HHsearch alignment for GI: 254780332 and conserved domain: COG1136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].
Probab=96.96 E-value=0.031 Score=36.46 Aligned_cols=158 Identities=19% Similarity=0.259 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC---CCCHHHHH---H
Q ss_conf 01377655641677267762131002769999999999851011123333321247975899958---52179998---7
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL---EMSSEQLA---T 279 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl---EMs~~el~---~ 279 (504)
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTL-Lniig~ld~p--------------t~G~v~i~g~~~~~l~~~~~~~~R~ 82 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTL-LNLLGGLDKP--------------TSGEVLINGKDLTKLSEKELAKLRR 82 (226)
T ss_pred EEECCCCEEEECCCCEEEEECCCCCCHHHH-HHHHHCCCCC--------------CCCEEEECCEECCCCCHHHHHHHHH
T ss_conf 675246258874998999989999989999-9999646678--------------8846999988867589889999977
Q ss_pred HHHHHHH-------------HHCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCEE--EE-CCC-CCCHHH--HHHHHHHHC
Q ss_conf 8999987-------------41011000121376889989999999862-7807--82-589-988999--999886402
Q gi|254780332|r 280 RIISEQT-------------EVPSSKIRRGELTRPDYEKIVACSQVMQK-LPLY--ID-QTG-GISMSQ--LATRARRLK 339 (504)
Q Consensus 280 R~is~~s-------------~I~~~~i~~g~l~~~e~~~i~~a~~~l~~-~~l~--I~-d~~-~~ti~~--I~~~~r~~~ 339 (504)
T Consensus 83 ~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~----~~~~~~~~l~~~lgl~~~~~~~~p~~LSGGqqQRVAIARAL~ 158 (226)
T COG1136 83 KKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAG----RRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHCCCHHHHCCCCCHHCCHHHHHHHHHHHHHH
T ss_conf 7489987567778988899999869987478736----799999999986698123235881226979999999999982
Q ss_pred CCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 24447467767135325664432113788999999999999882791999771
Q gi|254780332|r 340 RQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQ 392 (504)
Q Consensus 340 ~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQ 392 (504)
T Consensus 159 --~~P~iilAD-----EPTgnLD~~t---~~~V~~ll~~~~~~~g~tii~VTH 201 (226)
T COG1136 159 --NNPKIILAD-----EPTGNLDSKT---AKEVLELLRELNKERGKTIIMVTH 201 (226)
T ss_pred --CCCCEEEEE-----CCCCCCCHHH---HHHHHHHHHHHHHHCCCEEEEECC
T ss_conf --499869960-----7666588678---999999999998746989999908