HHsearch alignment for GI: 254780332 and conserved domain: COG1126
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].
Probab=94.58 E-value=0.35 Score=28.42 Aligned_cols=175 Identities=19% Similarity=0.280 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC-C-CH-HHH-HHHH
Q ss_conf 013776556416772677621310027699999999998510111233333212479758999585-2-17-999-8789
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE-M-SS-EQL-ATRI 281 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE-M-s~-~el-~~R~ 281 (504)
T Consensus 15 ~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~--LE------------~~~~G-~I~-i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 15 KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNG--LE------------EPDSG-SIT-VDGEDVGDKKDILKLRRK 78 (240)
T ss_pred EEEECCCCEEECCCCEEEEECCCCCCHHHHHHHHHC--CC------------CCCCC-EEE-ECCEECCCHHHHHHHHHH
T ss_conf 177648511673897899989999988899999977--86------------88786-499-998722545469999985
Q ss_pred H-------------HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEE--EECCC-CCC--HHHHHHHHHHHCCCCC
Q ss_conf 9-------------9987410110001213768899899999998627807--82589-988--9999998864022444
Q gi|254780332|r 282 I-------------SEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLY--IDQTG-GIS--MSQLATRARRLKRQRG 343 (504)
Q Consensus 282 i-------------s~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~--I~d~~-~~t--i~~I~~~~r~~~~~~g 343 (504)
T Consensus 79 vGmVFQ~fnLFPH~TvleNv~lap~~v~~~~k~e--A~~~A~~lL~~VGL~dka~~yP~qLSGGQqQRVAIARALaM--~ 154 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAE--AREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAM--D 154 (240)
T ss_pred CCEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCC--C
T ss_conf 5766246654655329888777539972989999--99999999998695566653951048078899999998717--9
Q ss_pred CCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEE
Q ss_conf 74677671353256644321137889999999999998827919997713822016899998401014324223313878
Q gi|254780332|r 344 LDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVV 423 (504)
Q Consensus 344 i~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v 423 (504)
T Consensus 155 P~vmLFD-----EPTSAL-D--PElv~EVL~vm~~LA~eG-mTMivVTH-------------------EM~FAr~Vadrv 206 (240)
T COG1126 155 PKVMLFD-----EPTSAL-D--PELVGEVLDVMKDLAEEG-MTMIIVTH-------------------EMGFAREVADRV 206 (240)
T ss_pred CCEEEEC-----CCCCCC-C--HHHHHHHHHHHHHHHHCC-CEEEEEEC-------------------HHHHHHHHHHEE
T ss_conf 9888636-----975437-9--889999999999999769-86999950-------------------367999862228
Q ss_pred EEEEC
Q ss_conf 89725
Q gi|254780332|r 424 LFVIR 428 (504)
Q Consensus 424 ~~l~R 428 (504)
T Consensus 207 iFmd~ 211 (240)
T COG1126 207 IFMDQ 211 (240)
T ss_pred EEEEC
T ss_conf 99528