RPSBLAST alignment of GI: 254780331 and protein with PDBid: 2j01
>2j01_I 50S ribosomal protein L9; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 2j03_I 2jl6_I 2jl8_I 2v47_I 2v49_I 2wdi_I 2wdj_I 2wdl_I 2wdn_I 2wh2_I 3hux_I 3huz_I 3f1f_I 1vsp_G 1vsa_G 2wh4_I 3d5d_I 3d5b_I 3f1h_I 2hgu_K ... Length = 148
Score = 110 bits (275), Expect = 2e-25
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLE 73
M+VILL+ + NLG +G+VV VK GYARNYLLP+ A+ A + N E++ E
Sbjct: 1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAE 60
Query: 74 KKAKYEGISKDLAKKNFSLIRAAGDTGYLYGSVSSRDIADLLIEE-GFDVNRGQINLKSP 132
+KA+ E + + L + I +YGSV+++DIA+ L + G ++ ++ L+ P
Sbjct: 61 RKAEAERLKEILENLTLT-IPVRAGETKIYGSVTAKDIAEALSRQHGVTIDPKRLALEKP 119
Query: 133 IKSVGIHNIMISLHADVSTTITLNVARS 160
IK +G + + H +V + ++V
Sbjct: 120 IKELGEYVLTYKPHPEVPIQLKVSVVAQ 147