HHsearch alignment for GI: 254780332 and conserved domain: COG0563
>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism].
Probab=94.25 E-value=0.2 Score=30.29 Aligned_cols=145 Identities=22% Similarity=0.268 Sum_probs=62.6
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 77621310027699999999998510111233333212479758999585217-99987899998741011000121376
Q gi|254780332|r 222 IIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSS-EQLATRIISEQTEVPSSKIRRGELTR 300 (504)
Q Consensus 222 ~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~-~el~~R~is~~s~I~~~~i~~g~l~~ 300 (504)
T Consensus 3 iiilG~pGaGK~T~A~~La~~~----~i~hl----------stgd~~r~~~~~~t~lg~~~k~--------~i~~g~lv~ 60 (178)
T COG0563 3 ILILGPPGAGKSTLAKKLAKKL----GLPHL----------DTGDILRAAIAERTELGEEIKK--------YIDKGELVP 60 (178)
T ss_pred EEEECCCCCCHHHHHHHHHHHC----CCCEE----------CCCCCCCHHHCCCCHHHHHHHH--------HHHCCCCCC
T ss_conf 9998999998899999999976----99785----------5220111100323689999999--------987589504
Q ss_pred HHH--HHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCC-CCCEEE-ECCHH--HC-CCCCCC--CCHHHHHHHH
Q ss_conf 889--989999999862780782589988999999886402244-474677-67135--32-566443--2113788999
Q gi|254780332|r 301 PDY--EKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQR-GLDLLI-VDYIQ--LM-TTSKKI--EENRVLEITG 371 (504)
Q Consensus 301 ~e~--~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~-gi~~vv-IDYLq--li-~~~~~~--~~~r~~~i~~ 371 (504)
T Consensus 61 d~i~~~~v~~rl~~~d~~~~~I~dg~PR~~~qa~~l~r~l~~~g~~~d~v~~~~~~~~~~~~r~~~r~~r~dd~~~---~ 137 (178)
T COG0563 61 DEIVNGLVKERLDEADCKAGFILDGFPRTLCQARALKRLLKELGVRLDMVIELDVPEELLLERLLGRRVREDDNEE---T 137 (178)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCHH---H
T ss_conf 1769979999997506577299989983699999999999863998552602447789999997366543346789---9
Q ss_pred HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999999999882791999771
Q gi|254780332|r 372 ITMALKALAKELNIPIIALSQ 392 (504)
Q Consensus 372 is~~lK~lA~e~~ipvi~lsQ 392 (504)
T Consensus 138 ~~~R~~~y-~~~~~pl~~~y~ 157 (178)
T COG0563 138 VKKRLKVY-HEQTAPLIEYYS 157 (178)
T ss_pred HHHHHHHH-HHCCCCEEEEEE
T ss_conf 99999998-754683477775