|ref|YP_001294206.1| ribosomal protein S18 [Buxus microphylla]
gi|205831418|sp|A6MM58|RR18_BUXMI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|146762307|gb|ABQ45271.1| ribosomal protein S18 [Buxus microphylla]
Length = 103
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|183602723|ref|ZP_02964086.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683176|ref|YP_002469559.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191511|ref|YP_002968905.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196916|ref|YP_002970471.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183217961|gb|EDT88609.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620826|gb|ACL28983.1| ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249903|gb|ACS46843.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251470|gb|ACS48409.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289177636|gb|ADC84882.1| SSU ribosomal protein S18P [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295794503|gb|ADG34038.1| 30S ribosomal protein S18 [Bifidobacterium animalis subsp. lactis
V9]
Length = 82
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++A AIK AR + L+ Y
Sbjct: 22 AAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKIATAIKNAREMALLPYAT 79
>gi|166235833|gb|ABY85735.1| ribosomal protein S18 [Silene schafta]
Length = 101
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKPKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|289065111|ref|YP_003433997.1| ribosomal protein S18 [Typha latifolia]
gi|69216273|gb|AAZ03917.1| ribosomal protein S18 [Typha latifolia]
gi|281371794|gb|ADA63721.1| ribosomal protein S18 [Typha latifolia]
Length = 101
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFRKYKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|292559530|ref|YP_003540953.1| 30S ribosomal protein S18 [Phoenix dactylifera]
gi|156598178|gb|ABU85353.1| ribosomal protein S18 [Elaeis oleifera]
gi|290790938|gb|ADD63193.1| 30S ribosomal protein S18 [Phoenix dactylifera]
gi|294620599|gb|ADF28168.1| 30S ribosomal protein S18 [Phoenix dactylifera]
Length = 101
Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFRKYKRSFRRRLSPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNKLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|310818662|ref|YP_003951020.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
gi|309391734|gb|ADO69193.1| 30S ribosomal protein S18 [Stigmatella aurantiaca DW4/3-1]
Length = 69
Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK PL +D+KD++LL F+++RG+++P R++ V+ ++QR++AKA+KRAR LG
Sbjct: 3 RRKPNPL--GNVRTLDFKDVQLLKYFVTERGRLIPRRLTGVTAQQQRQIAKAVKRARLLG 60
Query: 77 LIAYV 81
L+ ++
Sbjct: 61 LLPFL 65
>gi|325003294|ref|ZP_08124406.1| 30S ribosomal protein S18 [Pseudonocardia sp. P1]
Length = 80
Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RRK+ PL +G +D+KD LL F+S RGKI R++ ++ ++QR++A AI+ AR +
Sbjct: 12 RRKANPLKVRGIEHVDWKDAALLRTFISDRGKIRARRVTGLTGRQQRQVALAIRNAREMA 71
Query: 77 LIAY 80
L+ Y
Sbjct: 72 LLPY 75
>gi|313184015|ref|YP_004021172.1| ribosomal protein S18 [Castanea mollissima]
gi|309321542|gb|ADO65082.1| ribosomal protein S18 [Castanea mollissima]
Length = 119
Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLYFKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLNLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|289547949|ref|YP_003472937.1| ribosomal protein S18 [Thermocrinis albus DSM 14484]
gi|289181566|gb|ADC88810.1| ribosomal protein S18 [Thermocrinis albus DSM 14484]
Length = 71
Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
V +K C + YK+ + L +FLS+RGKI+ R +++ K QR LA+ IKRA
Sbjct: 2 EVKKSKKVCYFCDQKKDP-SYKNYQELAQFLSERGKIIGRRQNNLCAKHQRILAREIKRA 60
Query: 73 RYLGLIAYVNL 83
R L L+ YV +
Sbjct: 61 RQLALLPYVVM 71
>gi|301113826|ref|XP_002998683.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111984|gb|EEY70036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 314
Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
D+ LL F+S G+I P R + ++ K+QR+LA+AIK +R + L+ Y++
Sbjct: 221 DVDLLRLFISPTGRIRPRRFTGLTAKQQRKLAQAIKISRQMALLPYLS 268
>gi|226968550|ref|YP_002808503.1| small subunit ribosomal protein S18 [Micromonas pusilla CCMP1545]
gi|226348845|gb|ACO50748.1| small subunit ribosomal protein S18 [Micromonas pusilla CCMP1545]
Length = 70
Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+++ P+ I+YK++ LL RF++++GKI+P R++ V+ K+QR+LA+A+K+AR LG
Sbjct: 5 RQRTSPI--NEGEIINYKNVDLLRRFITEQGKILPRRLTGVTAKQQRQLARAVKQARILG 62
Query: 77 LIAYV 81
+ ++
Sbjct: 63 FLQFL 67
>gi|108796846|ref|YP_636439.1| ribosomal protein S18 [Staurastrum punctulatum]
gi|122245549|sp|Q32RT7|RR18_STAPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|61393614|gb|AAX45755.1| ribosomal protein S18 [Staurastrum punctulatum]
Length = 80
Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K IDYK++ LL +F+S++GKI+ RI+ ++ K+QR + KAIK AR L L+ ++N
Sbjct: 21 KPGENIDYKNVGLLRKFISEQGKILSKRITRLTSKQQRAMTKAIKSARILALLPFIN 77
>gi|78777859|ref|YP_394174.1| 30S ribosomal protein S18 [Sulfurimonas denitrificans DSM 1251]
gi|123741081|sp|Q30PZ2|RS18_SULDN RecName: Full=30S ribosomal protein S18
gi|78498399|gb|ABB44939.1| SSU ribosomal protein S18P [Sulfurimonas denitrificans DSM 1251]
Length = 87
Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ ++++ C +DYKD+ L LS+R KI+P R++ + Q +A I
Sbjct: 1 MAERRKYKKRYCKYCEAKVDFMDYKDVGALRFSLSERYKIMPRRLTGNCKRHQDMIATVI 60
Query: 70 KRARYLGLIAYV 81
KRAR L+ Y
Sbjct: 61 KRARAAALVPYT 72
>gi|227496647|ref|ZP_03926923.1| ribosomal protein S18 [Actinomyces urogenitalis DSM 15434]
gi|226833842|gb|EEH66225.1| ribosomal protein S18 [Actinomyces urogenitalis DSM 15434]
Length = 78
Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P LR+ ++K P+ IDYKD L +F+S RGKI R++ VS ++QR++A
Sbjct: 3 KPQLRKP---KKKIGPVKAIKVGTIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRKIA 59
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 60 KAVKNAREMALLPYSS 75
>gi|290487258|gb|ADD30013.1| ribosomal protein S18 [Berberidopsis corallina]
Length = 101
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFFKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|91204547|emb|CAJ70775.1| strongly similar to 30S ribosomal subunit protein S18 [Candidatus
Kuenenia stuttgartiensis]
Length = 73
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ R + ++ C G +DYKDI+ L + + RGK+ + S + QR + +I
Sbjct: 1 MTRKIFNKTSKCRFCRMGVEEVDYKDIQNLQKLATTRGKLFSRKRSGNCARHQRSVKMSI 60
Query: 70 KRARYLGLIAYVN 82
KRAR++ L+ YV
Sbjct: 61 KRARFMALLPYVT 73
>gi|290487262|gb|ADD30015.1| ribosomal protein S18 [Cornus florida]
Length = 101
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|81176272|ref|YP_398351.1| ribosomal protein S18 [Lactuca sativa]
gi|122248966|sp|Q332V6|RR18_LACSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|78675190|dbj|BAE47616.1| chloroplast 30S ribosomal protein S18 [Lactuca sativa]
gi|88657005|gb|ABD47255.1| ribosomal protein S18 [Lactuca sativa]
Length = 101
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRTFLKSKRSFRRRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|62287445|sp|Q6YXM4|RR18_PHYPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|34494761|dbj|BAC85028.1| ribosomal protein S18 [Physcomitrella patens subsp. patens]
Length = 79
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ S RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + AIK
Sbjct: 7 KSKRSSRRRLPPI--RSGEIIDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIAIK 64
Query: 71 RARYLGLIAYVN 82
RAR L L+ ++N
Sbjct: 65 RARVLALLPFLN 76
>gi|15605661|ref|NP_213036.1| ribosomal protein S18 [Aquifex aeolicus VF5]
gi|7388147|sp|O66476|RS18_AQUAE RecName: Full=30S ribosomal protein S18
gi|2982823|gb|AAC06446.1| ribosomal protein S18 [Aquifex aeolicus VF5]
Length = 72
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
+ ++K C + DYK+ L FL++RG+I + + + K QR LA IKRAR
Sbjct: 4 RAPKKKVCMYCEQKREP-DYKNYEELRNFLTERGRIKDRKQTGLCAKHQRRLAVQIKRAR 62
Query: 74 YLGLIAYV 81
LGL+ YV
Sbjct: 63 QLGLLPYV 70
>gi|229817075|ref|ZP_04447357.1| hypothetical protein BIFANG_02330 [Bifidobacterium angulatum DSM
20098]
gi|229784864|gb|EEP20978.1| hypothetical protein BIFANG_02330 [Bifidobacterium angulatum DSM
20098]
Length = 82
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QRE++KAIK AR + L+ Y
Sbjct: 23 AKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQREISKAIKNAREMALLPYAT 79
>gi|94502513|ref|YP_588139.1| ribosomal protein S18 [Helianthus annuus]
gi|183217763|ref|YP_001837382.1| ribosomal protein S18 [Guizotia abyssinica]
gi|281190743|ref|YP_003330980.1| ribosomal protein S18 [Parthenium argentatum]
gi|122244029|sp|Q1KXT7|RR18_HELAN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831392|sp|B2LML5|RR18_GUIAB RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88656917|gb|ABD47168.1| ribosomal protein S18 [Helianthus annuus]
gi|179366278|gb|ACB86549.1| ribosomal protein S18 [Guizotia abyssinica]
gi|269924856|gb|ACZ52729.1| ribosomal protein S18 [Parthenium argentatum]
Length = 101
Score = 91.1 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S R++ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRTFLKSKRSFRKRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|326200302|gb|ADZ52341.1| ribosomal protein S18 [Asclepias syriaca]
Length = 102
Score = 90.7 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY++I L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPPLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ + N
Sbjct: 60 RLITIAIKQARILSLLPFRN 79
>gi|113170433|ref|YP_717225.1| Rps18 [Ostreococcus tauri]
gi|122228947|sp|Q0P3N0|RR18_OSTTA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112806840|emb|CAL36347.1| Rps18 [Ostreococcus tauri]
Length = 70
Score = 90.7 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
R+++ P+ I YK++ LL RF++++GKI+P R++ V+ K+QR+LAKAIK+AR
Sbjct: 3 FTRQRTSPIHA--GEIISYKNVDLLRRFITEQGKILPRRLTGVTAKEQRQLAKAIKQARI 60
Query: 75 LGLIAYV 81
LG + ++
Sbjct: 61 LGFLQFL 67
>gi|290487282|gb|ADD30025.1| ribosomal protein S18 [Trochodendron aralioides]
Length = 100
Score = 90.7 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|91984014|ref|YP_567098.1| ribosomal protein S18 [Vitis vinifera]
gi|224365660|ref|YP_002608387.1| ribosomal protein S18 [Vitis vinifera]
gi|122230337|sp|Q0ZIZ8|RR18_VITVI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|91701672|gb|ABE47556.1| ribosomal protein S18 [Vitis vinifera]
gi|209954184|emb|CAQ77640.1| ribosomal protein S18 [Vitis vinifera]
gi|239764736|gb|ACS15207.1| ribosomal protein S18 [Vitis vinifera]
Length = 101
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|290487238|gb|ADD30003.1| ribosomal protein S18 [Dillenia indica]
Length = 101
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RFITIAIKQARILSSLPFLN 79
>gi|330850652|ref|YP_004376533.1| ribosomal protein S18 [Ptilidium pulcherrimum]
gi|302024781|gb|ADK89627.1| ribosomal protein S18 [Ptilidium pulcherrimum]
Length = 75
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S R++ + + IDYK++ LL RF+S++GKI+ R + ++ K+QR L A
Sbjct: 1 MTKSRRSSRKRIPAI--RSGELIDYKNVSLLRRFISEQGKILSRRTNRLTSKQQRLLTLA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ + N
Sbjct: 59 IKRARVLALLPFTN 72
>gi|290487272|gb|ADD30020.1| ribosomal protein S18 [Liquidambar styraciflua]
Length = 101
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|323148926|ref|YP_004222481.1| ribosomal protein S18 [Smilax china]
gi|308742617|gb|ADO33468.1| ribosomal protein S18 [Smilax china]
Length = 101
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + +S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFRKSKLSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|193237750|dbj|BAG50147.1| ribosomal protein S18 [Takakia lepidozioides]
gi|193237760|dbj|BAG50154.1| ribosomal protein S18 [Takakia lepidozioides]
Length = 75
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + +DYK+I LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKSKRSSRRRLPPI--RSGDILDYKNINLLRRFISEQGKILSRRMNRLTSKQQRLMTIA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARVLALLPFLN 72
>gi|290487248|gb|ADD30008.1| ribosomal protein S18 [Nelumbo nucifera]
Length = 101
Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|139389972|ref|YP_001123572.1| ribosomal protein S18 [Draba nemorosa]
gi|205831390|sp|A4QL41|RR18_DRANE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286774|dbj|BAF50396.1| ribosomal protein S18 [Draba nemorosa]
gi|262400742|gb|ACY66231.1| ribosomal protein S18 [Brassica napus]
Length = 101
Score = 90.7 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+Q
Sbjct: 2 NKSKRPFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|119368521|ref|YP_913209.1| ribosomal protein S18 [Gossypium barbadense]
gi|125987695|sp|A0ZZ57|RR18_GOSBA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|119224883|dbj|BAF41269.1| Ribosomal protein S18 [Gossypium barbadense]
Length = 101
Score = 90.7 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|290487268|gb|ADD30018.1| ribosomal protein S18 [Gunnera manicata]
Length = 101
Score = 90.3 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|171742016|ref|ZP_02917823.1| hypothetical protein BIFDEN_01119 [Bifidobacterium dentium ATCC
27678]
gi|283456850|ref|YP_003361414.1| 30S ribosomal protein S18 [Bifidobacterium dentium Bd1]
gi|306824380|ref|ZP_07457749.1| 30S ribosomal protein S18 [Bifidobacterium dentium ATCC 27679]
gi|309802045|ref|ZP_07696158.1| ribosomal protein S18 [Bifidobacterium dentium JCVIHMP022]
gi|171277630|gb|EDT45291.1| hypothetical protein BIFDEN_01119 [Bifidobacterium dentium ATCC
27678]
gi|283103484|gb|ADB10590.1| 30S ribosomal protein S18 [Bifidobacterium dentium Bd1]
gi|304552411|gb|EFM40329.1| 30S ribosomal protein S18 [Bifidobacterium dentium ATCC 27679]
gi|308221380|gb|EFO77679.1| ribosomal protein S18 [Bifidobacterium dentium JCVIHMP022]
Length = 82
Score = 90.3 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR+++KAIK AR + L+ Y
Sbjct: 22 AAKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRKISKAIKNAREMALLPYAT 79
>gi|139389664|ref|YP_001123221.1| ribosomal protein S18 [Arabis hirsuta]
gi|205831416|sp|A4QK40|RR18_ARAHI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286419|dbj|BAF50045.1| ribosomal protein S18 [Arabis hirsuta]
Length = 101
Score = 90.3 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+Q
Sbjct: 2 NKSKRPFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITMAIKQARILSLLPFLN 79
>gi|116617130|ref|YP_817504.1| ribosomal protein S18 [Coffea arabica]
gi|122153642|sp|A0A357|RR18_COFAR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|116242186|gb|ABJ89701.1| ribosomal protein S18 [Coffea arabica]
Length = 101
Score = 90.3 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRSFLKSKRSVRRRLPPI--QSGDLIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITVAIKQARILSLLPFLN 79
>gi|323358005|ref|YP_004224401.1| ribosomal protein S18 [Microbacterium testaceum StLB037]
gi|323274376|dbj|BAJ74521.1| ribosomal protein S18 [Microbacterium testaceum StLB037]
Length = 84
Score = 90.3 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R+ + + P IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+AIK
Sbjct: 10 RKPRKGAKNAAPAKAIRVGVIDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAIK 69
Query: 71 RARYLGLIAY 80
AR + L+ Y
Sbjct: 70 NAREMALLPY 79
>gi|41409865|ref|NP_962701.1| 30S ribosomal protein S18 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|59798950|sp|Q73TF1|RS182_MYCPA RecName: Full=30S ribosomal protein S18 2
gi|41398697|gb|AAS06317.1| RpsR2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 88
Score = 90.3 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P PL R RK L G +DYKD L F+S+RGKI +++ +S ++QR++
Sbjct: 11 PAPLAGRA----RKKNLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQQQRQV 66
Query: 66 AKAIKRARYLGLIAY 80
A AIK AR + L+ Y
Sbjct: 67 ATAIKNAREMALLPY 81
>gi|224373383|ref|YP_002607755.1| 30S ribosomal protein S18 [Nautilia profundicola AmH]
gi|223588945|gb|ACM92681.1| ribosomal protein S18 [Nautilia profundicola AmH]
Length = 94
Score = 90.3 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKD+ L+ LS+R KI+P R++ K Q + KAIKRAR + LI YV
Sbjct: 16 YCEMKVDFIGYKDLDLIKYSLSERYKIMPRRLTGTCKKHQDMVTKAIKRARQVALIPYV 74
>gi|301353401|ref|YP_003795602.1| ribosomal protein S18 [Pteridium aquilinum subsp. aquilinum]
gi|301016319|gb|ADK47606.1| ribosomal protein S18 [Pteridium aquilinum subsp. aquilinum]
Length = 75
Score = 90.3 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ LL RF+S++G+I+ R++ ++ K+QR +A AIKRAR L L+ + N
Sbjct: 19 ETIDYKNTSLLRRFVSEQGRILSRRMNRLTSKQQRSVATAIKRARILALLPFSN 72
>gi|166235745|gb|ABY85651.1| ribosomal protein S18 [Silene cryptoneura]
Length = 101
Score = 90.3 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ + + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPSI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|308746053|ref|YP_003934580.1| ribosomal protein S18 [Cheilanthes lindheimeri]
gi|302375486|gb|ADL29860.1| ribosomal protein S18 [Cheilanthes lindheimeri]
Length = 75
Score = 90.3 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK+ LL RFLS++GKI+ R++ ++ K+QR +A A+KRAR L L+ + N
Sbjct: 19 EIVDYKNTSLLRRFLSEQGKILSRRMNRLTSKQQRLVATAVKRARILALLPFSN 72
>gi|290487266|gb|ADD30017.1| ribosomal protein S18 [Ficus sp. Moore 315]
Length = 101
Score = 90.3 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|118468979|ref|YP_890287.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
gi|205556395|sp|A0R549|RS181_MYCS2 RecName: Full=30S ribosomal protein S18 1
gi|118170266|gb|ABK71162.1| ribosomal protein S18 [Mycobacterium smegmatis str. MC2 155]
Length = 85
Score = 90.3 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
+ + L G IDYKD+ +L FLS+RGKI ++ ++ ++QR++A AIK AR +
Sbjct: 17 KKPRRNQLEALGVTTIDYKDVAVLRTFLSERGKIRSRHVTGLTPQQQRQVATAIKNAREM 76
Query: 76 GLIA 79
L+
Sbjct: 77 ALLP 80
>gi|297561295|ref|YP_003680269.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845743|gb|ADH67763.1| ribosomal protein S18 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 85
Score = 89.9 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
IDYKD LL +F+S++GKI R++ V+ ++QR +A A+K AR + L+ Y
Sbjct: 25 DYIDYKDTALLRKFISEKGKIRSRRVTRVTARQQRLIAAAVKNAREMALLPY 76
>gi|309791184|ref|ZP_07685716.1| ribosomal protein S18 [Oscillochloris trichoides DG6]
gi|308226746|gb|EFO80442.1| ribosomal protein S18 [Oscillochloris trichoides DG6]
Length = 90
Score = 89.9 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ C + G DYKDI+ L ++++ +GKI+P R + V+ K QR L+ AIKRAR+L
Sbjct: 21 RRRECEFTKLGILP-DYKDIKRLQKYVTAQGKILPRRRTGVTAKMQRRLSIAIKRARHLA 79
Query: 77 LIA 79
L+
Sbjct: 80 LLP 82
>gi|297627497|ref|YP_003689260.1| 30S ribosomal protein S18 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923262|emb|CBL57859.1| 30S ribosomal protein S18 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 79
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD LL RF+S+RGKI R++ +S + Q ++A AIK AR L L+ Y
Sbjct: 21 HVDHVDYKDTTLLRRFISERGKIRARRVTGLSVQDQSKVAMAIKNARELALLPYTT 76
>gi|156743828|ref|YP_001433957.1| 30S ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
gi|205556668|sp|A7NQU3|RS182_ROSCS RecName: Full=30S ribosomal protein S18 2
gi|156235156|gb|ABU59939.1| ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
Length = 88
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K C S G DYKD L RFL GKI+P R + ++ K QR L AIKRAR++ L+
Sbjct: 18 KVCEFSRLGILP-DYKDPERLRRFLGPTGKILPRRRTGLTAKMQRRLTIAIKRARHMALL 76
Query: 79 AYVN 82
+V
Sbjct: 77 PFVE 80
>gi|290487256|gb|ADD30012.1| ribosomal protein S18 [Ximenia americana]
Length = 104
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|124302928|ref|YP_001023723.1| ribosomal protein S18 [Angiopteris evecta]
gi|205831415|sp|A2T355|RR18_ANGEV RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110628326|gb|ABG79622.1| ribosomal protein S18 [Angiopteris evecta]
Length = 75
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R S RR+ P+ + IDYK+I LL RF+S++GKI+ RI+ ++ K+QR + A
Sbjct: 1 MNRTKRSSRRRLPPI--RSGEIIDYKNISLLRRFMSEQGKILSRRINRLTSKQQRLMTVA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L ++N
Sbjct: 59 IKRARILALSPFLN 72
>gi|283782810|ref|YP_003373564.1| ribosomal protein S18 [Gardnerella vaginalis 409-05]
gi|297242912|ref|ZP_06926850.1| ribosomal protein S18 [Gardnerella vaginalis AMD]
gi|298253290|ref|ZP_06977082.1| ribosomal protein S18 [Gardnerella vaginalis 5-1]
gi|308235864|ref|ZP_07666601.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14018]
gi|311115041|ref|YP_003986262.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14019]
gi|283441410|gb|ADB13876.1| ribosomal protein S18 [Gardnerella vaginalis 409-05]
gi|296889123|gb|EFH27857.1| ribosomal protein S18 [Gardnerella vaginalis AMD]
gi|297532685|gb|EFH71571.1| ribosomal protein S18 [Gardnerella vaginalis 5-1]
gi|310946535|gb|ADP39239.1| 30S ribosomal protein S18 [Gardnerella vaginalis ATCC 14019]
Length = 82
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR++AKA+K AR + L+ Y
Sbjct: 22 AAKITEIDYKDVALLRKFVSDRGKIRSRRITGVTVQEQRKIAKAVKNAREMALLPYAT 79
>gi|307718999|ref|YP_003874531.1| 30S ribosomal protein S18 [Spirochaeta thermophila DSM 6192]
gi|306532724|gb|ADN02258.1| 30S ribosomal protein S18 [Spirochaeta thermophila DSM 6192]
Length = 102
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR R+K ++ IDYK +L +FL++ GKI+P RI+ S K QR L
Sbjct: 29 PQDQPRRPYF-RKKVDKIALYKLE-IDYKKPEVLRQFLTENGKILPRRITGTSAKNQRRL 86
Query: 66 AKAIKRARYLGLIA 79
+ IK+AR L L+
Sbjct: 87 VREIKKARILALLP 100
>gi|254818912|ref|ZP_05223913.1| 30S ribosomal protein S18 [Mycobacterium intracellulare ATCC
13950]
Length = 87
Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 10 LRRNVSHRR---------KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+ R V+ RR K L G +DYKD L F+S+RGKI +++ +S +
Sbjct: 1 MARKVARRRATAPAGRSPKRNLLDSLGLRTVDYKDTATLRVFISERGKIRSRQVTGLSVQ 60
Query: 61 KQRELAKAIKRARYLGLIAY 80
+QR++A AIK AR + L+ Y
Sbjct: 61 QQRQVAAAIKNAREMALLPY 80
>gi|294787280|ref|ZP_06752533.1| ribosomal protein S18 [Parascardovia denticolens F0305]
gi|315227162|ref|ZP_07868949.1| 30S ribosomal protein S18 [Parascardovia denticolens DSM 10105]
gi|294484636|gb|EFG32271.1| ribosomal protein S18 [Parascardovia denticolens F0305]
gi|315119612|gb|EFT82745.1| 30S ribosomal protein S18 [Parascardovia denticolens DSM 10105]
Length = 91
Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ VS ++QR++A+AIK AR + L+ Y
Sbjct: 23 AKVTEIDYKDVALLRKFISDRGKIRSRRITGVSVQEQRKIARAIKNAREMALLPYST 79
>gi|139390174|ref|YP_001123747.1| ribosomal protein S18 [Lobularia maritima]
gi|205831399|sp|A4QLL6|RR18_LOBMA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286951|dbj|BAF50571.1| ribosomal protein S18 [Lobularia maritima]
Length = 101
Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+Q
Sbjct: 2 NKSKRPFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++
Sbjct: 60 RLITIAIKQARILSLLPFLT 79
>gi|122894012|ref|YP_001004208.1| ribosomal protein S18 [Ranunculus macranthus]
gi|69216271|gb|AAZ03916.1| ribosomal protein S18 [Ranunculus macranthus]
gi|85540826|gb|ABC70778.1| ribosomal protein S18 [Ranunculus macranthus]
Length = 101
Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + ++ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFIKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITVAIKQARILSLLPFLN 79
>gi|118619879|ref|YP_908211.1| 30S ribosomal protein S18 [Mycobacterium ulcerans Agy99]
gi|183980320|ref|YP_001848611.1| ribosomal protein S18 RpsR2 [Mycobacterium marinum M]
gi|205556568|sp|B2HKQ1|RS182_MYCMM RecName: Full=30S ribosomal protein S18 2
gi|205556605|sp|A0PWM1|RS182_MYCUA RecName: Full=30S ribosomal protein S18 2
gi|118571989|gb|ABL06740.1| ribosomal protein S18 RpsR2 [Mycobacterium ulcerans Agy99]
gi|183173646|gb|ACC38756.1| ribosomal protein S18 RpsR2 [Mycobacterium marinum M]
Length = 87
Score = 89.6 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 9 LLRRNVSHRR---------KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ ++ RR K L G +DYKDI L F+S RGKI R++ ++
Sbjct: 1 MKKKPRRTRRPIAAPATPAKKNLLDSLGVSEVDYKDISRLRTFISDRGKIRSRRVTGLTV 60
Query: 60 KKQRELAKAIKRARYLGLIAY 80
++QR++A AIK AR + L+ Y
Sbjct: 61 QQQRQIATAIKNAREMALLPY 81
>gi|317046195|ref|YP_004072484.1| ribosomal protein S18 [Corynocarpus laevigata]
gi|309252912|gb|ADO60332.1| ribosomal protein S18 [Corynocarpus laevigata]
Length = 101
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|68164825|ref|YP_247621.1| ribosomal protein S18 [Cucumis sativus]
gi|75317284|sp|Q4VZJ5|RR18_CUCSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|67511420|emb|CAJ00780.1| ribosomal protein S18 [Cucumis sativus]
gi|74027123|gb|AAZ94673.1| ribosomal protein S18 [Cucumis sativus]
gi|115432826|gb|ABI97439.1| ribosomal protein S18 [Cucumis sativus]
gi|115498325|gb|ABI98767.1| ribosomal protein S18 [Cucumis sativus]
Length = 104
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--PSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|313183909|ref|YP_004021763.1| ribosomal protein S18 [Equisetum arvense]
gi|281371629|gb|ADA63562.1| ribosomal protein S18 [Equisetum arvense]
Length = 75
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + RR+ P+ + IDYK+I LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKLRRFSRRRLPPI--RYGEIIDYKNISLLRRFISEQGKILSRRLNKLTSKQQRLMTVA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARVLALLPFLN 72
>gi|229577776|ref|YP_002836112.1| ribosomal protein S18 [Megaleranthis saniculifolia]
gi|226933904|gb|ACO92037.1| ribosomal protein S18 [Megaleranthis saniculifolia]
Length = 101
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|325106908|ref|YP_004267976.1| 30S ribosomal protein S18P [Planctomyces brasiliensis DSM 5305]
gi|324967176|gb|ADY57954.1| SSU ribosomal protein S18P [Planctomyces brasiliensis DSM 5305]
Length = 92
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 21 CPLSGKGAP----RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
C G +DYKD++ L + + + GKI P R + S QR + AI RAR++G
Sbjct: 25 CRFCPDGVVPRPVYVDYKDVKTLRQLIDREGKIQPRRRTGTSALYQRAVRHAILRARFMG 84
Query: 77 LIAYV 81
L+ YV
Sbjct: 85 LLPYV 89
>gi|301753317|ref|XP_002912508.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281346798|gb|EFB22382.1| hypothetical protein PANDA_000252 [Ailuropoda melanoleuca]
Length = 143
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L G R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPVPMENPYKEPLKK-CILCG---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +GL+
Sbjct: 105 QKEITKAIKRAQIMGLMPVT 124
>gi|297622258|ref|YP_003703692.1| 30S ribosomal protein S18 [Truepera radiovictrix DSM 17093]
gi|297163438|gb|ADI13149.1| ribosomal protein S18 [Truepera radiovictrix DSM 17093]
Length = 94
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP DY+D R+L RF+S KI+P R + V K QR LA IK+AR L ++
Sbjct: 26 KVCPFCTGEQEVTDYRDGRMLRRFISDTAKILPRRRTGVCAKHQRRLATTIKQARVLAIV 85
Query: 79 A 79
Sbjct: 86 P 86
>gi|159161272|ref|YP_001542550.1| ribosomal protein S18 [Cuscuta exaltata]
gi|205831384|sp|A8W3E3|RR18_CUSEX RecName: Full=Plastid 30S ribosomal protein S18
gi|158938697|gb|ABW83714.1| ribosomal protein S18 [Cuscuta exaltata]
Length = 117
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ RIDY++I L++RFLS++GKI+ R++ + K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPIK--SGDRIDYRNISLISRFLSEQGKILSKRVNRFTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIK+AR L L+ +
Sbjct: 60 RLITLAIKQARILSLLPFT 78
>gi|114804285|ref|YP_762283.1| ribosomal protein S18 [Morus indica]
gi|122166783|sp|Q09WZ5|RR18_MORIN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|78100337|gb|ABB20978.1| ribosomal protein S18 [Morus indica]
Length = 101
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILCLLPFLN 79
>gi|269124212|ref|YP_003306789.1| 30S ribosomal protein S18 [Streptobacillus moniliformis DSM
12112]
gi|268315538|gb|ACZ01912.1| ribosomal protein S18 [Streptobacillus moniliformis DSM 12112]
Length = 77
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
IDYK++ LL F++ +GKI PSR++ + K QR++AKAIKR+R + L+ Y +
Sbjct: 20 IEDIDYKNVDLLKNFMNDKGKISPSRVTGLDAKIQRKIAKAIKRSRQIALLPYTKI 75
>gi|331268135|ref|YP_004347784.1| ribosomal protein S18 [Chlorella variabilis]
gi|325296312|gb|ADZ05032.1| ribosomal protein S18 [Chlorella variabilis]
Length = 105
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ +LL +F+S +GKI+ R + ++ K+QR +A AIKRAR GL+ +VN
Sbjct: 44 TIDYKNTKLLVKFISPQGKILSRRATGLTAKQQRVMANAIKRARMGGLLPFVN 96
>gi|255993995|ref|ZP_05427130.1| ribosomal protein S18 [Eubacterium saphenum ATCC 49989]
gi|255993663|gb|EEU03752.1| ribosomal protein S18 [Eubacterium saphenum ATCC 49989]
Length = 77
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL++F+S+RGKI+P R++ S QRELAKAIK++R + L+ Y
Sbjct: 21 KKSDIDYKNVDLLSKFVSERGKILPKRVTGASSAMQRELAKAIKKSRVMALMPYT 75
>gi|189162293|ref|YP_001936539.1| ribosomal protein S18 [Fagopyrum esculentum subsp. ancestrale]
gi|166065379|gb|ABY79754.1| ribosomal protein S18 [Fagopyrum esculentum subsp. ancestrale]
Length = 101
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ RR+ PL + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRSFLKPKRPFRRRLPPL--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|149390290|ref|YP_001294120.1| ribosomal protein S18 [Chloranthus spicatus]
gi|205831381|sp|A6MME4|RR18_CHLSC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|146744210|gb|ABQ43282.1| ribosomal protein S18 [Chloranthus spicatus]
Length = 101
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S R++ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFRKSKRSFRKRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITTAIKQARILSSLPFLN 79
>gi|149194318|ref|ZP_01871415.1| 30S ribosomal protein S18 [Caminibacter mediatlanticus TB-2]
gi|149135493|gb|EDM23972.1| 30S ribosomal protein S18 [Caminibacter mediatlanticus TB-2]
Length = 93
Score = 89.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKD+ L+ LS+R KI+P R++ K Q + KAIKRAR + LI YV
Sbjct: 16 YCEMKVDYIGYKDLELIKYSLSERYKIMPRRLTGTCKKHQDMVQKAIKRARQVALIPYV 74
>gi|294791319|ref|ZP_06756476.1| ribosomal protein S18 [Scardovia inopinata F0304]
gi|294457790|gb|EFG26144.1| ribosomal protein S18 [Scardovia inopinata F0304]
Length = 85
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ LL +F+S RGKI RI+ V+ ++QR +A+AIK AR + L+ Y +
Sbjct: 23 AKITEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQRTIARAIKNAREMALLPYSS 79
>gi|126331100|ref|XP_001371066.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 171
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ K C L G R+DYK+++LL++F+S G I I+ + KK
Sbjct: 79 EDLPVPMEN-PYKESLKKCILCG---KRVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKK 134
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 135 QKEITKAIKRAQIMGFMPVT 154
>gi|315186485|gb|EFU20245.1| SSU ribosomal protein S18P [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P RR R+K ++ IDYK +L +FL++ GKI+P RI+ S K QR L
Sbjct: 28 PQDQPRRPYF-RKKVDKIALYKLE-IDYKKPEVLRQFLTENGKILPRRITGTSAKNQRRL 85
Query: 66 AKAIKRARYLGLIA 79
+ IK+AR L L+
Sbjct: 86 VREIKKARILALLP 99
>gi|326909415|ref|YP_004327684.1| ribosomal protein S18 [Hevea brasiliensis]
gi|308523529|gb|ADO33579.1| ribosomal protein S18 [Hevea brasiliensis]
Length = 94
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + +IDY+++ L++RF+S++GKI+ R++ +S K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDQIDYRNMSLISRFISEQGKILSRRVNRLSLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|157325552|ref|YP_001468330.1| ribosomal protein S18 [Ipomoea purpurea]
gi|205831395|sp|A7Y3G8|RR18_IPOPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|157056780|gb|ABV02370.1| ribosomal protein S18 [Ipomoea purpurea]
Length = 115
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAY 80
R + AIK+AR L L+ +
Sbjct: 60 RLITLAIKQARILSLLPF 77
>gi|88854480|ref|ZP_01129147.1| 30S ribosomal protein S18 [marine actinobacterium PHSC20C1]
gi|88816288|gb|EAR26143.1| 30S ribosomal protein S18 [marine actinobacterium PHSC20C1]
Length = 87
Score = 88.8 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + + P IDYKD+ L +F+S+RGKI RI+ VS ++QR +A A+K
Sbjct: 14 RKGKDGKNAAPAKSIRVGVIDYKDVATLRKFISERGKIRARRITGVSVQEQRLIATAVKN 73
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 74 AREMALLPY 82
>gi|290487246|gb|ADD30007.1| ribosomal protein S18 [Meliosma aff. cuneifolia Moore 333]
Length = 101
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKFKRPFLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|166235591|gb|ABY85504.1| ribosomal protein S18 [Silene littorea]
Length = 101
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY++ ++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPI--QPGDRIDYRNXSXISRFISEQGKILXRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITXAIKQARILSLLPFLN 79
>gi|13518460|ref|NP_084820.1| ribosomal protein S18 [Lotus japonicus]
gi|20978734|sp|Q9BBR1|RR18_LOTJA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|13359001|dbj|BAB33218.1| ribosomal protein S18 [Lotus japonicus]
Length = 104
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRFFRRRLPPI--QSGDRIDYKNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFIN 79
>gi|307683491|dbj|BAJ19724.1| ribosomal protein S18 [Pseudotsuga sinensis var. wilsoniana]
Length = 86
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P RRN++ RR P+ RIDYK++ L++RF+S++GKI+ R++ ++ K+QR
Sbjct: 8 PKRSFRRNLTPIRRHLSPI--GSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRL 65
Query: 65 LAKAIKRARYLGLIAYV 81
+ AIKRAR L L+ ++
Sbjct: 66 MTNAIKRARILSLLPFL 82
>gi|290487278|gb|ADD30023.1| ribosomal protein S18 [Quercus nigra]
Length = 102
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLYFKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLNLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ +++
Sbjct: 60 RLITIAIKQARILSLLPFLS 79
>gi|156618925|ref|YP_001430061.1| ribosomal protein S18 [Cuscuta gronovii]
gi|205831385|sp|A7M919|RR18_CUSGR RecName: Full=Plastid 30S ribosomal protein S18
gi|156555963|emb|CAM98347.1| ribosomal protein S18 [Cuscuta gronovii]
Length = 142
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S R+ P+ + RIDY++I LL RF+SQ+GKI+ R++ ++ K+QR L
Sbjct: 7 PFRKSKKSFRKPLPPI--QSGDRIDYQNIDLLRRFISQQGKILSRRVTRLTLKQQRLLNL 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 65 AIKQARILSFLPFTN 79
>gi|18860333|ref|NP_569651.1| ribosomal protein S18 [Psilotum nudum]
gi|20978677|sp|Q8WHZ9|RR18_PSINU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|18389486|dbj|BAB84238.1| ribosomal protein S18 [Psilotum nudum]
Length = 75
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S R++ + + IDYK+I LL RF+S+RGKI+ R++ ++ K+QR + +
Sbjct: 1 MKKSERSSRKRLS--ATVTSDLIDYKNIDLLRRFISERGKILSRRMTKLTSKQQRSVTVS 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR L L+ ++N
Sbjct: 59 IKRARILALLPFIN 72
>gi|148274145|ref|YP_001223706.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166220943|sp|A5CVA9|RS18_CLAM3 RecName: Full=30S ribosomal protein S18
gi|147832075|emb|CAN03048.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 87
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K AR + L+ Y
Sbjct: 24 PAKSIRVGVIDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAVKNAREMALLPY 82
>gi|313183844|ref|YP_004021687.1| ribosomal protein S18 [Prunus persica]
gi|309321456|gb|ADO64997.1| ribosomal protein S18 [Prunus persica]
Length = 100
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + LL+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRILLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|313199617|ref|YP_004021233.1| ribosomal protein S18 [Isoetes flaccida]
gi|291575346|gb|ADE18059.1| ribosomal protein S18 [Isoetes flaccida]
Length = 75
Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S R++S P+ + +DYK+I LL F+S+RGKI+ R++ ++ K+QR + A
Sbjct: 1 MGKSERSSRKRSPPI--RSGETVDYKNISLLCGFISKRGKILSKRMNRLTSKQQRLMTIA 58
Query: 69 IKRARYLGLIAYVN 82
+KRAR L L+ +VN
Sbjct: 59 VKRARILALLPFVN 72
>gi|91214164|ref|YP_538786.1| ribosomal protein S18 [Glycine max]
gi|122245075|sp|Q2PMR2|RR18_SOYBN RecName: Full=30S ribosomal protein S18, chloroplastic
gi|83595765|gb|ABC25146.1| ribosomal protein S18 [Glycine max]
Length = 103
Score = 88.0 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + ++ S RR+ P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFMKSKRSFRRRLPPI--QSGDRIDYKNMGLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|149199262|ref|ZP_01876300.1| 30S ribosomal protein S18 [Lentisphaera araneosa HTCC2155]
gi|149137687|gb|EDM26102.1| 30S ribosomal protein S18 [Lentisphaera araneosa HTCC2155]
Length = 78
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
MA P R+ + R K C S + ID+ D +L +F+++ G+I+P RI+ VS +
Sbjct: 1 MANQRRKPK-RKKAAVRAKVCRFSEQKVTYIDFTDADVLKKFMTEGGRILPRRITGVSKR 59
Query: 61 KQRELAKAIKRARYLGLI 78
Q LA AIKRAR + L+
Sbjct: 60 YQAMLASAIKRARNIALV 77
>gi|170783385|ref|YP_001711719.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
sepedonicus]
gi|189029671|sp|B0RDN6|RS18_CLAMS RecName: Full=30S ribosomal protein S18
gi|169157955|emb|CAQ03165.1| 30S ribosomal protein S18 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 87
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
P IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K AR + L+ Y
Sbjct: 24 PAKSIRVGVIDYKDVATLRKFISERGKIRARRITGVSVQEQRLIARAVKNAREMALLPY 82
>gi|163847275|ref|YP_001635319.1| 30S ribosomal protein S18 [Chloroflexus aurantiacus J-10-fl]
gi|222525118|ref|YP_002569589.1| 30S ribosomal protein S18 [Chloroflexus sp. Y-400-fl]
gi|189029670|sp|A9WCD9|RS18_CHLAA RecName: Full=30S ribosomal protein S18
gi|254765420|sp|B9LER9|RS18_CHLSY RecName: Full=30S ribosomal protein S18
gi|163668564|gb|ABY34930.1| ribosomal protein S18 [Chloroflexus aurantiacus J-10-fl]
gi|222448997|gb|ACM53263.1| ribosomal protein S18 [Chloroflexus sp. Y-400-fl]
Length = 81
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ C + G DYKD++ L ++L+ +GKI+P R + VS K QR LA AIKRAR+L
Sbjct: 13 RRRECEFTKLGIVP-DYKDVKRLQKYLTAQGKILPRRRTGVSAKMQRRLAVAIKRARHLA 71
Query: 77 LIA 79
L+
Sbjct: 72 LLP 74
>gi|229915540|gb|ACQ90884.1| ribosomal protein S18 [Pedinomonas minor]
Length = 79
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 42/53 (79%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDYK++ LL +F++ GKI+P R++S++ K+ R ++KAIK AR +GL+ +VN
Sbjct: 24 RIDYKNVLLLRKFITIEGKILPRRLTSLTAKQHRSISKAIKNARMMGLLPFVN 76
>gi|222084106|ref|YP_002519559.1| ribosomal protein S18 [Keteleeria davidiana]
gi|220983658|dbj|BAH11424.1| ribosomal protein S18 [Keteleeria davidiana]
Length = 86
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E R RR P+ RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 6 EKPKRSFRRHLTPIRRHLSPI--GSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIKRAR L L+ ++
Sbjct: 64 RLMTNAIKRARILSLLPFL 82
>gi|196000654|ref|XP_002110195.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
gi|190588319|gb|EDV28361.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
Length = 127
Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 7 TPLLRRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
T + R K CP+ YKD+ LL +F+S G+I R + + K+
Sbjct: 34 TTFKKLPQETREKMQNHGCPICRNNIKNFGYKDVLLLKQFISDEGRIYGKRKTGLCAKQH 93
Query: 63 RELAKAIKRARYLGLIA 79
R++ KAIKR+R GL+
Sbjct: 94 RKVLKAIKRSRAEGLLP 110
>gi|219848368|ref|YP_002462801.1| 30S ribosomal protein S18 [Chloroflexus aggregans DSM 9485]
gi|254765419|sp|B8G975|RS18_CHLAD RecName: Full=30S ribosomal protein S18
gi|219542627|gb|ACL24365.1| ribosomal protein S18 [Chloroflexus aggregans DSM 9485]
Length = 81
Score = 87.6 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
RR+ C + G DYKD++ L ++L+ +GKI+P R + VS K QR LA AIKRAR+L
Sbjct: 13 RRRECEFTKLGIVP-DYKDVKRLQKYLTAQGKILPRRRTGVSAKMQRRLAVAIKRARHLA 71
Query: 77 LIA 79
L+
Sbjct: 72 LLP 74
>gi|225544145|ref|YP_002720134.1| rps18 [Jatropha curcas]
gi|224979586|gb|ACN72713.1| rps18 [Jatropha curcas]
Length = 108
Score = 87.6 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ +S K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLSLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|297838029|ref|XP_002886896.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
gi|297332737|gb|EFH63155.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
Length = 101
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + A
Sbjct: 8 FTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|69216267|gb|AAZ03914.1| ribosomal protein S18 [Ginkgo biloba]
Length = 83
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR P+ + +ID+K++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 5 MNQSKRSFRRHLPPI--RSGDQIDHKNMSLISRFVSEQGKILSRRVNRLTSKQQRLMTIA 62
Query: 69 IKRARYLGLIAYVN 82
IKRAR L + ++N
Sbjct: 63 IKRARILSSLPFLN 76
>gi|309322356|ref|YP_003934207.1| ribosomal protein S18 [Cedrus deodara]
gi|62287468|sp|Q85UZ5|RR18_LAROX RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62287469|sp|Q85UZ8|RR18_LARLA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|62287470|sp|Q85V01|RR18_LARDC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30171092|gb|AAN18224.1| Rps18 [Larix sibirica]
gi|30171097|gb|AAN18227.1| Rps18 [Larix gmelinii]
gi|30171102|gb|AAN18230.1| Rps18 [Larix kaempferi]
gi|30171107|gb|AAN18233.1| Rps18 [Larix decidua]
gi|30171112|gb|AAN18236.1| Rps18 [Larix laricina]
gi|30171117|gb|AAN18239.1| Rps18 [Larix occidentalis]
gi|30171122|gb|AAN18242.1| Rps18 [Larix lyallii]
gi|30171127|gb|AAN18245.1| Rps18 [Larix potaninii]
gi|30171132|gb|AAN18248.1| Rps18 [Larix mastersiana]
gi|30171137|gb|AAN18251.1| Rps18 [Larix griffithiana]
gi|228017072|gb|ACP51894.1| ribosomal protein S18 [Cedrus deodara]
gi|228017382|gb|ACP52199.1| ribosomal protein S18 [Larix occidentalis]
gi|307683282|dbj|BAJ19590.1| ribosomal protein S18 [Cedrus deodara]
gi|307683585|dbj|BAJ19771.1| ribosomal protein S18 [Larix decidua]
Length = 86
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ R RR P+ RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 6 DKPKRSFRRHLTPIRRHLSPI--GSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIKRAR L L+ ++
Sbjct: 64 RLMTNAIKRARILSLLPFL 82
>gi|290487260|gb|ADD30014.1| ribosomal protein S18 [Bulnesia arborea]
Length = 105
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ LLNRFLS++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNLSLLNRFLSEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLVTIAIKQARILSLLPFMN 79
>gi|260891623|ref|ZP_05902886.1| ribosomal protein S18 [Leptotrichia hofstadii F0254]
gi|260858633|gb|EEX73133.1| ribosomal protein S18 [Leptotrichia hofstadii F0254]
Length = 79
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKRAR + L+ Y +
Sbjct: 22 VEDINYKNVELLKNFMNDKGKISPARVTGLEAKVQRKIAKAIKRARQIALMPYTKI 77
>gi|91208924|ref|YP_538957.1| ribosomal protein S18 [Gossypium hirsutum]
gi|325210951|ref|YP_004286026.1| ribosomal protein S18 [Gossypium thurberi]
gi|122226163|sp|Q2L928|RR18_GOSHI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|85687438|gb|ABC73650.1| ribosomal protein S18 [Gossypium hirsutum]
gi|290775813|gb|ADD62309.1| ribosomal protein S18 [Gossypium thurberi]
Length = 101
Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|12835208|dbj|BAB23188.1| unnamed protein product [Mus musculus]
Length = 143
Score = 87.6 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPVPMENPYKEPLKK-CVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLGLIAYV 81
QRE+ KAIKRA+ +G +
Sbjct: 105 QREITKAIKRAQKMGFMPVT 124
>gi|197294134|ref|YP_002149755.1| ribosomal protein S18 [Cicer arietinum]
gi|197089822|gb|ACH41092.1| ribosomal protein S18 [Cicer arietinum]
Length = 108
Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR P+ + RIDYK++ LL RF+SQ+GKI+ R++ +S K+Q
Sbjct: 2 DKSKRLFLKSKQSFRRSLSPI--QSGDRIDYKNMSLLYRFISQQGKILSRRVNRLSLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ + N
Sbjct: 60 RLITIAIKQARILSLLPFAN 79
>gi|139390370|ref|YP_001122968.1| ribosomal protein S18 [Aethionema cordifolium]
gi|205831412|sp|A4QJD7|RR18_AETCO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286163|dbj|BAF49792.1| ribosomal protein S18 [Aethionema cordifolium]
Length = 101
Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + A
Sbjct: 8 FPKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFIN 79
>gi|167957110|ref|ZP_02544184.1| 30S ribosomal protein S18 [candidate division TM7 single-cell
isolate TM7c]
gi|169838318|ref|ZP_02871506.1| ribosomal protein S18 [candidate division TM7 single-cell isolate
TM7a]
Length = 66
Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
DYKD + L RF+ GKI P + +S K+QR+LA AIKRAR+L L+ +V
Sbjct: 4 RFKKDTPSHFDYKDAKTLLRFVDAYGKIEPIGRTGLSVKQQRQLAVAIKRARHLALLPFV 63
Query: 82 N 82
+
Sbjct: 64 S 64
>gi|139389286|ref|YP_001123052.1| ribosomal protein S18 [Aethionema grandiflorum]
gi|205831413|sp|A4QJM1|RR18_AETGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286248|dbj|BAF49876.1| ribosomal protein S18 [Aethionema grandiflorum]
Length = 101
Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + A
Sbjct: 8 FPKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITSA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFIN 79
>gi|114050735|ref|NP_001039973.1| 28S ribosomal protein S18c, mitochondrial precursor [Bos taurus]
gi|108935898|sp|P82917|RT18C_BOVIN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|86827491|gb|AAI12819.1| Mitochondrial ribosomal protein S18C [Bos taurus]
gi|296486363|gb|DAA28476.1| 28S ribosomal protein S18c, mitochondrial precursor [Bos taurus]
Length = 143
Score = 87.2 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
+E P P+ +K C L R+DYK+++LL++F+S G I I+ + K
Sbjct: 48 SEDLPIPMENPYKEPLKK-CILCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGK 103
Query: 61 KQRELAKAIKRARYLGLIAYV 81
KQRE+ KAIKRA+ LG +
Sbjct: 104 KQREITKAIKRAQILGFMPVT 124
>gi|163783217|ref|ZP_02178211.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881551|gb|EDP75061.1| ribosomal protein S18 [Hydrogenivirga sp. 128-5-R1-1]
Length = 73
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
+ RR+ C DYK+ L +F++ R +I R + + +K Q+ LA I
Sbjct: 1 MAIKRPARRRVCYYCENKKEP-DYKNYEELRQFMTDRARIKSRRQTGLCNKHQKRLALQI 59
Query: 70 KRARYLGLIAYV 81
KRAR L L+ YV
Sbjct: 60 KRARQLALLPYV 71
>gi|320531754|ref|ZP_08032683.1| ribosomal protein S18 [Actinomyces sp. oral taxon 171 str. F0337]
gi|325066293|ref|ZP_08124966.1| 30S ribosomal protein S18 [Actinomyces oris K20]
gi|326772815|ref|ZP_08232099.1| ribosomal protein S18 [Actinomyces viscosus C505]
gi|329944676|ref|ZP_08292786.1| ribosomal protein S18 [Actinomyces sp. oral taxon 170 str. F0386]
gi|320136017|gb|EFW28036.1| ribosomal protein S18 [Actinomyces sp. oral taxon 171 str. F0337]
gi|326637447|gb|EGE38349.1| ribosomal protein S18 [Actinomyces viscosus C505]
gi|328530090|gb|EGF56976.1| ribosomal protein S18 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 78
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD L +F+S RGKI R++ VS ++QR++AKA+K AR + L+ Y +
Sbjct: 18 AIKVGTIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRKIAKAVKNAREMALLPYSS 75
>gi|139387474|ref|YP_001122828.1| ribosomal protein S18 [Phaseolus vulgaris]
gi|205831409|sp|A4GGC7|RR18_PHAVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112030996|gb|ABH88108.1| ribosomal protein S18 [Phaseolus vulgaris]
gi|158187128|gb|ABW22761.1| ribosomal protein S18 [Phaseolus vulgaris]
Length = 102
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + ++ S RR+ P+ + RIDYK++ L+ RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFIKSKRSFRRRLPPI--QSGDRIDYKNMGLICRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|260905003|ref|ZP_05913325.1| SSU ribosomal protein S18P [Brevibacterium linens BL2]
Length = 79
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +R+ + ++K+ PL A +I YKD L +F+S RGKI R++ V+ ++QR +A
Sbjct: 3 KPEIRKPI--KKKANPLKKGEAAKIHYKDTATLRKFISDRGKIRARRVTGVTVQEQRVIA 60
Query: 67 KAIKRARYLGLIAYVN 82
KA+K AR + L+ Y +
Sbjct: 61 KAVKNAREMALLPYSS 76
>gi|7524804|ref|NP_045806.1| ribosomal protein S18 [Chlorella vulgaris]
gi|3024563|sp|P56353|RR18_CHLVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|2224397|dbj|BAA57881.1| 30S ribosomal protein S18 [Chlorella vulgaris]
Length = 103
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+ +LL +F+S +GKI+ R + ++ K+QR +A AIKRAR GL+ +VN
Sbjct: 45 IDYKNTQLLVKFISPQGKILSRRATGLTAKQQRIMANAIKRARMGGLVPFVN 96
>gi|297170210|gb|ADI21248.1| hypothetical protein [uncultured myxobacterium HF0010_08B07]
Length = 68
Score = 86.9 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ + IDY+D L F+S+ GKI+ SR + ++ K+QR+L KAIK+AR LGL+ + +
Sbjct: 2 TEEKKISIDYRDPDTLKGFISENGKILSSRYTRLNAKEQRKLTKAIKKARLLGLLPFTD 60
>gi|71842240|ref|YP_277328.1| ribosomal protein S18 [Emiliania huxleyi]
gi|122233608|sp|Q4G3D9|RR18_EMIHU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|60101483|gb|AAX13827.1| ribosomal protein S18 [Emiliania huxleyi]
Length = 72
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 21 CPLSGKGAPRID----YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
P+ ++ YKD+ +L+ F++++GKI+P R++ + K+Q+++ K IK+AR
Sbjct: 4 NPIKANLGEEVNNSLNYKDVSILSNFVNEQGKILPRRLTGLKSKQQKKVTKLIKQARIAA 63
Query: 77 LIAYV 81
L+ +V
Sbjct: 64 LLPFV 68
>gi|326428552|gb|EGD74122.1| 30S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
Length = 165
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHK 60
A P R V+ +CP IDYK++R L++F+S + G+I+ + + K
Sbjct: 67 ARGHDLPETAREVTQGCPACPYK----EEIDYKNVRFLSQFVSPQTGQILRRSSTGLCSK 122
Query: 61 KQRELAKAIKRARYLGLIAYV 81
QR++AKAIKR+R+ GL+ +V
Sbjct: 123 AQRKIAKAIKRSRHFGLMPHV 143
>gi|156618845|ref|YP_001430127.1| ribosomal protein S18 [Cuscuta reflexa]
gi|205831387|sp|A7M985|RR18_CUSRE RecName: Full=Plastid 30S ribosomal protein S18
gi|156556030|emb|CAM98413.1| ribosomal protein S18 [Cuscuta reflexa]
Length = 109
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ RIDY++I L++RFLS++GKI+ R+ + K+Q
Sbjct: 2 DKSKRPFIKSKRSFRRRLPPIK--SGDRIDYRNISLISRFLSEQGKILSKRVHRFTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIK+AR L L+ +
Sbjct: 60 RLITLAIKQARILSLLPFT 78
>gi|7525055|ref|NP_051081.1| ribosomal protein S18 [Arabidopsis thaliana]
gi|139387274|ref|YP_001123395.1| ribosomal protein S18 [Capsella bursa-pastoris]
gi|139388116|ref|YP_001123308.1| ribosomal protein S18 [Barbarea verna]
gi|139389118|ref|YP_001123836.1| ribosomal protein S18 [Nasturtium officinale]
gi|139389440|ref|YP_001123137.1| ribosomal protein S18 [Olimarabidopsis pumila]
gi|139389823|ref|YP_001123484.1| ribosomal protein S18 [Crucihimalaya wallichii]
gi|297840923|ref|XP_002888343.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
gi|6685922|sp|P56807|RR18_ARATH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831382|sp|A4QKV3|RR18_CRUWA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831402|sp|A4QLV5|RR18_NASOF RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831407|sp|A4QJV3|RR18_OLIPU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831417|sp|A4QKC7|RR18_BARVE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831419|sp|A4QKL4|RR18_CAPBU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|5881716|dbj|BAA84407.1| ribosomal protein S18 [Arabidopsis thaliana]
gi|134286334|dbj|BAF49961.1| ribosomal protein S18 [Olimarabidopsis pumila]
gi|134286507|dbj|BAF50132.1| ribosomal protein S18 [Barbarea verna]
gi|134286595|dbj|BAF50219.1| ribosomal protein S18 [Capsella bursa-pastoris]
gi|134286685|dbj|BAF50308.1| ribosomal protein S18 [Crucihimalaya wallichii]
gi|134287041|dbj|BAF50660.1| ribosomal protein S18 [Nasturtium officinale]
gi|297334184|gb|EFH64602.1| ribosomal protein S18 [Arabidopsis lyrata subsp. lyrata]
Length = 101
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + A
Sbjct: 8 FTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|58037129|ref|NP_081102.1| 28S ribosomal protein S18c, mitochondrial precursor [Mus musculus]
gi|24212186|sp|Q8R2L5|RT18C_MOUSE RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|20306712|gb|AAH28442.1| Mitochondrial ribosomal protein S18C [Mus musculus]
gi|74219265|dbj|BAE26766.1| unnamed protein product [Mus musculus]
gi|148688329|gb|EDL20276.1| mitochondrial ribosomal protein S18C, isoform CRA_c [Mus musculus]
Length = 143
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPVPMENPYKEPLKK-CVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLGLIAYV 81
QRE+ KAIKRA+ +G +
Sbjct: 105 QREITKAIKRAQKMGFMPVT 124
>gi|153012191|ref|YP_001381706.1| ribosomal protein S18 [Medicago truncatula]
Length = 106
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ RIDYK++ LL RF+S++GKI+ R++ + K+QR + AIK+AR L L+ +V+
Sbjct: 5 QSGDRIDYKNMSLLYRFISRQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVSF 62
>gi|297673900|ref|XP_002814984.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pongo
abelii]
Length = 144
Score = 86.9 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L G +DYK+++LL++F+S G I I+ + KK
Sbjct: 50 EDLPIPMENPYKEPLKK-CILCG---KHVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKK 105
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 106 QKEITKAIKRAQIMGFMPVT 125
>gi|69216275|gb|AAZ03918.1| ribosomal protein S18 [Yucca schidigera]
Length = 101
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQPFRKSKRSFRRRFPPI--ESGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ ++N
Sbjct: 60 RLITIAIKQARILSLLPFLN 79
>gi|332233407|ref|XP_003265893.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 1
[Nomascus leucogenys]
gi|332233409|ref|XP_003265894.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 2
[Nomascus leucogenys]
gi|332233411|ref|XP_003265895.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like isoform 3
[Nomascus leucogenys]
Length = 144
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L G +DYK+++LL++F+S G I I+ + KK
Sbjct: 50 EDLPIPMENPYKEPLKK-CILCG---KHVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKK 105
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 106 QKEITKAIKRAQIMGFMPVT 125
>gi|328948105|ref|YP_004365442.1| 30S ribosomal protein S18 [Treponema succinifaciens DSM 2489]
gi|328448429|gb|AEB14145.1| 30S ribosomal protein S18 [Treponema succinifaciens DSM 2489]
Length = 104
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+K C IDYKD L RF ++RGKI+P RI+ + Q+E+A AIKRA
Sbjct: 35 KFFSHKKVCRFCANKGK-IDYKDADGLRRFTTERGKILPRRITGTCSRHQKEVAAAIKRA 93
Query: 73 RYLGLIAYV 81
R + L+ +V
Sbjct: 94 RAICLLPFV 102
>gi|257125009|ref|YP_003163123.1| ribosomal protein S18 [Leptotrichia buccalis C-1013-b]
gi|257048948|gb|ACV38132.1| ribosomal protein S18 [Leptotrichia buccalis C-1013-b]
Length = 79
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKRAR + L+ Y +
Sbjct: 22 VEDINYKNVELLKNFMNDKGKISPARVTGLEAKIQRKIAKAIKRARQIALMPYTKI 77
>gi|169794095|ref|YP_001718459.1| ribosomal protein S18 [Manihot esculenta]
gi|205831401|sp|B1NWH2|RR18_MANES RecName: Full=30S ribosomal protein S18, chloroplastic
gi|157695907|gb|ABV66176.1| ribosomal protein S18 [Manihot esculenta]
Length = 94
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ +S K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLSLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|225434578|ref|XP_002279055.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1200
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R + + + + D++++R L F+++ G I+ + +S K QR++A+ IK
Sbjct: 111 RKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKTGISAKAQRKVAREIKT 170
Query: 72 ARYLGLIAYVNL 83
AR GL+ + +
Sbjct: 171 ARAFGLMPFTTM 182
>gi|167391827|ref|YP_001671705.1| ribosomal protein S18 [Carica papaya]
gi|205831420|sp|B1A957|RR18_CARPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|166344154|gb|ABY86804.1| ribosomal protein S18 [Carica papaya]
Length = 101
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + + S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|166235789|gb|ABY85693.1| ribosomal protein S18 [Silene fruticosa]
Length = 113
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P ++ S RR+ P+ + RIDY+++RL+NRF S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSXRPFIKSKRSFRRRLPPI--QPGDRIDYRNMRLINRFSSEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAY 80
R + AIKRAR L L+ +
Sbjct: 60 RLITIAIKRARILALLPF 77
>gi|133854414|gb|ABO39212.1| ribosomal protein S18 [Theobroma cacao]
Length = 82
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|228016567|gb|ACP51397.1| ribosomal protein S18 [Abies firma]
Length = 93
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ R RR P+ RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 13 DKPKRSFRRHLTPIRRHLSPI--GSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQ 70
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIKRAR L L+ ++
Sbjct: 71 RLMTNAIKRARILSLLPFL 89
>gi|313199724|ref|YP_004021338.1| ribosomal protein S18 [Theobroma cacao]
gi|309321288|gb|ADO64831.1| ribosomal protein S18 [Theobroma cacao]
gi|328924802|gb|ADO64912.2| ribosomal protein S18 [Theobroma cacao]
Length = 101
Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|224179528|ref|YP_002601063.1| ribosomal protein S18 [Monomastix sp. OKE-1]
gi|217314571|gb|ACK36914.1| ribosomal protein S18 [Monomastix sp. OKE-1]
Length = 62
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+IDYKD+ L RF++++GKI+ R + + K+QREL KA+K+AR LGL+ +
Sbjct: 2 KQTQIDYKDVAYLRRFITEQGKILSRRFTGLKAKQQRELTKAVKQARILGLLGF 55
>gi|302822972|ref|XP_002993141.1| hypothetical protein SELMODRAFT_431295 [Selaginella moellendorffii]
gi|300139032|gb|EFJ05781.1| hypothetical protein SELMODRAFT_431295 [Selaginella moellendorffii]
Length = 341
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+A PT + +R +K+ L+ D+++I+ L+ FLS+ +I+P + +S+S K
Sbjct: 220 IASSDPTEMPQRQKKVMKKNEVLAAA-----DFRNIKFLSLFLSETSRILPRKTTSISLK 274
Query: 61 KQRELAKAIKRARYLGLIAYVNL 83
QR +A+ IK AR LGL+ Y ++
Sbjct: 275 SQRRIAREIKTARSLGLLPYSSM 297
>gi|262277395|ref|ZP_06055188.1| ribosomal protein S18 [alpha proteobacterium HIMB114]
gi|262224498|gb|EEY74957.1| ribosomal protein S18 [alpha proteobacterium HIMB114]
Length = 88
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+K+CPL+ K I+YK+I+LL +++S KI+P+RI++VSH KQ+ L K IK+AR L L
Sbjct: 23 KKNCPLAKKSDEEINYKNIKLLKKYISDSAKILPTRITNVSHGKQKILVKEIKKARALAL 82
Query: 78 IAYVN 82
+ YV
Sbjct: 83 LPYVG 87
>gi|290487280|gb|ADD30024.1| ribosomal protein S18 [Staphylea colchica]
Length = 101
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QPGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|310779633|ref|YP_003967966.1| SSU ribosomal protein S18P [Ilyobacter polytropus DSM 2926]
gi|309748956|gb|ADO83618.1| SSU ribosomal protein S18P [Ilyobacter polytropus DSM 2926]
Length = 75
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
IDYK+ LL F++ +G+I P+R++ S K QR++AKA+KRAR + LI Y +
Sbjct: 18 IEEIDYKNADLLKNFINDKGRIKPARVNGASAKLQRKIAKAVKRARNIALIPYTKV 73
>gi|156598372|gb|ABU85446.1| ribosomal protein S18 [Musa acuminata]
Length = 101
Score = 86.1 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 42/56 (75%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 24 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|38258439|sp|Q85UY0|RR18_PSEMZ RecName: Full=30S ribosomal protein S18, chloroplastic
gi|30171142|gb|AAN18254.1| Rps18 [Pseudotsuga menziesii]
Length = 86
Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P RRN++ RR P+ RIDYK++ L++RF+S++G I+ R++ ++ K+QR
Sbjct: 8 PKRSFRRNLTPIRRHLSPI--GSGDRIDYKNMSLISRFISEQGXILSGRVNRLTSKQQRL 65
Query: 65 LAKAIKRARYLGLIAYV 81
+ AIKRAR L L+ ++
Sbjct: 66 MTNAIKRARILSLLPFL 82
>gi|289066848|ref|YP_003434366.1| ribosomal protein S18 [Vigna radiata]
gi|259020035|gb|ACV90233.1| ribosomal protein S18 [Vigna radiata]
Length = 102
Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E + ++ S RR+ P+ + RIDYK++ L+ RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 EKSKRLFIKSKRSFRRRLPPI--QSGDRIDYKNMGLICRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++
Sbjct: 60 RLITIAIKQARILSSLPFLT 79
>gi|327537748|gb|EGF24453.1| Ribosomal protein S18 [Rhodopirellula baltica WH47]
Length = 138
Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 85 YVDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 137
>gi|7705630|ref|NP_057151.1| 28S ribosomal protein S18c, mitochondrial precursor [Homo sapiens]
gi|55622668|ref|XP_517249.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial isoform 2 [Pan
troglodytes]
gi|332819380|ref|XP_003310352.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819382|ref|XP_003339105.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819384|ref|XP_003310353.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|332819386|ref|XP_003310355.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan
troglodytes]
gi|24212202|sp|Q9Y3D5|RT18C_HUMAN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|4929737|gb|AAD34129.1|AF151892_1 CGI-134 protein [Homo sapiens]
gi|13528768|gb|AAH05186.1| Mitochondrial ribosomal protein S18C [Homo sapiens]
gi|119626343|gb|EAX05938.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|119626345|gb|EAX05940.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|312150164|gb|ADQ31594.1| mitochondrial ribosomal protein S18C [synthetic construct]
Length = 142
Score = 86.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 63 KKCILCG---KHVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 119
Query: 78 IAYV 81
+
Sbjct: 120 MPVT 123
>gi|297565278|ref|YP_003684250.1| 30S ribosomal protein S18 [Meiothermus silvanus DSM 9946]
gi|296849727|gb|ADH62742.1| ribosomal protein S18 [Meiothermus silvanus DSM 9946]
Length = 97
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ +L RFLS+ GKI+P R + ++ ++QR++A+ IKRAR LGL+ + +
Sbjct: 42 DYKNVEVLKRFLSETGKILPRRRTGLNAQEQRKIARTIKRARMLGLLPFTD 92
>gi|194132125|gb|ACF33379.1| ribosomal protein S18 [Gonystylus bancanus]
Length = 101
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSLRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|114329768|ref|YP_740587.1| ribosomal protein S18 [Platanus occidentalis]
gi|122166014|sp|Q09G24|RR18_PLAOC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|114054406|gb|ABI49800.1| ribosomal protein S18 [Platanus occidentalis]
Length = 101
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 66 IKQARILSSLPFLN 79
>gi|110456774|gb|ABG74861.1| ribosomal protein S18 [Menodora longiflora]
Length = 123
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RR+ +ID+ + LLN+F+SQ+GKI+ R++ ++ K+QR + AIK+A
Sbjct: 22 QSFRRRRPSI----PPGQIDFTNTSLLNQFISQQGKILSRRVTRLTLKQQRLMTIAIKQA 77
Query: 73 RYLGLIAYVN 82
R L L+ +V+
Sbjct: 78 RILALLPFVS 87
>gi|146216939|ref|NP_817180.2| ribosomal protein S18 [Pinus koraiensis]
Length = 89
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 13 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 70
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 71 NAIKRARILSLLPFL 85
>gi|114329990|ref|YP_740672.1| ribosomal protein S18 [Nandina domestica]
gi|122165940|sp|Q09FT9|RR18_NANDO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|114054492|gb|ABI49885.1| ribosomal protein S18 [Nandina domestica]
Length = 100
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 7 FLKSKRSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 64
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + ++N
Sbjct: 65 IKQARILSSLPFLN 78
>gi|50346804|ref|YP_053177.1| ribosomal protein S18 [Nymphaea alba]
gi|62287435|sp|Q6EW31|RR18_NYMAL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50250349|emb|CAF28615.1| ribosomal protein S18 [Nymphaea alba]
Length = 101
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 43/54 (79%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+P R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 26 DRIDYRNMSLISRFISEQGKILPRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|108773275|ref|YP_635768.1| ribosomal protein S18 [Chara vulgaris]
gi|122231310|sp|Q1ACH9|RR18_CHAVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|77157931|gb|ABA61972.1| ribosomal protein S18 [Chara vulgaris]
Length = 78
Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RR+ P+ +IDYK++ LL RFLS++GKI+ R++ ++ K+QR + AIKRA
Sbjct: 8 KQRSRRRLPPIK--SGEKIDYKNLDLLRRFLSEQGKILSKRVNRLTSKQQRTMTIAIKRA 65
Query: 73 RYLGLIAYVN 82
R L LI ++N
Sbjct: 66 RILALIPFLN 75
>gi|121720635|ref|YP_001001556.1| ribosomal protein S18 [Nuphar advena]
gi|69216269|gb|AAZ03915.1| ribosomal protein S18 [Nuphar advena]
gi|84682226|gb|ABC60480.1| ribosomal protein S18 [Nuphar advena]
Length = 101
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 43/54 (79%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+P R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 26 DRIDYRNMSLISRFISEQGKILPRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|290487274|gb|ADD30021.1| ribosomal protein S18 [Oxalis latifolia]
Length = 101
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ +Q
Sbjct: 2 DKSKRFFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLNQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITVAIKQARILSSLPFLN 79
>gi|237688594|ref|YP_002905211.1| ribosomal protein S18 [Pinus gerardiana]
gi|237688662|ref|YP_002905278.1| ribosomal protein S18 [Pinus krempfii]
gi|324986361|ref|YP_004276233.1| ribosomal protein S18 [Pinus lambertiana]
gi|62287473|sp|Q85X35|RR18_PINKO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|29469700|gb|AAO74028.1| ribosomal protein S18 [Pinus koraiensis]
gi|226876055|gb|ACO89311.1| ribosomal protein S18 [Pinus gerardiana]
gi|226951120|gb|ACO94183.1| ribosomal protein S18 [Pinus krempfii]
gi|228016185|gb|ACP51021.1| ribosomal protein S18 [Pinus squamata]
gi|228016249|gb|ACP51084.1| ribosomal protein S18 [Pinus strobus]
gi|228016626|gb|ACP51455.1| ribosomal protein S18 [Pinus albicaulis]
gi|228016759|gb|ACP51586.1| ribosomal protein S18 [Pinus armandii]
gi|228016882|gb|ACP51707.1| ribosomal protein S18 [Pinus ayacahuite]
gi|228017129|gb|ACP51950.1| ribosomal protein S18 [Pinus cembra]
gi|228017250|gb|ACP52069.1| ribosomal protein S18 [Pinus flexilis]
gi|228017316|gb|ACP52134.1| ribosomal protein S18 [Pinus lambertiana]
gi|228017509|gb|ACP52324.1| ribosomal protein S18 [Pinus monticola]
gi|228017572|gb|ACP52386.1| ribosomal protein S18 [Pinus parviflora var. pentaphylla]
gi|228017636|gb|ACP52449.1| ribosomal protein S18 [Pinus peuce]
gi|257042531|gb|ACV32805.1| ribosomal protein S18 [Pinus monticola]
gi|257042559|gb|ACV32832.1| ribosomal protein S18 [Pinus monticola]
gi|257042589|gb|ACV32861.1| ribosomal protein S18 [Pinus monticola]
gi|257042618|gb|ACV32889.1| ribosomal protein S18 [Pinus monticola]
gi|257042674|gb|ACV32943.1| ribosomal protein S18 [Pinus monticola]
gi|257042704|gb|ACV32972.1| ribosomal protein S18 [Pinus monticola]
gi|257042758|gb|ACV33024.1| ribosomal protein S18 [Pinus monticola]
gi|257042786|gb|ACV33051.1| ribosomal protein S18 [Pinus monticola]
gi|323514210|gb|ADX89757.1| ribosomal protein S18 [Pinus lambertiana]
Length = 93
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|262201428|ref|YP_003272636.1| 30S ribosomal protein S18 [Gordonia bronchialis DSM 43247]
gi|262084775|gb|ACY20743.1| ribosomal protein S18 [Gordonia bronchialis DSM 43247]
Length = 84
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAP-----RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
P R R+ L+ +G +DYKDI LL FLS RGKI ++ ++ ++
Sbjct: 3 KPNRRVAAPTRKHRNQLAAQGVRVDGRSPVDYKDIALLRTFLSDRGKIRSRSVTGLTPQQ 62
Query: 62 QRELAKAIKRARYLGLIAY 80
QR++A AI+ AR + L+ Y
Sbjct: 63 QRQVATAIRNAREMALLPY 81
>gi|269118806|ref|YP_003306983.1| ribosomal protein S18 [Sebaldella termitidis ATCC 33386]
gi|268612684|gb|ACZ07052.1| ribosomal protein S18 [Sebaldella termitidis ATCC 33386]
Length = 74
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++A AIKR+R + L+ Y +
Sbjct: 17 VEDINYKNVELLKNFMNDKGKISPARVTGLDAKIQRKIAAAIKRSRQIALLPYTKI 72
>gi|325126887|ref|YP_004286124.1| ribosomal protein S18 [Fragaria vesca subsp. vesca]
gi|324022799|gb|ADY15373.1| ribosomal protein S18 [Fragaria vesca subsp. vesca]
Length = 101
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRIFLKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSPLPFLN 79
>gi|194033169|ref|YP_002000507.1| ribosomal protein S18 [Brachypodium distachyon]
gi|193075577|gb|ACF08660.1| ribosomal protein S18 [Brachypodium distachyon]
Length = 163
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
+ P + + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 23 NKSKQPFRKSKQTFRKSKQPFRRRPRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLT 82
Query: 59 HKKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 83 LKQQRLITLAIKQARILSFLPFRN 106
>gi|324986504|ref|YP_004276374.1| ribosomal protein S18 [Pinus nelsonii]
gi|323522692|gb|ADX94940.1| ribosomal protein S18 [Pinus nelsonii]
Length = 93
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|301167905|emb|CBW27490.1| putative 30S ribosomal protein S6 and S18 fusion [Bacteriovorax
marinus SJ]
Length = 207
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ RRKSC + D+KD + +++ GKI P R+S +S K R AIKR
Sbjct: 133 KKRFSRRKSCWFAANNITP-DWKDPKTYAWLINEFGKINPGRVSGISRKAHRLADTAIKR 191
Query: 72 ARYLGLIAYVN 82
AR +G+++++
Sbjct: 192 ARNMGVVSHIT 202
>gi|237736139|ref|ZP_04566620.1| SSU ribosomal protein S18P [Fusobacterium mortiferum ATCC 9817]
gi|229421692|gb|EEO36739.1| SSU ribosomal protein S18P [Fusobacterium mortiferum ATCC 9817]
Length = 72
Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVDLLKRFVSDKGKINPSRVTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|324986433|ref|YP_004276304.1| ribosomal protein S18 [Pinus monophylla]
gi|228016064|gb|ACP50902.1| ribosomal protein S18 [Pinus rzedowskii]
gi|323522528|gb|ADX94870.1| ribosomal protein S18 [Pinus monophylla]
Length = 93
Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|228016693|gb|ACP51521.1| ribosomal protein S18 [Pinus aristata]
Length = 93
Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|307683679|dbj|BAJ19818.1| ribosomal protein S18 [Picea morrisonicola]
Length = 93
Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
TP+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 TPIRRHLTPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLIT 74
Query: 67 KAIKRARYLGLIAYV 81
KAIKRAR L+ ++
Sbjct: 75 KAIKRARIPSLLPFL 89
>gi|257452936|ref|ZP_05618235.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|257462524|ref|ZP_05626936.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|257466684|ref|ZP_05630995.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
gi|315917837|ref|ZP_07914077.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059477|ref|ZP_07923962.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|317060179|ref|ZP_07924664.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|313685153|gb|EFS21988.1| SSU ribosomal protein S18P [Fusobacterium sp. 3_1_5R]
gi|313685855|gb|EFS22690.1| SSU ribosomal protein S18P [Fusobacterium sp. D12]
gi|313691712|gb|EFS28547.1| SSU ribosomal protein S18P [Fusobacterium gonidiaformans ATCC
25563]
Length = 72
Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVDLLKRFVSDKGKINPSRLTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTKI 70
>gi|224107573|ref|XP_002333495.1| predicted protein [Populus trichocarpa]
gi|222837064|gb|EEE75443.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKPKRSLRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|62287387|sp|Q5QA75|RR18_ACOGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|56122466|gb|AAV74358.1| Rps18 [Acorus gramineus]
Length = 101
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + + S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKQLFRKSKGSFRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILFSLPFLN 79
>gi|313681799|ref|YP_004059537.1| SSU ribosomal protein s18p [Sulfuricurvum kujiense DSM 16994]
gi|313154659|gb|ADR33337.1| SSU ribosomal protein S18P [Sulfuricurvum kujiense DSM 16994]
Length = 85
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ IDYKD+ L LS+R KI+P R++ + Q + AIK++R LI Y
Sbjct: 16 EQKVDFIDYKDVASLKYSLSERFKIMPRRLTGNCKRHQDMVTIAIKQSRAAALIPYT 72
>gi|213409251|ref|XP_002175396.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
japonicus yFS275]
gi|212003443|gb|EEB09103.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
japonicus yFS275]
Length = 159
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
R RR + P + G +DY K+ +L+ +L++ G+I ++ +S K QR+L +A
Sbjct: 87 QRNEFRQRRPADPFTALGKSPLDYWKNPVVLSEYLTELGRIKHRAVTGLSAKHQRQLTRA 146
Query: 69 IKRARYLGLIA 79
IKRAR G++
Sbjct: 147 IKRARATGVLP 157
>gi|57109098|ref|XP_535635.1| PREDICTED: similar to 28S ribosomal protein S18c, mitochondrial
precursor (MRP-S18-c) (Mrps18c) (MRP-S18-1) isoform 1
[Canis familiaris]
Length = 143
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L G R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPIPMENPYKEPLKK-CILCG---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 105 QKEITKAIKRAQIMGFMPVT 124
>gi|50955940|ref|YP_063228.1| 30S ribosomal protein S18 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|59798680|sp|Q6ABW9|RS18_LEIXX RecName: Full=30S ribosomal protein S18
gi|50952422|gb|AAT90123.1| 30S ribosomal protein S18 [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 87
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + + P IDYKD+ L +F+S+RGKI RI+ VS ++QR +A+A+K
Sbjct: 14 RKGKDGKNAAPAKSVRVGVIDYKDVATLRKFISERGKIRALRITGVSVQEQRLIARAVKN 73
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 74 AREMALLPY 82
>gi|156402582|ref|XP_001639669.1| predicted protein [Nematostella vectensis]
gi|156226799|gb|EDO47606.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAK 67
+R + R C L K IDYK++RLL++F+S G+I R++ + KKQ+E+
Sbjct: 72 MRLDEEDRPTGCLLCPKRTDVTIDYKNVRLLSQFISSHSGRIYNRRVTGLCDKKQKEITN 131
Query: 68 AIKRARYLGLIAYV 81
AIKRAR +GL+
Sbjct: 132 AIKRARAIGLMPVT 145
>gi|260780684|ref|YP_003227024.1| 30S ribosomal protein S18 [Bryopsis hypnoides]
gi|260176762|gb|ACX33771.1| 30S ribosomal protein S18 [Bryopsis hypnoides]
Length = 76
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 20 SCPLSGKGAPRID--YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+ + D YK+I LL +F+S GKI+P R++ ++ K+QR+++KAIK AR +G
Sbjct: 2 FSKFVSQKLQQQDLNYKNILLLRKFISPEGKILPRRLTGLNTKQQRKISKAIKNARIMGF 61
Query: 78 IAYVNL 83
+ ++ +
Sbjct: 62 LPFIRI 67
>gi|228017187|gb|ACP52007.1| ribosomal protein S18 [Pinus leiophylla var. chihuahuana]
Length = 100
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|297710087|ref|XP_002831737.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pongo
abelii]
Length = 141
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L G ++YK+ +LL++F+S G I I+ + KK
Sbjct: 47 EDLPTPMEN-PYKESLKKCILCG---KHVNYKNAQLLSQFVSPFTGCIYGRHITGLCGKK 102
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFMPVT 122
>gi|323149196|ref|YP_004222025.1| ribosomal protein S18 [Coccomyxa sp. C-169]
gi|317467252|gb|ADV29873.1| ribosomal protein S18 [Coccomyxa sp. C-169]
Length = 95
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK+I LL +F++ GKI+P R S ++ K+QR +A+AIK AR +GL+ ++N
Sbjct: 36 TIDYKNIVLLRKFITAEGKILPRRSSLLTAKQQRYMARAIKNARIMGLLPFIN 88
>gi|239746839|ref|XP_002344238.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
gi|310133155|ref|XP_003121079.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
Length = 141
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L G ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPMEN-PYKESLKKCVLCG---KHVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFMPVT 122
>gi|159106815|ref|YP_001531235.1| ribosomal protein S18 [Cuscuta obtusiflora]
gi|205831386|sp|A8W3K5|RR18_CUSOB RecName: Full=Plastid 30S ribosomal protein S18
gi|158142539|gb|ABW20580.1| ribosomal protein S18 [Cuscuta obtusiflora]
Length = 149
Score = 84.9 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P + S R+ P+ + RIDY++I +L RF+SQ+GKI+ R++ ++ K+QR L
Sbjct: 7 PFRKSKKSFRKPLPPI--QSGDRIDYQNIDVLRRFISQQGKILSRRVNRLTLKQQRLLNL 64
Query: 68 AIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 65 AIKQARILSFLPFTN 79
>gi|310118118|ref|XP_003120355.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Homo
sapiens]
Length = 141
Score = 84.9 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L G ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPMEN-PYKESLKKCVLCG---KHVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFMPVT 122
>gi|62859095|ref|NP_001017092.1| mitochondrial ribosomal protein S18C [Xenopus (Silurana)
tropicalis]
Length = 125
Score = 84.9 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
+ K C L G +DYK+ +LL++F+S G I I+ + +KQR ++K
Sbjct: 40 QMENPYKDPPKKCILCG---VTVDYKNTQLLSQFISPHTGHIFGRHITGLCGRKQRAVSK 96
Query: 68 AIKRARYLGLIAYV 81
AIKRA +G +
Sbjct: 97 AIKRAHIMGFMPVT 110
>gi|226533445|ref|NP_001142148.1| hypothetical protein LOC100274313 [Zea mays]
gi|194707354|gb|ACF87761.1| unknown [Zea mays]
Length = 306
Score = 84.5 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +N RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A
Sbjct: 187 KPAAAKN-PPRRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIA 245
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + +
Sbjct: 246 REIKTARAFGLMPFTTM 262
>gi|114688759|ref|XP_001146698.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Pan
troglodytes]
Length = 141
Score = 84.5 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L G ++YK+ +LL++F+S G I ++ + KK
Sbjct: 47 EDLPTPMEN-PYKESLKKCVLCG---KHVNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKK 102
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 103 QKEITKAIKRAQIMGFMPVT 122
>gi|262037248|ref|ZP_06010730.1| ribosomal protein S18 [Leptotrichia goodfellowii F0264]
gi|261748720|gb|EEY36077.1| ribosomal protein S18 [Leptotrichia goodfellowii F0264]
Length = 77
Score = 84.5 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
I+YK++ LL F++ +GKI P+R++ + K QR++AKAIKR+R + L+ Y +
Sbjct: 20 VEDINYKNVDLLKNFMNDKGKISPARVTGLEAKIQRKIAKAIKRSRQIALMPYTRI 75
>gi|262065928|ref|ZP_06025540.1| ribosomal protein S18 [Fusobacterium periodonticum ATCC 33693]
gi|291380408|gb|EFE87926.1| ribosomal protein S18 [Fusobacterium periodonticum ATCC 33693]
Length = 72
Score = 84.5 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR++AKAIKRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|51209975|ref|YP_063639.1| 30S ribosomal protein S18 [Gracilaria tenuistipitata var. liui]
gi|62287420|sp|Q6B8S1|RR18_GRATL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50657729|gb|AAT79714.1| 30S ribosomal protein S18 [Gracilaria tenuistipitata var. liui]
Length = 70
Score = 84.5 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K I+YKDI LL +F++ + KIV R + ++ K+Q++LAK+IK+AR L L+ +VN
Sbjct: 12 KPNETINYKDIDLLRKFITDQSKIVSRRSNGLTVKQQKQLAKSIKKARILALLPFVN 68
>gi|253581412|ref|ZP_04858638.1| ribosomal protein S18 [Fusobacterium varium ATCC 27725]
gi|257470800|ref|ZP_05634890.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
gi|317065004|ref|ZP_07929489.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
gi|251836776|gb|EES65310.1| ribosomal protein S18 [Fusobacterium varium ATCC 27725]
gi|313690680|gb|EFS27515.1| SSU ribosomal protein S18P [Fusobacterium ulcerans ATCC 49185]
Length = 72
Score = 84.5 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR +AKAIKRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVDLLKRFVSDKGKINPSRVTGANAKLQRRIAKAIKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|297843510|ref|XP_002889636.1| 30S ribosomal protein S18 family [Arabidopsis lyrata subsp. lyrata]
gi|297335478|gb|EFH65895.1| 30S ribosomal protein S18 family [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 84.5 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++ + KS + + D++++R L +F+++ G I+ + + +S K QR++A
Sbjct: 151 QKQMQNPRQNNNKSEVTTEEVLKNADFRNVRFLAKFITEAGIIIKRKQTGISAKAQRKIA 210
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + +
Sbjct: 211 REIKTARAFGLMPFTTM 227
>gi|229915459|gb|ACQ90804.1| ribosomal protein S18 [Oocystis solitaria]
Length = 95
Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL +FL+ GKI+P R+S ++ K+QR ++KAIK AR +G I Y+
Sbjct: 36 TIDYKNVVLLRKFLTAEGKILPRRVSGLNAKQQRYMSKAIKNARMIGFIPYI 87
>gi|168701389|ref|ZP_02733666.1| 30S ribosomal protein S18 [Gemmata obscuriglobus UQM 2246]
Length = 80
Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 LLRRNVSHRRK-SCPLSGKGA----PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ R+ + R C K +DYKD+ L + ++ +GK+V + S + QR
Sbjct: 1 MNRKKLGRSRAGRCRFCTKDGCPRPAFVDYKDVGNLKKMITGQGKLVSRKRSGLCATFQR 60
Query: 64 ELAKAIKRARYLGLIAYVN 82
E+ A+KRAR++GL+ YV
Sbjct: 61 EVGTAVKRARFMGLLPYVG 79
>gi|89266949|emb|CAJ83647.1| novel protein similar to mitochondrial ribosomal protein S18C
[Xenopus (Silurana) tropicalis]
Length = 131
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
+ K C L G +DYK+ +LL++F+S G I I+ + +KQR ++K
Sbjct: 46 QMENPYKDPPKKCILCG---VTVDYKNTQLLSQFISPHTGHIFGRHITGLCGRKQRAVSK 102
Query: 68 AIKRARYLGLIAYV 81
AIKRA +G +
Sbjct: 103 AIKRAHIMGFMPVT 116
>gi|139388932|ref|YP_001123659.1| ribosomal protein S18 [Lepidium virginicum]
gi|205831398|sp|A4QLC8|RR18_LEPVR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134286862|dbj|BAF50483.1| ribosomal protein S18 [Lepidium virginicum]
Length = 101
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ + RIDY+++ L++RF+S++GKI+ R++ V+ K+QR + A
Sbjct: 8 FTKSKRSFRRRLPPI--QSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
I +AR L L+ ++N
Sbjct: 66 INQARILSLLPFLN 79
>gi|307128656|ref|YP_003880686.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri CARI]
gi|306483118|gb|ADM89988.1| 30S ribosomal protein S18 [Candidatus Sulcia muelleri CARI]
Length = 393
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ ++K C +D+K+ L +FL++R +I+P RI+ S K QR++ A+KR
Sbjct: 319 KLKEKKKYCFFKKANIGYVDFKNPLFLIKFLNERAEILPRRITGTSKKFQRKIKIAVKRC 378
Query: 73 RYLGLIAYVN 82
+ +GL+ Y+
Sbjct: 379 KQIGLLPYLT 388
>gi|108796929|ref|YP_636229.1| ribosomal protein S18 [Pseudendoclonium akinetum]
gi|122227092|sp|Q3ZJ38|RR18_PSEAK RecName: Full=30S ribosomal protein S18, chloroplastic
gi|56159627|gb|AAV80651.1| ribosomal protein S18 [Pseudendoclonium akinetum]
Length = 85
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 38/53 (71%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK++ LL +++S GKI+ R++ ++ K+QR ++ AIK AR GL+ ++N
Sbjct: 32 TVDYKNVALLRKYISAEGKILSRRLTRLTSKQQRHISTAIKTARIAGLLPFIN 84
>gi|149390376|ref|YP_001294374.1| ribosomal protein S18 [Dioscorea elephantipes]
gi|205831389|sp|A6MMM9|RR18_DIOEL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148668068|gb|ABR01452.1| ribosomal protein S18 [Dioscorea elephantipes]
Length = 101
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 42/56 (75%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+I+Y+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L L+ ++N
Sbjct: 24 SGDQINYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 79
>gi|290487252|gb|ADD30010.1| ribosomal protein S18 [Phoradendron serotinum]
Length = 93
Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + P + R+ P+ + RIDY+++ L++RF+S++GKI R++ ++ K+Q
Sbjct: 2 DKSKRPFRKSTRYFHRRLIPI--QSGDRIDYRNMSLISRFISEQGKIFSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIK+AR L L+ ++
Sbjct: 60 RFITIAIKQARILSLLPFL 78
>gi|237688525|ref|YP_002905143.1| ribosomal protein S18 [Pinus contorta]
gi|226875354|gb|ACO89092.1| ribosomal protein S18 [Pinus contorta]
Length = 100
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|296196117|ref|XP_002745690.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Callithrix jacchus]
Length = 144
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L G R+DYK+++LL++F+S G I I+ + KK
Sbjct: 50 EDLPIPMENPYKEPLKK-CILCG---KRVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKK 105
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ LG +
Sbjct: 106 QKEITKAIKRAQILGFMPVT 125
>gi|15222340|ref|NP_172201.1| 30S ribosomal protein S18 family [Arabidopsis thaliana]
gi|8954025|gb|AAF82199.1|AC067971_7 Contains similarity to a ribosomal protein S18 - Chlamydomonas
reinhardtii chloroplast (fragment) from Chlamydomonas
reinhardtii gb|Y16473. It contains a ribosomal protein
S18 domain PF|01084. EST gb|AI997380 comes from this
gene [Arabidopsis thaliana]
gi|12083224|gb|AAG48771.1|AF332408_1 unknown protein [Arabidopsis thaliana]
gi|110737014|dbj|BAF00462.1| hypothetical protein [Arabidopsis thaliana]
gi|332189972|gb|AEE28093.1| Ribosomal protein S18 [Arabidopsis thaliana]
Length = 261
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 4 VAPTPLLRRNVSHRR----KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ P +++ + + R KS + + D++++R L F+++ G I+ + + +S
Sbjct: 144 MNNFPRMQKQMQNPRQNNSKSEVTTEEVLKNADFRNVRFLANFITEAGIIIKRKQTGISA 203
Query: 60 KKQRELAKAIKRARYLGLIAYVNL 83
K QR++A+ IK AR GL+ + +
Sbjct: 204 KAQRKIAREIKTARAFGLMPFTTM 227
>gi|19704977|ref|NP_602472.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|34763885|ref|ZP_00144789.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237742686|ref|ZP_04573167.1| SSU ribosomal protein S18P [Fusobacterium sp. 4_1_13]
gi|237743347|ref|ZP_04573828.1| SSU ribosomal protein S18P [Fusobacterium sp. 7_1]
gi|256028465|ref|ZP_05442299.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|256846081|ref|ZP_05551539.1| ribosomal protein S18 [Fusobacterium sp. 3_1_36A2]
gi|260495033|ref|ZP_05815162.1| ribosomal protein S18 [Fusobacterium sp. 3_1_33]
gi|289766386|ref|ZP_06525764.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|294784789|ref|ZP_06750077.1| ribosomal protein S18 [Fusobacterium sp. 3_1_27]
gi|296329232|ref|ZP_06871733.1| 30S ribosomal protein S18 [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|22257028|sp|Q8RIE4|RS18_FUSNN RecName: Full=30S ribosomal protein S18
gi|19712881|gb|AAL93771.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|27886348|gb|EAA23619.1| SSU ribosomal protein S18P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229430334|gb|EEO40546.1| SSU ribosomal protein S18P [Fusobacterium sp. 4_1_13]
gi|229433126|gb|EEO43338.1| SSU ribosomal protein S18P [Fusobacterium sp. 7_1]
gi|256719640|gb|EEU33195.1| ribosomal protein S18 [Fusobacterium sp. 3_1_36A2]
gi|260197476|gb|EEW94994.1| ribosomal protein S18 [Fusobacterium sp. 3_1_33]
gi|289717941|gb|EFD81953.1| SSU ribosomal protein S18P [Fusobacterium sp. D11]
gi|294486503|gb|EFG33865.1| ribosomal protein S18 [Fusobacterium sp. 3_1_27]
gi|296153588|gb|EFG94405.1| 30S ribosomal protein S18 [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 72
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR++AKA+KRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAVKRARN 61
Query: 75 LGLIAYV 81
+ LI Y
Sbjct: 62 IALIPYT 68
>gi|157822015|ref|NP_001099466.1| 28S ribosomal protein S18c, mitochondrial [Rattus norvegicus]
gi|149046775|gb|EDL99549.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 143
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPIPMENPYKEPLKK-CVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ +G +
Sbjct: 105 QKEVTKAIKRAQKMGFMPVT 124
>gi|1350882|sp|P49170|RR18_SECCE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1054841|emb|CAA57883.1| chloroplast ribosomal protein S18 [Secale cereale]
Length = 170
Score = 83.8 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 40 KQPFRKSKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 96
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 97 TLAIKQARILSFLPFRN 113
>gi|237739060|ref|ZP_04569541.1| SSU ribosomal protein S18P [Fusobacterium sp. 2_1_31]
gi|254303426|ref|ZP_04970784.1| ribosomal protein S18 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|294783934|ref|ZP_06749256.1| ribosomal protein S18 [Fusobacterium sp. 1_1_41FAA]
gi|148323618|gb|EDK88868.1| ribosomal protein S18 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|229423660|gb|EEO38707.1| SSU ribosomal protein S18P [Fusobacterium sp. 2_1_31]
gi|294479746|gb|EFG27525.1| ribosomal protein S18 [Fusobacterium sp. 1_1_41FAA]
Length = 72
Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RR+ L A IDYK++ LL RF+S +GKI PSR++ + K QR++AKA+KRAR
Sbjct: 3 EFRRRRAKLRV-KAEEIDYKNVELLKRFVSDKGKINPSRLTGANAKLQRKIAKAVKRARN 61
Query: 75 LGLIAYVNL 83
+ LI Y +
Sbjct: 62 IALIPYTRI 70
>gi|110227101|ref|YP_665580.1| ribosomal protein S18 [Populus alba]
gi|134093222|ref|YP_001109524.1| ribosomal protein S18 [Populus trichocarpa]
gi|122230953|sp|Q14FD5|RR18_POPAL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831410|sp|A4GYT3|RR18_POPTR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|109945539|dbj|BAE97227.1| ribosomal protein S18 [Populus alba]
gi|133712084|gb|ABO36727.1| ribosomal protein S18 [Populus trichocarpa]
Length = 101
Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ RIDY+++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKPKRSLRRRLPPI--GSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|257042731|gb|ACV32998.1| ribosomal protein S18 [Pinus monticola]
Length = 93
Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ ++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSXISRFISEQGKILSGRVNRLTSKQQRLMT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|193214370|ref|YP_001995569.1| 30S ribosomal protein S18 [Chloroherpeton thalassium ATCC 35110]
gi|193087847|gb|ACF13122.1| ribosomal protein S18 [Chloroherpeton thalassium ATCC 35110]
Length = 90
Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R + ++K DY+D R L RF++++GKI+P RI+ +S K+QR L
Sbjct: 14 RPVQRVAQNAKKKQVR---NQVVFFDYRDDRKLRRFINEQGKIIPRRITGLSAKEQRLLT 70
Query: 67 KAIKRARYLGLIAYVN 82
K+IK AR+L +I +V+
Sbjct: 71 KSIKWARHLAIIPFVS 86
>gi|26353262|dbj|BAC40261.1| unnamed protein product [Mus musculus]
gi|148688326|gb|EDL20273.1| mitochondrial ribosomal protein S18C, isoform CRA_a [Mus musculus]
Length = 128
Score = 83.4 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ +K C L R+DYK+++LL++F+S G I I+ + KK
Sbjct: 49 EDLPVPMENPYKEPLKK-CVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKK 104
Query: 62 QRELAKAIKRARYLG 76
QRE+ KAIKRA+ +G
Sbjct: 105 QREITKAIKRAQKMG 119
>gi|224510695|pdb|3FIC|R Chain R, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
gi|300508622|pdb|3MR8|R Chain R, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3ms1. Molecule B In The Same Asymmetric Unit Is
Deposited As 3mrz (50s) And 3ms0 (30s).
gi|300508677|pdb|3MS0|R Chain R, Recognition Of The Amber Stop Codon By Release Factor
Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
3mrz. Molecule A In The Same Asymmetric Unit Is
Deposited As 3mr8 (30s) And 3ms1 (50s).
gi|322812567|pdb|3PYN|R Chain R, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s
Ribosome.
gi|322812620|pdb|3PYQ|R Chain R, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812673|pdb|3PYS|R Chain R, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812726|pdb|3PYU|R Chain R, Crystal Structure Of A Complex Containing Domain 3 Of
Crpv Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 70
Score = 83.4 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 15 DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE 65
>gi|304322971|ref|YP_003795507.1| ribosomal protein S18 [Floydiella terrestris]
gi|270048170|gb|ACZ58465.1| ribosomal protein S18 [Floydiella terrestris]
Length = 231
Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK+ LL ++S GKI+P R + ++ K+QR L KAIK AR L L+ +V
Sbjct: 171 KFVDYKNRSLLQEYISFDGKILPRRKTGITTKQQRYLTKAIKTARILCLLPFV 223
>gi|118430409|ref|YP_874674.1| ribosomal protein S18 [Hordeum vulgare subsp. vulgare]
gi|205831393|sp|A1E9L2|RR18_HORVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201063|gb|ABK79434.1| ribosomal protein S18 [Hordeum vulgare subsp. vulgare]
Length = 170
Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 40 KQPFRKSKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 96
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 97 TLAIKQARILSFLPFRN 113
>gi|115605044|ref|YP_784495.1| ribosomal protein S18 [Piper cenocladum]
gi|122164340|sp|Q06GN8|RR18_PIPCE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112253773|gb|ABI14494.1| ribosomal protein S18 [Piper cenocladum]
Length = 102
Score = 83.4 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 25 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 80
>gi|269991275|emb|CAX12453.1| 30S ribosomal protein S18 [Fucus vesiculosus]
Length = 73
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 23 LSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K RIDYK + +L FL++ GKI P R ++++ K+QR+L+KAIK AR L L+ +V
Sbjct: 10 YKIKSNERIDYKQVDILLSFLTEHGKIKPRRSTNLTLKQQRQLSKAIKTARSLNLLPFVT 69
>gi|196009376|ref|XP_002114553.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
gi|190582615|gb|EDV22687.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
Length = 113
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L IDYK++RLL++F+S G I RI+ + KQ+EL KAI+RAR +G +
Sbjct: 42 CALCKIK---IDYKNVRLLSQFISNDTGMIYGRRITGLCGHKQKELTKAIRRARTMGFMP 98
Query: 80 YV 81
Y
Sbjct: 99 YT 100
>gi|195620404|gb|ACG32032.1| ribosomal protein S18 containing protein [Zea mays]
Length = 290
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +N RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A
Sbjct: 171 KPAAAKN-PPRRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIA 229
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + +
Sbjct: 230 REIKTARAFGLMPFTTM 246
>gi|75755680|ref|YP_319786.1| ribosomal protein S18 [Acorus calamus]
gi|161622331|ref|YP_001586203.1| ribosomal protein S18 [Acorus americanus]
gi|122227061|sp|Q3V513|RR18_ACOCL RecName: Full=Chloroplast 30S ribosomal protein S18
gi|69216265|gb|AAZ03913.1| ribosomal protein S18 [Acorus americanus]
gi|74381730|emb|CAI53815.1| ribosomal protein S18 [Acorus calamus]
gi|160369874|gb|ABX38765.1| ribosomal protein S18 [Acorus americanus]
Length = 101
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|78188079|ref|YP_378417.1| 30S ribosomal protein S18 [Chlorobium chlorochromatii CaD3]
gi|123743406|sp|Q3ANR3|RS18_CHLCH RecName: Full=30S ribosomal protein S18
gi|78170278|gb|ABB27374.1| SSU ribosomal protein S18P [Chlorobium chlorochromatii CaD3]
Length = 92
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR
Sbjct: 23 LTSKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWAR 79
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 80 FLAVIPYV 87
>gi|297745890|emb|CBI15946.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R + + + + D++++R L F+++ G I+ + +S K QR++A+ IK
Sbjct: 212 RKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKTGISAKAQRKVAREIKT 271
Query: 72 ARYLGLIAYVNL 83
AR GL+ + +
Sbjct: 272 ARAFGLMPFTTM 283
>gi|228015927|gb|ACP50767.1| ribosomal protein S18 [Pinus ponderosa]
Length = 100
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|118614514|ref|YP_899429.1| ribosomal protein S18 [Sorghum bicolor]
gi|125987697|sp|A1E9U6|RR18_SORBI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201148|gb|ABK79518.1| ribosomal protein S18 [Sorghum bicolor]
Length = 163
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ P + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 24 KSKQPFRKFKQPFRKSKQPFRRRSRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTL 83
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 84 KQQRLITVAIKQARILSFLPFRN 106
>gi|228016447|gb|ACP51279.1| ribosomal protein S18 [Pinus torreyana subsp. insularis]
gi|228016511|gb|ACP51342.1| ribosomal protein S18 [Pinus torreyana subsp. torreyana]
Length = 100
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|228016309|gb|ACP51143.1| ribosomal protein S18 [Pinus taeda]
Length = 100
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|194335288|ref|YP_002017082.1| ribosomal protein S18 [Pelodictyon phaeoclathratiforme BU-1]
gi|194307765|gb|ACF42465.1| ribosomal protein S18 [Pelodictyon phaeoclathratiforme BU-1]
Length = 92
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR
Sbjct: 23 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWAR 79
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 80 FLAVIPYV 87
>gi|253729578|ref|YP_003029761.1| ribosomal protein S18 [Bambusa oldhamii]
gi|255961404|ref|YP_003097597.1| ribosomal protein S18 [Dendrocalamus latiflorus]
gi|246367088|gb|ACS94699.1| ribosomal protein S18 [Bambusa oldhamii]
gi|255040281|gb|ACT99941.1| ribosomal protein S18 [Dendrocalamus latiflorus]
Length = 170
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + RR+ IDY+++ L+NRF+S++GKI+ RI+ ++ K+Q
Sbjct: 37 RKSKQPFRKSKQPFRRRP---RIGPGDPIDYRNMSLINRFISEQGKILSRRINRLTLKQQ 93
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + + N
Sbjct: 94 RLITLAIKQARILSFLPFRN 113
>gi|228016822|gb|ACP51648.1| ribosomal protein S18 [Pinus attenuata]
gi|228016946|gb|ACP51770.1| ribosomal protein S18 [Pinus banksiana]
Length = 100
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|242910206|ref|YP_002970666.1| ribosomal protein S18 [Alsophila spinulosa]
gi|218454875|gb|ACK77212.1| ribosomal protein S18 [Alsophila spinulosa]
Length = 75
Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDY++ LL RF+S++G+I+ R++ ++ K+QR +A AIKRAR L+ + N
Sbjct: 19 EIIDYRNTTLLRRFVSEQGRILSRRMNRLTSKQQRSVAVAIKRARIPALLPFSN 72
>gi|164597828|ref|NP_084714.2| ribosomal protein S18 [Oenothera elata subsp. hookeri]
gi|169142967|ref|YP_001687389.1| ribosomal protein S18 [Oenothera biennis]
gi|172045754|sp|Q9MTK1|RR18_OENEH RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831404|sp|B0Z4Y2|RR18_OENBI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159793140|gb|ABW98894.1| ribosomal protein S18 [Oenothera biennis]
gi|162423695|emb|CAB67179.2| ribosomal protein S18 [Oenothera elata subsp. hookeri]
Length = 101
Score = 82.6 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAY 80
R + AIK+AR L L+ +
Sbjct: 60 RLITIAIKQARILSLLPF 77
>gi|118430324|ref|YP_874758.1| ribosomal protein S18 [Agrostis stolonifera]
gi|125987694|sp|A1EA30|RR18_AGRST RecName: Full=30S ribosomal protein S18, chloroplastic
gi|118201233|gb|ABK79602.1| ribosomal protein S18 [Agrostis stolonifera]
Length = 169
Score = 82.6 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 40 KQPFRKSKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 96
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 97 TLAIKQARILSFLPFRN 113
>gi|302143651|emb|CBI22404.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 82.6 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 153 TSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 199
>gi|146216938|ref|NP_042387.2| ribosomal protein S18 [Pinus thunbergii]
gi|62297524|sp|P52763|RR18_PINTH RecName: Full=30S ribosomal protein S18, chloroplastic
Length = 96
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 20 KPIRRYLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 77
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 78 NAIKRARILSLLPFL 92
>gi|11466961|ref|NP_054382.1| ribosomal protein S18 [Epifagus virginiana]
gi|266967|sp|P30061|RR18_EPIVI RecName: Full=Plastid 30S ribosomal protein S18
gi|336930|gb|AAA65856.1| ribosomal protein S18 [Epifagus virginiana]
Length = 92
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ Y+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MYKFKRSFRRRLSPIGSGNLIY--YRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIA 58
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 59 IKQARILSLLPFIN 72
>gi|1262627|dbj|BAA04344.1| ribosomal protein S18 [Pinus thunbergii]
Length = 100
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRYLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|110598896|ref|ZP_01387145.1| ribosomal protein S18 [Chlorobium ferrooxidans DSM 13031]
gi|110339487|gb|EAT58013.1| ribosomal protein S18 [Chlorobium ferrooxidans DSM 13031]
Length = 92
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR
Sbjct: 23 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWAR 79
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 80 FLAVIPYV 87
>gi|50233994|ref|YP_052772.1| ribosomal protein S18 [Oryza nivara]
gi|109156610|ref|YP_654229.1| ribosomal protein S18 [Oryza sativa Indica Group]
gi|62287427|sp|Q6ENF1|RR18_ORYNI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840848|sp|P0C475|RR18_ORYSA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840851|sp|P0C476|RR18_ORYSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148840852|sp|P0C477|RR18_ORYSJ RecName: Full=30S ribosomal protein S18, chloroplastic
gi|42795502|gb|AAS46069.1| ribosomal protein S18 [Oryza sativa Indica Group]
gi|42795569|gb|AAS46135.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|42795633|gb|AAS46198.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|49615018|dbj|BAD26801.1| ribosomal protein S18 [Oryza nivara]
gi|290790589|gb|ADD62849.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|290790658|gb|ADD62917.1| ribosomal protein S18 [Oryza meridionalis]
Length = 163
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 33 KQPFRKPKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 89
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 90 TLAIKQARILSFLPFRN 106
>gi|228015996|gb|ACP50835.1| ribosomal protein S18 [Pinus resinosa]
gi|228016380|gb|ACP51213.1| ribosomal protein S18 [Pinus thunbergii]
gi|228017010|gb|ACP51833.1| ribosomal protein S18 [Pinus canariensis]
gi|228017449|gb|ACP52265.1| ribosomal protein S18 [Pinus merkusii]
gi|228017702|gb|ACP52514.1| ribosomal protein S18 [Pinus pinaster]
Length = 100
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+QR +
Sbjct: 24 KPIRRYLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQRLMT 81
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 82 NAIKRARILSLLPFL 96
>gi|21674942|ref|NP_663007.1| 30S ribosomal protein S18 [Chlorobium tepidum TLS]
gi|25009175|sp|Q8KAM3|RS18_CHLTE RecName: Full=30S ribosomal protein S18
gi|21648172|gb|AAM73349.1| ribosomal protein S18 [Chlorobium tepidum TLS]
Length = 74
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L +IK AR
Sbjct: 5 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQSLLTHSIKWAR 61
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 62 FLAIIPYV 69
>gi|60117173|ref|YP_209507.1| ribosomal protein S18 [Huperzia lucidula]
gi|62287393|sp|Q5SD37|RR18_HUPLU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|50659981|gb|AAT80703.1| ribosomal protein S18 [Huperzia lucidula]
Length = 81
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + I+Y++I LL RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 1 MNKSKRSFRRRLPPI--RSGETINYRNISLLRRFISEQGKILSRRMNRLTSKQQRLITVA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR ++N
Sbjct: 59 IKRARISAPSPFLN 72
>gi|290790727|gb|ADD62985.1| ribosomal protein S18 [Oryza australiensis]
Length = 163
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 33 KQPFRKPKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 89
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 90 TLAIKQARILSFLPFRN 106
>gi|114593894|ref|XP_001135728.1| PREDICTED: mitochondrial ribosomal protein S18C isoform 1 [Pan
troglodytes]
Length = 125
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 63 KKCILCG---KHVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGK 119
Query: 78 IAYVN 82
Y+N
Sbjct: 120 KEYLN 124
>gi|169142882|ref|YP_001687305.1| ribosomal protein S18 [Oenothera glazioviana]
gi|205831405|sp|B0Z566|RR18_OENGL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159895494|gb|ABX10059.1| ribosomal protein S18 [Oenothera glazioviana]
Length = 97
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAY 80
R + AIK+AR L L+ +
Sbjct: 60 RLITIAIKQARILSLLPF 77
>gi|11466812|ref|NP_039408.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|12009|emb|CAA33970.1| ribosomal protein S18 [Oryza sativa Japonica Group]
gi|226631|prf||1603356BE ribosomal protein S18
Length = 163
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 33 KQPFRKPKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 89
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 90 TLAIKQARILSFLPFRN 106
>gi|291296158|ref|YP_003507556.1| 30S ribosomal protein S18 [Meiothermus ruber DSM 1279]
gi|290471117|gb|ADD28536.1| ribosomal protein S18 [Meiothermus ruber DSM 1279]
Length = 92
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
D+K++ +L RFLS+ GKI+P R + ++ ++QR+LA+ IKRAR LGL+ +
Sbjct: 37 DFKNVEVLRRFLSETGKILPRRRTGLNAQEQRKLARTIKRARMLGLLPFTE 87
>gi|109074224|ref|XP_001104605.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Macaca
mulatta]
Length = 144
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ LG
Sbjct: 65 KKCILCG---KRVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGF 121
Query: 78 IAYV 81
+
Sbjct: 122 MPVT 125
>gi|114107068|ref|YP_740224.1| ribosomal protein S18 [Liriodendron tulipifera]
gi|122239941|sp|Q0G9J7|RR18_LIRTU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113201016|gb|ABI32531.1| ribosomal protein S18 [Liriodendron tulipifera]
Length = 101
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+++F+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISQFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|78103272|ref|YP_358600.1| ribosomal protein S18 [Phalaenopsis aphrodite subsp. formosana]
gi|122239293|sp|Q3BAL8|RR18_PHAAO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|58802802|gb|AAW82522.1| ribosomal protein S18 [Phalaenopsis aphrodite subsp. formosana]
Length = 101
Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+IDY+++ L++RFLS++GKI+ R + ++ K+QR + AIK+AR L L+ + N
Sbjct: 24 SGDQIDYRNMSLISRFLSEQGKILSRRTNRLTLKQQRLITIAIKQARILSLLPFRN 79
>gi|115604956|ref|YP_784408.1| ribosomal protein S18 [Drimys granadensis]
gi|122164419|sp|Q06GX5|RR18_DRIGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112032684|gb|ABH88319.1| ribosomal protein S18 [Drimys granadensis]
Length = 101
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|11467213|ref|NP_043046.1| ribosomal protein S18 [Zea mays]
gi|133837|sp|P25459|RR18_MAIZE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|12450|emb|CAA39996.1| chloroplast ribosomal protein S18 [Zea mays]
gi|902243|emb|CAA60307.1| ribosomal protein S18 [Zea mays]
Length = 170
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + RR+S RIDY+++ L+NRF+S++GKI+ RI+ ++ K+Q
Sbjct: 37 RKSKQPFRKSKQPFRRRS---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQ 93
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + + N
Sbjct: 94 RLITLAIKQARILSFLPFRN 113
>gi|269101121|ref|YP_003289269.1| 30S ribosomal protein S18 [Ectocarpus siliculosus]
gi|266631629|emb|CAV31300.1| Chloroplast 30S ribosomal protein S18 [Ectocarpus siliculosus]
gi|270118759|emb|CAT18850.1| Chloroplast 30S ribosomal protein S18 [Ectocarpus siliculosus]
Length = 107
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 12 RNVSHRRKSC--PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ +++K P K IDYK + +L F ++ GKI R ++++ K+QR+L+K+I
Sbjct: 31 RSKDNKKKVRRQPFKLKPTATIDYKQVDILLAFSTEHGKIKSRRSTNLTLKQQRQLSKSI 90
Query: 70 KRARYLGLIAYVN 82
KRARYL L+ +V
Sbjct: 91 KRARYLHLLPFVT 103
>gi|14017593|ref|NP_114280.1| ribosomal protein S18 [Triticum aestivum]
gi|20978710|sp|Q95H55|RR18_WHEAT RecName: Full=30S ribosomal protein S18, chloroplastic
gi|13928226|dbj|BAB47055.1| ribosomal protein S18 [Triticum aestivum]
Length = 170
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 40 KQPFRKSKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 96
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 97 TLAIKQARILSFLPFRN 113
>gi|170784748|ref|YP_001718664.1| ribosomal protein S18 [Trachelium caeruleum]
gi|156598824|gb|ABU85665.1| ribosomal protein S18 [Trachelium caeruleum]
gi|157267496|gb|ABV26489.1| ribosomal protein S18 [Trachelium caeruleum]
Length = 111
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + S RR+ P+ + RIDY++I LL RF+S +GKI+ R + V+ K+QR +
Sbjct: 13 QRPFHKSKRSFRRRLPPI--QPGDRIDYRNISLLCRFISDQGKILSRRRNKVTLKQQRLI 70
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + ++N
Sbjct: 71 TIAIKQARILSSLPFIN 87
>gi|159106885|ref|YP_001531304.1| ribosomal protein S18 [Lolium perenne]
gi|205831400|sp|A8Y9A8|RR18_LOLPR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|158934419|emb|CAO85997.1| ribosomal protein S18 [Lolium perenne]
Length = 156
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
+ P + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 23 RKSKQPFRKFKKPFRKSKQPFRRRPRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLT 82
Query: 59 HKKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 83 LKQQRLITLAIKQARILSFLPFRN 106
>gi|260677440|ref|YP_003208208.1| ribosomal protein S18 [Coix lacryma-jobi]
gi|209361378|gb|ACI43293.1| ribosomal protein S18 [Coix lacryma-jobi]
Length = 163
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ P + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 24 KSKQPFRKFKQPFRKSKQPFRRRSRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTL 83
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 84 KQQRLITLAIKQARILSFLPFRN 106
>gi|48478791|ref|YP_024399.1| ribosomal protein S18 [Saccharum hybrid cultivar SP-80-3280]
gi|50812549|ref|YP_054652.1| ribosomal protein S18 [Saccharum officinarum]
gi|62287431|sp|Q6ENU2|RR18_SACOF RecName: Full=30S ribosomal protein S18, chloroplastic
gi|75291220|sp|Q6L379|RR18_SACHY RecName: Full=30S ribosomal protein S18, chloroplastic
gi|48478693|gb|AAT44713.1| ribosomal protein S18 [Saccharum hybrid cultivar SP80-3280]
gi|49659533|dbj|BAD27314.1| ribosomal protein S18 [Saccharum hybrid cultivar NCo 310]
Length = 163
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ P + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 24 KSKQPFRKFKQPFRKSKQPFRRRSRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTL 83
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 84 KQQRLITLAIKQARILSFLPFRN 106
>gi|114329678|ref|YP_740497.1| ribosomal protein S18 [Citrus sinensis]
gi|122166161|sp|Q09MF6|RR18_CITSI RecName: Full=30S ribosomal protein S18, chloroplastic
gi|113952644|gb|ABI49042.1| ribosomal protein S18 [Citrus sinensis]
Length = 101
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ L+ S RR+ P+ + RIDY+++ L++RFLS++GKI+ R++ ++ K+Q
Sbjct: 2 DKTKRLFLKSKRSFRRRLPPI--QSGDRIDYRNMTLISRFLSEQGKILSRRVNRLTLKEQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 60 RLITIAIKQARILSSLPFLN 79
>gi|119358278|ref|YP_912922.1| 30S ribosomal protein S18 [Chlorobium phaeobacteroides DSM 266]
gi|205557903|sp|A1BJC1|RS18_CHLPD RecName: Full=30S ribosomal protein S18
gi|119355627|gb|ABL66498.1| SSU ribosomal protein S18P [Chlorobium phaeobacteroides DSM 266]
Length = 87
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR
Sbjct: 18 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWAR 74
Query: 74 YLGLIAYVN 82
+L +I YV
Sbjct: 75 FLAVIPYVT 83
>gi|194333006|ref|YP_002014866.1| 30S ribosomal protein S18 [Prosthecochloris aestuarii DSM 271]
gi|194310824|gb|ACF45219.1| ribosomal protein S18 [Prosthecochloris aestuarii DSM 271]
Length = 78
Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR
Sbjct: 9 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWAR 65
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 66 FLAIIPYV 73
>gi|46200044|ref|YP_005711.1| 30S ribosomal protein S18 [Thermus thermophilus HB27]
gi|55980212|ref|YP_143509.1| 30S ribosomal protein S18 [Thermus thermophilus HB8]
gi|50401372|sp|P62659|RS18_THET2 RecName: Full=30S ribosomal protein S18
gi|62900938|sp|Q5SLQ0|RS18_THET8 RecName: Full=30S ribosomal protein S18
gi|116668214|pdb|2J00|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of
4). This File Contains The 30s Subunit, Mrna, A-, P-
And E-Site Trnas And Paromomycin For Molecule I.
gi|116668275|pdb|2J02|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|149242725|pdb|2OW8|SS Chain s, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243635|pdb|2UU9|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243662|pdb|2UUA|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243689|pdb|2UUB|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243716|pdb|2UUC|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243855|pdb|2UXC|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Ucgu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836425|pdb|2UXB|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Gggu In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|157836502|pdb|2V46|R Chain R, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836558|pdb|2V48|R Chain R, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe
And Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430917|pdb|2UXD|R Chain R, Crystal Structure Of An Extended Trna Anticodon Stem
Loop In Complex With Its Cognate Mrna Cggg In The
Context Of The Thermus Thermophilus 30s Subunit.
gi|160285956|pdb|2QNH|SS Chain s, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|209156513|pdb|3D5A|R Chain R, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156569|pdb|3D5C|R Chain R, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938836|pdb|2JL5|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4).
This File Contains The 30s Subunit.
gi|211938894|pdb|2JL7|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4).
This File Contains The 30s Subunit.
gi|218766790|pdb|3F1E|R Chain R, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766846|pdb|3F1G|R Chain R, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887391|pdb|2WDG|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887416|pdb|2WDH|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887505|pdb|2WDK|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887562|pdb|2WDM|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823546|pdb|2WH1|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome
gi|237823605|pdb|2WH3|R Chain R, Insights Into Translational Termination From The
Structure Of Rf2 Bound To The Ribosome). This File
Contains The 30s Subunit.
gi|260100003|pdb|3HUW|R Chain R, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule I.
gi|260100059|pdb|3HUY|R Chain R, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P
For Molecule Ii.
gi|261824501|pdb|2WRI|R Chain R, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of
4).
gi|261824563|pdb|2WRK|R Chain R, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of
4).
gi|261824625|pdb|2WRN|R Chain R, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824684|pdb|2WRQ|R Chain R, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307184|pdb|3KIQ|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307242|pdb|3KIS|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307300|pdb|3KIU|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307358|pdb|3KIX|RR Chain r, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965621|pdb|3KNH|R Chain R, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526699|pdb|3KNJ|R Chain R, The Structures Of Viomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii'
gi|289526724|pdb|3KNL|R Chain R, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526749|pdb|3KNN|R Chain R, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979521|pdb|3I8G|U Chain U, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979546|pdb|3I8H|U Chain U, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979605|pdb|3I9B|U Chain U, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule
B. The 50s Subunit Can Be Found In Pdb Entry 3i9c.
Molecule A In The S Asymmetric Unit Is Deposited As
3i9d (30s) And 3i9e (50s)
gi|294979659|pdb|3I9D|U Chain U, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule
A. The 50s Subunit Can Be Found In Pdb Entry 3i9e.
Molecule B In The S Asymmetric Unit Is Deposited As
3i9b (30s) And 3i9c (50s)
gi|295982092|pdb|2X9R|R Chain R, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982151|pdb|2X9T|R Chain R, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567979|pdb|2XFZ|R Chain R, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568037|pdb|2XG1|R Chain R, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|309320252|pdb|3OGE|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320273|pdb|3OGY|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320354|pdb|3OHC|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320375|pdb|3OHD|R Chain R, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320456|pdb|3OHY|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320507|pdb|3OI0|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320558|pdb|3OI2|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320609|pdb|3OI4|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207690|pdb|2XQD|R Chain R, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The
70s Ribosome With A Gtp Analog
gi|313754016|pdb|2XSY|R Chain R, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754131|pdb|2XUY|R Chain R, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533419|pdb|2Y0U|R Chain R, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533478|pdb|2Y0W|R Chain R, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533537|pdb|2Y0Y|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533596|pdb|2Y10|R Chain R, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533655|pdb|2Y12|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Near-Cognate Codon On The 70s Ribosome
gi|325533714|pdb|2Y14|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533773|pdb|2Y16|R Chain R, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound
To A Cognate Codon On The 70s Ribosome.
gi|325533832|pdb|2Y18|R Chain R, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|46197672|gb|AAS82084.1| SSU ribosomal protein S18P [Thermus thermophilus HB27]
gi|55771625|dbj|BAD70066.1| 30S ribosomal protein S18 [Thermus thermophilus HB8]
Length = 88
Score = 81.8 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +R S + K + DY+++ +L RFLS+ GKI+P R + +S K+QR L
Sbjct: 8 PKKEAQRRPSRKAKV-KATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRIL 66
Query: 66 AKAIKRARYLGLIAYVN 82
AK IKRAR LGL+ +
Sbjct: 67 AKTIKRARILGLLPFTE 83
>gi|205620396|sp|Q7UFN3|RS18_RHOBA RecName: Full=30S ribosomal protein S18
Length = 87
Score = 81.8 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 34 YVDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 86
>gi|290487264|gb|ADD30016.1| ribosomal protein S18 [Euonymus americanus]
Length = 108
Score = 81.8 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ S RR+ P+ RI Y+++ L++RF+S++GKI+ R++ ++ K+QR + A
Sbjct: 8 FHKSKRSLRRRLPPIK--SGDRIAYRNMSLISRFISEQGKILSKRVNRLTLKQQRLITIA 65
Query: 69 IKRARYLGLIAYVN 82
IK+AR L L+ ++N
Sbjct: 66 IKQARILSLLPFLN 79
>gi|149390464|ref|YP_001294292.1| ribosomal protein S18 [Illicium oligandrum]
gi|205831394|sp|A6MMW6|RR18_ILLOL RecName: Full=30S ribosomal protein S18, chloroplastic
gi|147917417|gb|ABQ52541.1| ribosomal protein S18 [Illicium oligandrum]
Length = 108
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|159161182|ref|YP_001542469.1| ribosomal protein S18 [Ceratophyllum demersum]
gi|205831421|sp|A8SEC5|RR18_CERDE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|148508465|gb|ABQ81472.1| ribosomal protein S18 [Ceratophyllum demersum]
gi|227481141|emb|CAP62520.1| ribosomal protein S18 [Ceratophyllum demersum]
Length = 101
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|32480865|ref|NP_862776.1| ribosomal protein S18 [Calycanthus floridus var. glaucus]
gi|62287460|sp|Q7YJV4|RR18_CALFG RecName: Full=30S ribosomal protein S18, chloroplastic
gi|32399401|emb|CAD28743.1| ribosomal protein S18 [Calycanthus floridus var. glaucus]
Length = 100
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 41/56 (73%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+++F+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLISQFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLN 79
>gi|290790796|gb|ADD63053.1| ribosomal protein S18 [Potamophila parviflora]
Length = 163
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 33 KQPFRKPKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 89
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 90 TLAIKQARILSFLPFRN 106
>gi|189345698|ref|YP_001942227.1| 30S ribosomal protein S18 [Chlorobium limicola DSM 245]
gi|189339845|gb|ACD89248.1| ribosomal protein S18 [Chlorobium limicola DSM 245]
Length = 87
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K Q L ++K AR
Sbjct: 18 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKDQNLLTHSVKWAR 74
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 75 FLAVIPYV 82
>gi|295311750|ref|YP_003587487.1| ribosomal protein S18 [Oncidium Gower Ramsey]
gi|254833127|gb|ACT83130.1| ribosomal protein S18 [Oncidium Gower Ramsey]
Length = 101
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L++RFLS++GKI+ R + ++ K+QR + AIK+AR L L+ + N
Sbjct: 24 SGDRIDYRNMSLISRFLSEQGKILSRRTNRLTLKQQRLITIAIKQARILSLLPFRN 79
>gi|255926570|gb|ACU40897.1| ribosomal protein S18 [Festuca arundinacea]
Length = 149
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKG----APRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
+ P + R+ P + RIDY+++ L+NRF+S++GKI+ RI+ ++
Sbjct: 16 RKSKQPFRKFKKPFRKSKQPFRRRPRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLN 75
Query: 59 HKKQRELAKAIKRARYLGLIAYVN 82
K+QR + AIK+AR L + + N
Sbjct: 76 LKQQRLITLAIKQARILSFLPFRN 99
>gi|34811546|pdb|1PNS|R Chain R, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811602|pdb|1PNX|R Chain R, Crystal Structure Of The Wild Type Ribosome From E.
Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx,
Contains Only Molecules Of The 30s Ribosomal Subunit.
The 50s Subunit Is In The Pdb File 1pny.
gi|56966340|pdb|1VOQ|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966393|pdb|1VOS|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966446|pdb|1VOV|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966499|pdb|1VOX|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966552|pdb|1VOZ|R Chain R, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|67464181|pdb|1X18|H Chain H, Contact Sites Of Era Gtpase On The Thermus Thermophilus
30s Subunit
Length = 73
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 18 DYRNVEVLKRFLSETGKILPRRRTGLSGKEQRILAKTIKRARILGLLPFTE 68
>gi|32475377|ref|NP_868371.1| 30S ribosomal protein S18 [Rhodopirellula baltica SH 1]
gi|32445918|emb|CAD78649.1| 30S ribosomal protein S18 [Rhodopirellula baltica SH 1]
Length = 55
Score = 81.8 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYKD+ LL++ ++++G+I+ R S + Q + AIKRAR++ L+ YV
Sbjct: 2 YVDYKDLELLSKMVNRQGRIMGRRKSGCTAASQHAVTAAIKRARFMALLPYVG 54
>gi|189095362|ref|YP_001936375.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
gi|157694705|gb|ABV65981.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
gi|157777936|gb|ABV70122.1| 30S ribosomal protein S18 [Heterosigma akashiwo]
Length = 70
Score = 81.5 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I YKDI LL F++++GKI+P R + ++ K+Q +LA+A+KRAR L+ Y+
Sbjct: 15 IRYKDIELLRSFITEQGKILPRRTTHLTVKQQNQLARAVKRARMAKLLPYI 65
>gi|1350881|sp|P49169|RR18_PEA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|1054830|emb|CAA57885.1| chloroplast ribosomal protein S18 [Pisum sativum]
Length = 110
Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + ++ S RR S + + RIDYK++ LL +F+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFVKSKQSIRRSSPLI--QSGDRIDYKNLSLLFKFISRQGKILSRRVNKLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ +VN
Sbjct: 60 RLITIAIKQARILSLLPFVN 79
>gi|193211786|ref|YP_001997739.1| 30S ribosomal protein S18 [Chlorobaculum parvum NCIB 8327]
gi|193085263|gb|ACF10539.1| ribosomal protein S18 [Chlorobaculum parvum NCIB 8327]
Length = 87
Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L +IK AR
Sbjct: 18 LASKKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQSLLTHSIKWAR 74
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 75 FLAIIPYV 82
>gi|326517348|dbj|BAK00041.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L+ FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 171 TKEVLRKADFRNVRFLSNFLTEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 230
>gi|320449317|ref|YP_004201413.1| 30S ribosomal protein S18 [Thermus scotoductus SA-01]
gi|320149486|gb|ADW20864.1| 30S ribosomal protein S18 [Thermus scotoductus SA-01]
Length = 88
Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + ++ K+QR LA+ IKRAR LGL+ +
Sbjct: 33 DYRNVEVLKRFLSETGKILPRRRTGLTAKEQRILARTIKRARILGLLPFTE 83
>gi|218296081|ref|ZP_03496850.1| ribosomal protein S18 [Thermus aquaticus Y51MC23]
gi|218243458|gb|EED09987.1| ribosomal protein S18 [Thermus aquaticus Y51MC23]
Length = 89
Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DY+++ +L RFLS+ GKI+P R + +S K+QR LAK IKRAR LGL+ +
Sbjct: 34 DYRNVEVLRRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTE 84
>gi|295065749|ref|YP_003587689.1| ribosomal protein S18 [Anomochloa marantoidea]
gi|251765273|gb|ACT15427.1| ribosomal protein S18 [Anomochloa marantoidea]
Length = 156
Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + + RR+ RIDY+++ L+N+F+S++GKI+ RI+ ++ K+QR
Sbjct: 31 KSKQSFRKSKQTFRRRP---RIGPGDRIDYRNMSLINQFISEQGKILSRRINRLTLKQQR 87
Query: 64 ELAKAIKRARYLGLIAYVN 82
+ AIK+AR L + + N
Sbjct: 88 LITIAIKQARILSFLPFRN 106
>gi|169142811|ref|YP_001687236.1| ribosomal protein S18 [Aneura mirabilis]
gi|205831414|sp|B0YPQ0|RR18_ANEMR RecName: Full=Plastid 30S ribosomal protein S18
gi|153973837|gb|ABS54497.1| ribosomal protein S18 [Aneura mirabilis]
Length = 75
Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ R + R++ + + IDY++I LL RF+S++G+I+ R + ++ K+QR L A
Sbjct: 1 MNRSKKNSRKRLPAI--RSGEFIDYRNISLLRRFVSEQGRILSRRTNRLTSKQQRVLTAA 58
Query: 69 IKRARYLGLIAYVN 82
IK+AR L + + N
Sbjct: 59 IKQARILASLPFPN 72
>gi|197131550|gb|ACH47293.1| ribosomal protein S18 [Geranium palmatum]
Length = 136
Score = 81.1 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
P ++ S RR+ P+ K +I Y+++ L++RF+SQ+GKIV R++ ++ K+QR L
Sbjct: 21 PFGKKKRSVRRRMSPIKLKRGDQIQYRNVWLISRFISQQGKIVSRRMTRLTLKQQRLLTI 80
Query: 68 AIKRARYLGLIAY 80
AIK+AR L L+++
Sbjct: 81 AIKQARILSLLSF 93
>gi|115482774|ref|NP_001064980.1| Os10g0500500 [Oryza sativa Japonica Group]
gi|22165064|gb|AAM93681.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|31432894|gb|AAP54470.1| ribosomal protein S18 containing protein, expressed [Oryza sativa
Japonica Group]
gi|113639589|dbj|BAF26894.1| Os10g0500500 [Oryza sativa Japonica Group]
Length = 274
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 163 TEEVLKKADFRNVRFLANFLTEAGIIIKRSQTRISAKAQRKVAREIKTARALGLLPFTTM 222
>gi|309322385|ref|YP_003934465.1| ribosomal protein S18 [Cathaya argyrophylla]
gi|307683311|dbj|BAJ19618.1| ribosomal protein S18 [Cathaya argyrophylla]
Length = 86
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
P RR++ RR P+ + R+DYK++ ++RF+S++GKI+ R++ ++ K+QR
Sbjct: 8 PKRSFRRHLKPIRRHLSPI--RPGDRLDYKNMSPISRFISEQGKILSGRVNRLTSKQQRL 65
Query: 65 LAKAIKRARYLGLIAYV 81
+ AIKRAR L L+ ++
Sbjct: 66 MTNAIKRARILSLLPFL 82
>gi|326509005|dbj|BAJ86895.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522312|dbj|BAK07618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L+ FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 166 TKEVLRKADFRNVRFLSNFLTEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 225
>gi|34500936|ref|NP_904121.1| ribosomal protein S18 [Amborella trichopoda]
gi|62287447|sp|Q70XY4|RR18_AMBTC RecName: Full=30S ribosomal protein S18, chloroplastic
gi|34481651|emb|CAD45128.1| ribosomal protein S18 [Amborella trichopoda]
Length = 101
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
RIDY+++ L+ RF+S++GKI+ R++ ++ K+QR + AIK+AR L + ++N
Sbjct: 24 SGDRIDYRNMSLIGRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSPLPFLN 79
>gi|194033314|ref|YP_002000407.1| ribosomal protein S18 [Oedogonium cardiacum]
gi|186968931|gb|ACC97254.1| ribosomal protein S18 [Oedogonium cardiacum]
Length = 165
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL ++S GKI+P R + V+ K+QR L KAIK AR LGL+ +V
Sbjct: 105 KFIDYKNRSLLQEYISFDGKILPKRKTGVTTKQQRFLTKAIKTARILGLLPFV 157
>gi|149174519|ref|ZP_01853145.1| 30S ribosomal protein S18 [Planctomyces maris DSM 8797]
gi|148846629|gb|EDL60966.1| 30S ribosomal protein S18 [Planctomyces maris DSM 8797]
Length = 99
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 21 CPLSGKGAP----RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
C G +DYKD+R L L + G+I+P R + S QR + KA+ RAR++G
Sbjct: 32 CRFCPDGNIPRPVYVDYKDLRTLRSLLDREGRILPRRRTGTSALYQRAVRKAVLRARFIG 91
Query: 77 LIAYV 81
L+ YV
Sbjct: 92 LLPYV 96
>gi|212275284|ref|NP_001130172.1| hypothetical protein LOC100191266 [Zea mays]
gi|194688464|gb|ACF78316.1| unknown [Zea mays]
Length = 180
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
RR+ + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK A
Sbjct: 66 KNPPRRQFETTTAEVLKKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKIAREIKTA 125
Query: 73 RYLGLIAYVNL 83
R GL+ + +
Sbjct: 126 RAFGLMPFTTM 136
>gi|237688462|ref|YP_002905081.1| ribosomal protein S18 [Picea sitchensis]
gi|226875291|gb|ACO89030.1| ribosomal protein S18 [Picea sitchensis]
Length = 96
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 4 VAPTPLLRRNVSH-RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P RR+++ RR P+ + RIDYK++ L++RF+S++GKI+ R++ ++ K+Q
Sbjct: 16 LTPIRXXRRHLTPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSGRVNRLTSKQQ 73
Query: 63 RELAKAIKRARYLGLIAYV 81
R + AIKRAR L+ ++
Sbjct: 74 RLITNAIKRARIPSLLPFL 92
>gi|215400694|ref|YP_002327457.1| ribosomal protein S18 [Vaucheria litorea]
gi|194441144|gb|ACF70872.1| ribosomal protein S18 [Vaucheria litorea]
Length = 92
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 43/56 (76%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
K IDYK+I LL+ FL+++GKI P R + ++ K+QR+LAK++K+AR+L L+ ++
Sbjct: 12 KPTEIIDYKNIDLLHSFLNRQGKIRPRRSTKLTLKQQRKLAKSVKQARFLNLLPFI 67
>gi|110456729|gb|ABG74832.1| ribosomal protein S18 [Jasminum subhumile]
Length = 149
Score = 81.1 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 41/57 (71%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
K +ID+ + LLN+F+SQ+GKI+ +++ ++ K+QR + AIK+AR L L+ +V+
Sbjct: 31 KPGDQIDFTNTSLLNQFISQQGKILSRKVTRLTLKQQRLMTIAIKQARILSLLPFVS 87
>gi|290790863|gb|ADD63119.1| ribosomal protein S18 [Microlaena stipoides]
Length = 163
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P + RR+ RIDY+++ L+NRF+S++GKI+ RI+ ++ K+QR +
Sbjct: 33 KQPFRKSKQPFRRRP---RIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLI 89
Query: 66 AKAIKRARYLGLIAYVN 82
AIK+AR L + + N
Sbjct: 90 TLAIKQARILSFLPFRN 106
>gi|169142732|ref|YP_001687159.1| ribosomal protein S18 [Oenothera argillicola]
gi|169143053|ref|YP_001687473.1| ribosomal protein S18 [Oenothera parviflora]
gi|205831403|sp|B0Z4P8|RR18_OENAR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|205831406|sp|B0Z5F0|RR18_OENPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|159792970|gb|ABW98726.1| ribosomal protein S18 [Oenothera argillicola]
gi|159895579|gb|ABX10143.1| ribosomal protein S18 [Oenothera parviflora]
Length = 107
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + L+ S RR+ P+ + RIDY++I L++RF+SQ+GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFLKSKRSFRRRLPPI--QSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAY 80
R + AIK+AR L L+ +
Sbjct: 60 RLITIAIKQARILSLLPF 77
>gi|108773084|ref|YP_635993.1| ribosomal protein S18 [Scenedesmus obliquus]
gi|122231586|sp|Q1KVT1|RR18_SCEOB RecName: Full=30S ribosomal protein S18, chloroplastic
gi|88696650|gb|ABD48276.1| ribosomal protein S18 [Scenedesmus obliquus]
Length = 188
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCP-----------LSGKGAPR------IDYKDIRLLNRFL 43
+A V + R+K K IDYK LL R++
Sbjct: 83 LARVNQKKQRKLEQKKRKKPLKPIIPPKSFILLFKDKPEKYVYNRRIIDYKHCGLLQRYI 142
Query: 44 SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
GKI+P R + ++ K+QR +AK IK AR +GL+ +V
Sbjct: 143 GLGGKILPRRQTKLTAKQQRYVAKTIKSARIMGLLPFVT 181
>gi|227325958|ref|ZP_03829982.1| 30S ribosomal protein S18 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 71
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
RRK C + +G IDYKDI L ++++ GKIVPSRI+ K
Sbjct: 3 RYFRRRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAK 50
>gi|297519373|ref|ZP_06937759.1| 30S ribosomal protein S18 [Escherichia coli OP50]
Length = 50
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
I L ++++ GKIVPSRI+ K QR+LA+AIKRARYL L+ Y +
Sbjct: 1 IATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTD 47
>gi|74001790|ref|XP_859432.1| PREDICTED: similar to 28S ribosomal protein S18c, mitochondrial
precursor (MRP-S18-c) (Mrps18c) (MRP-S18-1) isoform 2
[Canis familiaris]
Length = 89
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 10 KKCILCG---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGF 66
Query: 78 IAYV 81
+
Sbjct: 67 MPVT 70
>gi|125575298|gb|EAZ16582.1| hypothetical protein OsJ_32054 [Oryza sativa Japonica Group]
Length = 220
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 109 TEEVLKKADFRNVRFLANFLTEAGIIIKRSQTRISAKAQRKVAREIKTARALGLLPFTTM 168
>gi|20095236|sp|P80382|RS18_THETH RecName: Full=30S ribosomal protein S18
gi|10120581|pdb|1FKA|R Chain R, Structure Of Functionally Activated Small Ribosomal
Subunit At 3.3 A Resolution
gi|10835602|pdb|1FJG|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|11514244|pdb|1G1X|C Chain C, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|11514249|pdb|1G1X|H Chain H, Structure Of Ribosomal Proteins S15, S6, S18, And 16s
Ribosomal Rna
gi|13096411|pdb|1HR0|R Chain R, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399809|pdb|1HNW|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399831|pdb|1HNX|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399853|pdb|1HNZ|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278027|pdb|1GIX|U Chain U, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278073|pdb|1IBK|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278094|pdb|1IBL|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278118|pdb|1IBM|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826137|pdb|1JGO|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgo, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826162|pdb|1JGP|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgp, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|15826187|pdb|1JGQ|U Chain U, The Path Of Messenger Rna Through The Ribosome. This
File, 1jgq, Contains The 30s Ribosome Subunit, Three
Trna, And Mrna Molecules. 50s Ribosome Subunit Is In
The File 1giy
gi|20663903|pdb|1J5E|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065893|pdb|1N32|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065920|pdb|1N33|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065947|pdb|1N34|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065973|pdb|1N36|R Chain R, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position
gi|28373716|pdb|1ML5|U Chain U, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177417|pdb|1XMO|R Chain R, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177440|pdb|1XMQ|R Chain R, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To
The Decoding Center
gi|58177481|pdb|1XNQ|R Chain R, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177504|pdb|1XNR|R Chain R, Crystal Structure Of An Inosine-Cytosine Wobble Base
Pair In The Context Of The Decoding Center
gi|66361071|pdb|1YL4|U Chain U, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192253|pdb|2B64|R Chain R, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf1 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Subunit, Trnas,
Mrna And Release Factor Rf1 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf1 And Is Described In Remark 400.
gi|88192316|pdb|2B9M|R Chain R, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor
Rf2 From A Crystal Structure Of The Whole Ribosomal
Complex. This File Contains The 30s Ribosomal Subunit,
Trnas, Mrna And Release Factor Rf2 From A Crystal
Structure Of The Whole Ribosomal Complex". The Entire
Crystal Structure Contains One 70s Ribosome, Trnas,
Mrna And Release Factor Rf2 And Is Described In Remark
400.
gi|88192372|pdb|2B9O|R Chain R, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s
Subunit, Trnas And Mrna From A Crystal Structure Of The
Whole Ribosomal Complex With A Stop Codon In The A-Site
And Is Described In Remark 400.
gi|110591340|pdb|2F4V|R Chain R, 30s Ribosome + Designer Antibiotic
gi|116667671|pdb|2HHH|R Chain R, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|119389729|pdb|2HGI|U Chain U, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome Showing How The 16s 3'-End Mimicks Mrna E And
P Codons. This Entry 2hgi Contains 30s Ribosomal
Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb
Entry 2hgj.
gi|119389786|pdb|2HGP|U Chain U, Crystal Structure Of The 70s Thermus Thermophilus
Ribosome With Translocated And Rotated Shine-Dalgarno
Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit.
The 50s Ribosomal Subunit Can Be Found In Pdb Entry
2hgq.
gi|119389842|pdb|2HGR|U Chain U, 70s T.Th. Ribosome Functional Complex With Mrna And E-
And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|186972866|pdb|2VQE|R Chain R, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972889|pdb|2VQF|R Chain R, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|307776629|pdb|3OTO|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From A
Ksga Mutant Of Thermus Thermophilus (Hb8)
gi|6739549|gb|AAF27297.1|AF146075_3 ribosomal protein S18 [Thermus thermophilus]
Length = 88
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +R S + K + DY+++ +L RFLS+ GKI+P R + +S K+QR L
Sbjct: 8 PKKEAQRRPSRKAKV-KATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSGKEQRIL 66
Query: 66 AKAIKRARYLGLIAYVN 82
AK IKRAR LGL+ +
Sbjct: 67 AKTIKRARILGLLPFTE 83
>gi|290487276|gb|ADD30022.1| ribosomal protein S18 [Plumbago auriculata]
Length = 95
Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + LL+ RR+ P+ + RIDY++I L+NRFLS++GKI+ R + ++ K+Q
Sbjct: 2 DKSKRSLLKPKRPFRRRLPPI--QSGDRIDYRNISLMNRFLSEQGKILSRRRNKLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L L+ + N
Sbjct: 60 RLITIAIKQARILSLLPFRN 79
>gi|197131556|gb|ACH47296.1| ribosomal protein S18 [Pelargonium cotyledonis]
Length = 135
Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
PL + S RR+ P+ + IDY++I L+ RF+SQ+GKI+ R++ ++ K+Q
Sbjct: 30 SKNKRPLSKNKRSVRRRPSPI--QPGDLIDYRNISLIGRFISQQGKILSRRVNRLTLKQQ 87
Query: 63 RELAKAIKRARYLGLIAY 80
R L AIK+AR L + +
Sbjct: 88 RRLTLAIKQARILSSLPF 105
>gi|14278547|pdb|1I94|R Chain R, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278568|pdb|1I95|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278589|pdb|1I96|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278611|pdb|1I97|R Chain R, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241292|pdb|2E5L|R Chain R, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna
Via The Shine- Dalgarno Interaction
gi|226887646|pdb|2ZM6|R Chain R, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 87
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P +R S + K + DY+++ +L RFLS+ GKI+P R + +S K+QR L
Sbjct: 7 PKKEAQRRPSRKAKV-KATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSGKEQRIL 65
Query: 66 AKAIKRARYLGLIAYVN 82
AK IKRAR LGL+ +
Sbjct: 66 AKTIKRARILGLLPFTE 82
>gi|326918710|ref|XP_003205631.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Meleagris gallopavo]
Length = 109
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKA 68
+ K C L G +DYK+++LL++F+S G+I I+ + KKQ+E++KA
Sbjct: 23 MENPYKEPPKKCILCGIK---VDYKNVQLLSQFVSPYSGRIYGRHITGLCDKKQKEISKA 79
Query: 69 IKRARYLGLIA 79
IKRA LG +
Sbjct: 80 IKRAHILGFMP 90
>gi|290487254|gb|ADD30011.1| ribosomal protein S18 [Rhododendron simsii]
Length = 112
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+ + RR+ P+ + RIDY+++ L++RF+SQ+GKI+ R++ ++ K+QR
Sbjct: 3 KSKRRFFKSKRPFRRRLPPI--QSGDRIDYRNMTLISRFISQQGKILSRRVNRLTLKQQR 60
Query: 64 ELAKAIKRARYLGLIAYVN 82
+ AIK+AR L + ++N
Sbjct: 61 LITIAIKQARILSSLPFLN 79
>gi|148688327|gb|EDL20274.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus
musculus]
gi|148688328|gb|EDL20275.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus
musculus]
Length = 89
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L R+DYK+++LL++F+S G I I+ + KKQRE+ KAIKRA+ +G
Sbjct: 10 KKCVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGF 66
Query: 78 IAYV 81
+
Sbjct: 67 MPVT 70
>gi|187763123|ref|YP_001876598.1| ribosomal protein S18 [Welwitschia mirabilis]
gi|163311653|gb|ABY26811.1| ribosomal protein S18 [Welwitschia mirabilis]
gi|220983438|dbj|BAH11207.1| ribosomal protein S18 [Welwitschia mirabilis]
Length = 192
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 4 VAPTPLLRRNVSHRR-KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
P P R R+ P+ K +I+YK++ L+NR++SQ+GKI+ +++ ++ K+Q
Sbjct: 73 KPPRPTSSRKRRPRKISKKPIQIKSEDQINYKNVNLINRYISQQGKILSRKVNKLTWKQQ 132
Query: 63 RELAKAIKRARYLGLIAYV 81
R +A AIKRAR L + +
Sbjct: 133 RLMAVAIKRARILSFLPFT 151
>gi|197131548|gb|ACH47292.1| ribosomal protein S18 [Geranium macrorrhizum]
Length = 123
Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 47/66 (71%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
S RR+ P+ K +I Y+++ L++RF+SQ+GKI+ R++ ++ K+QR L AIK+AR
Sbjct: 29 SVRRRVSPIKLKRGDQIQYRNVWLISRFISQQGKILSRRVTRLTLKQQRLLTIAIKQARI 88
Query: 75 LGLIAY 80
L L+++
Sbjct: 89 LSLLSF 94
>gi|115531924|ref|YP_784080.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|115532020|ref|YP_784176.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|122164222|sp|Q06FK5|RR18_PELHO RecName: Full=30S ribosomal protein S18, chloroplastic
gi|112382078|gb|ABI17271.1| ribosomal protein S18 [Pelargonium x hortorum]
gi|112382174|gb|ABI17367.1| ribosomal protein S18 [Pelargonium x hortorum]
Length = 141
Score = 80.3 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 6 PTPLLRRN----VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
P P +R S RR+S + IDY++I L+ RF+SQ+GKI+ R++ V+ K+
Sbjct: 31 PLPPSKRKGKPPKSPRRRSSRIK--PGDLIDYRNISLIGRFISQQGKILSRRVNRVTLKQ 88
Query: 62 QRELAKAIKRARYLGLIAY 80
QR L AIK+AR L + +
Sbjct: 89 QRRLTIAIKQARILSSLPF 107
>gi|327273057|ref|XP_003221299.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Anolis
carolinensis]
Length = 136
Score = 80.3 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+ K C L G +DYK+I+LL++F+S G+I I+ + KKQ EL+KA
Sbjct: 49 MENPYKEPPKKCILCGM---TLDYKNIQLLSQFVSPYTGRIFGRHITGLCEKKQSELSKA 105
Query: 69 IKRARYLGLIAYVNL 83
I+RAR G++ + N+
Sbjct: 106 IRRARKTGMVPFYNM 120
>gi|320102574|ref|YP_004178165.1| 30S ribosomal protein S18P [Isosphaera pallida ATCC 43644]
gi|319749856|gb|ADV61616.1| SSU ribosomal protein S18P [Isosphaera pallida ATCC 43644]
Length = 80
Score = 79.9 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 11 RRNVSHRRKSCPLSGKGA----PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
+R+ +R+ C +DYKD+ LL + + + K+ + S QR +
Sbjct: 4 KRSSRNRKNRCRFCTAQGCPRPAYVDYKDVGLLKKLCTNQSKMFSRKRSGNCAAFQRAAS 63
Query: 67 KAIKRARYLGLIAYVN 82
AIKRAR+L L+ YV
Sbjct: 64 LAIKRARFLALMPYVG 79
>gi|295137025|ref|YP_003587572.1| ribosomal protein S18 [Pisum sativum]
gi|293338597|gb|ADE43570.1| ribosomal protein S18 [Pisum sativum]
Length = 110
Score = 79.9 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ + ++ S RR S + + RIDYK++ LL +F+S++GKI+ R++ ++ K+Q
Sbjct: 2 DKSKRLFVKSKQSIRRSSPLI--QSGDRIDYKNLSLLFKFISRQGKILSRRVNKLTLKQQ 59
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L LI +VN
Sbjct: 60 RLITIAIKQARILSLIPFVN 79
>gi|242624337|ref|YP_003002255.1| 30S ribosomal protein S18 [Aureoumbra lagunensis]
gi|239997445|gb|ACS36967.1| 30S ribosomal protein S18 [Aureoumbra lagunensis]
Length = 67
Score = 79.9 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
D+ +I LL +L + +I+P R++ +S K QR+L KA+KRAR LGL+ +V
Sbjct: 7 NKIEDFDFTNISLLVEYLDDQKRILPRRVTELSIKNQRKLTKAVKRARILGLLPFV 62
>gi|78186006|ref|YP_374049.1| 30S ribosomal protein S18 [Chlorobium luteolum DSM 273]
gi|123771144|sp|Q3B6M5|RS18_PELLD RecName: Full=30S ribosomal protein S18
gi|78165908|gb|ABB23006.1| SSU ribosomal protein S18P [Chlorobium luteolum DSM 273]
Length = 90
Score = 79.9 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ +RK S DY+D R L RF++ +GKI+P RI+ ++ K+Q L ++K AR
Sbjct: 21 LASKRKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLTAKEQNLLTHSVKWAR 77
Query: 74 YLGLIAYV 81
+L +I YV
Sbjct: 78 FLAVIPYV 85
>gi|326489416|dbj|BAK01689.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520481|dbj|BAK07499.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527755|dbj|BAK08152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 79.5 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L F+++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 181 TKEVLSKADFRNVRFLANFITEAGIIIKRNQTKISAKAQRKVAREIKTARALGLMPFTTM 240
>gi|242034559|ref|XP_002464674.1| hypothetical protein SORBIDRAFT_01g023140 [Sorghum bicolor]
gi|241918528|gb|EER91672.1| hypothetical protein SORBIDRAFT_01g023140 [Sorghum bicolor]
Length = 310
Score = 79.5 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R + + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK A
Sbjct: 195 KNPPRPQFETTTAEVLRKADFRNVRFLSHFLTEAGIIIKRSQTRISAKAQRKIAREIKTA 254
Query: 73 RYLGLIAYVNL 83
R GL+ + +
Sbjct: 255 RAFGLMPFTTM 265
>gi|294462182|gb|ADE76643.1| unknown [Picea sitchensis]
Length = 340
Score = 79.5 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P +RR R + +G+ + D++++R L F+++ G + P + + K QR++A
Sbjct: 208 KPAVRRPF-KRLEFQTTTGEVLRKADFRNVRFLQNFITEAGILYPRKKFGIRAKAQRKIA 266
Query: 67 KAIKRARYLGLIAYVNL 83
+ IK AR GL+ + ++
Sbjct: 267 REIKTARAFGLMPFTSM 283
>gi|222084167|ref|YP_002519761.1| ribosomal protein S18 [Gnetum parvifolium]
gi|205831391|sp|A6BM60|RR18_GNEPA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|149941476|dbj|BAF64905.1| ribosomal protein S18 [Gnetum parvifolium]
gi|220983504|dbj|BAH11272.1| ribosomal protein S18 [Gnetum parvifolium]
Length = 98
Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
AP+ +R + +K + + +I+YK++ L+N F+SQR KI+ +++ ++ K+QR
Sbjct: 15 APSGSRKRPLKKFKKPIRIKSE--DQINYKNVSLINGFISQRAKILSRKVTKLTWKQQRL 72
Query: 65 LAKAIKRARYLGLIAYV 81
++ AIKRAR L L+ ++
Sbjct: 73 MSVAIKRARILSLLPFI 89
>gi|149046776|gb|EDL99550.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 89
Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L R+DYK+++LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G
Sbjct: 10 KKCVLCE---KRVDYKNVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGF 66
Query: 78 IAYV 81
+
Sbjct: 67 MPVT 70
>gi|125532533|gb|EAY79098.1| hypothetical protein OsI_34205 [Oryza sativa Indica Group]
Length = 274
Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 24 SGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + + D++++R L FL++ G I+ + +S K QR++A+ IK AR LGL+ + +
Sbjct: 163 TEEVLKKADFRNVRFLANFLTEAGIIIKRSQTCISAKAQRKVAREIKTARALGLLPFTTM 222
>gi|253795692|ref|YP_003038788.1| putative 30S ribosomal subunit protein S18 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253740000|gb|ACT34335.1| putative 30S ribosomal subunit protein S18 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 169
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+ +HRR+ + +D+K++ LL+ L++RG I P + + +KQ++LA+ IKR
Sbjct: 90 DYAHRRERERANAADVGALDFKNVALLHSLLTERGGIPPRSATGFTRRKQKKLAREIKRC 149
Query: 73 RYLGLI 78
R+LGL+
Sbjct: 150 RHLGLL 155
>gi|283779507|ref|YP_003370262.1| 30S ribosomal protein S18 [Pirellula staleyi DSM 6068]
gi|283437960|gb|ADB16402.1| ribosomal protein S18 [Pirellula staleyi DSM 6068]
Length = 95
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 5 APTPLLRRNVSHR---RKSCPLSGKGAP----RIDYKDIRLLNRFLSQRGKIVPSRISSV 57
+ T R+ R +K P+ G +DYKD+ LL + +++ GKIV R +
Sbjct: 10 SKTAKPRKRPKARVKTKKKDPIFVNGERPRPMFVDYKDLELLKKLINRHGKIVNRRKTGC 69
Query: 58 SHKKQRELAKAIKRARYLGLIAYVN 82
+ Q ++ AIKRAR++ L+ YV
Sbjct: 70 TAVSQHAVSLAIKRARFMALLPYVG 94
>gi|221220090|gb|ACM08706.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 132
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
+ +K C L +D+K+++LL++F+S G+I I+ + KKQRE+ K
Sbjct: 43 QMENPYKQPQKGCILCN---ITVDFKNVQLLSQFISPHTGRIYGRHITGLCGKKQREIGK 99
Query: 68 AIKRARYLGLIAYVN 82
AIK+A +G ++ +
Sbjct: 100 AIKKAHSMGFMSVTH 114
>gi|221110694|ref|XP_002155234.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 146
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 11 RRNVSHRRKSCPLSGKGAPRI--DYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
R +V R C L P I DYK++RLL++F+S GKI SRI+ + KQRELA+
Sbjct: 60 RLDVEDRPTGCLLCPHRNPEIELDYKNVRLLSQFVSPHTGKIYGSRITGLCPNKQRELAQ 119
Query: 68 AIKRARYLGLIAYV 81
I+RAR +GL+
Sbjct: 120 NIRRARKVGLMPVT 133
>gi|290487244|gb|ADD30006.1| ribosomal protein S18 [Lonicera japonica]
Length = 152
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P + RR+ P+ + +I+Y+++ L++RF+S +GKI+P R+ ++ K+Q
Sbjct: 23 RKSKRPFRKSKRPFRRRLPPI--QPGDQIEYRNMSLISRFISDQGKILPRRVKRLTLKQQ 80
Query: 63 RELAKAIKRARYLGLIAYVN 82
R + AIK+AR L + ++N
Sbjct: 81 RLITLAIKQARILSSLPFLN 100
>gi|189499150|ref|YP_001958620.1| 30S ribosomal protein S18 [Chlorobium phaeobacteroides BS1]
gi|189494591|gb|ACE03139.1| ribosomal protein S18 [Chlorobium phaeobacteroides BS1]
Length = 87
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
++K S DY+D R L RF++ +GKI+P RI+ +S K+Q L ++K AR+L
Sbjct: 21 KKKV---SKNQVVFFDYRDERKLKRFINDQGKIIPRRITGLSAKEQNLLTHSVKWARFLS 77
Query: 77 LIAYV 81
+I YV
Sbjct: 78 IIPYV 82
>gi|318059780|ref|ZP_07978503.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actG]
gi|318075180|ref|ZP_07982512.1| 30S ribosomal protein S18 [Streptomyces sp. SA3_actF]
gi|333022795|ref|ZP_08450859.1| putative 30S ribosomal protein S18 [Streptomyces sp. Tu6071]
gi|332742647|gb|EGJ73088.1| putative 30S ribosomal protein S18 [Streptomyces sp. Tu6071]
Length = 79
Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 10 LRRNVSHRR-----KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ R HRR + PL G IDYKD LL +F+S RGKI R++ VS ++QR+
Sbjct: 1 MPRTTHHRRDTRASRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQ 60
Query: 65 LAKAIKRARYLGLIAY 80
LA AIK AR + L+ Y
Sbjct: 61 LAAAIKNAREMALLPY 76
>gi|302523357|ref|ZP_07275699.1| ribosomal protein S18 [Streptomyces sp. SPB78]
gi|302432252|gb|EFL04068.1| ribosomal protein S18 [Streptomyces sp. SPB78]
Length = 79
Score = 78.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + + PL G IDYKD LL +F+S RGKI R++ VS ++QR+LA AIK
Sbjct: 8 RRDTRAPRPNPLDAAGITYIDYKDTDLLRKFISDRGKIRSRRVTRVSAQQQRQLAAAIKN 67
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 68 AREMALLPY 76
>gi|28493073|ref|NP_787234.1| 30S ribosomal protein S18 [Tropheryma whipplei str. Twist]
gi|28572281|ref|NP_789061.1| 30S ribosomal protein S18 [Tropheryma whipplei TW08/27]
gi|59798890|sp|Q83GX3|RS18_TROWT RecName: Full=30S ribosomal protein S18
gi|59798893|sp|Q83IC1|RS18_TROW8 RecName: Full=30S ribosomal protein S18
gi|28410412|emb|CAD66798.1| 30s ribosomal protein S18 [Tropheryma whipplei TW08/27]
gi|28476113|gb|AAO44203.1| 30S ribosomal protein S18 [Tropheryma whipplei str. Twist]
Length = 83
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
RR P +DYKD+ L RFLS RGKI R++ S ++QR++AKAIK
Sbjct: 8 RRQPKADSVVAPPKRVSIKGLDYKDLASLKRFLSDRGKIRARRVTGASIQQQRQIAKAIK 67
Query: 71 RARYLGLIAY 80
AR +G+I +
Sbjct: 68 NAREMGVIPF 77
>gi|294656734|ref|XP_459046.2| DEHA2D13156p [Debaryomyces hansenii CBS767]
gi|199431699|emb|CAG87214.2| DEHA2D13156p [Debaryomyces hansenii]
Length = 192
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ V + + P G +D Y +L+RFLS G+I+P I+ + K Q++L+ AI
Sbjct: 109 RQAVPYEKMVDPFQKAGVDPLDIYTMPEILSRFLSSTGQILPREITGCNAKNQKKLSNAI 168
Query: 70 KRARYLGLIAYVN 82
KRAR GL++ V+
Sbjct: 169 KRARTCGLLSTVH 181
>gi|221222110|gb|ACM09716.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 138
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
+ +K C L +D+K+++LL++F+S G+I I+ + KKQRE+ K
Sbjct: 49 QMENPYKQPQKGCILCN---ITVDFKNVQLLSQFISPHTGRIYGRHITGLCGKKQREIGK 105
Query: 68 AIKRARYLGLIAYVN 82
AIK+A +G ++ +
Sbjct: 106 AIKKAHSMGFMSVTH 120
>gi|172072893|ref|YP_001806654.1| ribosomal protein S18 [Cryptomeria japonica]
gi|205831383|sp|B1VKE1|RR18_CRYJA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|171854912|dbj|BAG16652.1| ribosomal protein S18 [Cryptomeria japonica]
gi|239794281|dbj|BAH73278.1| ribosomal protein S18 [Cryptomeria japonica]
gi|239794363|dbj|BAH73359.1| ribosomal protein S18 [Cryptomeria japonica]
Length = 116
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
S R++ + + +IDYK+I L+NRF+S++GKI+ R + ++ K+QR +A+A+K+A
Sbjct: 47 QQSFRKRLS--TIRPGEQIDYKNISLINRFISEQGKILSRRTNRLALKQQRLIARAVKQA 104
Query: 73 RYLGLIAYVNL 83
R L LI +++L
Sbjct: 105 RILCLIPFLSL 115
>gi|309263593|ref|XP_003086086.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Mus
musculus]
gi|309270891|ref|XP_003085170.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Mus
musculus]
Length = 152
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E P P+ + K C L +DYK+++LL++F+S G I I+ + KK
Sbjct: 58 EDLPIPM-EKPYKEPLKKCVLCE---KHVDYKNVQLLSQFISPFTGCIYRRHITGLCGKK 113
Query: 62 QRELAKAIKRARYLGLIAYV 81
QRE+ KA KR + +G +
Sbjct: 114 QREITKATKRTQKMGFMPVT 133
>gi|239945965|ref|ZP_04697902.1| putative 30S ribosomal protein S18 [Streptomyces roseosporus NRRL
15998]
gi|239992434|ref|ZP_04713098.1| putative 30S ribosomal protein S18 [Streptomyces roseosporus NRRL
11379]
gi|291449420|ref|ZP_06588810.1| 30S ribosomal protein S18 2 [Streptomyces roseosporus NRRL 15998]
gi|291352367|gb|EFE79271.1| 30S ribosomal protein S18 2 [Streptomyces roseosporus NRRL 15998]
Length = 82
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 4 VAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
+A R+ + +R PL G IDYKD LL RF+S RGKI R++ +S ++QR
Sbjct: 1 MARQKDPRKPLKNR--PNPLDAAGITYIDYKDTDLLRRFISDRGKIRSRRVTRISAQQQR 58
Query: 64 ELAKAIKRARYLGLIAY 80
++A AIK AR + L+ Y
Sbjct: 59 QMAAAIKNAREMALLPY 75
>gi|317134117|ref|YP_004123447.1| ribosomal protein S18 [Rhizanthella gardneri]
gi|255985048|gb|ACU46595.1| ribosomal protein S18 [Rhizanthella gardneri]
Length = 89
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ N S R+ P+ +IDYK++ L+++F+S++G+I+ R + + K+QR + A
Sbjct: 8 FRKYNRSISRRLLPI--GPGDQIDYKNMSLISQFISEQGRILSRRANKLPLKQQRFITIA 65
Query: 69 IKRARYLGLIAY 80
IK+AR L L+ +
Sbjct: 66 IKQARILSLLPF 77
>gi|222139907|ref|YP_002519975.1| ribosomal protein S18 [Ephedra equisetina]
gi|220983576|dbj|BAH11343.1| ribosomal protein S18 [Ephedra equisetina]
Length = 97
Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P+ +R +K + + +I+YK++ L+N+F+SQRGKI+ ++++++ K+QR +
Sbjct: 16 PSGSRKRYPKVPKKPNLIKSEN--QINYKNMSLINQFISQRGKILSRKVNNLTCKQQRLI 73
Query: 66 AKAIKRARYLGLIAY 80
+ AIKRAR LGL+ +
Sbjct: 74 SIAIKRARILGLLPF 88
>gi|308811174|ref|XP_003082895.1| Ribosomal protein S18 (ISS) [Ostreococcus tauri]
gi|116054773|emb|CAL56850.1| Ribosomal protein S18 (ISS) [Ostreococcus tauri]
Length = 135
Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
R ++D R L +F+S GKI P R VS K QR++++AIK AR +G++ Y +
Sbjct: 70 ERTSFEDARFLTQFVSDTGKIYPKRRLGVSAKAQRKISRAIKTARQMGILPYTS 123
>gi|242039197|ref|XP_002466993.1| hypothetical protein SORBIDRAFT_01g018030 [Sorghum bicolor]
gi|241920847|gb|EER93991.1| hypothetical protein SORBIDRAFT_01g018030 [Sorghum bicolor]
Length = 310
Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R + + + + D++++R L+ FL++ G I+ + +S K QR++A+ IK A
Sbjct: 195 KNPPRPQFETTTAEVLRKADFRNVRFLSHFLTEAGIIIKRSQTRISAKAQRKIAREIKTA 254
Query: 73 RYLGLIAYVNL 83
R GL+ + +
Sbjct: 255 RAFGLMPFTTM 265
>gi|145218999|ref|YP_001129708.1| 30S ribosomal protein S18 [Prosthecochloris vibrioformis DSM 265]
gi|205616745|sp|A4SCJ7|RS18_PROVI RecName: Full=30S ribosomal protein S18
gi|145205163|gb|ABP36206.1| SSU ribosomal protein S18P [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++ ++K S A DY+D R L RF++ +GK++P RI+ +S K+Q L ++K AR
Sbjct: 21 LASKKKV---SKNQAVFFDYRDERKLKRFINDQGKMIPRRITGLSAKEQNLLTHSVKWAR 77
Query: 74 YLGLIAYVN 82
+L +I YV+
Sbjct: 78 FLAVIPYVS 86
>gi|307721628|ref|YP_003892768.1| 30S ribosomal protein S18P [Sulfurimonas autotrophica DSM 16294]
gi|306979721|gb|ADN09756.1| SSU ribosomal protein S18P [Sulfurimonas autotrophica DSM 16294]
Length = 87
Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK++ L LS+R KI+P R++ + Q + IKRAR L+ Y
Sbjct: 16 EAKVDFMDYKEVASLRFSLSERYKIMPRRLTGNCKRHQDMITVVIKRARAAALVPYT 72
>gi|332254445|ref|XP_003276340.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Nomascus
leucogenys]
Length = 154
Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
E PTP+ K C L ++YK+ +LL++F+S G I I+ + KK
Sbjct: 60 EDLPTPMEN-PYKESLKKCIL---RGKHVNYKNAQLLSQFVSPFTGCIYGRHITGLCGKK 115
Query: 62 QRELAKAIKRARYLGLIAYV 81
Q+E+ KAIKRA+ G +
Sbjct: 116 QKEITKAIKRAQITGFMPVT 135
>gi|296121128|ref|YP_003628906.1| ribosomal protein S18 [Planctomyces limnophilus DSM 3776]
gi|296013468|gb|ADG66707.1| ribosomal protein S18 [Planctomyces limnophilus DSM 3776]
Length = 94
Score = 77.6 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 21 CPLSGKGAPR------IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
C G + +DYKD++ L + + G ++ R + K QR + A+ RAR+
Sbjct: 25 CRFCPDGCDKPPRPIFVDYKDLKTLRAMIDREGNLLARRKTGTCVKYQRVVRDAVLRARF 84
Query: 75 LGLIAYV 81
+GL+ YV
Sbjct: 85 MGLLPYV 91
>gi|242620110|ref|YP_003002114.1| 30S ribosomal protein S18 [Aureococcus anophagefferens]
gi|239997355|gb|ACS36878.1| 30S ribosomal protein S18 [Aureococcus anophagefferens]
Length = 67
Score = 77.2 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ D+ DI+ L ++ + +I+P RI+ +S K QR+L KA+KRAR LGL+ +
Sbjct: 10 KKFDFTDIQTLAEYMDDQQRILPRRITELSIKNQRQLTKAVKRARLLGLLPFT 62
>gi|225704940|gb|ACO08316.1| 28S ribosomal protein S18c, mitochondrial precursor [Oncorhynchus
mykiss]
Length = 102
Score = 77.2 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 4 VAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
++P PL + ++ C L +D+K+++LL++F+S G++ I+ + KK
Sbjct: 7 LSPQPLQMENPYKQPQEGCILCN---VTVDFKNVQLLSQFISPHTGRVYGRHITGLCGKK 63
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QRE+AKAIK+A +G ++ +
Sbjct: 64 QREIAKAIKKAHSMGFMSVTH 84
>gi|246880781|gb|ACS95093.1| ribosomal protein S18 [Dunaliella salina]
Length = 140
Score = 77.2 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 82 IDYKHCGLLQRYIGLGGKILPRRQTRLTAKQQRYIAKTIKSARVMGLLPFVS 133
>gi|218514153|ref|ZP_03510993.1| 30S ribosomal protein S18 [Rhizobium etli 8C-3]
Length = 55
Score = 76.8 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
M+E + P +RR RRK+CP SG APRIDYKD+RLL R++S+RGKIVPSRI+
Sbjct: 1 MSEASSAP-VRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRIT 54
>gi|309322155|ref|YP_003934070.1| ribosomal protein S18 [Geranium palmatum]
gi|300069248|gb|ADJ66369.1| ribosomal protein S18 [Geranium palmatum]
Length = 136
Score = 76.8 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 47/67 (70%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
S RR+ P+ K +I Y+++ L++RF+SQ+GKIV R++ ++ K+QR L AIK+AR
Sbjct: 27 RSVRRRMSPIKLKRGDQIQYRNVWLISRFISQQGKIVSRRMTRLTLKQQRLLTIAIKQAR 86
Query: 74 YLGLIAY 80
L L+++
Sbjct: 87 ILSLLSF 93
>gi|254457706|ref|ZP_05071134.1| ribosomal protein S18 [Campylobacterales bacterium GD 1]
gi|207086498|gb|EDZ63782.1| ribosomal protein S18 [Campylobacterales bacterium GD 1]
Length = 87
Score = 76.8 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYK++ L LS+R KI+P R++ + Q + IKRAR L+ Y
Sbjct: 16 ESKVDFMDYKEVGALRFSLSERYKIMPRRLTGNCKRHQDMITVVIKRARAAALVPYT 72
>gi|115350013|ref|YP_764407.1| ribosomal protein S18 [Stigeoclonium helveticum]
gi|122165141|sp|Q06SF9|RR18_STIHE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|98990227|gb|ABF60194.1| ribosomal protein S18 [Stigeoclonium helveticum]
Length = 129
Score = 76.8 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK+ LL ++ GKI+P R + ++ K+QR L KAIK AR LGL+ +V
Sbjct: 71 IDYKNRSLLQEYIYFTGKIIPKRKTGITTKQQRYLTKAIKTARILGLLPFV 121
>gi|295136932|ref|YP_003587765.1| ribosomal protein S18 [Lathyrus sativus]
gi|293338654|gb|ADE43626.1| ribosomal protein S18 [Lathyrus sativus]
Length = 127
Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
RIDYK++ LL + +++ GKI+ R++ ++ K+QR + AIK+AR L L+ +
Sbjct: 36 DRIDYKNLSLLFKLVTREGKILSRRVNKLTLKQQRWITIAIKQARILSLLPF 87
>gi|148540187|ref|NP_001038655.2| 28S ribosomal protein S18c, mitochondrial [Danio rerio]
gi|133778758|gb|AAI34081.1| Mrps18c protein [Danio rerio]
Length = 136
Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 2 AEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSH 59
A P+ + K+C L +D+K+++LL++F+S G+I I+ +
Sbjct: 39 ASKDDMPIKMENPYKQPAKTCILCN---VTVDFKNVQLLSQFISPHTGRIYGRHITGLCG 95
Query: 60 KKQRELAKAIKRARYLGLI 78
+KQ+E+ KAIK++R +G +
Sbjct: 96 RKQKEVTKAIKKSRSMGFM 114
>gi|115391923|ref|YP_778511.1| ribosomal protein S18 [Jasminum nudiflorum]
gi|122164952|sp|Q06RB0|RR18_JASNU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110456244|gb|ABG74649.1| ribosomal protein S18 [Jasminum nudiflorum]
Length = 231
Score = 76.1 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+ +ID+ + LLN+F+SQ+GKI+P +++ ++ K+QR + AIK+AR L L+
Sbjct: 30 ESGHQIDFTNTSLLNQFISQQGKILPRKVTRLTLKQQRFMTSAIKQARILSLLP 83
>gi|328713007|ref|XP_003244971.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Acyrthosiphon pisum]
Length = 152
Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
++ C L DYK+ R+L++F+S+ G+I I+ + KQ + K IK+
Sbjct: 60 PYEKEKRLCILCKMNIVP-DYKNTRMLSQFISRFTGRIYGRHITGLCRHKQDHVEKEIKK 118
Query: 72 ARYLGLIAY 80
+R GL+ +
Sbjct: 119 SREAGLMPF 127
>gi|146423640|ref|XP_001487746.1| hypothetical protein PGUG_01123 [Meyerozyma guilliermondii ATCC
6260]
gi|146388867|gb|EDK37025.1| hypothetical protein PGUG_01123 [Meyerozyma guilliermondii ATCC
6260]
Length = 195
Score = 76.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 22 PLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
P G +D Y LL+RFLS G+I+P I+ ++K QR+L+ AIKRAR GL+
Sbjct: 123 PFENAGIDPLDVYMMPELLSRFLSSTGQILPREITGCNNKNQRKLSMAIKRARACGLL 180
>gi|150251496|ref|YP_001312229.1| ribosomal protein S18 [Cycas taitungensis]
gi|205831388|sp|A6H5K4|RR18_CYCTA RecName: Full=Chloroplast 30S ribosomal protein S18
gi|149941546|dbj|BAF64970.1| ribosomal protein S18 [Cycas taitungensis]
Length = 75
Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+ + S RR+ P+ + +ID+K++ +++F+S+RGKI+ R+S ++ K+QR + A
Sbjct: 1 MNKSKRSFRRRLPPIGSR--DQIDHKNMSSISQFISERGKILSGRVSRLTPKQQRLMTIA 58
Query: 69 IKRARYLGLIAYVN 82
IKRAR ++N
Sbjct: 59 IKRARIPSSSPFLN 72
>gi|153805596|ref|YP_001382177.1| ribosomal protein S18 [Leptosira terrestris]
gi|205831397|sp|A6YGA0|RR18_LEPTE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|134270127|gb|ABO69316.1| ribosomal protein S18 [Leptosira terrestris]
Length = 100
Score = 75.7 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK++ LL ++ GKI P R + ++ K+QR ++KAIK AR +GL+ +V
Sbjct: 44 EIIDYKNVILLRNGITAEGKIFPRRFTKLNAKQQRYMSKAIKNARMVGLLPFV 96
>gi|156552942|ref|XP_001602798.1| PREDICTED: similar to mitochondrial ribosomal protein, S18C,
putative [Nasonia vitripennis]
Length = 145
Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 2 AEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSH 59
AE A P+ L RK C L DYK++R L++F S+ G+I I+ +
Sbjct: 41 AEEADAPIELENPYQRERKICILCKHNIDP-DYKNVRFLSQFQSRFTGRIYGRHITGLCK 99
Query: 60 KKQRELAKAIKRARYLGLIAYVN 82
KQ + I +A++ GL+ + N
Sbjct: 100 YKQERVENEITKAQHAGLMPFYN 122
>gi|108796744|ref|YP_636554.1| ribosomal protein S18 [Zygnema circumcarinatum]
gi|122226719|sp|Q32RH2|RR18_ZYGCR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|61393728|gb|AAX45870.1| ribosomal protein S18 [Zygnema circumcarinatum]
Length = 85
Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ RIDYK++RLL RF+S++ KI+ R+S ++ K+QR +A+ IK AR L + +VN
Sbjct: 25 VQPGERIDYKNLRLLCRFVSKQAKILSRRVSRLTSKQQRTVARYIKSARVLAFMPFVN 82
>gi|84998800|ref|XP_954121.1| hypothetical protein [Theileria annulata]
gi|65305119|emb|CAI73444.1| hypothetical protein, conserved [Theileria annulata]
Length = 348
Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ D+ +L+ F+S+ G+I+P RI+ + K+Q ++ KAIK AR L L Y N
Sbjct: 262 NNNKPFSFHDLHVLHNFISEDGQILPRRINMTTRKQQIQIFKAIKIARNLALFPYNN 318
>gi|94733802|emb|CAK05014.1| novel protein similar to vertebrate mitochondrial ribosomal protein
S18C (MRPS18C) [Danio rerio]
Length = 136
Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 2 AEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSH 59
A P+ + K+C L +D+K+++LL++F+S G+I I+ +
Sbjct: 39 ASKDDMPIKMDNPYKQPAKTCILCN---VTVDFKNVQLLSQFISPHTGRIYGRHITGLCG 95
Query: 60 KKQRELAKAIKRARYLGLI 78
+KQ+E+ KAIK++R +G +
Sbjct: 96 RKQKEVTKAIKKSRSMGFM 114
>gi|325182642|emb|CCA17097.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 319
Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
D LL F++ G+I P R + + +QR++A+ IK AR+L L+ Y++
Sbjct: 188 DTDLLRLFVTPAGRIRPRRFTGLRGPQQRKVARGIKVARHLALLPYLS 235
>gi|47210459|emb|CAF94328.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+ +K C L +DYK+I+LL++F+S GKI + + KQ+++AKA
Sbjct: 42 MENPYKEPQKGCVLCN---VTVDYKNIQLLSQFISPHTGKIYGRHFTGLCGVKQKQVAKA 98
Query: 69 IKRARYLGLIAYVN 82
IK+A+ +G ++ +
Sbjct: 99 IKKAQSMGFMSVTH 112
>gi|326383105|ref|ZP_08204794.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
gi|326198241|gb|EGD55426.1| 30S ribosomal protein S18 [Gordonia neofelifaecis NRRL B-59395]
Length = 63
Score = 74.5 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
DYKD L RFL+ RG+I ++ +S ++QR LA AI+ AR + L+
Sbjct: 14 TFDYKDTETLRRFLTDRGRIRKRSVTGLSVQQQRRLATAIRNAREMALLP 63
>gi|254796461|ref|YP_003081297.1| hypothetical protein NRI_0061 [Neorickettsia risticii str.
Illinois]
gi|254589690|gb|ACT69052.1| conserved domain protein [Neorickettsia risticii str. Illinois]
Length = 84
Score = 74.5 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ L+ RF++ G+++ R + +S KKQR++AK +++ ++L L+ Y +
Sbjct: 26 KIEDFDYKNVALIKRFMTSVGRVLSRRATGLSAKKQRKMAKEVRKMKFLALVPYCD 81
>gi|2887383|emb|CAA76244.1| rps18 [Chlamydomonas reinhardtii]
Length = 125
Score = 74.1 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 66 YIDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVS 118
>gi|197131552|gb|ACH47294.1| ribosomal protein S18 [Monsonia speciosa]
Length = 174
Score = 74.1 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I+Y++I L+++F+SQ GKI+ +++ V+ K+QR L AIK+AR L L+ +
Sbjct: 32 DKINYRNISLISQFISQEGKILSRKVNRVTLKQQRLLTIAIKQARILSLLPF 83
>gi|309322241|ref|YP_003934319.1| ribosomal protein S18 [Monsonia speciosa]
gi|300069334|gb|ADJ66454.1| ribosomal protein S18 [Monsonia speciosa]
Length = 174
Score = 74.1 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I+Y++I L+++F+SQ GKI+ +++ V+ K+QR L AIK+AR L L+ +
Sbjct: 32 DKINYRNISLISQFISQEGKILSRKVNRVTLKQQRLLTIAIKQARILSLLPF 83
>gi|156598022|gb|ABU85277.1| ribosomal protein S18 [Cycas micronesica]
Length = 72
Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
+ S RR+ P+ + +ID+K++ +++F+S+RGKI+ R+S ++ K+QR + AIK
Sbjct: 1 KSKRSFRRRLPPIGSR--DQIDHKNMSSISQFISERGKILSGRVSRLTPKQQRLMTIAIK 58
Query: 71 RARYLGLIAYVN 82
RAR ++N
Sbjct: 59 RARIPSSSPFLN 70
>gi|145356574|ref|XP_001422503.1| Putative mitochondrial ribosomal protein S18 [Ostreococcus
lucimarinus CCE9901]
gi|144582746|gb|ABP00820.1| Putative mitochondrial ribosomal protein S18 [Ostreococcus
lucimarinus CCE9901]
Length = 76
Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
Y+D R L +F+S GKI P R VS K QR++A+AIK AR +G++ Y +
Sbjct: 16 YEDARFLTQFVSDTGKIYPKRRLGVSAKAQRKIARAIKTARQMGILPYTS 65
>gi|297295998|ref|XP_002804733.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Macaca
mulatta]
Length = 144
Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K C L G +D+K+++LL++F+S G I + + KKQ+E+ KAIKR + +GL
Sbjct: 65 KKCILCG---KHVDFKNVQLLSQFISPFIGCICGRHKTGLCGKKQKEITKAIKRPQIIGL 121
Query: 78 IAYV 81
+
Sbjct: 122 MPVT 125
>gi|88608040|ref|YP_505962.1| ribosomal protein S18 [Neorickettsia sennetsu str. Miyayama]
gi|123763737|sp|Q2GEY4|RS18_NEOSM RecName: Full=30S ribosomal protein S18
gi|88600209|gb|ABD45677.1| ribosomal protein S18 [Neorickettsia sennetsu str. Miyayama]
Length = 73
Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 27 GAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ L+ RF++ G+++ R + +S KKQR++AK +++ ++L L+ Y +
Sbjct: 15 KIEDFDYKNVALIKRFMTPVGRVLSRRATGLSAKKQRKMAKEVRKMKFLALVPYCD 70
>gi|41179036|ref|NP_958392.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|18201981|sp|O20032|RR18_CHLRE RecName: Full=30S ribosomal protein S18, chloroplastic
gi|2598288|emb|CAA74009.1| 30S ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|28269759|tpg|DAA00937.1| TPA_inf: ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|213517418|gb|ACJ50124.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
Length = 137
Score = 73.8 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 78 YIDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRFVAKTIKTARVMGLLPFVS 130
>gi|294055967|ref|YP_003549625.1| ribosomal protein S18 [Coraliomargarita akajimensis DSM 45221]
gi|293615300|gb|ADE55455.1| ribosomal protein S18 [Coraliomargarita akajimensis DSM 45221]
Length = 65
Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
Y D+ L+RF+++ GKI+P +++ +S K QR + IKRAR +
Sbjct: 19 YLDVEQLSRFVTETGKILPRKVTGLSAKHQRRVTNQIKRARNM 61
>gi|110456660|gb|ABG74779.1| ribosomal protein S18 [Jasminum leratii]
Length = 143
Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
K I + + LLNRF+SQRGKI+ +++ ++ K+QR + AIK+AR L L+ +V
Sbjct: 32 KSGDEIFFINTSLLNRFISQRGKILSRKVTRLTLKQQRLMTSAIKQARILSLLPFV 87
>gi|255573810|ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223532748|gb|EEF34527.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 258
Score = 73.4 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R + + + + D++++R L+ F+++ G + + +S K QR++A+ IK
Sbjct: 148 RKPPKRYEFQVTTEEVLEKADFRNVRFLSNFITEAGIMHKRSKTKISAKAQRKVAREIKT 207
Query: 72 ARYLGLIAYVNL 83
AR GL+ + +
Sbjct: 208 ARAFGLMPFTTM 219
>gi|323148839|ref|YP_004221932.1| ribosomal protein S18 [Erodium carvifolium]
gi|316926303|gb|ADU58156.1| ribosomal protein S18 [Erodium carvifolium]
Length = 106
Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 41/55 (74%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+ +I Y++I L++RF+S++G+I+ R++ ++ K+QR L+ AIK+AR L +A+
Sbjct: 22 QQGDQIHYRNISLISRFISKQGQILSRRVTRLTLKQQRLLSIAIKQARILSSLAF 76
>gi|57340086|gb|AAW50030.1| hypothetical protein FTT1061 [synthetic construct]
Length = 80
Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRIS 55
RRK C + +G IDYKD+ L ++++ GKIVPSR++
Sbjct: 29 RRKVCRFTVEGVKEIDYKDVNKLKAYITETGKIVPSRVT 67
>gi|261888174|gb|ACY06029.1| ribosomal protein S18 [Volvox carteri f. nagariensis]
Length = 137
Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYK LL R++ GKI+P R + ++ K+QR +AK IK AR +GL+ +V+
Sbjct: 79 IDYKHSGLLQRYIGLGGKILPRRQTRLTAKQQRYVAKTIKTARVMGLLPFVS 130
>gi|50308299|ref|XP_454151.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643286|emb|CAG99238.1| KLLA0E04555p [Kluyveromyces lactis]
Length = 155
Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
P + +D Y + L+RF++ GKI+ ++ +S K QR L KAIKR + +GL+
Sbjct: 78 FDPFNKLKINPLDLYTNPEFLSRFVTSTGKILHRDVTGLSAKNQRRLTKAIKRCQAIGLM 137
>gi|291000780|ref|XP_002682957.1| small subunit ribosomal protein S18 [Naegleria gruberi]
gi|284096585|gb|EFC50213.1| small subunit ribosomal protein S18 [Naegleria gruberi]
Length = 399
Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 13 NVSHRRKSCPLSGKG--APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R P +I YK+ LL +F+SQ G+I+P R + V + + + +K
Sbjct: 216 PQFKTRPPDPFGNNQHYIEKISYKNPSLLLKFVSQSGRIIPKRFTGVRRRTHKRIETEVK 275
Query: 71 RARYLGLIAYVN 82
+AR+LGL++Y
Sbjct: 276 KARFLGLLSYTG 287
>gi|71033085|ref|XP_766184.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353141|gb|EAN33901.1| hypothetical protein, conserved [Theileria parva]
Length = 378
Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ D+ +L+ F+SQ G+I+P RI+ + K+Q ++ KAIK AR L L Y N
Sbjct: 253 NNNKPFSFHDLHVLHNFISQDGQILPRRINMTTRKQQIQIFKAIKIARNLALFPYNN 309
>gi|310815618|ref|YP_003963582.1| ribosomal protein S18 [Ketogulonicigenium vulgare Y25]
gi|308754353|gb|ADO42282.1| ribosomal protein S18 [Ketogulonicigenium vulgare Y25]
Length = 65
Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ + RRKS P G+GAP IDYKD RLL R++S+RGKIVP+RI++VS
Sbjct: 1 MATKPFFRRRKSDPFEGEGAPVIDYKDTRLLQRYISERGKIVPARITAVSA 51
>gi|241653590|ref|XP_002410487.1| ribosomal protein S18C, putative [Ixodes scapularis]
gi|215501661|gb|EEC11155.1| ribosomal protein S18C, putative [Ixodes scapularis]
Length = 96
Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
+ C L +DYK+++LL++F+S GKI I+ + K+QR + I +
Sbjct: 4 PYQREGRKCILCKHNID-VDYKNVKLLSQFVSSYTGKIYEKHITGLCEKQQRRVKTEIFK 62
Query: 72 ARYLGLIAY 80
AR GL+ +
Sbjct: 63 ARKCGLMPH 71
>gi|223940174|ref|ZP_03632036.1| ribosomal protein S18 [bacterium Ellin514]
gi|223891191|gb|EEF57690.1| ribosomal protein S18 [bacterium Ellin514]
Length = 87
Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+D+K+ LL +F++ +G+I+P + + + QR+L ++IKRAR + L+
Sbjct: 36 IDALDFKNTNLLKQFVTDQGRILPRKYTGLPAHYQRQLNRSIKRARQMLLM 86
>gi|87311126|ref|ZP_01093250.1| 30S ribosomal protein S18 [Blastopirellula marina DSM 3645]
gi|87286217|gb|EAQ78127.1| 30S ribosomal protein S18 [Blastopirellula marina DSM 3645]
Length = 89
Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+DYKD+ LL + ++ G+IV R S + Q + +AIKRAR++ L+ YV
Sbjct: 36 FVDYKDVELLKKLTNRHGRIVGRRKSGCTAVSQHAVTQAIKRARFMALLPYV 87
>gi|197131542|gb|ACH47289.1| ribosomal protein S18 [Erodium chrysanthum]
Length = 111
Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRIS-SVSHKKQRELAKAIKRARYLGLIAY 80
+ +I Y +I L++RF+SQ+GKI+ R+ ++ ++QR LA AIK+AR L L+ +
Sbjct: 26 EKGDKIHYTNISLISRFISQQGKILSRRVKKGLTLQQQRRLAIAIKQARILSLLPF 81
>gi|15609192|ref|NP_216571.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Rv]
gi|15841544|ref|NP_336581.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31793238|ref|NP_855731.1| 30S ribosomal protein S18 [Mycobacterium bovis AF2122/97]
gi|121637941|ref|YP_978164.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661869|ref|YP_001283392.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148823271|ref|YP_001288025.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis F11]
gi|167966860|ref|ZP_02549137.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|215411753|ref|ZP_03420549.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 94_M4241A]
gi|215427427|ref|ZP_03425346.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T92]
gi|215430978|ref|ZP_03428897.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|215446273|ref|ZP_03433025.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|218753771|ref|ZP_03532567.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis GM 1503]
gi|219558023|ref|ZP_03537099.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T17]
gi|224990435|ref|YP_002645122.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798888|ref|YP_003031889.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
1435]
gi|254232225|ref|ZP_04925552.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis C]
gi|254364871|ref|ZP_04980917.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551082|ref|ZP_05141529.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187032|ref|ZP_05764506.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis CPHL_A]
gi|260201165|ref|ZP_05768656.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|260205340|ref|ZP_05772831.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis K85]
gi|289443558|ref|ZP_06433302.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289447675|ref|ZP_06437419.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CPHL_A]
gi|289554161|ref|ZP_06443371.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
605]
gi|289570166|ref|ZP_06450393.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T17]
gi|289574734|ref|ZP_06454961.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis K85]
gi|289750649|ref|ZP_06510027.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T92]
gi|289754165|ref|ZP_06513543.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|289758175|ref|ZP_06517553.1| ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|289762212|ref|ZP_06521590.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis GM
1503]
gi|294996994|ref|ZP_06802685.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 210]
gi|297634632|ref|ZP_06952412.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN 4207]
gi|297731619|ref|ZP_06960737.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN R506]
gi|298525558|ref|ZP_07012967.1| 30S ribosomal protein S18 2 [Mycobacterium tuberculosis
94_M4241A]
gi|306776293|ref|ZP_07414630.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu001]
gi|306780080|ref|ZP_07418417.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu002]
gi|306784826|ref|ZP_07423148.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu003]
gi|306789189|ref|ZP_07427511.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu004]
gi|306793522|ref|ZP_07431824.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu005]
gi|306797907|ref|ZP_07436209.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu006]
gi|306803784|ref|ZP_07440452.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu008]
gi|306808358|ref|ZP_07445026.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu007]
gi|306968181|ref|ZP_07480842.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu009]
gi|306972408|ref|ZP_07485069.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu010]
gi|307080115|ref|ZP_07489285.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu011]
gi|307084694|ref|ZP_07493807.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu012]
gi|313658953|ref|ZP_07815833.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis KZN V2475]
gi|54038989|sp|P66466|RS182_MYCBO RecName: Full=30S ribosomal protein S18 2
gi|54041925|sp|P66465|RS182_MYCTU RecName: Full=30S ribosomal protein S18 2
gi|205556550|sp|A1KKA1|RS182_MYCBP RecName: Full=30S ribosomal protein S18 2
gi|205556588|sp|A5U480|RS182_MYCTA RecName: Full=30S ribosomal protein S18 2
gi|3242285|emb|CAA17269.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium tuberculosis
H37Rv]
gi|13881790|gb|AAK46395.1| ribosomal protein S18 [Mycobacterium tuberculosis CDC1551]
gi|31618830|emb|CAD96934.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium bovis
AF2122/97]
gi|121493588|emb|CAL72062.1| Probable ribosomal protein S18 RpsR2 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124601284|gb|EAY60294.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis C]
gi|134150385|gb|EBA42430.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506021|gb|ABQ73830.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis H37Ra]
gi|148721798|gb|ABR06423.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis F11]
gi|224773548|dbj|BAH26354.1| 30S ribosomal protein S18 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320391|gb|ACT24994.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
1435]
gi|289416477|gb|EFD13717.1| SSU ribosomal protein S18 [Mycobacterium tuberculosis T46]
gi|289420633|gb|EFD17834.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CPHL_A]
gi|289438793|gb|EFD21286.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
605]
gi|289539165|gb|EFD43743.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis K85]
gi|289543920|gb|EFD47568.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T17]
gi|289691236|gb|EFD58665.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis T92]
gi|289694752|gb|EFD62181.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis EAS054]
gi|289709718|gb|EFD73734.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis GM
1503]
gi|289713739|gb|EFD77751.1| ribosomal protein S18 [Mycobacterium tuberculosis T85]
gi|298495352|gb|EFI30646.1| 30S ribosomal protein S18 2 [Mycobacterium tuberculosis
94_M4241A]
gi|308215248|gb|EFO74647.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu001]
gi|308326985|gb|EFP15836.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu002]
gi|308330420|gb|EFP19271.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu003]
gi|308334254|gb|EFP23105.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu004]
gi|308338055|gb|EFP26906.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu005]
gi|308341746|gb|EFP30597.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu006]
gi|308345232|gb|EFP34083.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu007]
gi|308349533|gb|EFP38384.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu008]
gi|308354164|gb|EFP43015.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu009]
gi|308358117|gb|EFP46968.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu010]
gi|308362043|gb|EFP50894.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu011]
gi|308365721|gb|EFP54572.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
SUMu012]
gi|323719350|gb|EGB28489.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
CDC1551A]
gi|326903668|gb|EGE50601.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
W-148]
gi|328458645|gb|AEB04068.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis KZN
4207]
Length = 88
Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + K L G +DYKD L F+S RGKI ++ ++ ++QR++A+AIK
Sbjct: 7 RKGPTKAKKNLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQAIKN 66
Query: 72 ARYLGLIAY 80
AR + L+ Y
Sbjct: 67 AREMALLPY 75
>gi|303287114|ref|XP_003062846.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455482|gb|EEH52785.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 92
Score = 71.4 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+D++D+++L+ F++ G+I+P R + V K QR++ +AIK AR + ++ +
Sbjct: 32 LDFRDVKVLSNFVTDTGRIIPRRKTGVRQKVQRKMNRAIKTARQMAIMPF 81
>gi|289745992|ref|ZP_06505370.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
02_1987]
gi|289686520|gb|EFD54008.1| 30S ribosomal protein S18 rpsR2 [Mycobacterium tuberculosis
02_1987]
Length = 90
Score = 71.4 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
+R + K L G +DYKD L F+S RGKI ++ ++ ++QR++A+A
Sbjct: 6 QIRAKGPTKAKKNLLDSLGVESVDYKDTATLRVFISDRGKIRSRGVTGLTVQQQRQVAQA 65
Query: 69 IKRARYLGLIAY 80
IK AR + L+ Y
Sbjct: 66 IKNAREMALLPY 77
>gi|242053025|ref|XP_002455658.1| hypothetical protein SORBIDRAFT_03g017560 [Sorghum bicolor]
gi|241927633|gb|EES00778.1| hypothetical protein SORBIDRAFT_03g017560 [Sorghum bicolor]
Length = 104
Score = 71.1 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ L+NRF+S++GKI+ RI+ ++ K+QR + AIK+AR L + + N
Sbjct: 1 MSLINRFISEQGKILSRRINRLTLKQQRLITVAIKQARILSFLPFRN 47
>gi|256075719|ref|XP_002574164.1| hypothetical protein [Schistosoma mansoni]
gi|238659362|emb|CAZ30397.1| conserved hypothetical protein [Schistosoma mansoni]
Length = 140
Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
RK C + K P +DYK++RLL++F+S G+I I+ + Q+ ++K I R
Sbjct: 55 PYRKTRKKCFICEKNIP-LDYKNVRLLSQFVSPYTGRIYGRHITGMCIPMQKRISKLIIR 113
Query: 72 ARYLGLIAY 80
+R G + +
Sbjct: 114 SRQFGFMPF 122
>gi|72165654|ref|XP_792269.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115955609|ref|XP_001183825.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 195
Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L P I YK+++LL++F+S G+I I+ + +QR + KA+KRA +G +
Sbjct: 80 CILCKYQVP-ISYKNVQLLSQFVSPNTGRIFGRHITKLCEAQQRRVTKAVKRAITMGFMP 138
>gi|260947332|ref|XP_002617963.1| hypothetical protein CLUG_01422 [Clavispora lusitaniae ATCC 42720]
gi|238847835|gb|EEQ37299.1| hypothetical protein CLUG_01422 [Clavispora lusitaniae ATCC 42720]
Length = 198
Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
G +D Y +L+RF+S G+I+P ++ + K Q++L AIKRAR +GL+
Sbjct: 127 FVRTGIDPLDLYSMPEILSRFVSSTGQILPREVTGCNAKNQKKLGIAIKRARSVGLL 183
>gi|42522507|ref|NP_967887.1| 30S ribosomal protein S18 [Bdellovibrio bacteriovorus HD100]
gi|81697891|sp|Q6MPB8|RS18_BDEBA RecName: Full=30S ribosomal protein S18
gi|39575039|emb|CAE78880.1| 30S ribosomal protein S18 [Bdellovibrio bacteriovorus HD100]
Length = 89
Score = 70.7 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
+ + + SG DYKD L RF+ GKI PSRIS +S +Q+ +A A+K+
Sbjct: 2 KKTTRSKYRQEFSGDHV--FDYKDPASLTRFIGDGGKITPSRISKLSVAQQKRVAAAVKK 59
Query: 72 ARYLGLIA 79
+R L L+
Sbjct: 60 SRNLALLP 67
>gi|187734608|ref|YP_001876720.1| ribosomal protein S18 [Akkermansia muciniphila ATCC BAA-835]
gi|187424660|gb|ACD03939.1| ribosomal protein S18 [Akkermansia muciniphila ATCC BAA-835]
Length = 81
Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+ L++F S+ GKI+P R++ +S K R++ + IKRAR + L+
Sbjct: 37 NPDFLSKFTSETGKILPRRVTGLSAKMHRKVTREIKRARSINLLP 81
>gi|315295745|ref|ZP_07872235.1| ribosomal protein S18 [Listeria ivanovii FSL F6-596]
gi|313630789|gb|EFR98527.1| ribosomal protein S18 [Listeria ivanovii FSL F6-596]
Length = 40
Score = 69.5 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 2 GKILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 36
>gi|226489048|emb|CAX74873.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489050|emb|CAX74874.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489052|emb|CAX74875.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489054|emb|CAX74876.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
Length = 142
Score = 69.5 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
+K C + K P +DYK++RLL++F+S G+I I+ + Q+ +++ I R
Sbjct: 55 PYLKPKKKCFICEKNIP-LDYKNVRLLSQFVSPYTGRIYGRHITGMCIPMQKRISQLITR 113
Query: 72 ARYLGLIAY 80
+R G + +
Sbjct: 114 SRQFGFMPF 122
>gi|296140975|ref|YP_003648218.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
gi|296029109|gb|ADG79879.1| ribosomal protein S18 [Tsukamurella paurometabola DSM 20162]
Length = 79
Score = 69.5 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK++ L FL++RGK+ ++ +S + QR LA A+K AR + L+ Y
Sbjct: 26 LDYKNVTYLRTFLNERGKLRSRAVTRLSPQDQRALALAVKNAREMALLPYAT 77
>gi|255710687|ref|XP_002551627.1| KLTH0A03938p [Lachancea thermotolerans]
gi|238933004|emb|CAR21185.1| KLTH0A03938p [Lachancea thermotolerans]
Length = 171
Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 23 LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
G +D Y + L++F++ GKI+ ++ +S K QR L+KAI+R + +GL+
Sbjct: 97 FDKNGVDPLDLYTNPEFLSQFVTSSGKILHRDVTGLSAKNQRRLSKAIRRCQAIGLM 153
>gi|32262086|gb|AAP77135.1| ribosomal protein S18 [Helicobacter hepaticus ATCC 51449]
Length = 59
Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+ +L LS+R KI+P R++ + + Q + AIKRAR++ LI Y+
Sbjct: 1 MEMLKHSLSERYKIMPRRLTGNTKRWQERVEVAIKRARHMALIPYI 46
>gi|115443553|ref|YP_778572.1| 50S ribosomal protein S18 [Bigelowiella natans]
gi|122227450|sp|Q06J55|RR18_BIGNA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|110810198|gb|ABG91404.1| 50S ribosomal protein S18 [Bigelowiella natans]
Length = 64
Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+DYK+ LL +F+S GKI+P I+ + K QR+L+KAIK +R GL+ ++N
Sbjct: 12 LDYKNTNLLKKFVSVDGKILPKYITVLKPKNQRKLSKAIKLSRIAGLLKFLN 63
>gi|195055805|ref|XP_001994803.1| GH14032 [Drosophila grimshawi]
gi|193892566|gb|EDV91432.1| GH14032 [Drosophila grimshawi]
Length = 357
Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
AE + R+ C L YK+++LL++F S G+I I+ + +
Sbjct: 254 AESDEPIEMANPFEKDRQECILCKHNIVP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKQ 312
Query: 61 KQRELAKAIKRARYLGLIA 79
KQ + +AI RA++ L+
Sbjct: 313 KQEHVEQAILRAQHCLLMP 331
>gi|224179453|ref|YP_002600865.1| ribosomal protein S18 [Pycnococcus provasolii]
gi|217314496|gb|ACK36838.1| ribosomal protein S18 [Pycnococcus provasolii]
Length = 64
Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
IDYK +RLL R + G+I+P R+ V ++Q +LA++IKRAR L L+ +V
Sbjct: 10 IDYKSVRLLRRCIGSDGRILPRRVLQVPVRQQAKLARSIKRARILALLPFV 60
>gi|281209273|gb|EFA83446.1| hypothetical protein PPL_03594 [Polysphondylium pallidum PN500]
Length = 435
Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 3 EVAPTPLLRRNVSHRRKS--CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+V +P + V +K C L +++ ++ LL+ +L+ G I+P I+ K
Sbjct: 263 QVTRSPTTGKEVVGNKKFPKCLLCFDYGWKVEPMNVPLLSIYLNNDGDILPRYITGNCLK 322
Query: 61 KQRELAKAIKRARYLGLIAY 80
Q+++A+ IK+A++LGL +Y
Sbjct: 323 HQKKIARTIKQAKHLGLYSY 342
>gi|46237662|emb|CAE84037.1| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|187469104|gb|AAI66875.1| Mitochondrial ribosomal protein S18B [Rattus norvegicus]
Length = 253
Score = 68.0 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R+ K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 84 PQRTRKTCIRKDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 143
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 144 HKKLTQAIQKAREYGLLSY 162
>gi|209732018|gb|ACI66878.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|209737816|gb|ACI69777.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|303666223|gb|ADM16221.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
Length = 244
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ I Y++++LL +F+S G + S + V K+Q++L +AI AR GL+
Sbjct: 124 CPICRDSNVIIHYQNVKLLQQFISPNTGIVYDSTRTGVCQKQQKQLNQAIGTARDHGLLP 183
Query: 80 Y 80
+
Sbjct: 184 F 184
>gi|261399864|ref|NP_997699.2| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|149031788|gb|EDL86723.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Rattus
norvegicus]
Length = 257
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R+ K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 88 PQRTRKTCIRKDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 147
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 148 HKKLTQAIQKAREYGLLSY 166
>gi|196230313|ref|ZP_03129176.1| ribosomal protein S18 [Chthoniobacter flavus Ellin428]
gi|196225910|gb|EDY20417.1| ribosomal protein S18 [Chthoniobacter flavus Ellin428]
Length = 79
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGA--PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQR 63
TP R N + P +DYK+ +L +F+++ GKI+P R++ + R
Sbjct: 4 KTPQRRSNFRKANRIMPRRRIDIALEALDYKNPDILKKFVTESGKILPRRLTGMPAHFHR 63
Query: 64 ELAKAIKRARYLGLI 78
++ + IKRAR + L+
Sbjct: 64 KITREIKRARAVLLM 78
>gi|255575892|ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223531694|gb|EEF33517.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 271
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R + + + + D +++R L+ F+++ G + + +S K QR++A IK
Sbjct: 161 RKPPKRYEFQVTTEEVLEKADSRNVRFLSNFITEAGIMHKRSKTKISAKAQRKVAGEIKT 220
Query: 72 ARYLGLIAYVNL 83
AR GL+ + +
Sbjct: 221 ARAFGLMPFTTM 232
>gi|74188911|dbj|BAE39228.1| unnamed protein product [Mus musculus]
Length = 254
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 85 PQRTRKTCIRNNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 144
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 145 HKKLTQAIQKARECGLLSY 163
>gi|23956152|ref|NP_080154.1| 28S ribosomal protein S18b, mitochondrial precursor [Mus musculus]
gi|24212195|sp|Q99N84|RT18B_MOUSE RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|13620909|dbj|BAB41007.1| mitochondrial ribosomal protein S18b [Mus musculus]
gi|18256035|gb|AAH21752.1| Mitochondrial ribosomal protein S18B [Mus musculus]
gi|74151554|dbj|BAE38883.1| unnamed protein product [Mus musculus]
gi|148691310|gb|EDL23257.1| mitochondrial ribosomal protein S18B, isoform CRA_d [Mus musculus]
Length = 254
Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 85 PQRTRKTCIRNNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 144
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 145 HKKLTQAIQKARECGLLSY 163
>gi|238879098|gb|EEQ42736.1| hypothetical protein CAWG_00957 [Candida albicans WO-1]
Length = 200
Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKD----IRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ ++ S ++ S P G ID K+ +L++FL+ G+I+P +++ + K Q+
Sbjct: 115 MEKKMKSTKKLSDPFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRQVTGCNAKNQKR 171
Query: 65 LAKAIKRARYLGLI 78
L+ AI+ AR LGL+
Sbjct: 172 LSMAIEYARSLGLL 185
>gi|68491581|ref|XP_710420.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|68491604|ref|XP_710409.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|46431603|gb|EAK91147.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
gi|46431615|gb|EAK91158.1| likely mitochondrial ribosomal protein S18 [Candida albicans
SC5314]
Length = 200
Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKD----IRLLNRFLSQRGKIVPSRISSVSHKKQRE 64
+ ++ S ++ S P G ID K+ +L++FL+ G+I+P +++ + K Q+
Sbjct: 115 MEKKMKSTKKLSDPFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRQVTGCNAKNQKR 171
Query: 65 LAKAIKRARYLGLI 78
L+ AI+ AR LGL+
Sbjct: 172 LSMAIEYARSLGLL 185
>gi|11465581|ref|NP_045027.1| ribosomal protein S18 [Cyanidium caldarium]
gi|14285759|sp|Q9TM39|RR18_CYACA RecName: Full=30S ribosomal protein S18, chloroplastic
gi|6466437|gb|AAF13018.1|AF022186_192 unknown [Cyanidium caldarium]
Length = 68
Score = 67.2 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
K + I+YK L+ F+S RGKI+P RI+ + KK + + KAIK+AR +GL+ +
Sbjct: 9 KDSKAINYKTTDLIREFISDRGKIIPQRITKSTRKKHKLIEKAIKQARLIGLMPF 63
>gi|156087046|ref|XP_001610930.1| ribosomal protein S18 [Babesia bovis T2Bo]
gi|154798183|gb|EDO07362.1| ribosomal protein S18, putative [Babesia bovis]
Length = 336
Score = 67.2 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++D+ +L+ F+++ G+I+P R++ + ++QR++ +AI+ AR + L Y
Sbjct: 203 ENNKRPFSFRDLHVLHNFVAENGQILPRRLTYATRQQQRQIFRAIRVARQMALFPY 258
>gi|311262875|ref|XP_003129404.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Sus
scrofa]
Length = 166
Score = 66.8 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 33 YKDIR-----LLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
YK + LL++F+S G I I+ + KKQ+E+ KAIKRA+ LG +
Sbjct: 93 YKQVASNEDLLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGFMPVT 147
>gi|153791409|ref|NP_001093290.1| mitochondrial 28S ribosomal protein S18c [Bombyx mori]
gi|129562655|gb|ABO31093.1| mitochondrial 28S ribosomal protein S18c [Bombyx mori]
Length = 137
Score = 66.8 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+ K C L DYK+ RLL++F S G+I P I+ + +KQ ++ +
Sbjct: 42 MENPFKKELKQCILCKLNIDP-DYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQE 100
Query: 69 IKRARYLGLIAYV 81
I +A+ + Y
Sbjct: 101 ITKAQDFAYMPYT 113
>gi|189219027|ref|YP_001939668.1| ribosomal protein S18 [Methylacidiphilum infernorum V4]
gi|189185885|gb|ACD83070.1| Ribosomal protein S18 [Methylacidiphilum infernorum V4]
Length = 83
Score = 66.8 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 28 APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
A ID++++ LL R++++ G+I+P RI+ + K R L+K IK+AR + L+
Sbjct: 32 AEAIDFRNVELLKRYVTENGRILPRRITGLPAKLHRLLSKEIKKARNVLLM 82
>gi|260828289|ref|XP_002609096.1| hypothetical protein BRAFLDRAFT_126128 [Branchiostoma floridae]
gi|229294450|gb|EEN65106.1| hypothetical protein BRAFLDRAFT_126128 [Branchiostoma floridae]
Length = 123
Score = 66.4 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRE 64
P + K C L + YK+ +LL++FLS G+I I+ + KKQ E
Sbjct: 2 PQRRMEDPYKEEVKRCILCN---VELSYKNPQLLSQFLSPYTGRIYGQHITGLCDKKQEE 58
Query: 65 LAKAIKRARYLGLIA 79
+ K IK A++LG +
Sbjct: 59 VEKQIKNAQHLGFLP 73
>gi|11467022|ref|NP_041929.1| ribosomal protein S18 [Euglena gracilis]
gi|266968|sp|P30390|RR18_EUGGR RecName: Full=30S ribosomal protein S18, chloroplastic
gi|14383|emb|CAA77933.1| ribosomal protein S18 [Euglena gracilis]
gi|415772|emb|CAA50116.1| 30S ribosomal protein S18 [Euglena gracilis]
Length = 64
Score = 66.4 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRIS--SVSHKKQRELAKAIKRARYLGLIAY 80
IDYK++ +L RF++ +GKI+P R++ +++K+ R L K++K+ARYLGL+ +
Sbjct: 7 IDYKNVNILRRFINFQGKIIPKRLNKPKLTYKQHRLLRKSVKQARYLGLLPF 58
>gi|197131544|gb|ACH47290.1| ribosomal protein S18 [Erodium texanum]
Length = 175
Score = 66.4 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
S RR+ P++ + ++YK++ ++++F+S++GKI+P + + KKQ + +A+K+AR
Sbjct: 17 RSFRRRLPPITPE--ELLNYKNVSVISQFISKQGKILPRWVKGLKKKKQDLVKRAVKQAR 74
Query: 74 YLGLIAY 80
L L+ +
Sbjct: 75 LLALLYF 81
>gi|309322078|ref|YP_003933895.1| ribosomal protein S18 [Erodium texanum]
gi|300069171|gb|ADJ66293.1| ribosomal protein S18 [Erodium texanum]
Length = 175
Score = 66.4 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 14 VSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
S RR+ P++ + ++YK++ ++++F+S++GKI+P + + KKQ + +A+K+AR
Sbjct: 17 RSFRRRLPPITPE--ELLNYKNVSVISQFISKQGKILPRWVKGLKKKKQDLVKRAVKQAR 74
Query: 74 YLGLIAY 80
L L+ +
Sbjct: 75 LLALLYF 81
>gi|298712822|emb|CBJ48787.1| putative 30S ribosomal protein S18 [Ectocarpus siliculosus]
Length = 400
Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 8 PLLRRNVSHRRKSCPLSGKG-------APRIDYK-----DIRLLNRFLSQRGKIVPSRIS 55
P R HR CP +G D K LL RF++ G I+ +
Sbjct: 268 PFDHRGRFHR---CPGKKQGKAALPSTCQIFDVKELHVNHTPLLKRFVNDAGMILGRYRT 324
Query: 56 SVSHKKQRELAKAIKRARYLGLIAYVN 82
+ K QR++A +K AR +GL+ V+
Sbjct: 325 GLCAKCQRKVAHTVKAARQMGLVPTVS 351
>gi|148691308|gb|EDL23255.1| mitochondrial ribosomal protein S18B, isoform CRA_b [Mus musculus]
Length = 204
Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 85 PQRTRKTCIRNNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 144
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 145 HKKLTQAIQKARECGLLSY 163
>gi|171914513|ref|ZP_02929983.1| 30S ribosomal protein S18 [Verrucomicrobium spinosum DSM 4136]
Length = 79
Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + RR +++YK +L +F ++ GKI+P R++ VS R + + IK
Sbjct: 16 NRKLPRRRM-----DIPMDKLNYKHPEILAKFATETGKILPRRVTGVSAYVHRTITREIK 70
Query: 71 RARYLGLIA 79
RAR L L+
Sbjct: 71 RARSLNLMP 79
>gi|6683344|dbj|BAA89131.1| ribosomal protein S18 [Pinus krempfii]
gi|6683347|dbj|BAA89133.1| ribosomal protein S18 [Pinus cembra]
gi|6683350|dbj|BAA89135.1| ribosomal protein S18 [Pinus pumila]
gi|6683353|dbj|BAA89137.1| ribosomal protein S18 [Pinus koraiensis]
gi|6683356|dbj|BAA89139.1| ribosomal protein S18 [Pinus strobus]
gi|6683359|dbj|BAA89141.1| ribosomal protein S18 [Pinus monticola]
gi|6683362|dbj|BAA89143.1| ribosomal protein S18 [Pinus parviflora]
gi|6683365|dbj|BAA89145.1| ribosomal protein S18 [Pinus wallichiana]
gi|6683368|dbj|BAA89147.1| ribosomal protein S18 [Pinus kwangtungensis]
gi|6683371|dbj|BAA89149.1| ribosomal protein S18 [Pinus peuce]
gi|6683374|dbj|BAA89151.1| ribosomal protein S18 [Pinus armandii]
gi|6683377|dbj|BAA89153.1| ribosomal protein S18 [Pinus aristata]
gi|6683380|dbj|BAA89155.1| ribosomal protein S18 [Pinus balfouriana]
gi|6683383|dbj|BAA89157.1| ribosomal protein S18 [Pinus gerardiana]
gi|6683386|dbj|BAA89159.1| ribosomal protein S18 [Pinus bungeana]
gi|6683389|dbj|BAA89161.1| ribosomal protein S18 [Pinus sylvestris]
gi|6683392|dbj|BAA89163.1| ribosomal protein S18 [Pinus tabuliformis]
gi|6683395|dbj|BAA89165.1| ribosomal protein S18 [Pinus merkusii]
gi|6683398|dbj|BAA89167.1| ribosomal protein S18 [Pinus hwangshanensis]
gi|6683401|dbj|BAA89169.1| ribosomal protein S18 [Pinus kesiya]
gi|6683404|dbj|BAA89171.1| ribosomal protein S18 [Pinus densiflora]
gi|6683407|dbj|BAA89173.1| ribosomal protein S18 [Pinus massoniana]
gi|6683410|dbj|BAA89175.1| ribosomal protein S18 [Pinus yunnanensis]
gi|6683413|dbj|BAA89177.1| ribosomal protein S18 [Pinus nigra]
gi|6683416|dbj|BAA89179.1| ribosomal protein S18 [Pinus pinaster]
gi|6683419|dbj|BAA89181.1| ribosomal protein S18 [Pinus halepensis]
gi|6683422|dbj|BAA89183.1| ribosomal protein S18 [Pinus brutia]
gi|6683425|dbj|BAA89185.1| ribosomal protein S18 [Pinus heldreichii]
gi|6683428|dbj|BAA89187.1| ribosomal protein S18 [Pinus pinea]
gi|6683431|dbj|BAA89189.1| ribosomal protein S18 [Pinus canariensis]
gi|6683434|dbj|BAA89191.1| ribosomal protein S18 [Pinus roxburghii]
gi|6683440|dbj|BAA89195.1| ribosomal protein S18 [Larix decidua]
gi|6683443|dbj|BAA89197.1| ribosomal protein S18 [Abies numidica]
gi|6683446|dbj|BAA89199.1| ribosomal protein S18 [Keteleeria davidiana]
gi|6683449|dbj|BAA89201.1| ribosomal protein S18 [Pseudolarix amabilis]
gi|6683452|dbj|BAA89203.1| ribosomal protein S18 [Cathaya argyrophylla]
gi|121807668|gb|ABM65544.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807671|gb|ABM65546.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807674|gb|ABM65548.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807677|gb|ABM65550.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807680|gb|ABM65552.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807683|gb|ABM65554.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807695|gb|ABM65562.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807698|gb|ABM65564.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807701|gb|ABM65566.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807704|gb|ABM65568.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807707|gb|ABM65570.1| ribosomal protein S18 [Pinus longaeva]
gi|169823070|gb|ACA96716.1| ribosomal protein S18 [Pinus tabuliformis var. henryi]
Length = 43
Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 ISEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|313635426|gb|EFS01683.1| 30S ribosomal protein S18 [Listeria seeligeri FSL N1-067]
Length = 45
Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVP 51
+K C + G IDYKD+ LL +F+S+RGKI+P
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKILP 45
>gi|121807686|gb|ABM65556.1| ribosomal protein S18 [Pinus balfouriana]
gi|121807689|gb|ABM65558.1| ribosomal protein S18 [Pinus balfouriana]
Length = 43
Score = 66.1 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 VSEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|255730997|ref|XP_002550423.1| hypothetical protein CTRG_04721 [Candida tropicalis MYA-3404]
gi|240132380|gb|EER31938.1| hypothetical protein CTRG_04721 [Candida tropicalis MYA-3404]
Length = 196
Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 9 LLRRNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
+ ++ + ++ P + G + Y +L++FL+ G+I+ ++ S + Q++LA
Sbjct: 111 MEQKAKNKKKLVDPFAKSGIDPKTLYLMPEILSKFLTSTGQILSRDVTGCSAENQKKLAM 170
Query: 68 AIKRARYLGLI 78
AIK AR LGL+
Sbjct: 171 AIKYARSLGLL 181
>gi|315273287|ref|ZP_07869272.1| ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|313616095|gb|EFR89226.1| ribosomal protein S18 [Listeria marthii FSL S4-120]
Length = 38
Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 48 KIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
KI+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 1 KILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 34
>gi|281337509|gb|EFB13093.1| hypothetical protein PANDA_018965 [Ailuropoda melanoleuca]
Length = 232
Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R RR K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 61 PQRTRKTCIRRDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQ 120
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 121 HKKLTQAIQKARDHGLLSY 139
>gi|313621542|gb|EFR92400.1| ribosomal protein S18 [Listeria innocua FSL S4-378]
Length = 40
Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 49 IVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
I+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 4 ILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 36
>gi|84370073|ref|NP_001033613.1| 28S ribosomal protein S18b, mitochondrial [Bos taurus]
gi|83638632|gb|AAI09914.1| Mitochondrial ribosomal protein S18B [Bos taurus]
Length = 258
Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R + R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKMCIRGNKVAGNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTQAIQKARDHGLLSY 165
>gi|197131554|gb|ACH47295.1| ribosomal protein S18 [Sarcocaulon vanderietiae]
Length = 221
Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R++ + + +I Y++I L++RF+SQ G+I+ +++ V+ K+QR L AIK+AR L
Sbjct: 31 RQRLPRI--QQQDKIHYRNISLISRFISQHGQILSRKVNRVTLKQQRLLTIAIKQARILY 88
Query: 77 LIAY 80
L+ +
Sbjct: 89 LVPF 92
>gi|108935897|sp|P82918|RT18B_BOVIN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2
Length = 258
Score = 65.3 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R + R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKMCIRGNKVAGNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTQAIQKARDHGLLSY 165
>gi|30314948|gb|AAP30724.1| ribosomal protein S18 [Pinus squamata]
Length = 43
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
LS++GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 LSEQGKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|241948719|ref|XP_002417082.1| unnamed protein product [Candida dubliniensis CD36]
gi|223640420|emb|CAX44672.1| unnamed protein product [Candida dubliniensis CD36]
Length = 196
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 22 PLSGKGAPRIDYKD----IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
P G ID K+ +L++FL+ G+I+P ++ + K Q+ L+ AI+ AR LGL
Sbjct: 124 PFEKSG---IDPKNLYLMPEILSKFLTSTGQILPRHLTGCNAKNQKRLSMAIEYARSLGL 180
Query: 78 I 78
+
Sbjct: 181 L 181
>gi|119931099|ref|XP_001250820.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Bos
taurus]
gi|296474243|gb|DAA16358.1| 28S ribosomal protein S18b, mitochondrial [Bos taurus]
Length = 258
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R + R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKMCIRGNKVAGNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTQAIQKARDHGLLSY 165
>gi|301786981|ref|XP_002928904.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 258
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R RR K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKTCIRRDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTQAIQKARDHGLLSY 165
>gi|28200287|gb|AAO31775.1| mitochondrial ribosomal protein S18C [Branchiostoma belcheri
tsingtauense]
Length = 179
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRE 64
P + K C L + YK+ +LL++FLS G+I I+ + KKQ E
Sbjct: 58 PQRQMEDPYKEEVKRCILCN---VELSYKNPQLLSQFLSPYTGRIYGHHITGLCDKKQAE 114
Query: 65 LAKAIKRARYLGLIA 79
+ + I+ A+YLG +
Sbjct: 115 VERQIRNAQYLGFLP 129
>gi|119626344|gb|EAX05939.1| mitochondrial ribosomal protein S18C, isoform CRA_c [Homo
sapiens]
Length = 114
Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 38 LLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
LL++F+S G I I+ + KKQ+E+ KAIKRA+ +G +
Sbjct: 51 LLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVT 95
>gi|323453258|gb|EGB09130.1| hypothetical protein AURANDRAFT_63679 [Aureococcus anophagefferens]
Length = 301
Score = 64.9 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++ L F+S G I S + K QR++ +AIKRAR LGL+ +
Sbjct: 231 NLPALAEFVSDAGMIQKRDQSRLCAKYQRKVKRAIKRARQLGLVPF 276
>gi|315041276|ref|XP_003170015.1| hypothetical protein MGYG_08194 [Arthroderma gypseum CBS 118893]
gi|311345977|gb|EFR05180.1| hypothetical protein MGYG_08194 [Arthroderma gypseum CBS 118893]
Length = 179
Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + +D YK+ +++ ++S+ G+I +R + +
Sbjct: 87 DLSPAEMKKWKKRRNPTTDIFDALSLNPLDMYKNPAVMSEYVSETGRIKSARETGLRRIN 146
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+L+KAI+RA +GL+ V+
Sbjct: 147 QRKLSKAIRRAVSMGLMPSVH 167
>gi|170033796|ref|XP_001844762.1| ubiquitin fusion degradation protein 2 [Culex quinquefasciatus]
gi|167874839|gb|EDS38222.1| ubiquitin fusion degradation protein 2 [Culex quinquefasciatus]
Length = 484
Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQR 63
+P L + R C L DYK+++LL++F S G+I I+ + +Q
Sbjct: 384 SPVELGENPFAKERVQCILCKHNVTP-DYKNVQLLSQFQSPYTGRIYGKHITGLCKARQE 442
Query: 64 ELAKAIKRARYLGLIA 79
++ + I +A+ GL+
Sbjct: 443 QVEREIIKAQNAGLMP 458
>gi|73972105|ref|XP_532057.2| PREDICTED: similar to 28S ribosomal protein S18b, mitochondrial
precursor (MRP-S18-b) (Mrps18b) (MRP-S18-2) isoform 1
[Canis familiaris]
Length = 257
Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R RR K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKTCIRRDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTQAIQKARDHGLLSY 165
>gi|257042646|gb|ACV32916.1| ribosomal protein S18 [Pinus monticola]
Length = 93
Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 TPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
P+ R RR P+ + RIDYK++ L++RF+S++GKI+ R
Sbjct: 17 KPIRRHLKPIRRHLSPI--RSGDRIDYKNMSLISRFISEQGKILSXRXXXXXXXXXXXXT 74
Query: 67 KAIKRARYLGLIAYV 81
AIKRAR L L+ ++
Sbjct: 75 NAIKRARILSLLPFL 89
>gi|74207728|dbj|BAE40107.1| unnamed protein product [Mus musculus]
Length = 254
Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-KS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K C + +D+++++LL +F+ + G I + + V K+
Sbjct: 85 PQRTRKTCIRNNKVAGNPCTICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 144
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 145 HKKLTQAIQKARECGLLSY 163
>gi|73972107|ref|XP_856628.1| PREDICTED: similar to 28S ribosomal protein S18b, mitochondrial
precursor (MRP-S18-b) (Mrps18b) (MRP-S18-2) isoform 2
[Canis familiaris]
Length = 170
Score = 64.1 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 16 HRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIK 70
R K CP+ +D+++++LL +F+ + G I + + V K+ ++L +AI+
Sbjct: 9 RRDKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQ 68
Query: 71 RARYLGLIAY 80
+AR GL++Y
Sbjct: 69 KARDHGLLSY 78
>gi|296197608|ref|XP_002746355.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Callithrix jacchus]
Length = 258
Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I + + V ++
Sbjct: 87 PQRTRKTCIRGNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMRQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
+ L +AI++AR LGL++Y
Sbjct: 147 HKRLTQAIQKARDLGLLSY 165
>gi|92087050|ref|NP_001035204.1| 28S ribosomal protein S18b, mitochondrial precursor [Pan
troglodytes]
gi|115311862|sp|Q1XHY1|RT18B_PANTR RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|90960878|dbj|BAE92787.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|90960881|dbj|BAE92789.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
Length = 258
Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQREL 65
R+ R K CP+ +D+++++LL +F+ + G I + + V K+ + L
Sbjct: 91 RKTCIRRNKVVGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRL 150
Query: 66 AKAIKRARYLGLIAY 80
+AI++AR GL+ Y
Sbjct: 151 TQAIQKARDHGLLIY 165
>gi|332245892|ref|XP_003272085.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Nomascus
leucogenys]
Length = 258
Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQREL 65
R+ R K CP+ +D+++++LL +F+ + G I + + V K+ + L
Sbjct: 91 RKTCIRRNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRL 150
Query: 66 AKAIKRARYLGLIAY 80
+AI++AR GL+ Y
Sbjct: 151 TQAIQKARDHGLLIY 165
>gi|7662645|ref|NP_054765.1| 28S ribosomal protein S18b, mitochondrial precursor [Homo sapiens]
gi|24212203|sp|Q9Y676|RT18B_HUMAN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|7106756|gb|AAF36103.1|AF151017_1 HSPC183 [Homo sapiens]
gi|5410308|gb|AAD43025.1| PTD017 [Homo sapiens]
gi|46091141|dbj|BAD13699.1| MRPS18B protein [Homo sapiens]
gi|46091143|dbj|BAD13700.1| MRPS18B protein [Homo sapiens]
gi|52545522|emb|CAH56415.1| hypothetical protein [Homo sapiens]
gi|55961380|emb|CAI17840.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|55962484|emb|CAI17765.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|56207230|emb|CAI18569.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|57209799|emb|CAI41878.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|86197951|dbj|BAE78614.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|119623709|gb|EAX03304.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Homo sapiens]
gi|123269908|emb|CAI18162.2| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|123297237|emb|CAM25911.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|162417647|emb|CAP58452.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|168984942|emb|CAQ07411.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|168985991|emb|CAQ09404.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|189053209|dbj|BAG34831.1| unnamed protein product [Homo sapiens]
gi|208966778|dbj|BAG73403.1| mitochondrial ribosomal protein S18B [synthetic construct]
Length = 258
Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQREL 65
R+ R K CP+ +D+++++LL +F+ + G I + + V K+ + L
Sbjct: 91 RKTCIRRNKVVGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRL 150
Query: 66 AKAIKRARYLGLIAY 80
+AI++AR GL+ Y
Sbjct: 151 TQAIQKARDHGLLIY 165
>gi|302824491|ref|XP_002993888.1| hypothetical protein SELMODRAFT_9213 [Selaginella moellendorffii]
gi|300138255|gb|EFJ05029.1| hypothetical protein SELMODRAFT_9213 [Selaginella moellendorffii]
Length = 80
Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 14 VSHRRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+S R++ P G +D+K+ L RFLS+RGKI+ +++ + K+QR + A KRA
Sbjct: 6 LSSRKRLLPSVVGGLGETVDHKNTSLPRRFLSKRGKILSKQMNRSTSKQQRFMTTAAKRA 65
Query: 73 RYLGLIA 79
R L
Sbjct: 66 RISALSP 72
>gi|296399224|gb|ADH10399.1| ribosomal protein S18 [Selaginella moellendorffii]
Length = 79
Score = 64.1 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 14 VSHRRKSCPLSGKG-APRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
+S R++ P G +D+K+ L RFLS+RGKI+ +++ + K+QR + A KRA
Sbjct: 6 LSSRKRLLPSVVGGLGETVDHKNTSLPRRFLSKRGKILSKQMNRSTSKQQRFMTTAAKRA 65
Query: 73 RYLGLIA 79
R L
Sbjct: 66 RISALSP 72
>gi|13529221|gb|AAH05373.1| Mitochondrial ribosomal protein S18B [Homo sapiens]
Length = 258
Score = 64.1 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQREL 65
R+ R K CP+ +D+++++LL +F+ + G I + + V K+ + L
Sbjct: 91 RKTCIRRNKVVGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRL 150
Query: 66 AKAIKRARYLGLIAY 80
+AI++AR GL+ Y
Sbjct: 151 TQAIQKARDHGLLIY 165
>gi|194905489|ref|XP_001981206.1| GG11748 [Drosophila erecta]
gi|190655844|gb|EDV53076.1| GG11748 [Drosophila erecta]
Length = 140
Score = 64.1 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
+ C L G YK+++LL++F S G+I I+ + ++Q ++ +AI R
Sbjct: 48 PYEKEPQQCILCKHGIEP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILR 106
Query: 72 ARYLGLIA 79
A++ L+
Sbjct: 107 AQHCLLMP 114
>gi|121807692|gb|ABM65560.1| ribosomal protein S18 [Pinus balfouriana]
Length = 43
Score = 63.7 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++G+I+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 ISEQGRILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 39
>gi|283794886|ref|YP_003359239.1| ribosomal protein S18 [Cryptomonas paramecium]
gi|253981858|gb|ACT46775.1| ribosomal protein S18 [Cryptomonas paramecium]
Length = 69
Score = 63.7 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R R+ PL + I Y+ LL FL+ +GKIVP +S V+ K+QR+++KAIK
Sbjct: 3 RKYKFPRRFLPLDQE----ISYRSFELLVSFLTSQGKIVPRSVSRVTLKQQRKISKAIKT 58
Query: 72 ARYLGLI 78
AR L ++
Sbjct: 59 ARSLKVL 65
>gi|242023330|ref|XP_002432087.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517461|gb|EEB19349.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 143
Score = 63.7 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAK 67
++ + C L D++++RLL++F+S+ GK+ I+ + KQ+++ K
Sbjct: 46 QMKNPYEKEKPKCILCKYNITP-DFRNVRLLSQFISRHTGKVYGRHITGLCEHKQKQVEK 104
Query: 68 AIKRAR 73
I +AR
Sbjct: 105 EIIKAR 110
>gi|149244928|ref|XP_001527007.1| hypothetical protein LELG_01836 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449401|gb|EDK43657.1| hypothetical protein LELG_01836 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 215
Score = 63.7 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 13 NVSHRRKSCPLSGK--GAPRID----YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
V R+ + +ID Y +L++F++ G+I+ ++ +S QR+LA
Sbjct: 129 EVKERQSRPRFASDIFRQTKIDPRNLYLMPEVLSKFITSSGQIMSRDMTGLSSGNQRKLA 188
Query: 67 KAIKRARYLGLIAYVN 82
AIK AR LGL++ V+
Sbjct: 189 AAIKTARSLGLLSTVH 204
>gi|313611704|gb|EFR86247.1| ribosomal protein S18 [Listeria monocytogenes FSL F2-208]
Length = 45
Score = 63.7 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 49 IVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 9 VLPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 41
>gi|149754681|ref|XP_001491860.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S18-2
(MRP-S18-2) (Mrps18b) [Equus caballus]
Length = 258
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKTCIRGNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL++Y
Sbjct: 147 HKKLTEAIQKARDHGLLSY 165
>gi|156371103|ref|XP_001628605.1| predicted protein [Nematostella vectensis]
gi|156215586|gb|EDO36542.1| predicted protein [Nematostella vectensis]
Length = 201
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP+ + YKD+ L++FLS G ++ R + V K+Q +L AIK +R LG
Sbjct: 90 CPICSRNII-FSYKDVLFLSQFLSPEGNLLNRRQTGVCKKQQLKLENAIKLSRRLGF 145
>gi|328769072|gb|EGF79117.1| hypothetical protein BATDEDRAFT_90157 [Batrachochytrium
dendrobatidis JAM81]
Length = 171
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 23 LSGKGAPRI-DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
L G I +Y+++ +L+ F++ G I P + ++ + QR +++AIKRAR + L
Sbjct: 96 LKKLGIDPIKEYRNVNMLSHFITAIGHIKPRHKTGLTLENQRRVSRAIKRARAMDL 151
>gi|6683437|dbj|BAA89193.1| ribosomal protein S18 [Picea abies]
Length = 43
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 43 LSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+S++GKI+ R++ ++ K+QR + AIKRAR L+ ++
Sbjct: 1 ISEQGKILSGRVNRLTSKQQRLITNAIKRARIPSLLPFL 39
>gi|313611730|gb|EFR86267.1| 30S ribosomal protein S18 [Listeria monocytogenes FSL F2-208]
Length = 44
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIV 50
+K C + G IDYKD+ LL +F+S+RGKI+
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKIL 44
>gi|157120726|ref|XP_001659742.1| mitochondrial ribosomal protein, S18C, putative [Aedes aegypti]
gi|108883031|gb|EAT47256.1| mitochondrial ribosomal protein, S18C, putative [Aedes aegypti]
Length = 140
Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQR 63
+P L + R C L DYK+++LL++F S G+I I+ + ++Q
Sbjct: 40 SPVELEENPFAKDRVQCILCRHNITP-DYKNVQLLSQFQSPYTGRIYGKHITGLCRRRQE 98
Query: 64 ELAKAIKRARYLGLIA 79
++ I +A+ G +
Sbjct: 99 QVENEIIKAQNAGFMP 114
>gi|156839912|ref|XP_001643642.1| hypothetical protein Kpol_478p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156114261|gb|EDO15784.1| hypothetical protein Kpol_478p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 174
Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 19 KSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K+ G +D Y + L+ FLS G+I+ ++ +S K QR ++KA++R + +GL
Sbjct: 95 KNDIFEVCGINPLDLYSNPEYLSHFLSSTGRILHRDVTGLSVKNQRRMSKAVRRCQAIGL 154
Query: 78 IA 79
+
Sbjct: 155 LP 156
>gi|268530714|ref|XP_002630483.1| Hypothetical protein CBG11219 [Caenorhabditis briggsae]
gi|187030547|emb|CAP30411.1| hypothetical protein CBG_11219 [Caenorhabditis briggsae AF16]
Length = 134
Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
+E P L + + C L G +DYK+ RLL +F+S G++ I+ + +
Sbjct: 30 SEDEPVVLENNPYTKAPRKCLLCSTGVE-LDYKNARLLQQFVSTFSGRVYDRHITGLCDE 88
Query: 61 KQRELAKAIKRARYLGLIA 79
+Q++L +AI ++R G +
Sbjct: 89 QQKKLIEAIAKSRRAGFMP 107
>gi|119193212|ref|XP_001247212.1| hypothetical protein CIMG_00983 [Coccidioides immitis RS]
gi|303312267|ref|XP_003066145.1| mitochondrial ribosomal protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105807|gb|EER24000.1| mitochondrial ribosomal protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040142|gb|EFW22076.1| 37S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
Length = 184
Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + H +D YK+ +++ ++++ G+I P ++ +
Sbjct: 92 DLSPAEMKKWRKRHSPNIDVFDALAMDPLDQYKNFSIMSEYMTEMGRIKPRSVTGLRPVN 151
Query: 62 QRELAKAIKRARYLGLIA 79
QR++AKAI+RA LGL+
Sbjct: 152 QRKMAKAIRRAIGLGLMP 169
>gi|255071273|ref|XP_002507718.1| predicted protein [Micromonas sp. RCC299]
gi|226522993|gb|ACO68976.1| predicted protein [Micromonas sp. RCC299]
Length = 237
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+DY++ RLLN F+S GKI+P R S +S K R+ K IK +R +G+
Sbjct: 176 LDYRNARLLNLFVSDAGKILPRRRSRLSAKVHRKAVKHIKTSRVMGI 222
>gi|198449672|ref|XP_001357678.2| GA21965 [Drosophila pseudoobscura pseudoobscura]
gi|198130710|gb|EAL26812.2| GA21965 [Drosophila pseudoobscura pseudoobscura]
Length = 137
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK++RLL++F S G+I I+ + +KQ ++ +AI RA+ L+
Sbjct: 53 CILCKNNITP-HYKNVRLLSQFQSSYTGRIYGRHITGLCKQKQEDVERAILRAQQCLLMP 111
>gi|134057536|emb|CAK48890.1| unnamed protein product [Aspergillus niger]
Length = 221
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 3 EVAPTPLLRRNVSHRRKSCP----LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSV 57
+++P + + R++ P +D YK+ +++ +++ G+I ++ +
Sbjct: 121 DLSPAEMKK----WRKRYSPSTDAFDALNLNPLDLYKNFSVMSEYITSMGRIKHRNMTGL 176
Query: 58 SHKKQRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 177 RPVNQRKISKAIRRAVGLGLMPSVH 201
>gi|313635386|gb|EFS01649.1| 30S ribosomal protein S18 [Listeria seeligeri FSL N1-067]
Length = 40
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 50 VPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
+P R++ S K QR+L AIKR+R + L+ +V
Sbjct: 5 LPRRVTGTSAKYQRKLTVAIKRSRQMALLPFV 36
>gi|297170666|gb|ADI21690.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
HF0130_14P10]
Length = 67
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 15 SHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARY 74
RRK I + D L++F++ GKI+P + + ++ K+QR +++ IK +R+
Sbjct: 10 EPRRK-------NPEDITFLDADALSKFVTDTGKILPRKYTGLTPKQQRRISRTIKTSRH 62
Query: 75 LGLI 78
L L+
Sbjct: 63 LLLV 66
>gi|324520262|gb|ADY47595.1| 28S ribosomal protein S18c [Ascaris suum]
Length = 137
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 5 APTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQR 63
P L ++ C L +DYK+ RLL +F+S G++ ++ + +Q+
Sbjct: 36 TPVELSNNPYEKEKRKCILCAHNIE-LDYKNARLLQQFVSSFSGRVYDRHVTGLCEHQQK 94
Query: 64 ELAKAIKRARYLGLIA 79
+L I +R G +
Sbjct: 95 KLVATIALSRRAGYMP 110
>gi|291395950|ref|XP_002714378.1| PREDICTED: mitochondrial ribosomal protein S18B [Oryctolagus
cuniculus]
Length = 253
Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-----KSCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R+ CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKTCIRKDKIAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL+ Y
Sbjct: 147 HKKLTQAIQKARDHGLLRY 165
>gi|307176792|gb|EFN66189.1| 28S ribosomal protein S18c, mitochondrial [Camponotus floridanus]
Length = 146
Score = 62.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
++ ++ C L DYK++RLL++F SQ G+I S I+ + KQ++L +
Sbjct: 51 IQNPYVKEKRKCILCRLNIEP-DYKNVRLLSQFQSQHTGRIYESHITGLCKYKQKKLEEE 109
Query: 69 IKRARYLGLIAY 80
I +AR GL+ +
Sbjct: 110 INKARSAGLMGF 121
>gi|126137880|ref|XP_001385463.1| hypothetical protein PICST_36650 [Scheffersomyces stipitis CBS
6054]
gi|126092741|gb|ABN67434.1| 30S ribosomal protein S18 [Scheffersomyces stipitis CBS 6054]
Length = 187
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y +L+RFL+ G+I+P I+ S K Q+ L+ AI+ AR GL+
Sbjct: 127 YLMPEILSRFLTSTGQILPRSITGCSAKNQKLLSDAIRTARCCGLL 172
>gi|24651373|ref|NP_524593.1| mitochondrial ribosomal protein S18C [Drosophila melanogaster]
gi|23172679|gb|AAF57041.2| mitochondrial ribosomal protein S18C [Drosophila melanogaster]
gi|66772691|gb|AAY55657.1| IP02765p [Drosophila melanogaster]
gi|117935485|gb|ABK57081.1| IP02768p [Drosophila melanogaster]
gi|220951198|gb|ACL88142.1| mRpS18C-PA [synthetic construct]
gi|220959960|gb|ACL92523.1| mRpS18C-PA [synthetic construct]
Length = 140
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
++ + C L YK+++LL++F S G+I I+ + ++Q ++ +A
Sbjct: 45 IKNPYEKDPQQCILCKHSIEP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQA 103
Query: 69 IKRARYLGLIA 79
I RA+ L+
Sbjct: 104 ILRAQQCLLMP 114
>gi|321477833|gb|EFX88791.1| hypothetical protein DAPPUDRAFT_41774 [Daphnia pulex]
Length = 178
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY+++ LL +F+S G I+P+ + + KQREL AI +A+ GLI
Sbjct: 103 CPICRDEYLILDYRNVELLKQFISPFNGAILPTEKTGLCQTKQRELLVAILKAKDYGLIT 162
Query: 80 Y 80
+
Sbjct: 163 F 163
>gi|254582328|ref|XP_002497149.1| ZYRO0D16566p [Zygosaccharomyces rouxii]
gi|238940041|emb|CAR28216.1| ZYRO0D16566p [Zygosaccharomyces rouxii]
Length = 165
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 23 LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ G +D Y +L++F+S GKI+ ++ +S K QR ++KAI+R + +GL+
Sbjct: 91 FNKFGINPLDLYTSPEVLSQFVSSTGKILHRDVTGLSAKNQRRISKAIRRCQAIGLM 147
>gi|157364998|ref|NP_001098635.1| 28S ribosomal protein S18b, mitochondrial precursor [Macaca
mulatta]
gi|75062118|sp|Q5TM62|RT18B_MACMU RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|55700809|dbj|BAD69764.1| mitochondrial ribosomal protein S18B [Macaca mulatta]
Length = 258
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I S + V K+
Sbjct: 87 PQRTRKTCIRGNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHSLYTGVCVKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
+ L +AI++AR GL+ Y
Sbjct: 147 HKRLTQAIQKARDHGLLIY 165
>gi|195505161|ref|XP_002099385.1| GE10875 [Drosophila yakuba]
gi|194185486|gb|EDW99097.1| GE10875 [Drosophila yakuba]
Length = 140
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK+++LL++F S G+I I+ + ++Q ++ +AI RA+ L+
Sbjct: 56 CILCKHSIEP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMP 114
>gi|197131546|gb|ACH47291.1| ribosomal protein S18 [Geranium carolinianum]
Length = 132
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 36/52 (69%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
I Y +I + +F+S++GKI+ R++ ++ ++Q L +AIK+AR L L+++
Sbjct: 30 DVIHYTNISFICQFISKQGKILLRRVNRLTLQQQGLLDRAIKQARILCLVSF 81
>gi|195452704|ref|XP_002073463.1| GK14131 [Drosophila willistoni]
gi|194169548|gb|EDW84449.1| GK14131 [Drosophila willistoni]
Length = 143
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK+++LL++F S G+I I+ + +KQ ++ KAI RA+ L+
Sbjct: 59 CILCKHNI-HPHYKNVKLLSQFQSPYTGRIYGRHITGLCKQKQEDVEKAILRAQQFLLMP 117
>gi|195575067|ref|XP_002105501.1| GD21516 [Drosophila simulans]
gi|194201428|gb|EDX15004.1| GD21516 [Drosophila simulans]
Length = 140
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK+++LL++F S G+I I+ + ++Q ++ +AI RA+ L+
Sbjct: 56 CILCKHSIEP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMP 114
>gi|195341516|ref|XP_002037352.1| GM12877 [Drosophila sechellia]
gi|194131468|gb|EDW53511.1| GM12877 [Drosophila sechellia]
Length = 140
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK+++LL++F S G+I I+ + ++Q ++ +AI RA+ L+
Sbjct: 56 CILCKHSIEP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMP 114
>gi|315273285|ref|ZP_07869271.1| 30S ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|315295661|ref|ZP_07872234.1| 30S ribosomal protein S18 [Listeria ivanovii FSL F6-596]
gi|313616097|gb|EFR89227.1| 30S ribosomal protein S18 [Listeria marthii FSL S4-120]
gi|313630793|gb|EFR98530.1| 30S ribosomal protein S18 [Listeria ivanovii FSL F6-596]
Length = 43
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKI 49
+K C + G IDYKD+ LL +F+S+RGKI
Sbjct: 12 KKVCYFTSNGITHIDYKDVELLKKFVSERGKI 43
>gi|296813081|ref|XP_002846878.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842134|gb|EEQ31796.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 179
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++S+ G+I P+R + + QR+L+KAI+RA +GL+ V+
Sbjct: 118 YKNFAVMSEYVSETGRIKPARETGLRRVNQRKLSKAIRRAVSMGLMPSVH 167
>gi|90074918|dbj|BAE87139.1| unnamed protein product [Macaca fascicularis]
Length = 258
Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R K CP+ +D+++++LL +F+ + G I S + V K+
Sbjct: 87 PQRTRKTCIRGNKVAGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHSLYTGVCVKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
+ L +AI++AR GL+ Y
Sbjct: 147 HKRLTQAIQKARDHGLLIY 165
>gi|195159351|ref|XP_002020545.1| GL13456 [Drosophila persimilis]
gi|194117314|gb|EDW39357.1| GL13456 [Drosophila persimilis]
Length = 137
Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK++RLL++F S G+I I+ + +KQ ++ +AI RA+ L+
Sbjct: 53 CILCKNNITP-HYKNVRLLSQFQSSYTGRIYGRHITGLCKQKQEDVERAILRAQQCLLMP 111
>gi|328873431|gb|EGG21798.1| hypothetical protein DFA_01684 [Dictyostelium fasciculatum]
Length = 852
Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
C L R++ ++ LL+ +++ G I+P I+ K Q+ LA+ IK A++LG +Y
Sbjct: 684 CLLCYDFGWRVEPLNVPLLSIYMNTEGDILPRYITGNCLKHQKRLARNIKAAKHLGFFSY 743
>gi|317028105|ref|XP_001400590.2| 37S ribosomal protein S18 [Aspergillus niger CBS 513.88]
Length = 196
Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 3 EVAPTPLLRRNVSHRRKSCP----LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSV 57
+++P + + R++ P +D YK+ +++ +++ G+I ++ +
Sbjct: 96 DLSPAEMKK----WRKRYSPSTDAFDALNLNPLDLYKNFSVMSEYITSMGRIKHRNMTGL 151
Query: 58 SHKKQRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 152 RPVNQRKISKAIRRAVGLGLMPSVH 176
>gi|195391732|ref|XP_002054514.1| GJ24497 [Drosophila virilis]
gi|194152600|gb|EDW68034.1| GJ24497 [Drosophila virilis]
Length = 147
Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+ R+ C L YK+++LL++F S G+I I+ + +KQ ++ KA
Sbjct: 52 IANPYKKDRQLCILCKHNITP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKRKQEDVEKA 110
Query: 69 IKRARYLGLIA 79
I RA++ ++
Sbjct: 111 ILRAQHCLMMP 121
>gi|328779125|ref|XP_003249593.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Apis
mellifera]
Length = 142
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
+++ C L DYK++RLL++F S+ G+I I+ + KQ+++ + I +
Sbjct: 50 PYKKKQQLCILCELNIEP-DYKNVRLLSQFQSRYTGRIYEKHITGLCEYKQKKVEQEIIK 108
Query: 72 ARYLGLIAYVN 82
A++ GL+ Y+
Sbjct: 109 AQHAGLMGYMT 119
>gi|126309617|ref|XP_001375521.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S18-2
(MRP-S18-2) (Mrps18b) [Monodelphis domestica]
Length = 246
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 11 RRNVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQREL 65
RR K CP+ +D+++++LL +F+ + G I + + V K+ ++L
Sbjct: 89 RRTCIRGNKVSGNPCPICRDQKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKL 148
Query: 66 AKAIKRARYLGLIAY 80
+AI +AR GL++Y
Sbjct: 149 TEAILKARDQGLLSY 163
>gi|331219942|ref|XP_003322647.1| hypothetical protein PGTG_04184 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301637|gb|EFP78228.1| hypothetical protein PGTG_04184 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 171
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+ LL F++ G+I ++ +S Q++++KAI+RAR +G + Y
Sbjct: 98 NPDLLANFITPLGRIKKRALTGLSKGNQKKVSKAIRRARCMGFLPY 143
>gi|182413417|ref|YP_001818483.1| ribosomal protein S18 [Opitutus terrae PB90-1]
gi|177840631|gb|ACB74883.1| ribosomal protein S18 [Opitutus terrae PB90-1]
Length = 65
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 37 RLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+ +++ GKI+P + + +S K QR + K IK AR + L
Sbjct: 23 ETVRGYITDTGKILPRKYTHLSAKHQRAVTKTIKHARNMLL 63
>gi|178057031|ref|NP_001116612.1| 28S ribosomal protein S18b, mitochondrial precursor [Sus scrofa]
gi|194040130|ref|XP_001926903.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Sus
scrofa]
gi|75063858|sp|Q767K8|RT18B_PIG RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|41529169|dbj|BAD08429.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
gi|41529182|dbj|BAD08441.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
Length = 258
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHR-RKS----CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R + R K CP+ +D+++++LL +F+ + G I + + V K+
Sbjct: 87 PQRTRKMCIRGNKVAGNPCPICRDQKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQ 146
Query: 62 QRELAKAIKRARYLGLIAY 80
++L +AI++AR GL+ Y
Sbjct: 147 HKKLTQAIQKARDHGLLRY 165
>gi|327303002|ref|XP_003236193.1| 37S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|326461535|gb|EGD86988.1| 37S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
Length = 179
Score = 61.0 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + + YK+I +++ ++++ G+I +R + +
Sbjct: 87 DLSPAEMKKWKKRRNPTTDIFDALSLNPLHMYKNIAVMSEYVTETGRIKSARDTGLRRIN 146
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+L+KAI+RA +GL+ V+
Sbjct: 147 QRKLSKAIRRAVSMGLMPSVH 167
>gi|326471273|gb|EGD95282.1| 37S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
Length = 179
Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + + YK+I +++ ++++ G+I +R + +
Sbjct: 87 DLSPAEMKKWKKRRNPTTDIFDALSLNPLHMYKNIAVMSEYVTETGRIKSARDTGLRRIN 146
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+L+KAI+RA +GL+ V+
Sbjct: 147 QRKLSKAIRRAVSMGLMPSVH 167
>gi|242208503|ref|XP_002470102.1| mitochondrial ribosomal protein S18 [Postia placenta Mad-698-R]
gi|220730854|gb|EED84705.1| mitochondrial ribosomal protein S18 [Postia placenta Mad-698-R]
Length = 197
Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+ LL+R+++ GKI ++ ++ K QR L K+I+RA+ +G+I
Sbjct: 139 NSSLLSRYVTDIGKIQSRAVTGLTWKNQRRLGKSIRRAKMMGIIP 183
>gi|169860853|ref|XP_001837061.1| hypothetical protein CC1G_00197 [Coprinopsis cinerea okayama7#130]
gi|116501783|gb|EAU84678.1| hypothetical protein CC1G_00197 [Coprinopsis cinerea okayama7#130]
Length = 176
Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+L+ F++ G+I P + ++ K QR+L KAI+RAR +G+I
Sbjct: 122 PAILSHFVTNMGQIKPRTQTGLTVKSQRKLGKAIRRARMMGVIP 165
>gi|193636723|ref|XP_001949656.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Acyrthosiphon pisum]
Length = 194
Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY+++ LL +F+S GK++ +++ + K+ L A+K+A+ G I
Sbjct: 118 CPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVAVKKAKDWGFIK 177
Query: 80 Y 80
+
Sbjct: 178 F 178
>gi|126310092|ref|XP_001366285.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 196
Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ R++A+ +K A GL+
Sbjct: 70 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCLEEHRKVAECVKMAHRAGLLP 129
>gi|168704562|ref|ZP_02736839.1| hypothetical protein GobsU_33809 [Gemmata obscuriglobus UQM 2246]
Length = 87
Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
IDYKD+ L +FL+ + K++ + S +S QR LA A+KRAR++GL+ YV
Sbjct: 34 FIDYKDVNGLRKFLTSQAKLMSRKRSGLSAGAQRALAAAVKRARFMGLLPYVG 86
>gi|255948116|ref|XP_002564825.1| Pc22g08090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591842|emb|CAP98097.1| Pc22g08090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 193
Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + ++ +D YK+ +++ +++ G+I P ++ +
Sbjct: 93 DLSPAEMKKWGKRQNPQTDAFDALNLNPMDLYKNFSVMSEYMTSMGRIKPRSVTGLRPVN 152
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKA++RA +GL+ V+
Sbjct: 153 QRKIAKALRRAIGMGLMPSVH 173
>gi|170091704|ref|XP_001877074.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648567|gb|EDR12810.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 115
Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+ +L+ F+S+ GKI + ++ K QR+L KAI+RA+ +G+I
Sbjct: 53 NPLVLSNFISEMGKIYGRSATGLTIKSQRKLGKAIRRAKMMGIIP 97
>gi|67968313|dbj|BAE00213.1| ribosomal protein S18 [Selaginella uncinata]
Length = 80
Score = 60.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+D+K+ R S+RGKI+P R++ + K+QR + A KRAR L
Sbjct: 22 ETVDHKNTSSPRRSPSKRGKILPKRMNRSTSKQQRLMTTAAKRARISALSP 72
>gi|289643457|ref|ZP_06475576.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
gi|289506709|gb|EFD27689.1| ribosomal protein S18 [Frankia symbiont of Datisca glomerata]
Length = 55
Score = 60.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 16 HRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
R+K+ L +G +DYKD+ LL +F+S RGKI R++ ++ +
Sbjct: 11 RRKKTNILVERGITYVDYKDVVLLRQFISDRGKIRSRRVTGLTSQ 55
>gi|195110895|ref|XP_002000015.1| GI24853 [Drosophila mojavensis]
gi|193916609|gb|EDW15476.1| GI24853 [Drosophila mojavensis]
Length = 147
Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRE 64
P P + C L YK+++LL++F S G+I I+ + +KQ +
Sbjct: 53 PNPFEKDPQ-----LCILCKHNITP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKQKQED 106
Query: 65 LAKAIKRARYLGLIA 79
+ KAI RA+ L+
Sbjct: 107 VEKAIVRAQRCLLMP 121
>gi|194746199|ref|XP_001955568.1| GF18834 [Drosophila ananassae]
gi|190628605|gb|EDV44129.1| GF18834 [Drosophila ananassae]
Length = 140
Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
C L YK+++LL++F S G+I I+ + KQ ++ +AI RA+ L+
Sbjct: 56 CILCKHNIAP-HYKNVKLLSQFQSPYTGRIYGRHITGLCKNKQEQVEQAILRAQQCLLMP 114
>gi|254443921|ref|ZP_05057397.1| ribosomal protein S18 [Verrucomicrobiae bacterium DG1235]
gi|198258229|gb|EDY82537.1| ribosomal protein S18 [Verrucomicrobiae bacterium DG1235]
Length = 49
Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 36/47 (76%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
D+ +L R++++ GKI+P++++ ++ K+QR++ KAIKRAR L L+
Sbjct: 2 DFHHAHILARYVTETGKIIPAKMNRINAKQQRKITKAIKRARNLRLM 48
>gi|195115888|ref|XP_002002488.1| GI12473 [Drosophila mojavensis]
gi|193913063|gb|EDW11930.1| GI12473 [Drosophila mojavensis]
Length = 203
Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G+++ + + K L A+++AR GLI
Sbjct: 122 CPICRDEYLVLDYRNTELLKQFISPYSGQVLSYSKTGLCQKSHLRLTVAVEQARDCGLIT 181
Query: 80 Y 80
Y
Sbjct: 182 Y 182
>gi|242011260|ref|XP_002426373.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
gi|212510450|gb|EEB13635.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
Length = 181
Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 8 PLLRRNVSHRRKS------CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHK 60
P R R+ CP+ +DY++I LL F+S G I S+ + V
Sbjct: 80 PPRTRKTCIRKNVISTGSPCPICRDEYLVVDYQNIELLKHFISPDNGTIFESKKTGVCQV 139
Query: 61 KQRELAKAIKRARYLGLIAY 80
+ ++ AI +A+ GL++Y
Sbjct: 140 QHYKIKLAILKAQNYGLLSY 159
>gi|158293563|ref|XP_314899.3| AGAP008773-PA [Anopheles gambiae str. PEST]
gi|157016769|gb|EAA10088.3| AGAP008773-PA [Anopheles gambiae str. PEST]
Length = 148
Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
+P L + R C L G DYK+++LL++F S G++ I+ + +
Sbjct: 46 NDSPVVLKDNPFAKERVQCVLCKHGIDP-DYKNVQLLSQFQSPYTGRVYGRNITGLCKNR 104
Query: 62 QRELAKAIKRARYLGLIA 79
++ + I +A+ G +
Sbjct: 105 HEQVEREIIKAQNAGFMP 122
>gi|221124129|ref|XP_002163436.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 142
Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 6 PTPLLR-----RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
P+P ++ ++ K CP+ +G ++D D+ L++FL+ G ++ R++ V
Sbjct: 36 PSPYIKASQLTKDNIPENKGCPVCSRGISFKVD--DVLFLSQFLTPEGHMMNRRVTGVCK 93
Query: 60 KKQRELAKAIKRARYLGLIA 79
K+Q + KAI AR GL+
Sbjct: 94 KQQVAIFKAIHIARRQGLLP 113
>gi|221113925|ref|XP_002161516.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 142
Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 6 PTPLLR-----RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
P+P ++ ++ K CP+ +G ++D D+ L++FL+ G ++ R++ V
Sbjct: 36 PSPYIKASQLTKDNIPENKGCPVCSRGISFKVD--DVLFLSQFLTPEGHMMNRRVTGVCK 93
Query: 60 KKQRELAKAIKRARYLGLIA 79
K+Q + KAI AR GL+
Sbjct: 94 KQQVAIFKAIHIARRQGLLP 113
>gi|225378676|ref|ZP_03755897.1| hypothetical protein ROSEINA2194_04346 [Roseburia inulinivorans
DSM 16841]
gi|225209513|gb|EEG91867.1| hypothetical protein ROSEINA2194_04346 [Roseburia inulinivorans
DSM 16841]
Length = 56
Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGK 48
A+ P+ RR + R+K C G IDYKD L R++S+RGK
Sbjct: 7 ADREGAPMKRRPMHRRKKVCVFCG-KDNVIDYKDTNKLKRYISERGK 52
>gi|45187756|ref|NP_983979.1| ADL117Wp [Ashbya gossypii ATCC 10895]
gi|44982517|gb|AAS51803.1| ADL117Wp [Ashbya gossypii ATCC 10895]
Length = 173
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+A L +++ + RK +D Y +L+RF+ GKI+ ++ +S +
Sbjct: 79 SMARLHLEKKHRKNARKVDIFEELNLDPLDLYTSPAILSRFVGNTGKILHRDVTGLSVRS 138
Query: 62 QRELAKAIKRARYLGLI 78
Q+ +++A++R + +GL+
Sbjct: 139 QKRMSRAVRRCQAIGLM 155
>gi|195051695|ref|XP_001993152.1| GH13236 [Drosophila grimshawi]
gi|193900211|gb|EDV99077.1| GH13236 [Drosophila grimshawi]
Length = 205
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G+++ + + K L A+++AR GL+
Sbjct: 121 CPICRDEYLVLDYRNTDLLKQFISPYSGQVLSYSKTGLCQKSHLRLKVAVEQARDCGLLT 180
Query: 80 Y 80
Y
Sbjct: 181 Y 181
>gi|254565685|ref|XP_002489953.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|238029749|emb|CAY67672.1| Mitochondrial ribosomal protein of the small subunit [Pichia
pastoris GS115]
gi|328350364|emb|CCA36764.1| 37S ribosomal protein rsm18, mitochondrial [Pichia pastoris CBS
7435]
Length = 151
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 23 LSGKGAPRIDYK-DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
K +DY +L+R+L+ G+I+ ++ +S+K+QR L+KAIKRAR GL+++V
Sbjct: 80 FLDKRVNPLDYYCRPEILSRYLTTGGRILHKDVTGLSNKQQRLLSKAIKRARAAGLLSHV 139
Query: 82 N 82
+
Sbjct: 140 S 140
>gi|225718324|gb|ACO15008.1| 28S ribosomal protein S18b, mitochondrial precursor [Caligus
clemensi]
Length = 177
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ IDY++ RLL +F+ S G+I+ SR + V KK ++ AI++A+ GL+
Sbjct: 97 CPICRDIYLVIDYRNTRLLEQFIKSYNGEILSSRDTGVCRKKHFDILVAIEKAKLYGLL 155
>gi|156101790|ref|XP_001616588.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148805462|gb|EDL46861.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 413
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 17 RRKS----CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+K CP ++ LL+ F+ + G I+P +I+ + K+Q ++ KAI A
Sbjct: 241 RKKLLSLKCPFI--------WRHTHLLHHFIGENGLILPRKINFTTRKQQIQIFKAICVA 292
Query: 73 RYLGLIAY 80
R + L Y
Sbjct: 293 RRMALYPY 300
>gi|67900924|ref|XP_680718.1| hypothetical protein AN7449.2 [Aspergillus nidulans FGSC A4]
gi|40742839|gb|EAA62029.1| hypothetical protein AN7449.2 [Aspergillus nidulans FGSC A4]
gi|259483754|tpe|CBF79404.1| TPA: 37S ribosomal protein S18, putative (AFU_orthologue;
AFUA_2G06030) [Aspergillus nidulans FGSC A4]
Length = 191
Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + N + S +D YK+ +++ +++ G+I +++ +
Sbjct: 94 DLSPAEMKKWNKRNPPTSDVFDAVNLNPLDVYKNFSIMSEYMTDMGRIKHRKVTGLRGVN 153
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+LAKAI+RA +GL+ V+
Sbjct: 154 QRKLAKAIRRAIGVGLMPSVH 174
>gi|326479369|gb|EGE03379.1| 37S ribosomal protein S18 [Trichophyton equinum CBS 127.97]
Length = 87
Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+I +++ ++++ G+I +R + + QR+L+KAI+RA +GL+ V+
Sbjct: 26 YKNIAVMSEYVTETGRIKSARDTGLRRINQRKLSKAIRRAVSMGLMPSVH 75
>gi|237841577|ref|XP_002370086.1| ribosomal protein S18 domain containing protein [Toxoplasma gondii
ME49]
gi|211967750|gb|EEB02946.1| ribosomal protein S18 domain containing protein [Toxoplasma gondii
ME49]
gi|221482538|gb|EEE20886.1| hypothetical protein TGGT1_066530 [Toxoplasma gondii GT1]
gi|221504574|gb|EEE30247.1| ribosomal protein S18 domain protein, putative [Toxoplasma gondii
VEG]
Length = 360
Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 25 GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
I ++D+ +L+ F+ + G I+P R + S +QR + KAI AR + L Y
Sbjct: 201 KNNNVPISWRDLHILHHFVGENGLILPRRTTHASRYQQRCIFKAICMARRMALFPY 256
>gi|239789228|dbj|BAH71251.1| ACYPI003773 [Acyrthosiphon pisum]
Length = 176
Score = 58.7 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP+ +DY+++ LL +F+S GK++ +++ + K+ L A+K+++ LG+
Sbjct: 118 CPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVAVKKSQRLGI 175
>gi|66825809|ref|XP_646259.1| hypothetical protein DDB_G0269762 [Dictyostelium discoideum AX4]
gi|60474294|gb|EAL72231.1| hypothetical protein DDB_G0269762 [Dictyostelium discoideum AX4]
Length = 824
Score = 58.7 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 8 PLLRRNVSHRRK--SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P+ + + ++K C L ++D + L+ +L++ G ++P S K Q+++
Sbjct: 660 PVTGKLFTPKKKNPKCLLCQNPNWQVDPLNTPFLSIYLNKAGDMLPRHFSGNCLKHQKKI 719
Query: 66 AKAIKRARYLGLIAYVN 82
K I++A+ LG+ +Y N
Sbjct: 720 VKTIRQAKSLGIFSYKN 736
>gi|229365530|dbj|BAH58016.1| ribosomal protein S18 [Pinus cembroides]
Length = 39
Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 GKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFI 35
>gi|221059952|ref|XP_002260621.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193810695|emb|CAQ42593.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 422
Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 17 RRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLG 76
R+K ++ LL+ F+ + G I+P +I+ + K+Q ++ KAI AR +
Sbjct: 240 RKKILTFKSPFI----WRHTHLLHHFIGENGLILPRKINFTTRKQQIQIFKAICVARRMA 295
Query: 77 LIAY 80
L Y
Sbjct: 296 LYPY 299
>gi|307107265|gb|EFN55508.1| hypothetical protein CHLNCDRAFT_133912 [Chlorella variabilis]
Length = 338
Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
DYK++ LL FLS GK+ + + + K R LA+ +K AR + ++
Sbjct: 264 DYKNVPLLATFLSGAGKLPLRQRTHLRAKLHRHLARQVKIARIMAILPTTE 314
>gi|115400765|ref|XP_001215971.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191637|gb|EAU33337.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 199
Score = 58.4 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 3 EVAPTPLLRRNVSHRRKSCP----LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSV 57
+++P + + R++ P +D YK+ +++ +++ G+I + +
Sbjct: 98 DLSPAEMKK----WRKRYSPSTDAFDSLNMNPLDLYKNFSIMSEYITPMGRIKHRSATGL 153
Query: 58 SHKKQRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA LGL+ V+
Sbjct: 154 RPVNQRKIAKAIRRAIGLGLMPSVH 178
>gi|6520744|dbj|BAA88031.1| 50S ribosomal protein L20 [Abies fabri]
gi|6520753|dbj|BAA88033.1| 50S ribosomal protein L20 [Abies fargesii]
gi|6520763|dbj|BAA88035.1| 50S ribosomal protein L20 [Abies firma]
gi|6520766|dbj|BAA88037.1| 50S ribosomal protein L20 [Abies fraseri]
gi|6520769|dbj|BAA88039.1| 50S ribosomal protein L20 [Abies holophylla]
gi|6520772|dbj|BAA88041.1| 50S ribosomal protein L20 [Abies homolepis]
gi|6520775|dbj|BAA88043.1| 50S ribosomal protein L20 [Abies koreana]
gi|6520784|dbj|BAA88045.1| 50S ribosomal protein L20 [Abies lasiocarpa]
gi|6520790|dbj|BAA88047.1| 50S ribosomal protein L20 [Abies mariesii]
gi|6520793|dbj|BAA88049.1| 50S ribosomal protein L20 [Abies nephrolepis]
gi|6520796|dbj|BAA88051.1| 50S ribosomal protein L20 [Abies sachalinensis]
gi|6520799|dbj|BAA88053.1| 50S ribosomal protein L20 [Abies sibirica]
gi|6520802|dbj|BAA88055.1| 50S ribosomal protein L20 [Abies veitchii]
gi|86755739|gb|ABD15113.1| ribosomal protein S18 [Pinus taeda]
gi|86755754|gb|ABD15115.1| ribosomal protein S18 [Pinus monticola]
gi|86755772|gb|ABD15117.1| ribosomal protein S18 [Pinus nelsonii]
gi|229365518|dbj|BAH58008.1| ribosomal protein S18 [Pinus flexilis]
gi|229365521|dbj|BAH58010.1| ribosomal protein S18 [Pinus strobiformis]
gi|229365524|dbj|BAH58012.1| ribosomal protein S18 [Pinus albicaulis]
gi|229365527|dbj|BAH58014.1| ribosomal protein S18 [Pinus sibirica]
Length = 39
Score = 58.0 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+ R++ ++ K+QR + AIKRAR L L+ ++
Sbjct: 1 GKILSGRVNRLTSKQQRLMTNAIKRARILSLLPFL 35
>gi|170033697|ref|XP_001844713.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
gi|167874681|gb|EDS38064.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
Length = 202
Score = 58.0 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 8 PLLRRNVSHRRKS------CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHK 60
P R R+ CP+ +D++++ LL +F+S + GK++ I+ + +
Sbjct: 105 PKQTRKTCVRKGKLSTGNPCPVCRDEYLVLDHQNVELLKQFVSPQTGKVLSYSITGLCQR 164
Query: 61 KQRELAKAIKRARYLGLIAY 80
KQ EL AI RA GLI +
Sbjct: 165 KQLELKVAIDRAMDYGLITF 184
>gi|149732232|ref|XP_001502208.1| PREDICTED: similar to mitochondrial ribosomal protein S18A [Equus
caballus]
Length = 196
Score = 58.0 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P RI+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYGYEDVLLLSQFIRPHGGMLPRRITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|195398437|ref|XP_002057828.1| GJ17885 [Drosophila virilis]
gi|194141482|gb|EDW57901.1| GJ17885 [Drosophila virilis]
Length = 201
Score = 58.0 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G+++ + + K L A+++AR GLI
Sbjct: 120 CPICRDEYLVLDYRNTELLQQFISPFSGQVLSYSKTGLCQKSHLRLTVAVEQARDCGLIT 179
Query: 80 Y 80
Y
Sbjct: 180 Y 180
>gi|312221960|emb|CBY01900.1| hypothetical protein [Leptosphaeria maculans]
Length = 206
Score = 58.0 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 11 RRNVSHRRKSC---PLSGKGAPRI-DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
++ + RK G I +YK+ +++ ++++ G+I S+ + + K QR++A
Sbjct: 116 QKKWKYGRKRPTEDAFDVLGINPILEYKNFTIMSEYMTETGRIKHSKDTGLRPKNQRKIA 175
Query: 67 KAIKRARYLGLIAYVN 82
KAI+RA LGL+ V+
Sbjct: 176 KAIRRAIGLGLMPSVH 191
>gi|149599697|ref|XP_001514339.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 159
Score = 58.0 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 33 CPICRWNLKYKYSYEDVLLLSQFIRPHGGMLPRRVTGLCQEEHRKIEECVKMAHRAGLLP 92
>gi|148691521|gb|EDL23468.1| mitochondrial ribosomal protein S18A, isoform CRA_a [Mus musculus]
Length = 149
Score = 57.6 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIEECVKMAHRAGLLP 129
>gi|313625727|gb|EFR95370.1| 30S ribosomal protein S18 [Listeria innocua FSL J1-023]
Length = 34
Score = 57.6 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 52 SRISSVSHKKQRELAKAIKRARYLGLIAYV 81
R++ S K QR+L AIKR+R + L+ +V
Sbjct: 1 RRVTGTSAKYQRKLTVAIKRSRQMALLPFV 30
>gi|118088000|ref|XP_001234387.1| PREDICTED: hypothetical protein isoform 1 [Gallus gallus]
Length = 144
Score = 57.6 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ DY D+ LL++F+ G ++P RI+ + ++ +++A ++ A GL+
Sbjct: 65 CPICRWNLKHKYDYVDVLLLSQFIRSDGGMLPRRITGLCLEEHKKIAACVQMAHRAGLLP 124
>gi|327266400|ref|XP_003217994.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Anolis
carolinensis]
Length = 249
Score = 57.6 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 8 PLLRRNVSHRRK-----SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRI-SSVSHKK 61
P R R K CP+ +DY++++LL +F+ I+ I + V KK
Sbjct: 105 PQKTRKTCIRGKHVCGNPCPICRDQNLFLDYRNVKLLEQFVCPYTGIIYHPIHTGVCMKK 164
Query: 62 QRELAKAIKRARYLGLI----AYVNL 83
++L KAI+++R GL+ +++
Sbjct: 165 YKQLTKAIEQSRENGLLFFSIPFMDF 190
>gi|326915357|ref|XP_003203985.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Meleagris gallopavo]
Length = 190
Score = 57.6 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 1 MAEVAPTPLLRRNVSHRRKSCPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSH 59
+ E A TP CP+ DY D+ LL++F+ G ++P RI+ +
Sbjct: 49 IIEDAETPTPPNPSGQ----CPICRWNLKHKYDYVDVLLLSQFIRSDGGMLPRRITGLCL 104
Query: 60 KKQRELAKAIKRARYLGLIA 79
++ +++A ++ A GL+
Sbjct: 105 EEHKKIAACVQMAHRAGLLP 124
>gi|147905850|ref|NP_001090044.1| mitochondrial ribosomal protein S18A [Xenopus laevis]
gi|66911557|gb|AAH97747.1| MGC115435 protein [Xenopus laevis]
Length = 195
Score = 57.2 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y D+ LL++F+ G ++P R++ + ++ R++ +K A GL+
Sbjct: 69 CPICRWNLKHKYTYTDVLLLSQFIRSDGGMLPRRVTGLCMEEHRKVETCVKMAHRAGLLP 128
>gi|225716778|gb|ACO14235.1| 28S ribosomal protein S18b, mitochondrial precursor [Esox lucius]
Length = 241
Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ I +++++LL +F+S G + + V K+Q++L KAI AR GL+A
Sbjct: 121 CPICRDPNIIIHHQNVKLLQQFISPYTGMVYDGTRTGVCEKQQKQLNKAIGAARDHGLLA 180
Query: 80 Y 80
+
Sbjct: 181 F 181
>gi|17505206|ref|NP_081044.1| 28S ribosomal protein S18a, mitochondrial precursor [Mus musculus]
gi|12834120|dbj|BAB22794.1| unnamed protein product [Mus musculus]
gi|26389998|dbj|BAC25825.1| unnamed protein product [Mus musculus]
gi|37748383|gb|AAH58959.1| Mitochondrial ribosomal protein S18A [Mus musculus]
gi|74182479|dbj|BAE42864.1| unnamed protein product [Mus musculus]
gi|148691524|gb|EDL23471.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Mus musculus]
Length = 196
Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIEECVKMAHRAGLLP 129
>gi|297170863|gb|ADI21882.1| hypothetical protein [uncultured verrucomicrobium HF0130_25O04]
Length = 65
Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 30/43 (69%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
D L+++ + GKI+P + + ++ +QR+++K IK++R++ L
Sbjct: 21 DKEALSKYTTDTGKILPRKYTGLTPMQQRKVSKLIKKSRHMQL 63
>gi|109071299|ref|XP_001096782.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 3
[Macaca mulatta]
Length = 196
Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|149069350|gb|EDM18791.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Rattus
norvegicus]
Length = 149
Score = 57.2 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCREEHRKMEECVKMAHRAGLFP 129
>gi|297713037|ref|XP_002833021.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 1
[Pongo abelii]
Length = 196
Score = 57.2 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|148691523|gb|EDL23470.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Mus musculus]
Length = 183
Score = 57.2 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 57 CPICRWNLKHKYTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIEECVKMAHRAGLLP 116
>gi|332234151|ref|XP_003266274.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 1
[Nomascus leucogenys]
gi|332234153|ref|XP_003266275.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 2
[Nomascus leucogenys]
Length = 196
Score = 56.8 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCREEHRKIEECVKMAHRAGLLP 129
>gi|296198273|ref|XP_002746638.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Callithrix jacchus]
Length = 196
Score = 56.8 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCREEHRKIEECVKMAHRAGLLP 129
>gi|118087998|ref|XP_419495.2| PREDICTED: hypothetical protein isoform 2 [Gallus gallus]
Length = 190
Score = 56.8 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ DY D+ LL++F+ G ++P RI+ + ++ +++A ++ A GL+
Sbjct: 65 CPICRWNLKHKYDYVDVLLLSQFIRSDGGMLPRRITGLCLEEHKKIAACVQMAHRAGLLP 124
>gi|297170556|gb|ADI21584.1| hypothetical protein [uncultured verrucomicrobium HF0070_35E03]
Length = 65
Score = 56.8 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
D L ++ + GKI+P + + ++ +QR+++K IK+AR++ L+
Sbjct: 21 DKEALAKYTTDTGKILPRKYTGLTPMQQRKVSKLIKKARHMQLV 64
>gi|24212196|sp|Q99N85|RT18A_MOUSE RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|13620907|dbj|BAB41006.1| mitochondrial ribosomal protein S18a [Mus musculus]
Length = 196
Score = 56.8 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIEECVKMAHRAGLLP 129
>gi|225704502|gb|ACO08097.1| 28S ribosomal protein S18a, mitochondrial precursor [Oncorhynchus
mykiss]
Length = 210
Score = 56.8 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 95 NYTDVLLLSQFIRSDGGMLPRRVTGLCAQEHRKIAICVQMAHRAGLLP 142
>gi|73972954|ref|XP_532152.2| PREDICTED: similar to 28S ribosomal protein S18a, mitochondrial
precursor (MRP-S18-a) (Mrps18a) (MRP-S18-3) isoform 2
[Canis familiaris]
Length = 196
Score = 56.8 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL +F+ RG ++P RI+ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYSYEDVLLLRQFIRPRGGMLPRRITGLCQEEHRKIEECVKMAHRAGLFP 129
>gi|197128057|gb|ACH44555.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
gi|197128058|gb|ACH44556.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
Length = 190
Score = 56.8 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ DY D+ LL++F+ G ++P R++ + ++ +++A ++ A GL+
Sbjct: 65 CPICRWNLKHKYDYVDVLLLSQFIRSDGGMLPRRVTGLCLEEHKKVAVCVQMAHRAGLLP 124
>gi|328782663|ref|XP_624905.3| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Apis
mellifera]
Length = 200
Score = 56.8 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY+++ LL +F+S G+I+ +S+ K ++L AI ++R GL
Sbjct: 126 CPICRDEYLVLDYRNVDLLKQFISKDTGEILNYDYTSLCQKAYKDLLVAIMKSREYGLFP 185
Query: 80 Y 80
Y
Sbjct: 186 Y 186
>gi|330930011|ref|XP_003302852.1| hypothetical protein PTT_14836 [Pyrenophora teres f. teres 0-1]
gi|311321480|gb|EFQ89028.1| hypothetical protein PTT_14836 [Pyrenophora teres f. teres 0-1]
Length = 207
Score = 56.8 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++++ G+I S+ + + K QR++AKAI+RA LGL+ V+
Sbjct: 143 YKNFTMMSEYMTEMGRIKHSKDTGLRPKNQRKIAKAIRRAVGLGLMPSVH 192
>gi|8922511|ref|NP_060605.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|24212201|sp|Q9NVS2|RT18A_HUMAN RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|7022650|dbj|BAA91675.1| unnamed protein product [Homo sapiens]
gi|11989981|emb|CAC19510.1| mitochondrial ribosomal protein S18A [Homo sapiens]
gi|13620905|dbj|BAB41005.1| mitochondrial ribosomal protein S18a [Homo sapiens]
gi|14714476|gb|AAH10364.1| Mitochondrial ribosomal protein S18A [Homo sapiens]
gi|119624629|gb|EAX04224.1| mitochondrial ribosomal protein S18A, isoform CRA_a [Homo sapiens]
gi|312152244|gb|ADQ32634.1| mitochondrial ribosomal protein S18A [synthetic construct]
Length = 196
Score = 56.8 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|114607567|ref|XP_001140364.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 3 [Pan
troglodytes]
gi|114607569|ref|XP_001140445.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 4 [Pan
troglodytes]
gi|114607571|ref|XP_001140280.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2 [Pan
troglodytes]
Length = 196
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|307212968|gb|EFN88550.1| 28S ribosomal protein S18c, mitochondrial [Harpegnathos saltator]
Length = 120
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
++ C L DYK++RLL++F S+ G+I I+ + KQ+ + + I +
Sbjct: 28 PYVREKQQCILCKLNIEP-DYKNVRLLSQFQSRYTGRIYEKHITGLCEYKQKRVQEEITK 86
Query: 72 ARYLGLIAYVN 82
A+ GL+ +++
Sbjct: 87 AQCAGLMGFMS 97
>gi|225164316|ref|ZP_03726584.1| ribosomal protein S18 [Opitutaceae bacterium TAV2]
gi|224801078|gb|EEG19406.1| ribosomal protein S18 [Opitutaceae bacterium TAV2]
Length = 42
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+++R+++ GKI+P + + +S K QR + +KR+R L L
Sbjct: 1 MMSRYVTDTGKILPRKYTGLSAKHQRAVTTTLKRSRNLLL 40
>gi|38454252|ref|NP_942051.1| 28S ribosomal protein S18a, mitochondrial [Rattus norvegicus]
gi|37231675|gb|AAH58507.1| Mitochondrial ribosomal protein S18A [Rattus norvegicus]
gi|149069351|gb|EDM18792.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Rattus
norvegicus]
Length = 196
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCREEHRKMEECVKMAHRAGLFP 129
>gi|317142947|ref|XP_003189458.1| 37S ribosomal protein S18 [Aspergillus oryzae RIB40]
Length = 193
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 17 RRKSCP----LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R++ P +D YK+ +++ +++ G+I + + QR++AKAI+R
Sbjct: 103 RKRYSPATDAFDSLNMNPLDLYKNFSIMSEYITPMGRIKHRNTTGLRPVNQRKIAKAIRR 162
Query: 72 ARYLGLIAYVN 82
A LGL+ V+
Sbjct: 163 AIGLGLMPSVH 173
>gi|159473847|ref|XP_001695045.1| mitochondrial ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|158276424|gb|EDP02197.1| mitochondrial ribosomal protein S18 [Chlamydomonas reinhardtii]
Length = 278
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 25 GKGAPRIDYKDIRLL-NRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ + DYK++ L FLS G+++P R + + + +++ ++ AR++GLI
Sbjct: 197 AEVLEKADYKNVAFLTRWFLSPAGRLLPRRQTRLPVAVHKHVSRQVRLARHMGLI 251
>gi|209730750|gb|ACI66244.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
Length = 210
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 95 NYTDVLLLSQFIRSDGGMLPRRVTGLCAQEHRKIAICVQMAHRAGLLP 142
>gi|229367504|gb|ACQ58732.1| 28S ribosomal protein S18b, mitochondrial precursor [Anoplopoma
fimbria]
gi|229367736|gb|ACQ58848.1| 28S ribosomal protein S18b, mitochondrial precursor [Anoplopoma
fimbria]
Length = 246
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ I +++++LL +F+S G + + V K+Q++L +AI AR G +
Sbjct: 125 CPVCRDPNVIIHHQNVKLLQQFISPHTGMVYDPTRTGVCMKQQKKLHEAINTARDQGFLP 184
Query: 80 Y 80
+
Sbjct: 185 F 185
>gi|224047599|ref|XP_002187655.1| PREDICTED: putative mitochondrial ribosomal protein S18A
[Taeniopygia guttata]
Length = 175
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ DY D+ LL++F+ G ++P R++ + ++ +++A ++ A GL+
Sbjct: 50 CPICRWNLKHKYDYVDVLLLSQFIRSDGGMLPRRVTGLCLEEHKKVAVCVQMAHRAGLLP 109
>gi|82915041|ref|XP_728949.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23485644|gb|EAA20514.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 428
Score = 56.4 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID----YKDIRLLNRFLSQRGKIVPSRISSVS 58
E P + S + + + I ++ LL+ F+ + G I+P +I+ +
Sbjct: 193 EYNPNDFDNNDKSEKYWNPSFDKRKILNIKTPFIWRHTHLLHNFIGENGLILPRKINYTT 252
Query: 59 HKKQRELAKAIKRARYLGLIAY 80
K+Q ++ K+I AR + L Y
Sbjct: 253 RKQQIQIFKSICIARRMALYPY 274
>gi|325114570|emb|CBZ50126.1| putative ribosomal protein S18 domain containing protein [Neospora
caninum Liverpool]
Length = 329
Score = 56.0 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
D+ +L+ F+ + G I+P R + S +QR + KAI AR + L Y
Sbjct: 180 DLHILHHFVGENGLILPRRTTHASRYQQRCIFKAICMARRMALFPY 225
>gi|194760378|ref|XP_001962418.1| GF15452 [Drosophila ananassae]
gi|190616115|gb|EDV31639.1| GF15452 [Drosophila ananassae]
Length = 209
Score = 56.0 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G ++ + + K L A+++AR G +
Sbjct: 126 CPICRDEYLVLDYRNTELLEQFISPHNGNVLSYSKTGLCQKSHLRLTVAVQQARDSGFLT 185
Query: 80 Y 80
Y
Sbjct: 186 Y 186
>gi|225714912|gb|ACO13302.1| 28S ribosomal protein S18a, mitochondrial precursor [Esox lucius]
Length = 210
Score = 56.0 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P R++ + ++ R++ ++ A GL+
Sbjct: 95 NYTDVLLLSQFIRSDGGMLPRRVTGLCAQEHRKITICVQMAHRAGLLP 142
>gi|163914787|ref|NP_001106610.1| mitochondrial ribosomal protein S18B [Xenopus (Silurana)
tropicalis]
gi|156229976|gb|AAI52129.1| Mrps18b protein [Danio rerio]
gi|160773822|gb|AAI55448.1| LOC100127832 protein [Xenopus (Silurana) tropicalis]
Length = 242
Score = 56.0 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 8 PLLRRNVSHR--RK---SCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R +K CP+ I YK++ LL +F + G + ++ V K+
Sbjct: 101 PQKTRKTCIRGDKKCANPCPICRDPNIIIHYKNVNLLQQFFCPETGVVHDPTVTGVCMKQ 160
Query: 62 QRELAKAIKRARYLGLI 78
Q+ L+KAI+ A+ GL+
Sbjct: 161 QKLLSKAIETAKDFGLL 177
>gi|62955491|ref|NP_001017759.1| 28S ribosomal protein S18b, mitochondrial [Danio rerio]
gi|62204689|gb|AAH93356.1| Mitochondrial ribosomal protein S18B [Danio rerio]
gi|126632471|emb|CAM56396.1| novel protein similar to vertebrate mitochondrial ribosomal protein
S18B (MRPS18B) [Danio rerio]
gi|182889438|gb|AAI65094.1| Mrps18b protein [Danio rerio]
Length = 242
Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 8 PLLRRNVSHR--RK---SCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
P R R +K CP+ I YK++ LL +F + G + ++ V K+
Sbjct: 101 PQKTRKTCIRGDKKCANPCPICRDPNIIIHYKNVNLLQQFFCPETGVVHDPTVTGVCMKQ 160
Query: 62 QRELAKAIKRARYLGLI 78
Q+ L+KAI+ A+ GL+
Sbjct: 161 QKLLSKAIETAKDFGLL 177
>gi|320166617|gb|EFW43516.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 266
Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 8 PLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRIS 55
P + ++K CP+ G +DYK+I L++FLS G I+P ++
Sbjct: 186 PPTAVPFTRKKKLCPVCSTGI-VVDYKNIAFLSQFLSKHTGSILPRSVT 233
>gi|189211187|ref|XP_001941924.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978017|gb|EDU44643.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 143
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++++ G+I S+ + + K QR++AKAI+RA LGL+ V+
Sbjct: 79 YKNFTMMSEYMTEMGRIKHSKDTGLRPKNQRKIAKAIRRAVGLGLMPSVH 128
>gi|321466269|gb|EFX77265.1| hypothetical protein DAPPUDRAFT_305829 [Daphnia pulex]
Length = 143
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKK 61
+ P L ++ C L +DYK+ RLL++FLS GK+ I+ + K
Sbjct: 41 DDQPAQNLSNPYQKEKRCCVLCKYDV-NVDYKNARLLSQFLSPFTGKVYERNITGLCKSK 99
Query: 62 QRELAKAIKRARYLGLI 78
Q+ + I +A+ G +
Sbjct: 100 QKIVESEIIKAQNAGYL 116
>gi|307201739|gb|EFN81418.1| 28S ribosomal protein S18a, mitochondrial [Harpegnathos saltator]
Length = 170
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + + K+CP+ + + D+ +L++F+ G ++P RI+ + +Q+ + +
Sbjct: 58 RQLKLKSKACPICATKLD-VKHTDVLILSQFVRSDGCMLPRRITGLCKIQQKRIGIMVSM 116
Query: 72 ARYLGLIA 79
A GL+
Sbjct: 117 AHKAGLMP 124
>gi|50290789|ref|XP_447827.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527138|emb|CAG60776.1| unnamed protein product [Candida glabrata]
Length = 160
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y +L+ ++ GKI+ ++ +S K QR +AKAI+R + +GL+
Sbjct: 104 YARPEILSYYVGSTGKILHRDVTGLSAKNQRRMAKAIRRCQAIGLM 149
>gi|224009618|ref|XP_002293767.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970439|gb|EED88776.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 59
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
++ LL R+++ GKI+ S + K QR++AK +KRAR+LGLI +
Sbjct: 11 NLILLRRYVTPGGKIMNRVQSRLGAKDQRKVAKLVKRARHLGLIPH 56
>gi|311273359|ref|XP_003133826.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 2
[Sus scrofa]
Length = 181
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ ++ + +K A GL+
Sbjct: 55 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIEECVKMAHRAGLLP 114
>gi|302693639|ref|XP_003036498.1| hypothetical protein SCHCODRAFT_83761 [Schizophyllum commune H4-8]
gi|300110195|gb|EFJ01596.1| hypothetical protein SCHCODRAFT_83761 [Schizophyllum commune H4-8]
Length = 205
Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 38 LLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+L F+S+ G I I+ ++ K R L +AIKRA+ +G+I
Sbjct: 133 ILREFVSEMGMIKGRNITRLTSKSHRRLTRAIKRAKMMGVIP 174
>gi|19343853|gb|AAH25456.1| Mrps18a protein [Mus musculus]
Length = 132
Score = 55.3 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 17 RRKSCPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYL 75
R CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A
Sbjct: 2 RPGQCPICRWNLKHKYTYEDVLLLSQFIRPYGGMLPRRVTGLCREEHRKIEECVKMAHRA 61
Query: 76 GLIA 79
GL+
Sbjct: 62 GLLP 65
>gi|87115976|gb|ABD19525.1| ribosomal protein S18 [Picea sitchensis]
Length = 39
Score = 55.3 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 47 GKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
GKI+ R++ ++ K+QR + AIKRAR L+ ++
Sbjct: 1 GKILSGRVNRLTSKQQRLITNAIKRARIPSLLPFL 35
>gi|296474445|gb|DAA16560.1| 28S ribosomal protein S18a, mitochondrial precursor [Bos taurus]
Length = 196
Score = 55.3 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYSYEDVLLLSQFIRPHGGMLPRSITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|155372177|ref|NP_001094699.1| 28S ribosomal protein S18a, mitochondrial precursor [Bos taurus]
gi|182705281|sp|P82919|RT18A_BOVIN RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|151554945|gb|AAI47967.1| MRPS18A protein [Bos taurus]
Length = 196
Score = 55.3 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P I+ + ++ R++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYSYEDVLLLSQFIRPHGGMLPRSITGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|311260501|ref|XP_003128461.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Sus
scrofa]
Length = 196
Score = 54.9 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ ++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIEECVKMAHRAGLLP 129
>gi|330822490|ref|XP_003291684.1| hypothetical protein DICPUDRAFT_82347 [Dictyostelium purpureum]
gi|325078120|gb|EGC31789.1| hypothetical protein DICPUDRAFT_82347 [Dictyostelium purpureum]
Length = 751
Score = 54.9 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 16 HRRKS--CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
++K C L +D ++ L +++ G ++P S K Q+++AK K A+
Sbjct: 580 PKKKHSNCLLCKDPNWELDPLNVPFLTLYVTTEGDLLPRAFSGNCLKHQKKIAKTFKHAK 639
Query: 74 YLGLIAYVN 82
LGL Y N
Sbjct: 640 SLGLFNYKN 648
>gi|156552274|ref|XP_001600138.1| PREDICTED: similar to CG31450-PA [Nasonia vitripennis]
Length = 158
Score = 54.9 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CPL G + + D+ +L +F++ +G ++P RI+ + + +Q+ + + A+ GL+
Sbjct: 67 CPLCSAGV-NVKHTDVLILKQFVNSQGHMLPRRITGLCYIQQKRVGIMVTMAQKAGLMP 124
>gi|311273357|ref|XP_003133825.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 1
[Sus scrofa]
Length = 196
Score = 54.9 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +Y+D+ LL++F+ G ++P RI+ + ++ ++ + +K A GL+
Sbjct: 70 CPICRWNLKHKYNYEDVLLLSQFIRPHGGMLPRRITGLCQEEHLKIEECVKMAHRAGLLP 129
>gi|195161757|ref|XP_002021728.1| GL26668 [Drosophila persimilis]
gi|194103528|gb|EDW25571.1| GL26668 [Drosophila persimilis]
Length = 196
Score = 54.9 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G+++ + + K L A+++AR GLI
Sbjct: 118 CPICRDEYLVLDYRNTELLEQFISPHNGEVLSYSKTGLCQKSHLRLRVAVEQARDSGLIT 177
Query: 80 Y 80
Y
Sbjct: 178 Y 178
>gi|170584258|ref|XP_001896922.1| hypothetical protein Bm1_27350 [Brugia malayi]
gi|158595699|gb|EDP34230.1| hypothetical protein Bm1_27350 [Brugia malayi]
Length = 137
Score = 54.5 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 1 MAEVAPTPLLRRNVSHRR--KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSV 57
M E + R + + K C L K +DYK+ RLL +F+S G++ I+ +
Sbjct: 30 MVEDDDGVVQMRKDPYCKPVKQCFLCAKKIE-LDYKNARLLQQFVSTFSGRVYDQHITGL 88
Query: 58 SHKKQRELAKAIKRARYLGLIA 79
+ +QR L + I +R G +
Sbjct: 89 CNGQQRRLLETIALSRRAGYMP 110
>gi|158297141|ref|XP_317419.4| AGAP008043-PA [Anopheles gambiae str. PEST]
gi|157015051|gb|EAA12276.5| AGAP008043-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 54.5 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 8 PLLRRNVSHRRK------SCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHK 60
P L R R+ CP+ +D+ +I LL +F+S + G ++ R++ + K
Sbjct: 118 PKLTRKTCIRKGRISTGNPCPICRDEYLVLDHNNIDLLKQFISPQTGDVLSYRVTGLCQK 177
Query: 61 KQRELAKAIKRA 72
K +L A++RA
Sbjct: 178 KHTQLLVAVERA 189
>gi|322779386|gb|EFZ09625.1| hypothetical protein SINV_10363 [Solenopsis invicta]
Length = 116
Score = 54.5 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKR 71
++ C L DYK+IRLL++F S+ G+I I+ + KQ L + I +
Sbjct: 53 PYIKEKQQCILCKLNIEP-DYKNIRLLSQFQSRYTGRIYGRHITGLCKHKQMRLEQEIAK 111
Query: 72 A 72
A
Sbjct: 112 A 112
>gi|219113143|ref|XP_002186155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583005|gb|ACI65625.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 50
Score = 54.5 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+I LL FL+ G+I + + + QR + K IKRAR LGL+ +
Sbjct: 5 NIPLLKSFLTPTGQIRNRVQTRLGARDQRRVTKLIKRARCLGLMPF 50
>gi|242765414|ref|XP_002340970.1| 37S ribosomal protein S18, putative [Talaromyces stipitatus ATCC
10500]
gi|218724166|gb|EED23583.1| 37S ribosomal protein S18, putative [Talaromyces stipitatus ATCC
10500]
Length = 208
Score = 54.5 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P+ + + + S ++ YK+ +++ +++ G+I + +
Sbjct: 107 DLSPSEMKKWSKRWSPSSDAFDALNINPLEHYKNFSIMSEYMTPMGRIKHRSATGLRPVN 166
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA +GL+ V+
Sbjct: 167 QRKIAKAIRRAIGVGLMPSVH 187
>gi|157704353|gb|ABV68865.1| RPS18 [Trichoplusia ni]
Length = 185
Score = 54.5 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +D+++ +LL +F+S+ G+++ + + + K+ ++L AI+RA
Sbjct: 106 CPICRDEYSVLDHRNTKLLEQFISEYTGQVLDAFKTGLCQKQHKQLLVAIERA 158
>gi|321451070|gb|EFX62848.1| hypothetical protein DAPPUDRAFT_67655 [Daphnia pulex]
Length = 113
Score = 54.5 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 7 TPLLRRNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
P R+ + K CP+ +D +++ LL +F+S G I+P+ + +
Sbjct: 19 APKTRKTCIRQEKLSTGNPCPICRDEYLILDCRNVVLLRQFISPFNGAILPTEKTGLCQH 78
Query: 61 KQRELAKAIKRARYLGLIAY 80
K REL AI +A+ GLI +
Sbjct: 79 KHRELVVAIMKAKDYGLIKF 98
>gi|198472887|ref|XP_002133135.1| GA29010 [Drosophila pseudoobscura pseudoobscura]
gi|198139207|gb|EDY70537.1| GA29010 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 54.5 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G+++ + + K L A+++AR GLI
Sbjct: 122 CPICRDEYLVLDYRNTELLEQFISPHNGEVLSYSKTGLCQKSHLRLRVAVEQARDSGLIT 181
Query: 80 Y 80
Y
Sbjct: 182 Y 182
>gi|170060975|ref|XP_001866038.1| mitochondrial ribosomal protein S18A [Culex quinquefasciatus]
gi|167879275|gb|EDS42658.1| mitochondrial ribosomal protein S18A [Culex quinquefasciatus]
Length = 164
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L+++L G ++P RI+ + ++QR + + A+ GL+
Sbjct: 75 FCPQCTLGLD-IKHTDVLILSQYLRSDGCMLPRRITGLCKRQQRRMTALVTMAQKAGLMP 133
Query: 80 YVN 82
+N
Sbjct: 134 NIN 136
>gi|239610732|gb|EEQ87719.1| 37S ribosomal protein S18 [Ajellomyces dermatitidis ER-3]
Length = 189
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P +++ + + YK+ +++ ++++ G+I S + +
Sbjct: 89 DLSPAEMMKWKKKKSPSTDAFDALSLNPLHLYKNFAIMSEYMTEMGRIRHSSETGLRPVN 148
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 149 QRKISKAIRRAVSLGLMPSVH 169
>gi|68069571|ref|XP_676697.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496508|emb|CAI00420.1| conserved hypothetical protein [Plasmodium berghei]
Length = 377
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 23 LSGKGAPRID----YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ I ++ LL+ F+ + G I+P +I+ + K+Q ++ K+I AR + L
Sbjct: 195 FDKRKILNIKTPFIWRHTHLLHNFIGENGLILPRKINYTTRKQQIQIFKSICIARRMALY 254
Query: 79 AY 80
Y
Sbjct: 255 PY 256
>gi|70945213|ref|XP_742450.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521442|emb|CAH81057.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 377
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 23 LSGKGAPRID----YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ I ++ LL+ F+ + G I+P +I+ + K+Q ++ K+I AR + L
Sbjct: 215 FDKRKILNIKTPFIWRHTHLLHNFIGENGLILPRKINYTTRKQQIQIFKSICIARRMALY 274
Query: 79 AY 80
Y
Sbjct: 275 PY 276
>gi|312380733|gb|EFR26649.1| hypothetical protein AND_07146 [Anopheles darlingi]
Length = 223
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +D+ +I LL +F+S + G+++ R++ + KK +L A++RA
Sbjct: 140 CPICRDEYLVLDHNNIDLLKQFISPQTGEVLSYRVTGLCQKKHLQLLVAVERA 192
>gi|261194994|ref|XP_002623901.1| 37S ribosomal protein S18 [Ajellomyces dermatitidis SLH14081]
gi|239587773|gb|EEQ70416.1| 37S ribosomal protein S18 [Ajellomyces dermatitidis SLH14081]
gi|327348826|gb|EGE77683.1| 37S ribosomal protein S18 [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P +++ + + YK+ +++ ++++ G+I S + +
Sbjct: 89 DLSPAEMMKWKKKKSPSTDAFDALSLNPLHLYKNFAIMSEYMTEMGRIRHSSETGLRPVN 148
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 149 QRKISKAIRRAVSLGLMPSVH 169
>gi|225713768|gb|ACO12730.1| 28S ribosomal protein S18b, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 181
Score = 54.1 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ IDY+++RLL +F+ G+I+ S+ + V +K ++ AI++A+ GLI
Sbjct: 101 CPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKLYGLI 159
>gi|207109240|ref|ZP_03243402.1| 30S ribosomal protein S18 [Helicobacter pylori HPKX_438_CA4C1]
Length = 45
Score = 54.1 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 51 PSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
P R++ S K Q + AIKRAR++ LI Y+
Sbjct: 1 PRRLTGNSKKWQERVEVAIKRARHMALIPYI 31
>gi|156544129|ref|XP_001605882.1| PREDICTED: similar to CG10757-PA [Nasonia vitripennis]
Length = 208
Score = 54.1 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 7 TPLLRRNVSHRRKS------CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSH 59
P R R K CP+ +D+++ +LLN+F+S G+++ ++ + +
Sbjct: 105 APTRTRKTCVRNKVITTSNPCPICRDEYLVLDHRNTKLLNQFISPYNGELLQTKKTGLCR 164
Query: 60 KKQRELAKAIKRA 72
K+ L AI RA
Sbjct: 165 KQHENLEVAIYRA 177
>gi|290562611|gb|ADD38701.1| 28S ribosomal protein S18b, mitochondrial [Lepeophtheirus salmonis]
Length = 181
Score = 54.1 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ IDY+++RLL +F+ G+I+ S+ + V +K ++ AI++A+ GLI
Sbjct: 101 CPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKLYGLI 159
>gi|121715240|ref|XP_001275229.1| 37S ribosomal protein S18, putative [Aspergillus clavatus NRRL 1]
gi|119403386|gb|EAW13803.1| 37S ribosomal protein S18, putative [Aspergillus clavatus NRRL 1]
Length = 162
Score = 53.7 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + +D Y++ +++ +++ G+I ++ +
Sbjct: 62 DLSPAEMRKWRKRQGPAADAFDSLNMNPLDLYRNFSIMSEYITPMGRIKHRNVTGLRPVN 121
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA +GL+ V+
Sbjct: 122 QRKIAKAIRRAIGMGLMPSVH 142
>gi|301757332|ref|XP_002914507.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 196
Score = 53.7 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P R++ + ++ R++ + +K A GL+
Sbjct: 70 CPVCRWNLKHKYGYEDVLLLSQFIRPCGGLLPRRVTGLCQEEHRKIEECVKMAHRAGLLP 129
>gi|225563104|gb|EEH11383.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325093063|gb|EGC46373.1| 37S ribosomal protein S18 [Ajellomyces capsulatus H88]
Length = 191
Score = 53.7 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P +++ + + YK+ +++ ++++ G+I S + +
Sbjct: 91 DLSPAEMMKWKQKKSPPTDAFDALSLNPLHLYKNFAIMSEYVTEMGRIRHSSETGLRPVN 150
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 151 QRKISKAIRRAVSLGLMPSVH 171
>gi|47204267|emb|CAG13732.1| unnamed protein product [Tetraodon nigroviridis]
Length = 242
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIV-PSRISSVSHKKQRELAKAIKRARYLGLI 78
CP+ + +++++LL +F+S G ++ P+R + V K+Q++L +AI A+ GL+
Sbjct: 119 CPICRDRNIVVHHQNVKLLQQFISPHTGLVLDPTR-TGVCMKQQKKLLEAIVTAQNHGLL 177
Query: 79 ----AYVNL 83
+V+
Sbjct: 178 LVHVPFVDF 186
>gi|25013116|gb|AAN71657.1| SD13983p [Drosophila melanogaster]
Length = 155
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|240275685|gb|EER39198.1| 37S ribosomal protein S18 [Ajellomyces capsulatus H143]
Length = 191
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P +++ + + YK+ +++ ++++ G+I S + +
Sbjct: 91 DLSPAEMMKWKQKKSPPTDAFDALSLNPLHLYKNFAIMSEYVTEMGRIRHSSETGLRPVN 150
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 151 QRKISKAIRRAVSLGLMPSVH 171
>gi|312385727|gb|EFR30153.1| hypothetical protein AND_00411 [Anopheles darlingi]
Length = 161
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L+++L G ++P R++ + ++QR + + A+ GL+
Sbjct: 71 KFCPQCTLGLD-IKHTDVLILSQYLRSDGCMLPRRVTGLCKRQQRRIGAMVTMAQKAGLM 129
Query: 79 A 79
Sbjct: 130 P 130
>gi|603283|gb|AAB64585.1| Yer050cp [Saccharomyces cerevisiae]
gi|207345971|gb|EDZ72612.1| YER050Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323355255|gb|EGA87080.1| Rsm18p [Saccharomyces cerevisiae VL3]
Length = 202
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 157 YARPRILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 202
>gi|66508635|ref|XP_623794.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Apis mellifera]
Length = 158
Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
R + + +CP+ G I + D+ +LN+F+ G I+P RI+ + +Q+ ++ I+
Sbjct: 58 RFLKPKNGACPICSSGL-NIKHTDVLILNQFVRSDGCILPRRITGLCEIQQKRISSLIQM 116
Query: 72 ARYLGLI 78
A+Y GL+
Sbjct: 117 AQYAGLM 123
>gi|194903850|ref|XP_001980951.1| GG17441 [Drosophila erecta]
gi|190652654|gb|EDV49909.1| GG17441 [Drosophila erecta]
Length = 155
Score = 53.7 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|153816337|ref|ZP_01969005.1| hypothetical protein RUMTOR_02589 [Ruminococcus torques ATCC
27756]
gi|145846298|gb|EDK23216.1| hypothetical protein RUMTOR_02589 [Ruminococcus torques ATCC
27756]
Length = 71
Score = 53.3 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGK 48
R R+K C GK I+YKD+ L +++S+RGK
Sbjct: 16 RGPARRRKKVCVFCGKENNEINYKDVAKLKKYVSERGK 53
>gi|209736012|gb|ACI68875.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
gi|303659577|gb|ADM15963.1| 28S ribosomal protein S18a, mitochondrial precursor [Salmo salar]
Length = 210
Score = 53.3 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P R++ + ++ R++A ++ A GL+
Sbjct: 95 NYTDVLLLSQFIRSDGGMLPRRVTGLCAQEYRKIAICVQMAHRAGLLP 142
>gi|323305233|gb|EGA58980.1| Rsm18p [Saccharomyces cerevisiae FostersB]
Length = 153
Score = 53.3 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 108 YARPRILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 153
>gi|259145960|emb|CAY79220.1| Rsm18p [Saccharomyces cerevisiae EC1118]
Length = 153
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 108 YARPRILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 153
>gi|195499133|ref|XP_002096819.1| GE24843 [Drosophila yakuba]
gi|194182920|gb|EDW96531.1| GE24843 [Drosophila yakuba]
Length = 155
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|24645087|ref|NP_731252.1| mitochondrial ribosomal protein S18A [Drosophila melanogaster]
gi|23170711|gb|AAF54251.3| mitochondrial ribosomal protein S18A [Drosophila melanogaster]
gi|189181797|gb|ACD81675.1| FI06460p [Drosophila melanogaster]
Length = 155
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|17536269|ref|NP_495374.1| hypothetical protein T14B4.2 [Caenorhabditis elegans]
gi|13592464|gb|AAK31558.1| Hypothetical protein T14B4.2 [Caenorhabditis elegans]
Length = 139
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHK 60
++ P L + + L G +DYK+ RLL +F+S G++ I+ + +
Sbjct: 35 SDDEPVILENNPYTKEPRKSFLCSTGVE-LDYKNSRLLQQFVSTFSGRVYDRHITGLCDE 93
Query: 61 KQRELAKAIKRARYLGLIA 79
+++L +AI ++R G +
Sbjct: 94 NKKKLIEAIAKSRRAGFMP 112
>gi|225680649|gb|EEH18933.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292325|gb|EEH47745.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 183
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + R + + YK+ +++ ++++ G+I S + +
Sbjct: 83 DLSPAEMKKWKSKKRPSTDAFDALSLNPLHLYKNFAVMSEYVTEMGRIRHSSETGLRPVN 142
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR ++KAI+RA LGL+ V+
Sbjct: 143 QRRISKAIRRAIALGLMPSVH 163
>gi|195572533|ref|XP_002104250.1| GD20860 [Drosophila simulans]
gi|194200177|gb|EDX13753.1| GD20860 [Drosophila simulans]
Length = 155
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|308503372|ref|XP_003113870.1| hypothetical protein CRE_26503 [Caenorhabditis remanei]
gi|308263829|gb|EFP07782.1| hypothetical protein CRE_26503 [Caenorhabditis remanei]
Length = 155
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFL----------------SQ 45
+E P L + + C L G +DYK+ RLL +L +
Sbjct: 36 SEDEPVVLESNPYTKEPRKCLLCSTGVE-LDYKNSRLLQVYLKRFCQSSIKSFQQFVSTF 94
Query: 46 RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
G++ I+ + ++Q++L +AI ++R G +
Sbjct: 95 SGRVYDRHITGLCDEQQKKLIEAIAKSRRAGFMP 128
>gi|154281473|ref|XP_001541549.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411728|gb|EDN07116.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 191
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P +++ + + YK+ +++ ++++ G+I S + +
Sbjct: 91 DLSPAEMMKWKQKKSPPTDAFDALSLNPLHLYKNFAIMSEYVTEMGRIRHSSETGLRPVN 150
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR+++KAI+RA LGL+ V+
Sbjct: 151 QRKISKAIRRAVSLGLMPSVH 171
>gi|70989765|ref|XP_749732.1| 37S ribosomal protein S18 [Aspergillus fumigatus Af293]
gi|66847363|gb|EAL87694.1| 37S ribosomal protein S18, putative [Aspergillus fumigatus Af293]
gi|159129141|gb|EDP54255.1| 37S ribosomal protein S18, putative [Aspergillus fumigatus A1163]
Length = 190
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + +D YK+ +++ +++ G+I + +
Sbjct: 90 DLSPAEMKKWRKRQGPAADAFDALNLNPLDLYKNFSIMSEYMTAMGRIKHRSATGLRPVN 149
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA +GL+ V+
Sbjct: 150 QRKIAKAIRRAIGIGLMPSVH 170
>gi|195330676|ref|XP_002032029.1| GM26335 [Drosophila sechellia]
gi|194120972|gb|EDW43015.1| GM26335 [Drosophila sechellia]
Length = 155
Score = 53.3 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 KFCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|124805732|ref|XP_001350523.1| mitochondrial ribosomal protein S18 precursor, putative [Plasmodium
falciparum 3D7]
gi|23496647|gb|AAN36203.1| mitochondrial ribosomal protein S18 precursor, putative [Plasmodium
falciparum 3D7]
Length = 387
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 36 IRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
LL+ F+ + G I+P +I+ + K+Q ++ K+I AR + L Y
Sbjct: 240 THLLHHFIGENGLILPRKINMTTRKQQIQIFKSICIARRMALYPY 284
>gi|83578098|ref|NP_010970.2| Rsm18p [Saccharomyces cerevisiae S288c]
gi|239938701|sp|P40033|RSM18_YEAST RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977585|sp|A6ZR01|RSM18_YEAS7 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977653|sp|B3LS63|RSM18_YEAS1 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|239977654|sp|B5VHI3|RSM18_YEAS6 RecName: Full=37S ribosomal protein RSM18, mitochondrial; Flags:
Precursor
gi|151944762|gb|EDN63021.1| mitochondrial ribosomal small subunit component [Saccharomyces
cerevisiae YJM789]
gi|256271135|gb|EEU06228.1| Rsm18p [Saccharomyces cerevisiae JAY291]
gi|285811678|tpg|DAA07706.1| TPA: Rsm18p [Saccharomyces cerevisiae S288c]
gi|323333837|gb|EGA75227.1| Rsm18p [Saccharomyces cerevisiae AWRI796]
Length = 138
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 93 YARPRILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 138
>gi|71834394|ref|NP_001025285.1| 28S ribosomal protein S18a, mitochondrial [Danio rerio]
gi|55251150|emb|CAH68866.1| novel protein similar to vertebrate mitochondrial ribosomal protein
S18A (MRPS18A) [Danio rerio]
Length = 210
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P RI+ + ++ ++A ++ A GL+
Sbjct: 94 NYTDVLLLSQFIRSDGGLLPRRITGLCAQEHNKIAICVQMAHRAGLLP 141
>gi|312066944|ref|XP_003136510.1| hypothetical protein LOAG_00922 [Loa loa]
gi|307768324|gb|EFO27558.1| hypothetical protein LOAG_00922 [Loa loa]
Length = 194
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + H ++C L P +I Y D+ +L +F+ + G ++P +++ + K+QR + + +
Sbjct: 72 RKVLKHSPETCTLCTCNVPVKIRYSDVLILEQFMRKDGTVLPQQLTGLCKKQQRRIERCV 131
Query: 70 KRARYLGLIA 79
+A + GL
Sbjct: 132 MQAHWAGLFP 141
>gi|190405612|gb|EDV08879.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 138
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
Y R+L+R+++ G+I I+ +S K QR L+KAI+R + +GL+
Sbjct: 93 YARPRILSRYVTSTGRIQHRDITGLSAKNQRRLSKAIRRCQAIGLM 138
>gi|156393424|ref|XP_001636328.1| predicted protein [Nematostella vectensis]
gi|156223430|gb|EDO44265.1| predicted protein [Nematostella vectensis]
Length = 244
Score = 53.0 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
C + + I KD+ L +F+S G+I+ + + V ++Q++L AI+ A+ G +
Sbjct: 156 VCRIRVEKNYEISSKDVSFLTQFMSPHTGEILHTGKTGVCRQQQKKLLHAIEEAQDKGYL 215
Query: 79 AYV 81
+
Sbjct: 216 PFT 218
>gi|115727489|ref|XP_001197011.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115935364|ref|XP_001186280.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 111
Score = 53.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRG-KIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + YK+I+LL +F+ I + + + ++ + L I++AR G++
Sbjct: 23 CPICRDSNLVLHYKNIKLLEQFICPHSWNIYSTYRTGLCRRQHKALCATIEKARQYGVLP 82
Query: 80 Y 80
+
Sbjct: 83 F 83
>gi|158291025|ref|XP_312545.3| AGAP002407-PA [Anopheles gambiae str. PEST]
gi|157018176|gb|EAA44943.3| AGAP002407-PA [Anopheles gambiae str. PEST]
Length = 161
Score = 52.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ CP G I + D+ +L++++ G ++P RI+ + ++QR + + A+ GL+
Sbjct: 71 RFCPQCTLGLE-IKHTDVLILSQYVRSDGCMLPRRITGLCKRQQRRMGALVTMAQKAGLM 129
Query: 79 A 79
Sbjct: 130 P 130
>gi|291396270|ref|XP_002714485.1| PREDICTED: mitochondrial ribosomal protein S18A [Oryctolagus
cuniculus]
Length = 196
Score = 52.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ Y+D+ LL++F+ G ++P +++ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYTYEDVLLLSQFIRPHGGMLPRKVTGLCQEEHRKVEECVKMAHRAGLFP 129
>gi|332234157|ref|XP_003266277.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 4
[Nomascus leucogenys]
Length = 144
Score = 52.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCREEHRKIEECVKMAHRAGL 127
>gi|62319700|dbj|BAD95243.1| putative protein [Arabidopsis thaliana]
Length = 68
Score = 52.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 52 SRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ + +S K QR++A+ IK AR GL+ + +
Sbjct: 3 RKQTGISAKAQRKIAREIKTARAFGLMPFTTM 34
>gi|212528818|ref|XP_002144566.1| 37S ribosomal protein S18, putative [Penicillium marneffei ATCC
18224]
gi|210073964|gb|EEA28051.1| 37S ribosomal protein S18, putative [Penicillium marneffei ATCC
18224]
Length = 211
Score = 52.2 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P+ + + + + ++ YK+ +++ +++ G+I + +
Sbjct: 110 DLSPSEMKKWSKRWSPSNDAFDALNINPLEHYKNFSIMSEYMTPMGRIKHRSATGLRPVN 169
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA +GL+ V+
Sbjct: 170 QRKIAKAIRRAIGVGLMPSVH 190
>gi|157125818|ref|XP_001660797.1| mitochondrial ribosomal protein, S18B, putative [Aedes aegypti]
gi|108882650|gb|EAT46875.1| mitochondrial ribosomal protein, S18B, putative [Aedes aegypti]
Length = 208
Score = 52.2 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++ L+ +F+S + GK++ +I+ + K+ EL A++RA GLI
Sbjct: 130 CPICRDEFLVLDHRNTDLIKQFVSSQSGKVLSYQITGLCQKRHLELLVAVERAMDYGLIT 189
Query: 80 Y 80
+
Sbjct: 190 F 190
>gi|114607575|ref|XP_001139938.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1 [Pan
troglodytes]
Length = 144
Score = 52.2 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A GL
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGL 127
>gi|195443750|ref|XP_002069558.1| GK11511 [Drosophila willistoni]
gi|194165643|gb|EDW80544.1| GK11511 [Drosophila willistoni]
Length = 155
Score = 52.2 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>gi|327289157|ref|XP_003229291.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Anolis
carolinensis]
Length = 192
Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +++D+ LL++F+ G ++P R++ + + +++A ++ A GL+
Sbjct: 65 CPICRWNLKHKYNFEDVLLLSQFIRSDGGMLPRRVTGLCTVEHKKIAICVQMAHRAGLLP 124
>gi|91091168|ref|XP_971303.1| PREDICTED: similar to ubiquitin fusion degradation protein 2
[Tribolium castaneum]
gi|270014097|gb|EFA10545.1| hypothetical protein TcasGA2_TC012801 [Tribolium castaneum]
Length = 131
Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 10 LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
+ R+ C L +YK+++LL++F S G++ I+ + +Q+ +
Sbjct: 36 MENPFEKERQQCLLCRHKIIP-NYKNVKLLSQFQSPYTGRVYGKHITGLCDTQQKLVEAE 94
Query: 69 IKRARYLGLI 78
I +A+ GL+
Sbjct: 95 IIKAQNAGLM 104
>gi|47224220|emb|CAG09066.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P RI+ + ++ R++ ++ A GL+
Sbjct: 93 NYTDVLLLSQFIRSDGGMLPRRITGLCPEEHRKITICVQMAHRAGLLP 140
>gi|312079520|ref|XP_003142210.1| hypothetical protein LOAG_06626 [Loa loa]
gi|307762624|gb|EFO21858.1| hypothetical protein LOAG_06626 [Loa loa]
Length = 138
Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
+ C L K +DYK+ RLL +F+S G++ I+ + +QR L + I +R G
Sbjct: 51 RQCFLCAKKIE-LDYKNARLLQQFVSTFSGRVYDQHITGLCDGQQRRLLETIALSRRAGY 109
Query: 78 IA 79
+
Sbjct: 110 MP 111
>gi|77413678|ref|ZP_00789862.1| ribosomal protein S18 [Streptococcus agalactiae 515]
gi|77160278|gb|EAO71405.1| ribosomal protein S18 [Streptococcus agalactiae 515]
Length = 43
Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGK 48
R R+K ++ +DYKD LL+RF+S+RGK
Sbjct: 6 RGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGK 43
>gi|145517614|ref|XP_001444690.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412112|emb|CAK77293.1| unnamed protein product [Paramecium tetraurelia]
Length = 483
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 33/58 (56%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
P+ I +++ L +FL++ GKI +S++ + +++ ++IK A+++ L+
Sbjct: 225 PIRRVNNYDIHWRNTEFLVQFLNKSGKIKNRHQTSLAEVQHKKVTRSIKTAKHMLLLP 282
>gi|309358170|emb|CAP34545.2| hypothetical protein CBG_16627 [Caenorhabditis briggsae AF16]
Length = 945
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + C L P ++ YKD+ +L +F+ G ++P +++ + K+Q L + +
Sbjct: 57 RGARKDDELCSLCTCNVPVKLSYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRLERCVM 116
Query: 71 RA 72
+A
Sbjct: 117 QA 118
>gi|195443422|ref|XP_002069416.1| GK18744 [Drosophila willistoni]
gi|194165501|gb|EDW80402.1| GK18744 [Drosophila willistoni]
Length = 210
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +D+++ L+++F+S G+++ + + K L A++RAR GL+
Sbjct: 127 CPICRDEYLVLDHRNTELIDQFISPHSGEVLSYSKTGLCQKSHLRLLVAVQRARDYGLLT 186
Query: 80 Y 80
Y
Sbjct: 187 Y 187
>gi|145518538|ref|XP_001445141.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412585|emb|CAK77744.1| unnamed protein product [Paramecium tetraurelia]
Length = 483
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 34/58 (58%)
Query: 22 PLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
P+ I +++ L +FL++ GKI ++++ + ++++++IK A+++ L+
Sbjct: 225 PIRRVNNYDIHWRNTEFLVQFLNKSGKIKNRHQTNLAEVQHKKVSRSIKTAKHMLLLP 282
>gi|295673186|ref|XP_002797139.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226282511|gb|EEH38077.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 183
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ ++++ G+I S + + QR ++KAI+RA LGL+ V+
Sbjct: 114 YKNFAVMSEYVTEMGRIRHSSETGLRPVNQRRISKAIRRAVALGLMPSVH 163
>gi|157115872|ref|XP_001658323.1| mitochondrial ribosomal protein, S18A, putative [Aedes aegypti]
gi|108876733|gb|EAT40958.1| mitochondrial ribosomal protein, S18A, putative [Aedes aegypti]
Length = 164
Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L+++L G ++P RI+ + ++QR + + A+ GL+
Sbjct: 75 FCPQCSLGLD-IKHTDVLILSQYLRSDGCMLPRRITGLCKRQQRRIGSLVIMAQKAGLMP 133
>gi|260830511|ref|XP_002610204.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
gi|229295568|gb|EEN66214.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
Length = 201
Score = 51.4 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + +KD+ +L++F+ G+++P +++ V + + ++L AI+ A+ GL
Sbjct: 76 CPICSRNLTFT-WKDVHILSQFMRPDGQVMPQQVTGVCNTQHKKLFMAIEEAKQAGLFP 133
>gi|296416053|ref|XP_002837695.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633578|emb|CAZ81886.1| unnamed protein product [Tuber melanosporum]
Length = 202
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
YK+ +L+ ++++ G+I S + + QR +AKAI+RA LG +
Sbjct: 129 YKNFCMLSEYVTEMGRIKHSSETGLRPVNQRRMAKAIRRAIALGFMP 175
>gi|195152966|ref|XP_002017407.1| GL21542 [Drosophila persimilis]
gi|194112464|gb|EDW34507.1| GL21542 [Drosophila persimilis]
Length = 155
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + +++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCYRQQKKMGTLVTMAQKAGLMP 124
>gi|332234155|ref|XP_003266276.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 3
[Nomascus leucogenys]
Length = 127
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCREEHRKIEECVKMA 122
>gi|125777194|ref|XP_001359526.1| GA16258 [Drosophila pseudoobscura pseudoobscura]
gi|54639270|gb|EAL28672.1| GA16258 [Drosophila pseudoobscura pseudoobscura]
Length = 155
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + +++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCYRQQKKMGTLVTMAQKAGLMP 124
>gi|225707422|gb|ACO09557.1| 28S ribosomal protein S18a, mitochondrial precursor [Osmerus
mordax]
Length = 210
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+Y D+ LL++F+ G ++P RI+ + + R+++ ++ A GL+
Sbjct: 95 NYTDVLLLSQFIRSDGGMLPRRITGLCADEHRKISACVQMAFRAGLLP 142
>gi|270011201|gb|EFA07649.1| hypothetical protein TcasGA2_TC030560 [Tribolium castaneum]
Length = 152
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ G I + D+ +L++F+ G ++P R++ + K+Q+ ++ + A G +
Sbjct: 68 CPVCASGLD-IKHTDVLILSQFVRSDGCMLPRRVTGLCKKQQKRMSSLVTMAHKAGKLP 125
>gi|195389977|ref|XP_002053648.1| GJ23236 [Drosophila virilis]
gi|194151734|gb|EDW67168.1| GJ23236 [Drosophila virilis]
Length = 155
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>gi|189239497|ref|XP_975515.2| PREDICTED: similar to mitochondrial ribosomal protein S18A
[Tribolium castaneum]
Length = 146
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELA 66
CP+ G I + D+ +L++F+ G ++P R++ + K+Q+ ++
Sbjct: 68 CPVCASGLD-IKHTDVLILSQFVRSDGCMLPRRVTGLCKKQQKRMS 112
>gi|195345280|ref|XP_002039198.1| GM16961 [Drosophila sechellia]
gi|194134328|gb|EDW55844.1| GM16961 [Drosophila sechellia]
Length = 204
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G ++ + + K L A+++AR G +
Sbjct: 123 CPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLT 182
Query: 80 Y 80
Y
Sbjct: 183 Y 183
>gi|301069365|ref|NP_001180272.1| 28S ribosomal protein S18a, mitochondrial isoform 2 precursor [Homo
sapiens]
gi|56204718|emb|CAI19964.1| mitochondrial ribosomal protein S18A [Homo sapiens]
gi|119624630|gb|EAX04225.1| mitochondrial ribosomal protein S18A, isoform CRA_b [Homo sapiens]
gi|194374617|dbj|BAG62423.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|17647685|ref|NP_523606.1| mitochondrial ribosomal protein S18B, isoform A [Drosophila
melanogaster]
gi|24585392|ref|NP_724248.1| mitochondrial ribosomal protein S18B, isoform B [Drosophila
melanogaster]
gi|7298662|gb|AAF53877.1| mitochondrial ribosomal protein S18B, isoform A [Drosophila
melanogaster]
gi|18447376|gb|AAL68253.1| LP10852p [Drosophila melanogaster]
gi|22946894|gb|AAN11068.1| mitochondrial ribosomal protein S18B, isoform B [Drosophila
melanogaster]
gi|220944418|gb|ACL84752.1| mRpS18B-PA [synthetic construct]
gi|220954374|gb|ACL89730.1| mRpS18B-PA [synthetic construct]
Length = 204
Score = 51.0 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G ++ + + K L A+++AR G +
Sbjct: 123 CPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLT 182
Query: 80 Y 80
Y
Sbjct: 183 Y 183
>gi|194770874|ref|XP_001967512.1| GF20702 [Drosophila ananassae]
gi|190618522|gb|EDV34046.1| GF20702 [Drosophila ananassae]
Length = 154
Score = 51.0 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 65 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 123
>gi|332824155|ref|XP_003311365.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Pan
troglodytes]
Length = 127
Score = 51.0 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|297713039|ref|XP_002833022.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like isoform 2
[Pongo abelii]
Length = 127
Score = 51.0 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|195484663|ref|XP_002090784.1| GE12605 [Drosophila yakuba]
gi|194176885|gb|EDW90496.1| GE12605 [Drosophila yakuba]
Length = 204
Score = 51.0 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++ LL +F+S G ++ + + K L A+++AR G +
Sbjct: 123 CPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLT 182
Query: 80 Y 80
Y
Sbjct: 183 Y 183
>gi|114607573|ref|XP_518500.2| PREDICTED: similar to MRPS18A isoform 5 [Pan troglodytes]
Length = 270
Score = 50.6 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|113197777|gb|AAI21743.1| Si:ch211-117l16.3 [Danio rerio]
Length = 210
Score = 50.6 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + + +Y D+ LL++F+ G ++P RI+ + ++ ++A ++ A L+
Sbjct: 82 CPIYRRNLQNKYNYTDVLLLSQFIRSDGGLLPRRITGLCAQEHNKIAICVQMAHRACLLP 141
>gi|156055318|ref|XP_001593583.1| hypothetical protein SS1G_05010 [Sclerotinia sclerotiorum 1980]
gi|154702795|gb|EDO02534.1| hypothetical protein SS1G_05010 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 218
Score = 50.6 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ +++ G+I S+ + + QR++AKAI+R+ +G++ V+
Sbjct: 144 YKNFSIMSEYVTPMGRIRGSKETGLRPVNQRKIAKAIRRSIGMGMMPSVH 193
>gi|316976883|gb|EFV60080.1| putative ribosomal protein S18 [Trichinella spiralis]
Length = 269
Score = 50.6 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ +DY++I+LL +F+ + G++V SR S + + +L I +A G I
Sbjct: 135 CPICRDEYLVVDYRNIKLLQQFIIPQTGQLVESRKSGLCGHQYLKLRVEIAKATDCGYIP 194
Query: 80 YV 81
+
Sbjct: 195 FT 196
>gi|114319037|gb|ABI63367.1| mitochondrial ribosomal protein S18A [Homo sapiens]
Length = 270
Score = 50.6 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|116180092|ref|XP_001219895.1| hypothetical protein CHGG_00674 [Chaetomium globosum CBS 148.51]
gi|88184971|gb|EAQ92439.1| hypothetical protein CHGG_00674 [Chaetomium globosum CBS 148.51]
Length = 236
Score = 50.6 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
++ P + + K + G +D YK+ L++ F++ G+I S + +
Sbjct: 127 DMKPAEMSKWRQGRPPKKDMVDILGFSPLDNYKNFSLISEFVTPMGRIRHSNDTGLRPVN 186
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKA++RA +GL V+
Sbjct: 187 QRKIAKAVRRAIGMGLHPSVH 207
>gi|66347370|emb|CAI19963.2| mitochondrial ribosomal protein S18A [Homo sapiens]
Length = 264
Score = 50.6 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPR-IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +Y D+ LL++F+ G ++P +I+ + ++ R++ + +K A
Sbjct: 70 CPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMA 122
>gi|301620284|ref|XP_002939508.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 222
Score = 50.3 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ ++Y++++LL +F+ G + + V K+Q+ L KAI A GL+
Sbjct: 100 CPICRDQKLGLNYRNVKLLQQFICPHTGTVYDPTKTGVCMKQQKALVKAITEATDHGLLP 159
>gi|195107508|ref|XP_001998354.1| GI23675 [Drosophila mojavensis]
gi|193914948|gb|EDW13815.1| GI23675 [Drosophila mojavensis]
Length = 155
Score = 50.3 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGALVTMAQKAGLMP 124
>gi|195580336|ref|XP_002080006.1| GD21714 [Drosophila simulans]
gi|194192015|gb|EDX05591.1| GD21714 [Drosophila simulans]
Length = 204
Score = 50.3 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRAR 73
CP+ +DY++ LL +F+S G ++ + + K L A+++AR
Sbjct: 123 CPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQAR 176
>gi|118090202|ref|XP_001234136.1| PREDICTED: similar to CGI-134 protein [Gallus gallus]
Length = 101
Score = 50.3 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 2 AEVAPTPL-LRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISS 56
A + P+ + K C L G +DYK+++LL++F+S G+I I+
Sbjct: 33 AAESDLPIEMENPYEEPPKRCILCGIN---VDYKNVQLLSQFVSPYTGRIYGRHITG 86
>gi|301620286|ref|XP_002939509.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 169
Score = 50.3 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ ++Y++++LL +F+ G + + V K+Q+ L KAI A GL+
Sbjct: 47 CPICRDQKLGLNYRNVKLLQQFICPHTGTVYDPTKTGVCMKQQKALVKAITEATDHGLLP 106
>gi|241566254|ref|XP_002402126.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
gi|215499986|gb|EEC09480.1| 28S ribosomal protein S18A, putative [Ixodes scapularis]
Length = 171
Score = 50.3 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
CPL G + Y D+ +L++F+ +G ++P+ ++ + K+ R + + + A+ GL+
Sbjct: 70 CPLCRVGLTNLKYTDVLILSQFVDSKGNLLPTSVTGLCLKQHRLVGRLVYEAQRTGLM 127
>gi|240849461|ref|NP_001155496.1| 28S ribosomal protein S18a, mitochondrial [Acyrthosiphon pisum]
gi|239792177|dbj|BAH72459.1| ACYPI002845 [Acyrthosiphon pisum]
Length = 182
Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 6 PTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
P+P + + + CPL G + + D+ +L++F+ G ++P R++ + +Q+ +
Sbjct: 55 PSPRKDHLIQNNNECCPLCSLGLD-VKHTDVLILSQFVRSDGCMMPRRVTGLCKTQQKRM 113
Query: 66 AKAIKRARYLGLI 78
+K + A GL+
Sbjct: 114 SKLVSMAHKAGLM 126
>gi|324513285|gb|ADY45464.1| 28S ribosomal protein S18a [Ascaris suum]
Length = 176
Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 11 RRNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI 69
R+ + +C L P ++ Y D+ +L +F+ + G ++P +++ + K+Q + + +
Sbjct: 54 RKVLKKSDDTCSLCTCNIPIKVKYSDVLILEQFMREDGTVLPRQLTGLCKKQQLRVERCV 113
Query: 70 KRARYLGLIA 79
+A + GL
Sbjct: 114 MQAHWAGLFP 123
>gi|194879114|ref|XP_001974177.1| GG21586 [Drosophila erecta]
gi|190657364|gb|EDV54577.1| GG21586 [Drosophila erecta]
Length = 204
Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRAR 73
CP+ +DY++ LL +F+S G ++ + + K L A+++AR
Sbjct: 123 CPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQAR 176
>gi|26344970|dbj|BAC36134.1| unnamed protein product [Mus musculus]
gi|26344988|dbj|BAC36143.1| unnamed protein product [Mus musculus]
gi|148691309|gb|EDL23256.1| mitochondrial ribosomal protein S18B, isoform CRA_c [Mus
musculus]
Length = 162
Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 35 DIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+++LL +F+ + G I + + V K+ ++L +AI++AR GL++Y
Sbjct: 25 NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLSY 71
>gi|268573902|ref|XP_002641928.1| Hypothetical protein CBG16627 [Caenorhabditis briggsae]
Length = 181
Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + C L P ++ YKD+ +L +F+ G ++P +++ + K+Q L + +
Sbjct: 57 RGARKDDELCSLCTCNVPVKLSYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRLERCVM 116
Query: 71 RA 72
+A
Sbjct: 117 QA 118
>gi|19075434|ref|NP_587934.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
pombe 972h-]
gi|74665563|sp|Q9USL7|RSM18_SCHPO RecName: Full=37S ribosomal protein rsm18, mitochondrial; Flags:
Precursor
gi|5701959|emb|CAB52151.1| mitochondrial ribosomal protein subunit S18 [Schizosaccharomyces
pombe]
Length = 166
Score = 49.5 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 23 LSGKGAPRIDY-KDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAK 67
++Y K+ +L+RF+++ G+I P + ++ K QR L++
Sbjct: 99 FKTVNENPMNYWKNPVILSRFVTELGRIKPRGDTGLTAKNQRLLSR 144
>gi|291228805|ref|XP_002734367.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Saccoglossus kowalevskii]
Length = 205
Score = 49.1 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + +K+++LL +F+ G+I V K+ +L I+ A++ GL+
Sbjct: 119 CPICRDQNLVLHFKNVKLLQQFICPHSGQIYKDTAVGVCQKQYEKLNNVIEEAKFKGLLP 178
Query: 80 YV 81
+
Sbjct: 179 FT 180
>gi|149031790|gb|EDL86725.1| mitochondrial ribosomal protein S18B, isoform CRA_c [Rattus
norvegicus]
Length = 234
Score = 49.1 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKR 71
RK+C +++LL +F+ + G I + + V K+ ++L +AI++
Sbjct: 87 PPQRTRKTCI------------NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQK 134
Query: 72 ARYLGLIAY 80
AR GL++Y
Sbjct: 135 AREYGLLSY 143
>gi|154302447|ref|XP_001551633.1| hypothetical protein BC1G_09800 [Botryotinia fuckeliana B05.10]
gi|150855289|gb|EDN30481.1| hypothetical protein BC1G_09800 [Botryotinia fuckeliana B05.10]
Length = 188
Score = 49.1 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 33 YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
YK+ +++ +++ G+I S+ + + QR++AKAI+R+ LG++ V+
Sbjct: 114 YKNFSIMSEYVTPMGRIRGSKETGLRPVNQRKIAKAIRRSIGLGMMPSVH 163
>gi|149031791|gb|EDL86726.1| mitochondrial ribosomal protein S18B, isoform CRA_d [Rattus
norvegicus]
Length = 166
Score = 49.1 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 35 DIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
+++LL +F+ + G I + + V K+ ++L +AI++AR GL++Y
Sbjct: 29 NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKAREYGLLSY 75
>gi|39944378|ref|XP_361726.1| hypothetical protein MGG_04200 [Magnaporthe oryzae 70-15]
gi|145014938|gb|EDJ99506.1| hypothetical protein MGG_04200 [Magnaporthe oryzae 70-15]
Length = 220
Score = 48.7 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P L R R K + G +D Y++ +++ +++ G+I + + +
Sbjct: 119 DLSPEELARFRKPTRPKFDVIDVLGINPLDEYQNFSMISEYMTPMGRIKHPKETCLRPVN 178
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA LGL V+
Sbjct: 179 QRKIAKAIRRAVGLGLHPSVH 199
>gi|215404133|ref|ZP_03416314.1| 30S ribosomal protein S18 [Mycobacterium tuberculosis 02_1987]
Length = 53
Score = 48.7 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 42 FLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAY 80
F+S RGKI ++ ++ ++QR++A+AIK AR + L+ Y
Sbjct: 2 FISDRGKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 40
>gi|332018576|gb|EGI59161.1| 28S ribosomal protein S18a, mitochondrial [Acromyrmex echinatior]
Length = 134
Score = 48.7 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAI---KRA 72
CPL G + + D+ +LN+FL + G ++P R++ + +Q ++ + KRA
Sbjct: 67 CPLCATGLD-VKHTDVLILNQFLRKNGTMLPRRVTGLCMMQQNKVTILVTMAKRA 120
>gi|195055570|ref|XP_001994690.1| GH14680 [Drosophila grimshawi]
gi|193892453|gb|EDV91319.1| GH14680 [Drosophila grimshawi]
Length = 155
Score = 48.7 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 20 SCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP G I + D+ +L++++ G ++P RI+ + H++Q+++ + A+ GL+
Sbjct: 66 FCPECTLGLD-IKHTDVLILSQYVRSDGCMLPRRITKLCHRQQKKMGTLVTMAQKAGLMP 124
>gi|226481391|emb|CAX73593.1| Ribosomal protein S18,domain-containing protein [Schistosoma
japonicum]
Length = 168
Score = 48.3 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
I + D+R+L++FL G ++P ++ +S + Q L I+RAR GL+
Sbjct: 76 IRHTDVRILSQFLRPDGTVLPRHVTGISCRSQWHLELMIERAREAGLLP 124
>gi|17556825|ref|NP_498835.1| hypothetical protein ZC262.8 [Caenorhabditis elegans]
gi|15963734|gb|AAK67242.2|L23647_6 Hypothetical protein ZC262.8 [Caenorhabditis elegans]
Length = 183
Score = 48.0 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + C L P ++ YKD+ +L +F+ G ++P +++ + K+Q + + +
Sbjct: 59 RGARKDDELCSLCTCNVPIKLTYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRMERCVM 118
Query: 71 RA 72
+A
Sbjct: 119 QA 120
>gi|332375420|gb|AEE62851.1| unknown [Dendroctonus ponderosae]
Length = 122
Score = 48.0 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 AEVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
E+ P+P + + CP+ G + + D+ +L++F+ G ++P RI+ + +
Sbjct: 48 GEIQPSPREPYLLKNEDHCCPICASGLD-VKHTDVLILSQFVRSDGCMLPKRITGLCKSQ 106
Query: 62 QREL 65
Q+ +
Sbjct: 107 QKRM 110
>gi|225718232|gb|ACO14962.1| 28S ribosomal protein S18c, mitochondrial precursor [Caligus
clemensi]
Length = 187
Score = 48.0 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 32 DYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
DYK+ +LL +F+S G + S I+ + Q E+ +K+A+ LG +
Sbjct: 113 DYKNPKLLAQFVSPHTGLVYKSHITGLCQFMQEEVENEVKKAQNLGFM 160
>gi|308501977|ref|XP_003113173.1| hypothetical protein CRE_25107 [Caenorhabditis remanei]
gi|308265474|gb|EFP09427.1| hypothetical protein CRE_25107 [Caenorhabditis remanei]
Length = 181
Score = 47.6 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 12 RNVSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIK 70
R + C L P ++ YKD+ +L +F+ G ++P +++ + K+Q + + +
Sbjct: 57 RGARKDDELCSLCTCNVPVKLSYKDVLILEQFMRNDGTVLPRQLTGLCKKQQLRVERCVM 116
Query: 71 RA 72
+A
Sbjct: 117 QA 118
>gi|189237400|ref|XP_001815071.1| PREDICTED: similar to AGAP008043-PA [Tribolium castaneum]
gi|270007626|gb|EFA04074.1| hypothetical protein TcasGA2_TC014308 [Tribolium castaneum]
Length = 188
Score = 47.6 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + ++ LL +F+ + G I+ + + KK ++L AI+RA GL+
Sbjct: 110 CPICRDEYLVLHENNVELLKQFVCEHTGSILSYSKTGLCQKKHQQLLVAIRRAVDSGLLT 169
Query: 80 Y 80
+
Sbjct: 170 F 170
>gi|226372256|gb|ACO51753.1| 28S ribosomal protein S18b, mitochondrial precursor [Rana
catesbeiana]
Length = 222
Score = 47.2 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 13 NVSHRRK----------SCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKK 61
R+K CP+ +DY++IRLL +F+ S G + + V ++
Sbjct: 82 PQKTRKKCIRAGKVCGNPCPICRDQKLHVDYRNIRLLEQFICSHTGVVHDPTKTGVCMEQ 141
Query: 62 QRELAKAIKRARYLGLI 78
++L KAI A+ GL+
Sbjct: 142 YKKLVKAISDAQEHGLL 158
>gi|321261824|ref|XP_003195631.1| 30S ribosomal protein S18 [Cryptococcus gattii WM276]
gi|317462105|gb|ADV23844.1| 30S ribosomal protein S18, putative [Cryptococcus gattii WM276]
Length = 174
Score = 46.8 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ F++ GKI + ++ K QR + K ++RAR +G+I
Sbjct: 115 NPNFAYEFVNPMGKIRSRAETGLTWKSQRRVGKLVRRARAMGII 158
>gi|134114692|ref|XP_774054.1| hypothetical protein CNBH1000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256684|gb|EAL19407.1| hypothetical protein CNBH1000 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 173
Score = 46.0 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ F++ GKI + ++ K QR + K ++RAR +G+I
Sbjct: 114 NPNFAYEFVNPMGKIKSRAETGLTWKSQRRVGKLVRRARAMGII 157
>gi|58271368|ref|XP_572840.1| 30S ribosomal protein S18 [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229099|gb|AAW45533.1| 30S ribosomal protein S18, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 174
Score = 46.0 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
+ F++ GKI + ++ K QR + K ++RAR +G+I
Sbjct: 115 NPNFAYEFVNPMGKIKSRAETGLTWKSQRRVGKLVRRARAMGII 158
>gi|256071003|ref|XP_002571831.1| hypothetical protein [Schistosoma mansoni]
gi|238656979|emb|CAZ28061.1| expressed protein [Schistosoma mansoni]
Length = 168
Score = 46.0 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 31 IDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
I + D+R+L++FL G ++P IS +S + Q L I+RAR GL+
Sbjct: 76 IRHTDVRILSQFLRPDGTVLPRHISGISCRSQSHLELMIERARKAGLLP 124
>gi|307175813|gb|EFN65628.1| 28S ribosomal protein S18a, mitochondrial [Camponotus floridanus]
Length = 160
Score = 46.0 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
K+C L + + D+ +L++FL G ++P R++ + +Q+ + + A+ GL+
Sbjct: 65 KACSLCATKL-NVKHTDVLILSQFLRSDGCMLPRRVTRLCDVQQKRVTALVAMAQKAGLM 123
Query: 79 A 79
Sbjct: 124 P 124
>gi|313226025|emb|CBY21168.1| unnamed protein product [Oikopleura dioica]
Length = 305
Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
E PL+ + CPL + + KD+ +L +F+ + G ++ + +S ++
Sbjct: 106 EEKREPLMLEEFEKPTRPCPLESRKIS-VTPKDVLILAQFIKKDGTLLSQAQTGLSDRQY 164
Query: 63 RELAKAIKRARYLGLIAY 80
+ A+K A+ GL+ Y
Sbjct: 165 EVVKDAVKIAQNDGLLPY 182
>gi|118367993|ref|XP_001017206.1| hypothetical protein TTHERM_00194530 [Tetrahymena thermophila]
gi|89298973|gb|EAR96961.1| hypothetical protein TTHERM_00194530 [Tetrahymena thermophila
SB210]
Length = 742
Score = 45.3 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 8 PLLRRNVSHR--RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
PL + + RK I +++ L+ +F++ G I + ++ +Q+++
Sbjct: 454 PLTKAQTRKQSIRKINYFD------IHWRNTELITQFVNNSGCIKNKIQNRLTRPQQKKI 507
Query: 66 AKAIKRARYLGLIAY 80
A+ I+ +R + L+ +
Sbjct: 508 ARTIRLSREMLLMPF 522
>gi|310793592|gb|EFQ29053.1| ribosomal protein S18 [Glomerella graminicola M1.001]
Length = 206
Score = 45.3 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++ + + S R + G +D Y++ +++ +++ G+I S+ + +
Sbjct: 109 DLSSVEVEKWRKSKRPNVDVIDLLGINPLDHYRNFSMVSEYMTSFGQIEHSKNTGLRPVN 168
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AKAI+RA +G+ V+
Sbjct: 169 QRKMAKAIRRAIGMGIHPSVH 189
>gi|297677600|ref|XP_002816699.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Pongo
abelii]
Length = 235
Score = 44.9 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKR 71
RK+C +++LL +F+ + G I + + V K+ + L +AI++
Sbjct: 86 PPQRTRKTCI------------NVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRLTQAIQK 133
Query: 72 ARYLGLIAY 80
AR GL+ Y
Sbjct: 134 ARDHGLLIY 142
>gi|147898931|ref|NP_001089678.1| mitochondrial ribosomal protein S18B [Xenopus laevis]
gi|76780299|gb|AAI06215.1| MGC130639 protein [Xenopus laevis]
Length = 222
Score = 44.9 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + YK+++LL +F+ G + + V K+Q+ L K I A G +
Sbjct: 100 CPICRDEKLGLHYKNVKLLQQFICPHTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLP 159
>gi|62185793|gb|AAH92315.1| LOC733189 protein [Xenopus laevis]
Length = 218
Score = 44.5 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIA 79
CP+ + YK+++LL +F+ G + + V K+Q+ L K I A G +
Sbjct: 96 CPICRDEKLGLHYKNVKLLQQFICPHTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLP 155
>gi|226481485|emb|CAX73640.1| 28S ribosomal protein S18b, mitochondrial precursor [Schistosoma
japonicum]
Length = 294
Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL-- 77
CP+ + ++ I LL F++ +I PS + + ++++ L + +++AR LG
Sbjct: 127 CPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRRQEKILQQEVEKARDLGYIQ 186
Query: 78 --IAY 80
+ +
Sbjct: 187 IWLPF 191
>gi|85103920|ref|XP_961619.1| hypothetical protein NCU01007 [Neurospora crassa OR74A]
gi|28923167|gb|EAA32383.1| predicted protein [Neurospora crassa OR74A]
gi|28950074|emb|CAD70827.1| conserved hypothetical protein [Neurospora crassa]
Length = 256
Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+Y++ L++ +++ G+I S+ + + QR++AK ++RA LG+ V+
Sbjct: 169 NYRNFSLISDYITPFGRIRHSKETGLKPVNQRKIAKMVRRAIGLGIHPSVH 219
>gi|226481483|emb|CAX73639.1| 28S ribosomal protein S18b, mitochondrial precursor [Schistosoma
japonicum]
Length = 294
Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL-- 77
CP+ + ++ I LL F++ +I PS + + ++++ L + +++AR LG
Sbjct: 127 CPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRRQEKILQQEVEKARDLGYIQ 186
Query: 78 --IAY 80
+ +
Sbjct: 187 IWLPF 191
>gi|321460512|gb|EFX71554.1| hypothetical protein DAPPUDRAFT_308808 [Daphnia pulex]
Length = 162
Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
C + + + D+ +L++F+ G ++P R++++ ++Q+ + + A+ GL+
Sbjct: 74 CYMCKLNLD-VKHTDVLILSQFVRTDGCMLPRRVTNLCKRQQKRIGTMVTMAQKAGLM 130
>gi|307185022|gb|EFN71251.1| 28S ribosomal protein S18b, mitochondrial [Camponotus floridanus]
Length = 195
Score = 44.1 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ + +++++LL +F+++ G ++ + + K+ ++L AI RA
Sbjct: 121 CPICRDEYLVLGHRNVKLLEQFINKYNGDVLSYSQTGICQKRHKQLLVAISRA 173
>gi|50554359|ref|XP_504588.1| YALI0E30371p [Yarrowia lipolytica]
gi|49650457|emb|CAG80192.1| YALI0E30371p [Yarrowia lipolytica]
Length = 228
Score = 44.1 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 19 KSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
K + +KD L+ +++ G I S +S + ++++KAI+R+R G+
Sbjct: 152 KVDQFKEANFDPVKLWKDRMSLSHYVNYSGGISGSHTHHLSKQSHKKISKAIRRSRCAGI 211
Query: 78 IAYVN 82
+ Y++
Sbjct: 212 MPYLH 216
>gi|76154848|gb|AAX26254.2| SJCHGC09615 protein [Schistosoma japonicum]
Length = 228
Score = 44.1 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRARYLGL-- 77
CP+ + ++ I LL F++ +I PS + + ++++ L + +++AR LG
Sbjct: 134 CPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRRQEKILQQEVEKARDLGYIQ 193
Query: 78 --IAY 80
+ +
Sbjct: 194 IWLPF 198
>gi|18143536|dbj|BAB79641.1| ribosomal protein S18 [Pinus attenuata]
gi|18143539|dbj|BAB79643.1| ribosomal protein S18 [Pinus caribaea var. bahamensis]
gi|18143542|dbj|BAB79645.1| ribosomal protein S18 [Pinus banksiana]
gi|18143545|dbj|BAB79647.1| ribosomal protein S18 [Pinus caribaea var. caribaea]
gi|18143548|dbj|BAB79649.1| ribosomal protein S18 [Pinus contorta]
gi|18143551|dbj|BAB79651.1| ribosomal protein S18 [Pinus cubensis]
gi|18143554|dbj|BAB79653.1| ribosomal protein S18 [Pinus maestrensis]
gi|18143557|dbj|BAB79655.1| ribosomal protein S18 [Pinus mugo]
gi|18143560|dbj|BAB79657.1| ribosomal protein S18 [Pinus palustris]
gi|18143563|dbj|BAB79659.1| ribosomal protein S18 [Pinus ponderosa]
gi|18143566|dbj|BAB79661.1| ribosomal protein S18 [Pinus pungens]
gi|18143569|dbj|BAB79663.1| ribosomal protein S18 [Pinus rigida]
gi|18143572|dbj|BAB79665.1| ribosomal protein S18 [Pinus taeda]
gi|18143575|dbj|BAB79667.1| ribosomal protein S18 [Pinus tropicalis]
gi|18143578|dbj|BAB79669.1| ribosomal protein S18 [Pinus virginiana]
gi|18143581|dbj|BAB79671.1| ribosomal protein S18 [Pinus leiophylla]
gi|18143584|dbj|BAB79673.1| ribosomal protein S18 [Pinus patula]
gi|18143587|dbj|BAB79675.1| ribosomal protein S18 [Pinus oocarpa]
gi|18143590|dbj|BAB79677.1| ribosomal protein S18 [Pinus radiata]
gi|18143593|dbj|BAB79679.1| ribosomal protein S18 [Pinus resinosa]
gi|18143596|dbj|BAB79681.1| ribosomal protein S18 [Pinus caribaea var. hondurensis]
gi|18143599|dbj|BAB79683.1| ribosomal protein S18 [Pinus herrerae]
gi|18143602|dbj|BAB79685.1| ribosomal protein S18 [Pinus muricata]
gi|18143605|dbj|BAB79687.1| ribosomal protein S18 [Pinus douglasiana]
gi|18148328|dbj|BAB82978.1| ribosomal protein S18 [Pinus roxburghii]
gi|22775505|dbj|BAC11920.1| ribosomal protein S18 [Pinus jeffreyi]
gi|22775508|dbj|BAC11922.1| ribosomal protein S18 [Pinus engelmannii]
gi|22779285|dbj|BAC15580.1| ribosomal protein S18 [Pinus elliottii]
gi|22779288|dbj|BAC15582.1| ribosomal protein S18 [Pinus serotina]
gi|22779291|dbj|BAC15584.1| ribosomal protein S18 [Pinus echinata]
gi|31559585|dbj|BAC77430.1| ribosomal protein S18 [Pinus uncinata]
gi|31559588|dbj|BAC77432.1| ribosomal protein S18 [Pinus densata]
gi|31559591|dbj|BAC77434.1| ribosomal protein S18 [Pinus luchuensis]
gi|31559594|dbj|BAC77436.1| ribosomal protein S18 [Pinus lawsonii]
gi|31559597|dbj|BAC77438.1| ribosomal protein S18 [Pinus teocote]
gi|31559600|dbj|BAC77440.1| ribosomal protein S18 [Pinus coulteri]
gi|31559603|dbj|BAC77442.1| ribosomal protein S18 [Pinus sylvestris]
gi|31559606|dbj|BAC77444.1| ribosomal protein S18 [Pinus mugo subsp. x rotundata]
gi|74315467|gb|ABA02379.1| ribosomal protein S18 [Cedrus deodara]
gi|74315470|gb|ABA02381.1| ribosomal protein S18 [Tsuga mertensiana]
gi|74315476|gb|ABA02385.1| ribosomal protein S18 [Pinus serotina]
gi|74315479|gb|ABA02387.1| ribosomal protein S18 [Pinus greggii]
gi|74315482|gb|ABA02389.1| ribosomal protein S18 [Pinus arizonica]
gi|74315485|gb|ABA02391.1| ribosomal protein S18 [Pinus coulteri]
gi|74315488|gb|ABA02393.1| ribosomal protein S18 [Pinus devoniana]
gi|74315491|gb|ABA02395.1| ribosomal protein S18 [Pinus durangensis]
gi|74315494|gb|ABA02397.1| ribosomal protein S18 [Pinus engelmannii]
gi|74315497|gb|ABA02399.1| ribosomal protein S18 [Pinus sabiniana]
gi|74315500|gb|ABA02401.1| ribosomal protein S18 [Pinus washoensis]
gi|77020800|gb|ABA60400.1| ribosomal protein S18 [Pinus discolor]
gi|77020803|gb|ABA60402.1| ribosomal protein S18 [Pinus edulis]
gi|77020806|gb|ABA60404.1| ribosomal protein S18 [Pinus johannis]
gi|77020809|gb|ABA60406.1| ribosomal protein S18 [Pinus maximartinezii]
gi|77020812|gb|ABA60408.1| ribosomal protein S18 [Pinus monophylla]
gi|77020815|gb|ABA60410.1| ribosomal protein S18 [Pinus nelsonii]
gi|77020818|gb|ABA60412.1| ribosomal protein S18 [Pinus pinceana]
gi|77020821|gb|ABA60414.1| ribosomal protein S18 [Pinus rzedowskii]
gi|77020824|gb|ABA60416.1| ribosomal protein S18 [Pinus longaeva]
gi|77020827|gb|ABA60418.1| ribosomal protein S18 [Pinus albicaulis]
gi|77020830|gb|ABA60420.1| ribosomal protein S18 [Pinus flexilis]
gi|77020833|gb|ABA60422.1| ribosomal protein S18 [Pinus lambertiana]
gi|77020836|gb|ABA60424.1| ribosomal protein S18 [Pinus strobiformis]
Length = 28
Score = 43.7 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 58 SHKKQRELAKAIKRARYLGLIAYV 81
+ K+QR + AIKRAR L L+ ++
Sbjct: 1 TSKQQRLMTNAIKRARILSLLPFL 24
>gi|196012333|ref|XP_002116029.1| hypothetical protein TRIADDRAFT_60057 [Trichoplax adhaerens]
gi|190581352|gb|EDV21429.1| hypothetical protein TRIADDRAFT_60057 [Trichoplax adhaerens]
Length = 164
Score = 43.3 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 13 NVSHRRKS----CPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSV 57
R K CP+ + + +DY ++ L +F+S GKI ++ +
Sbjct: 93 PPQRRGKVASNPCPICRQKSGTLDYTNVNFLKQFISPFTGKIYEPFVTGL 142
>gi|156598671|gb|ABU85591.1| ribosomal protein S18 [Scaevola aemula]
Length = 61
Score = 43.3 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 29 PRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRA 72
R+D K I LL RF+S GK + ++ ++ K+QR + AI +A
Sbjct: 1 DRLDSKKISLLFRFIS--GKRLSRHVNRLTLKQQRLITIAINQA 42
>gi|119480395|ref|XP_001260226.1| hypothetical protein NFIA_082800 [Neosartorya fischeri NRRL 181]
gi|119408380|gb|EAW18329.1| hypothetical protein NFIA_082800 [Neosartorya fischeri NRRL 181]
Length = 64
Score = 43.3 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 39 LNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
++ +++ G+I + + QR++AKAI+RA +GL+ V+
Sbjct: 1 MSEYITPMGRIKHRSTTGLRPVNQRKIAKAIRRAIGIGLMPSVH 44
>gi|74315473|gb|ABA02383.1| ribosomal protein S18 [Pinus taiwanensis]
Length = 28
Score = 43.3 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 58 SHKKQRELAKAIKRARYLGLIAYV 81
+ K+QR + AIKRAR L L+ ++
Sbjct: 1 TSKQQRLMTSAIKRARILSLLPFL 24
>gi|46137405|ref|XP_390394.1| hypothetical protein FG10218.1 [Gibberella zeae PH-1]
Length = 212
Score = 41.8 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + + + + G +D YK+ L+ F S G I S ++ +
Sbjct: 117 DLSPVEMQKWRKRSVKNNDVIDALGISPLDMYKNFSLIEYFTSSSGMINHSNLTRLRPVN 176
Query: 62 QRELAKAIKRARYLGLIAYVN 82
QR++AK I+R + +G+ V+
Sbjct: 177 QRKVAKMIRRVQGMGIYPSVH 197
>gi|320580067|gb|EFW94290.1| Mitochondrial ribosomal protein of the small subunit [Pichia
angusta DL-1]
Length = 136
Score = 41.8 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 15 SHRRKSCP--LSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKR 71
S R++ + K +D Y ++L++++S G I ++ + HKKQ+++ +AIKR
Sbjct: 53 SRRKRLAQSTFNTKEVSPLDFYCFPKVLSQYMSVTGNIHHRSVTQLQHKKQQQMTRAIKR 112
Query: 72 ARYLGLI 78
A G +
Sbjct: 113 AIQAGFL 119
>gi|171692015|ref|XP_001910932.1| hypothetical protein [Podospora anserina S mat+]
gi|170945956|emb|CAP72757.1| unnamed protein product [Podospora anserina S mat+]
Length = 338
Score = 41.4 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+ +++ F++ G+I+ S+ + + QR++AKAI+RA LG+ V+
Sbjct: 273 NFSMISEFMTPLGRIMHSKDTGLRPVNQRKMAKAIRRAIGLGIHPSVH 320
>gi|242014766|ref|XP_002428056.1| mitochondrial 28S ribosomal protein S18A, putative [Pediculus
humanus corporis]
gi|212512575|gb|EEB15318.1| mitochondrial 28S ribosomal protein S18A, putative [Pediculus
humanus corporis]
Length = 185
Score = 41.4 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
+ P L ++ S+ +K C L I + D+ +L++F++ G+I+ R + +
Sbjct: 53 DSPRVPFLIKHDSNSKK-CILCQLQL-NIKHTDVLILSQFITSEGEIMQRRDIGICKDQY 110
Query: 63 RELAKAIKRARYLGLIA 79
R + I A++ GL+
Sbjct: 111 RLIKNLIYMAQHSGLLP 127
>gi|302913267|ref|XP_003050882.1| hypothetical protein NECHADRAFT_80585 [Nectria haematococca mpVI
77-13-4]
gi|256731820|gb|EEU45169.1| hypothetical protein NECHADRAFT_80585 [Nectria haematococca mpVI
77-13-4]
Length = 212
Score = 41.0 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 3 EVAPTPLLR-RNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHK 60
+++P + + R S R + G +D YK+ L+ F S G I S+++ +
Sbjct: 118 DLSPVEMQKWRKRSVRN-VDVVDALGISPLDMYKNFSLIEHFTSPSGMINHSQLTRLRPV 176
Query: 61 KQRELAKAIKRARYLGLIA 79
QR++AK ++R + +G+
Sbjct: 177 NQRKVAKMVRRVQGMGIYP 195
>gi|30468226|ref|NP_849113.1| ribosomal protein S18 [Cyanidioschyzon merolae strain 10D]
gi|30409326|dbj|BAC76275.1| 30S ribosomal protein S18 [Cyanidioschyzon merolae strain 10D]
Length = 41
Score = 41.0 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 60 KKQRELAKAIKRARYLGLIAYV 81
KKQR++ KAIKRAR + L+ +V
Sbjct: 19 KKQRQMTKAIKRARIMALLPFV 40
>gi|307212292|gb|EFN88100.1| 28S ribosomal protein S18b, mitochondrial [Harpegnathos saltator]
Length = 196
Score = 41.0 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 8 PLLRRNVSHRR-----KSCPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKK 61
P R R+ CP+ +D+++I+LL +F+ G ++ + + V KK
Sbjct: 100 PTKTRKTCIRKDKICGNPCPICRDEYLILDHRNIKLLEQFIDIYNGNVLSYQKTGVCQKK 159
Query: 62 QRELAKAIKRARYLGLIAY 80
+EL A+ +A+ G+I +
Sbjct: 160 HKELLVALTKAKDYGIITF 178
>gi|289621835|emb|CBI51746.1| unnamed protein product [Sordaria macrospora]
Length = 252
Score = 41.0 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN 82
+Y++ L++ +++ G+I S + + QR++AK ++RA LG+ V+
Sbjct: 165 NYRNFSLVSDYMTAFGRIKHSNQTGLKPVNQRKIAKMVRRAIGLGIHPSVH 215
>gi|256052050|ref|XP_002569592.1| hypothetical protein [Schistosoma mansoni]
gi|227284290|emb|CAY16840.1| expressed protein [Schistosoma mansoni]
Length = 454
Score = 40.6 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 6 PTPLLRRNVSHRRKS-----CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSH 59
P+ + R+N H K CP+ + ++ I LL +F++ +I P + +
Sbjct: 101 PSSVTRKNCVHFGKYVSSNPCPICRDEYLVLSHRHIELLKQFINPDTLEIFPLSKTGICR 160
Query: 60 KKQRELAKAIKRARYLGL----IAY 80
+ + L +++A LGL + +
Sbjct: 161 HQYKILQLEVEKASDLGLIQTWLPF 185
>gi|77020797|gb|ABA60398.1| ribosomal protein S18 [Pinus cembroides]
Length = 28
Score = 40.6 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 58 SHKKQRELAKAIKRARYLGLIAYV 81
+ K+Q + AIKRAR L L+ ++
Sbjct: 1 TSKQQCLMTNAIKRARILSLLPFL 24
>gi|302422122|ref|XP_003008891.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352037|gb|EEY14465.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 226
Score = 40.2 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 29/49 (59%)
Query: 35 DIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVNL 83
+ +++ +++ G+I SR + + + QR +AKAI+R +G+ V+
Sbjct: 163 NFSMISEYMTSFGQIKNSRDTGLRPRNQRRMAKAIRRVIGMGIHPSVHF 211
>gi|168029324|ref|XP_001767176.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681672|gb|EDQ68097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 49
Score = 39.9 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 57 VSHKKQRELAKAIKRARYLGLIAYVNL 83
++ K QR++ + IK AR GL+ + ++
Sbjct: 4 LTAKAQRKVIREIKTARAFGLMPFTSM 30
>gi|198420827|ref|XP_002129978.1| PREDICTED: similar to GH13236 [Ciona intestinalis]
Length = 255
Score = 39.9 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 7 TPLLRRNVSHRR------KSCPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVSH 59
P R+ R+ CPL + Y ++ LL+ F+ ++ G++ + +
Sbjct: 156 QPQQTRSNCFRKGEMSTGSPCPLCRDEKIMVTYNNLPLLHHFIDKQTGQLYSNLRTGACR 215
Query: 60 KKQRELAKA 68
K R L KA
Sbjct: 216 FKHRRLVKA 224
>gi|328849059|gb|EGF98248.1| hypothetical protein MELLADRAFT_69451 [Melampsora larici-populina
98AG31]
Length = 171
Score = 39.9 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 3 EVAPTPLLRRNVSHR--RKSCPLS--GKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVS 58
+ P P++RR + + + + P + Y + LL+ FL+ G+I + +S
Sbjct: 63 DRKPRPVIRRPPTKKEVKFTDPFKYYELDILKEPY-NPELLSSFLTPIGRIKNRTQTGLS 121
Query: 59 HKKQRELAKAIKRARYLGLIAY 80
Q++L+K+I+RAR +G + Y
Sbjct: 122 KSSQKKLSKSIRRARCMGFLPY 143
>gi|170591478|ref|XP_001900497.1| hypothetical protein [Brugia malayi]
gi|158592109|gb|EDP30711.1| conserved hypothetical protein [Brugia malayi]
Length = 193
Score = 39.1 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 14 VSHRRKSCPLSGKGAP-RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQREL 65
+ H ++C L P +I Y D+ +L +F+ + G ++P +++ + K+Q+ +
Sbjct: 58 LKHSPETCTLCTCNVPIKIRYSDVLILEQFMRKDGTVLPQQLTGLCKKQQQRI 110
>gi|322710275|gb|EFZ01850.1| 37S ribosomal protein S18, putative [Metarhizium anisopliae ARSEF
23]
Length = 224
Score = 39.1 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + R + + G +D YK+ L+ F + G+I+ S +S+
Sbjct: 129 DLSPVEMQKWRKRSLRSNDVVDALGIRPLDMYKNFSLVQEFTTSSGQIIHSAGTSLRPVN 188
Query: 62 QRELAKAIKRARYLGLIA 79
QR++AK I+R + +G+
Sbjct: 189 QRKIAKMIRRVQGMGIYP 206
>gi|302848325|ref|XP_002955695.1| mitochondrial ribosomal protein S18 [Volvox carteri f. nagariensis]
gi|300259104|gb|EFJ43335.1| mitochondrial ribosomal protein S18 [Volvox carteri f. nagariensis]
Length = 251
Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 25 GKGAPRIDYKDIRLL-NRFLSQRGKIVPSRISSV 57
+ + DYK++ L FLS G+++ R + +
Sbjct: 212 AEVMEKADYKNVAFLTRWFLSPGGRLLSRRHTRL 245
>gi|219686921|dbj|BAH08991.1| ribosomal protein S18 [Stevia alatipes]
gi|219686924|dbj|BAH08993.1| ribosomal protein S18 [Stevia alternifolia]
gi|219686927|dbj|BAH08995.1| ribosomal protein S18 [Stevia anadenotricha]
gi|219686930|dbj|BAH08997.1| ribosomal protein S18 [Stevia aschenborniana]
gi|219686933|dbj|BAH08999.1| ribosomal protein S18 [Stevia berlandieri]
gi|219686936|dbj|BAH09001.1| ribosomal protein S18 [Stevia cinerascens]
gi|219686939|dbj|BAH09003.1| ribosomal protein S18 [Stevia clausseni]
gi|219686942|dbj|BAH09005.1| ribosomal protein S18 [Stevia commixta]
gi|219686945|dbj|BAH09007.1| ribosomal protein S18 [Stevia connata]
gi|219686948|dbj|BAH09009.1| ribosomal protein S18 [Stevia dictyophylla]
gi|219686951|dbj|BAH09011.1| ribosomal protein S18 [Stevia ecatepecana]
gi|219686954|dbj|BAH09013.1| ribosomal protein S18 [Stevia ephemera]
gi|219686957|dbj|BAH09015.1| ribosomal protein S18 [Stevia filodecaballoana]
gi|219686960|dbj|BAH09017.1| ribosomal protein S18 [Stevia hypomalaca]
gi|219686963|dbj|BAH09019.1| ribosomal protein S18 [Stevia latifolia]
gi|219686966|dbj|BAH09021.1| ribosomal protein S18 [Stevia lehmannii]
gi|219686969|dbj|BAH09023.1| ribosomal protein S18 [Stevia lemmonii]
gi|219686972|dbj|BAH09025.1| ribosomal protein S18 [Stevia leptophylla]
gi|219686975|dbj|BAH09027.1| ribosomal protein S18 [Stevia lita]
gi|219686978|dbj|BAH09029.1| ribosomal protein S18 [Stevia mascotensis]
gi|219686984|dbj|BAH09033.1| ribosomal protein S18 [Stevia micrantha]
gi|219686987|dbj|BAH09035.1| ribosomal protein S18 [Stevia mitopoda]
gi|219686990|dbj|BAH09037.1| ribosomal protein S18 [Stevia monardifolia]
gi|219686993|dbj|BAH09039.1| ribosomal protein S18 [Stevia myriadenia]
gi|219686999|dbj|BAH09043.1| ribosomal protein S18 [Stevia occidentalis]
gi|219687004|dbj|BAH09045.1| ribosomal protein S18 [Stevia ophryophylla]
gi|219687007|dbj|BAH09047.1| ribosomal protein S18 [Stevia organensis]
gi|219687010|dbj|BAH09049.1| ribosomal protein S18 [Stevia origanoides]
gi|219687013|dbj|BAH09051.1| ribosomal protein S18 [Stevia perfoliata]
gi|219687016|dbj|BAH09053.1| ribosomal protein S18 [Stevia rebaudiana]
gi|219687019|dbj|BAH09055.1| ribosomal protein S18 [Stevia reticulata]
gi|219687022|dbj|BAH09057.1| ribosomal protein S18 [Stevia revoluta]
gi|219687025|dbj|BAH09059.1| ribosomal protein S18 [Stevia scabrella]
gi|219687028|dbj|BAH09061.1| ribosomal protein S18 [Stevia seemannii]
gi|219687037|dbj|BAH09067.1| ribosomal protein S18 [Stevia selloi]
gi|219687040|dbj|BAH09069.1| ribosomal protein S18 [Stevia serrata]
gi|219687046|dbj|BAH09073.1| ribosomal protein S18 [Stevia tenuis]
gi|219687049|dbj|BAH09075.1| ribosomal protein S18 [Stevia tephrophylla]
gi|219687052|dbj|BAH09077.1| ribosomal protein S18 [Stevia trifida]
gi|219687055|dbj|BAH09079.1| ribosomal protein S18 [Stevia velutinella]
gi|219687058|dbj|BAH09081.1| ribosomal protein S18 [Stevia veronicae]
gi|219687061|dbj|BAH09083.1| ribosomal protein S18 [Stevia viscida]
gi|219687064|dbj|BAH09085.1| ribosomal protein S18 [Carphochaete grahamii]
gi|219687067|dbj|BAH09087.1| ribosomal protein S18 [Revealia macrocephala]
gi|219687070|dbj|BAH09089.1| ribosomal protein S18 [Cronquistia pringlei]
Length = 44
Score = 37.9 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR + AIK+AR L L+ ++N
Sbjct: 1 QQRLITIAIKQARILSLLPFLN 22
>gi|219686981|dbj|BAH09031.1| ribosomal protein S18 [Stevia mexicana]
Length = 44
Score = 37.9 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR + AIK+AR L L+ ++N
Sbjct: 1 QQRLITIAIKQARILSLLPFLN 22
>gi|312085222|ref|XP_003144593.1| hypothetical protein LOAG_09016 [Loa loa]
gi|307760245|gb|EFO19479.1| hypothetical protein LOAG_09016 [Loa loa]
Length = 214
Score = 37.6 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 6 PTPLL----RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFL-SQRGKIVPSRISSVSHK 60
P P + + +CP+ DY++ L+ +FL + +I+P + +
Sbjct: 139 PKPRMFCVDKEGKFRVNHACPICRDEYLFFDYRNPALILQFLFNHTDRILPLKKLGLCFD 198
Query: 61 KQRELAKAIKRARY 74
+ +L + +AR
Sbjct: 199 QYTQLRAQLLKARE 212
>gi|332019173|gb|EGI59683.1| 28S ribosomal protein S18b, mitochondrial [Acromyrmex echinatior]
Length = 125
Score = 37.6 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 21 CPLSGKGAPRIDYKDIRLLNRFLS-QRGKIVPSRISSVSHKKQRELAKAIKRA 72
CP+ +D+++++LL +F++ G ++ +++ ++ ++L A+ +A
Sbjct: 48 CPICRDEYLVLDHRNVKLLEQFINKHNGSVLSYSKTNICQRRHKQLLVALTKA 100
>gi|313233066|emb|CBY24177.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 37.6 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 13 NVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKA 68
R+ CPL YK+ +LL +F+ G I+ + + + EL A
Sbjct: 144 PSYTRKNCCPLHRDVYLLPHYKNTKLLKQFIDPTTGNIMTGLRTGCCLQAEIELGVA 200
>gi|119584194|gb|EAW63790.1| hCG1648259 [Homo sapiens]
Length = 52
Score = 37.2 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 55 SSVSHKKQRELAKAIKRARYLGLIAYV 81
+ + KKQ + KAIKRA+ +G +
Sbjct: 9 TGLCGKKQ--ITKAIKRAQTMGFMPVT 33
>gi|284006558|emb|CBA71819.1| magnesium-chelatase [Arsenophonus nasoniae]
Length = 508
Score = 37.2 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 41 RFLSQ---RGKIVPSRISSV------SHKKQRELAKAIKRARYLGLIA 79
FL + G+I RI+ V + K QR+L AI+ A L L+
Sbjct: 105 EFLGELALSGQI--RRITGVITAAQAALKNQRKLITAIENANELNLLP 150
>gi|219686996|dbj|BAH09041.1| ribosomal protein S18 [Stevia nelsonii]
gi|219687034|dbj|BAH09065.1| ribosomal protein S18 [Stevia seleriana]
Length = 44
Score = 36.8 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR + AIK+AR L L+ ++N
Sbjct: 1 QQRFITIAIKQARILSLLPFLN 22
>gi|260797431|ref|XP_002593706.1| hypothetical protein BRAFLDRAFT_117250 [Branchiostoma floridae]
gi|229278934|gb|EEN49717.1| hypothetical protein BRAFLDRAFT_117250 [Branchiostoma floridae]
Length = 201
Score = 36.8 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 35 DIRLLNRFLSQ-RGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYV 81
++ LL F+ G++ + V KK R L K I++A+ GL+++
Sbjct: 130 NVELLQHFICPHTGEMHNVLRTGVCQKKHRLLIKEIEKAKDHGLLSFT 177
>gi|297461847|ref|XP_002701862.1| PREDICTED: hydrocephalus inducing homolog (mouse) [Bos taurus]
gi|297485427|ref|XP_002694895.1| PREDICTED: hydrocephalus inducing homolog (mouse) [Bos taurus]
gi|296478128|gb|DAA20243.1| hydrocephalus inducing homolog [Bos taurus]
Length = 5120
Score = 36.4 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 14/56 (25%)
Query: 18 RKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRAR 73
RKS + + ID+K L R++ S Q+++A ++RAR
Sbjct: 3190 RKSAFFTIENQGMIDFK-YALY-------------RLTGDSPLHQKKVATHVRRAR 3231
>gi|322699640|gb|EFY91400.1| 37S ribosomal protein S18, putative [Metarhizium acridum CQMa 102]
Length = 224
Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRID-YKDIRLLNRFLSQRGKIVPSRISSVSHKK 61
+++P + + R + + +D YK+ L+ F + G+I+ S +S+
Sbjct: 129 DLSPVEMQKWRKRSLRSNDVVDALDIRPLDMYKNFSLVQEFTTSSGQIIHSAGTSLRPVN 188
Query: 62 QRELAKAIKRARYLGLIA 79
QR++AK ++R + +G+
Sbjct: 189 QRKIAKMVRRVQGMGIYP 206
>gi|170571109|ref|XP_001891605.1| LP10852p [Brugia malayi]
gi|158603818|gb|EDP39599.1| LP10852p, putative [Brugia malayi]
Length = 261
Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 6 PTP-LLRRNVSHRRKS---CPLSGKGAPRIDYKDIRLLNRFLSQR-GKIVPSRISSVS 58
P P + + R K CP+ DY++ L+ +FL + +I+P + +
Sbjct: 114 PKPRMFCIDKEGRFKVNHACPICRDEYLFFDYRNPALILQFLFDQTDRILPLKKLGLC 171
>gi|73972952|ref|XP_865826.1| PREDICTED: similar to mitochondrial ribosomal protein S18A
isoform 3 [Canis familiaris]
Length = 98
Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 50 VPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+P RI+ + ++ R++ + +K A GL
Sbjct: 2 LPRRITGLCQEEHRKIEECVKMAHRAGLFP 31
>gi|313230107|emb|CBY07811.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 12 RNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQ-RGKIVPSRISSVS 58
+N + C L G G I YK+++++++F+S G++ + +
Sbjct: 24 KNFFDTVERCKLCGTG---ISYKNVQMISQFVSPYTGRLYTENATGLC 68
>gi|219687031|dbj|BAH09063.1| ribosomal protein S18 [Stevia seemannioides]
Length = 44
Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 61 KQRELAKAIKRARYLGLIAYVN 82
+QR + AI +AR L L+ ++N
Sbjct: 1 QQRLITIAINQARILSLLPFLN 22
>gi|168036563|ref|XP_001770776.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677994|gb|EDQ64458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
KG R D K I LL F++ +GKIVP IS + + L +A
Sbjct: 141 KGDVRFDDKHINLLADFMTNKGKIVPVNISGMVERGHSYLTRA 183
>gi|168003569|ref|XP_001754485.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694587|gb|EDQ80935.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKA 68
KG R D K I LL F++ +GKIVP IS + + L +A
Sbjct: 399 KGDVRFDDKHINLLADFMTNKGKIVPVNISGMVERGHSYLTRA 441
>gi|297843080|ref|XP_002889421.1| hypothetical protein ARALYDRAFT_470240 [Arabidopsis lyrata subsp.
lyrata]
gi|297335263|gb|EFH65680.1| hypothetical protein ARALYDRAFT_470240 [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
KSC + +G+ ++DYK ++ ++S+ KI +++ V K
Sbjct: 68 KSCSFALQGSYQLDYK--STISGYISEN-KIT--KLTGVKVK 104
>gi|116830349|gb|ABK28132.1| unknown [Arabidopsis thaliana]
Length = 167
Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
KSC + +G+ ++DYK ++ ++S+ KI +++ V K
Sbjct: 68 KSCSFALQGSYQLDYK--STISGYISEN-KIT--KLTGVKVK 104
>gi|18379014|ref|NP_563664.1| unknown protein [Arabidopsis thaliana]
gi|6056421|gb|AAF02885.1|AC009525_19 Unknown protein [Arabidopsis thaliana]
gi|14423480|gb|AAK62422.1|AF386977_1 Unknown protein [Arabidopsis thaliana]
gi|18377524|gb|AAL66928.1| unknown protein [Arabidopsis thaliana]
gi|21555558|gb|AAM63885.1| unknown [Arabidopsis thaliana]
gi|91805319|gb|ABE65389.1| unknown [Arabidopsis thaliana]
gi|332189353|gb|AEE27474.1| uncharacterized protein [Arabidopsis thaliana]
Length = 166
Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 19 KSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHK 60
KSC + +G+ ++DYK ++ ++S+ KI +++ V K
Sbjct: 68 KSCSFALQGSYQLDYK--STISGYISEN-KIT--KLTGVKVK 104
>gi|149069349|gb|EDM18790.1| mitochondrial ribosomal protein S18A, isoform CRA_b [Rattus
norvegicus]
gi|149069352|gb|EDM18793.1| mitochondrial ribosomal protein S18A, isoform CRA_b [Rattus
norvegicus]
Length = 98
Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 50 VPSRISSVSHKKQRELAKAIKRARYLGLIA 79
+P RI+ + ++ R++ + +K A GL
Sbjct: 2 LPRRITGLCREEHRKMEECVKMAHRAGLFP 31
>gi|260778507|ref|ZP_05887399.1| hypothetical protein VIC_003911 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604671|gb|EEX30966.1| hypothetical protein VIC_003911 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 248
Score = 34.5 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 39 LNRFL-SQRGKIVPSRISSVSHKKQRELAKAIKRARYLGL 77
L +F+ +++ I+ S +S Q +A+ +KRAR L L
Sbjct: 208 LIKFIKTEKLPILGS----LSSCYQILVAQQVKRARQLAL 243
>gi|326391222|ref|ZP_08212765.1| PHP domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325992726|gb|EGD51175.1| PHP domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 336
Score = 34.1 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 9 LLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPS 52
+ R RK C + IDY++ +L ++ + G I
Sbjct: 126 MRRSKTEAYRKLCEILTAKGMPIDYEN-EILK-YIDENGNIRYR 167
>gi|301500985|ref|YP_003795450.1| ribosomal protein S18 [Alveolata sp. CCMP3155]
gi|300069531|gb|ADJ66638.1| ribosomal protein S18 [Chromerida sp. RM11]
Length = 127
Score = 34.1 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 32 DYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI 78
D ++ + FL + +I P R++ + K+Q+ L + KR R L ++
Sbjct: 46 DATNVVFSSWFLDRYQRIRPRRLTRLRIKEQKILTRHAKRLRQLLIL 92
>gi|288932824|ref|YP_003436884.1| hypothetical protein Ferp_2502 [Ferroglobus placidus DSM 10642]
gi|288895072|gb|ADC66609.1| conserved hypothetical protein [Ferroglobus placidus DSM 10642]
Length = 319
Score = 33.7 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 4 VAPTPLLRRNVSHR-RKSCPLSGKGAPRIDYKDIRLLNRFLSQRG 47
P P + + +K CP ++ +D+ +LN+ L +RG
Sbjct: 40 KKPLPFTKGSFEEDLKKPCPFCEDIVEKVAARDVEVLNKNLKRRG 84
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.199 0.763
Lambda K H
0.267 0.0606 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,297,038,263
Number of Sequences: 14124377
Number of extensions: 125306940
Number of successful extensions: 263824
Number of sequences better than 10.0: 2056
Number of HSP's better than 10.0 without gapping: 3772
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 259623
Number of HSP's gapped (non-prelim): 3963
length of query: 83
length of database: 4,842,793,630
effective HSP length: 54
effective length of query: 29
effective length of database: 4,080,077,272
effective search space: 118322240888
effective search space used: 118322240888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 77 (33.7 bits)