HHsearch alignment for GI: 254780332 and conserved domain: COG1132
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].
Probab=94.36 E-value=0.18 Score=30.66 Aligned_cols=178 Identities=23% Similarity=0.295 Sum_probs=88.3
Q ss_pred CCCCCH----HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE---CCCCH
Q ss_conf 432101----37765564167726776213100276999999999985101112333332124797589995---85217
Q gi|254780332|r 202 VSTGIQ----TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYS---LEMSS 274 (504)
Q Consensus 202 i~TG~~----~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fS---lEMs~ 274 (504)
T Consensus 334 v~f~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~-~~--------------~~G~I~idg~dI~~i~~ 398 (567)
T COG1132 334 VSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLY-DP--------------TSGEILIDGIDIRDISL 398 (567)
T ss_pred EEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHC-CC--------------CCCEEEECCEEHHHCCH
T ss_conf 7897599876110522775489878885588885789999998615-88--------------88369899997775385
Q ss_pred HHHHHHHHHHHH-------HHCCCCCCCCC--CCHHHHHHHHHH---HHHHHHCC----EEEECC-CCCCHHH--HHHHH
Q ss_conf 999878999987-------41011000121--376889989999---99986278----078258-9988999--99988
Q gi|254780332|r 275 EQLATRIISEQT-------EVPSSKIRRGE--LTRPDYEKIVAC---SQVMQKLP----LYIDQT-GGISMSQ--LATRA 335 (504)
Q Consensus 275 ~el~~R~is~~s-------~I~~~~i~~g~--l~~~e~~~i~~a---~~~l~~~~----l~I~d~-~~~ti~~--I~~~~ 335 (504)
T Consensus 399 ~~lr~~-i~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQriaiA 477 (567)
T COG1132 399 DSLRKR-IGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIA 477 (567)
T ss_pred HHHHHH-EEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHH
T ss_conf 678878-2354664277776699997457889999999999999486378984766678360578871889999999999
Q ss_pred HHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 64022444746776713532566443211378899999999999988279199977138220168999984010143242
Q gi|254780332|r 336 RRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGS 415 (504)
Q Consensus 336 r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~ 415 (504)
T Consensus 478 Rall~--~~~iLILD-----EaTS~l-D~~tE--~~I~~~l~~l~~~-rT~ii-IaH-----------Rls--------t 526 (567)
T COG1132 478 RALLR--NPPILILD-----EATSAL-DTETE--ALIQDALKKLLKG-RTTLI-IAH-----------RLS--------T 526 (567)
T ss_pred HHHHH--CCCEEEEC-----CHHHCC-CHHHH--HHHHHHHHHHHCC-CEEEE-EEC-----------CCC--------H
T ss_conf 99703--69868872-----311026-77569--9999999998269-87999-866-----------722--------5
Q ss_pred HHHHCCEEEEEE
Q ss_conf 233138788972
Q gi|254780332|r 416 IEQDADVVLFVI 427 (504)
Q Consensus 416 IEqdAD~v~~l~ 427 (504)
T Consensus 527 i~~-aD~IiVl~ 537 (567)
T COG1132 527 IKN-ADRIIVLD 537 (567)
T ss_pred HHH-CCEEEEEE
T ss_conf 874-88899975