HHsearch alignment for GI: 254780331 and conserved domain: COG0359
>COG0359 RplI Ribosomal protein L9 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=1.4e-45 Score=307.78 Aligned_cols=148 Identities=41% Similarity=0.681 Sum_probs=144.9
Q ss_pred EEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 33465201117587783888277632110143787301220146888778999998422346789999887654321000
Q gi|254780331|r 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLEKKAKYEGISKDLAKKNFSLI 93 (179)
Q Consensus 14 mkVIL~~dv~~lG~~Gdiv~Vk~GyaRN~LiP~~~A~~aT~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~L~~~~l~i~ 93 (179)
T Consensus 1 MkVILl~dV~~lGk~Gdiv~VkdGYarNfLiPkglAv~At~~n~~~~~~~r~~~e~~~~~~~~~a~~lk~~Le~~~~~i~ 80 (148)
T COG0359 1 MKVILLEDVKGLGKKGDIVEVKDGYARNFLIPKGLAVPATKGNLKLLEARRAKLEKKAAEELAEAEALKEKLEGKTVEIA 80 (148)
T ss_pred CEEEEECCHHHCCCCCCEEEECCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 93899340132587888899646126464030463000799899999999999999888999999999988507609999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECH
Q ss_conf 25565431003410789999998608876866630265643205499999963972999999997251
Q gi|254780331|r 94 RAAGDTGYLYGSVSSRDIADLLIEEGFDVNRGQINLKSPIKSVGIHNIMISLHADVSTTITLNVARST 161 (179)
Q Consensus 94 ~k~~e~gkLfGsVt~~dI~~~L~~~gi~I~k~~I~l~~pIk~~G~y~V~I~L~~~V~a~i~V~V~~~~ 161 (179)
T Consensus 81 ~kag~~GklfGSVt~~dIa~~l~~~g~~idk~~i~l~~~ik~~G~~~V~vkLh~eV~a~v~v~V~~~~ 148 (148)
T COG0359 81 VKAGEDGKLFGSVTSKDIAEALKAAGFKLDKRKIRLPNGIKTLGEHEVEVKLHEEVTATVKVNVVAEN 148 (148)
T ss_pred EECCCCCCEECCCCHHHHHHHHHHCCCCCCHHEEECCCHHHHCCEEEEEEEECCCEEEEEEEEEEECC
T ss_conf 77188886620423899999999708875031556674265361068899825863999999997279