HHsearch results for GI: 254780331 and protein with PDBid: 3ofq_H

>3ofq_H 50S ribosomal protein L9; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=100.00  E-value=0  Score=316.05  Aligned_cols=147  Identities=37%  Similarity=0.632  Sum_probs=142.6

Q ss_pred             EEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q ss_conf             334652011175877838882776321101437873012201468887789999984223467899998876543-2100
Q gi|254780331|r   14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLEKKAKYEGISKDLAKK-NFSL   92 (179)
Q Consensus        14 mkVIL~~dv~~lG~~Gdiv~Vk~GyaRN~LiP~~~A~~aT~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~L~~~-~l~i   92 (179)
                      |||||++||++||+.||+|+|++|||||||||+|+|++||++|+++++.+++..+++..+....|+.++++|+++ .++|
T Consensus         1 MkVIL~~dV~~lG~~GdiV~Vk~GyARN~LiP~~~Av~at~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~l~~~~i   80 (149)
T 3ofq_H            1 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTI   80 (149)
T ss_dssp             CCCEESSCCSSSCCSSCCCCCCTTTTTTTTTTTTSEECCCSHHHHHHHHHHHHHHHHHHTTTTTCCCCCSTTSSCCCCCS
T ss_pred             CEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             97999144115798999999873434776165684444458889999999999987767887789999986402217987


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCC-CCCCCEEEEEEEEEECCCEEEEEEEEEEEC
Q ss_conf             02556543100341078999999860887686663026-564320549999996397299999999725
Q gi|254780331|r   93 IRAAGDTGYLYGSVSSRDIADLLIEEGFDVNRGQINLK-SPIKSVGIHNIMISLHADVSTTITLNVARS  160 (179)
Q Consensus        93 ~~k~~e~gkLfGsVt~~dI~~~L~~~gi~I~k~~I~l~-~pIk~~G~y~V~I~L~~~V~a~i~V~V~~~  160 (179)
                      .+++|++|+||||||+.||+++|+++|++|++++|.+| +|||++|+|+|+|+||++|+++++|+|+++
T Consensus        81 ~~k~~e~gkLfGsVt~~~I~~~l~~~g~~i~k~~i~l~~~pIK~~G~~~V~v~L~~~V~a~i~v~V~~e  149 (149)
T 3ofq_H           81 ASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE  149 (149)
T ss_dssp             CCCCCTTSSCCSCCCSCCSCCSSSCSSSCCCSCCSCCSSSSCCCSSCCCCCCCSSSSCCCCCCCCCCCC
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCCCCCEEEEEEEEECCCEEEEEEEEEEEC
T ss_conf             764189984457426999999999859911589811788552063778999996599199999999979