HHsearch alignment for GI: 254780332 and conserved domain: COG0488
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].
Probab=95.59 E-value=0.2 Score=30.24 Aligned_cols=124 Identities=17% Similarity=0.253 Sum_probs=64.8
Q ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH--
Q ss_conf 776556416772677621310027699999999998510111233333212479758999585217999878999987--
Q gi|254780332|r 209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQT-- 286 (504)
Q Consensus 209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s-- 286 (504)
T Consensus 338 ~~~~s~~i~~gdrIaiiG~NG~GKSTLlk~l~g~~~~~-------~G~v~~g~~v~igyf~Q~~~~l~~~~t~~d~l~~~ 410 (530)
T COG0488 338 LKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPL-------SGTVKVGETVKIGYFDQHRDELDPDKTVLEELSEG 410 (530)
T ss_pred ECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC-------CCEEEECCCEEEEEEEEEHHHCCCCCCHHHHHHHH
T ss_conf 63726776589889998999877899999985213567-------72599579678999870031027667799999864
Q ss_pred ----------------HHCCCCCCC--CCCCHHHHHHHHHHHHHHHHCCEEEECCC--CCCHHHHHHHHHHHC
Q ss_conf ----------------410110001--21376889989999999862780782589--988999999886402
Q gi|254780332|r 287 ----------------EVPSSKIRR--GELTRPDYEKIVACSQVMQKLPLYIDQTG--GISMSQLATRARRLK 339 (504)
Q Consensus 287 ----------------~I~~~~i~~--g~l~~~e~~~i~~a~~~l~~~~l~I~d~~--~~ti~~I~~~~r~~~ 339 (504)
T Consensus 411 ~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLlLDEPTNhLDi~s~eaLe~aL~ 483 (530)
T COG0488 411 FPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALL 483 (530)
T ss_pred CCCCCHHHHHHHHHHCCCCHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 6543289999999984998679639522258779999999998566997899728987679889999999998