HHsearch results for GI: 254780331 and protein with PDBid: 3ofq_H
>3ofq_H 50S ribosomal protein L9; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=100.00 E-value=0 Score=316.05 Aligned_cols=147 Identities=37% Similarity=0.632 Sum_probs=142.6
Q ss_pred EEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q ss_conf 334652011175877838882776321101437873012201468887789999984223467899998876543-2100
Q gi|254780331|r 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLEKKAKYEGISKDLAKK-NFSL 92 (179)
Q Consensus 14 mkVIL~~dv~~lG~~Gdiv~Vk~GyaRN~LiP~~~A~~aT~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~L~~~-~l~i 92 (179)
|||||++||++||+.||+|+|++|||||||||+|+|++||++|+++++.+++..+++..+....|+.++++|+++ .++|
T Consensus 1 MkVIL~~dV~~lG~~GdiV~Vk~GyARN~LiP~~~Av~at~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~l~~~~i 80 (149)
T 3ofq_H 1 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTI 80 (149)
T ss_dssp CCCEESSCCSSSCCSSCCCCCCTTTTTTTTTTTTSEECCCSHHHHHHHHHHHHHHHHHHTTTTTCCCCCSTTSSCCCCCS
T ss_pred CEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 97999144115798999999873434776165684444458889999999999987767887789999986402217987
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC-CCCCCEEEEEEEEEECCCEEEEEEEEEEEC
Q ss_conf 02556543100341078999999860887686663026-564320549999996397299999999725
Q gi|254780331|r 93 IRAAGDTGYLYGSVSSRDIADLLIEEGFDVNRGQINLK-SPIKSVGIHNIMISLHADVSTTITLNVARS 160 (179)
Q Consensus 93 ~~k~~e~gkLfGsVt~~dI~~~L~~~gi~I~k~~I~l~-~pIk~~G~y~V~I~L~~~V~a~i~V~V~~~ 160 (179)
.+++|++|+||||||+.||+++|+++|++|++++|.+| +|||++|+|+|+|+||++|+++++|+|+++
T Consensus 81 ~~k~~e~gkLfGsVt~~~I~~~l~~~g~~i~k~~i~l~~~pIK~~G~~~V~v~L~~~V~a~i~v~V~~e 149 (149)
T 3ofq_H 81 ASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE 149 (149)
T ss_dssp CCCCCTTSSCCSCCCSCCSCCSSSCSSSCCCSCCSCCSSSSCCCSSCCCCCCCSSSSCCCCCCCCCCCC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCCCCCEEEEEEEEECCCEEEEEEEEEEEC
T ss_conf 764189984457426999999999859911589811788552063778999996599199999999979