PSIBLAST alignment of GI: 254780331 and protein with PDB id: 2hgj
gi|119389741|pdb|2HGJ|K Chain K, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. Length = 148
>gi|119389798|pdb|2HGQ|K Chain K, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. Length = 148
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Query: 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLE 73
M+VILL+ + NLG +G+VV VK GYARNYLLP+ A+ A + N E++ E
Sbjct: 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAE 60
Query: 74 KKAKYEGISKDLAKKNFSLIRAAGDTGYLYGSVSSRDIADL-LIEEGFDVNRGQINLKSP 132
+KA+ E + K L ++ AG+T +YGSV+++DIA+ + G ++ ++ L+ P
Sbjct: 61 RKAEAERLKKILENLTLTIPVRAGET-KIYGSVTAKDIAEALSRQHGVTIDPKRLALEKP 119
Query: 133 IKSVGIHNIMISLHADVSTTITLNVARST 161
IK +G + + H +V + ++V
Sbjct: 120 IKELGEYVLTYKPHPEVPIQLKVSVVAQE 148