HHsearch alignment for GI: 254780332 and conserved domain: COG0488

>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].
Probab=95.59  E-value=0.2  Score=30.24  Aligned_cols=124  Identities=17%  Similarity=0.253  Sum_probs=64.8

Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH--
Q ss_conf             776556416772677621310027699999999998510111233333212479758999585217999878999987--
Q gi|254780332|r  209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQT--  286 (504)
Q Consensus       209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s--  286 (504)
T Consensus       338 ~~~~s~~i~~gdrIaiiG~NG~GKSTLlk~l~g~~~~~-------~G~v~~g~~v~igyf~Q~~~~l~~~~t~~d~l~~~  410 (530)
T COG0488         338 LKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPL-------SGTVKVGETVKIGYFDQHRDELDPDKTVLEELSEG  410 (530)
T ss_pred             ECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC-------CCEEEECCCEEEEEEEEEHHHCCCCCCHHHHHHHH
T ss_conf             63726776589889998999877899999985213567-------72599579678999870031027667799999864


Q ss_pred             ----------------HHCCCCCCC--CCCCHHHHHHHHHHHHHHHHCCEEEECCC--CCCHHHHHHHHHHHC
Q ss_conf             ----------------410110001--21376889989999999862780782589--988999999886402
Q gi|254780332|r  287 ----------------EVPSSKIRR--GELTRPDYEKIVACSQVMQKLPLYIDQTG--GISMSQLATRARRLK  339 (504)
Q Consensus       287 ----------------~I~~~~i~~--g~l~~~e~~~i~~a~~~l~~~~l~I~d~~--~~ti~~I~~~~r~~~  339 (504)
T Consensus       411 ~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLlLDEPTNhLDi~s~eaLe~aL~  483 (530)
T COG0488         411 FPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALL  483 (530)
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             6543289999999984998679639522258779999999998566997899728987679889999999998