HHsearch alignment for GI: 254780332 and conserved domain: COG1124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
Probab=95.85 E-value=0.092 Score=32.89 Aligned_cols=170 Identities=22% Similarity=0.263 Sum_probs=87.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH------------
Q ss_conf 13776556416772677621310027699999999998510111233333212479758999585217------------
Q gi|254780332|r 207 QTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSS------------ 274 (504)
Q Consensus 207 ~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~------------ 274 (504)
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~-~p-------------~~G-~I~~~G~~~~~~~~~~~~~~~VQ 85 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLE-KP-------------SSG-SILLDGKPLAPKKRAKAFYRPVQ 85 (252)
T ss_pred HHHCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC-CC-------------CCC-EEEECCCCCCCCCCCHHHCCCEE
T ss_conf 4414325996489789998489898889999995656-78-------------886-28988840576653033304506
Q ss_pred ------------HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC-CCCHHHHH--HHHHHHC
Q ss_conf ------------99987899998741011000121376889989999999862780782589-98899999--9886402
Q gi|254780332|r 275 ------------EQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTG-GISMSQLA--TRARRLK 339 (504)
Q Consensus 275 ------------~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~-~~ti~~I~--~~~r~~~ 339 (504)
T Consensus 86 mVFQDp~~SLnP~~tv~~~l~Epl~-------~~~~~~~~-~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~ 157 (252)
T COG1124 86 MVFQDPYSSLNPRRTVGRILSEPLR-------PHGLSKSQ-QRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALI 157 (252)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHC-------CCCCCHHH-HHHHHHHHHCCCCHHHHHCCCHHCCHHHHHHHHHHHHHC
T ss_conf 9951872246841019899742430-------37753789-999999998499989985394212816899999999863
Q ss_pred CCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 24447467767135325664432113788999999999999882791999771382201689999840101432422331
Q gi|254780332|r 340 RQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQD 419 (504)
Q Consensus 340 ~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqd 419 (504)
T Consensus 158 --~~PklLIlD-----EptSa-LD~siQ--a~IlnlL~~l~~~~~lt~l~IsH-------------------dl~~v~~~ 208 (252)
T COG1124 158 --PEPKLLILD-----EPTSA-LDVSVQ--AQILNLLLELKKERGLTYLFISH-------------------DLALVEHM 208 (252)
T ss_pred --CCCCEEEEC-----CCHHH-HCHHHH--HHHHHHHHHHHHHCCCEEEEEEC-------------------CHHHHHHH
T ss_conf --688879953-----82344-158899--99999999999861945999967-------------------29999988
Q ss_pred CCEEEEEEC
Q ss_conf 387889725
Q gi|254780332|r 420 ADVVLFVIR 428 (504)
Q Consensus 420 AD~v~~l~R 428 (504)
T Consensus 209 cdRi~Vm~~ 217 (252)
T COG1124 209 CDRIAVMDN 217 (252)
T ss_pred HHHEEEEEC
T ss_conf 535254007