HHsearch alignment for GI: 254780332 and conserved domain: CHL00060
>CHL00060 atpB ATP synthase CF1 beta subunit.
Probab=95.27 E-value=0.025 Score=37.18 Aligned_cols=45 Identities=33% Similarity=0.442 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 4321013776556416772677621310027699999999998510
Q gi|254780332|r 202 VSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAY 247 (504)
Q Consensus 202 i~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~ 247 (504)
T Consensus 139 leTGIkaID~l~p-igkGQRigIfggaGvGKTvLl~eli~niak~~ 183 (480)
T CHL00060 139 FETGIKVVDLLAP-YRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 183 (480)
T ss_pred HHCCHHHHHCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 1027044431254-00366887656899887899999996120037