HHsearch alignment for GI: 254780332 and conserved domain: COG1157
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=93.77 E-value=0.23 Score=29.87 Aligned_cols=42 Identities=31% Similarity=0.514 Sum_probs=31.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCC-EEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 644321013776556416772-67762131002769999999999
Q gi|254780332|r 200 AGVSTGIQTLDKQMGGLQRSD-LIIIAGRPGMGKTSLATNIAYNV 243 (504)
Q Consensus 200 ~Gi~TG~~~LD~~~gGl~~G~-l~Viaarpg~GKTalalniA~~~ 243 (504)
T Consensus 145 ~~l~tGVRaIDgllT-~G~GQRiGIFAg-sGVGKStLLgMiar~t 187 (441)
T COG1157 145 EPLDTGVRAIDGLLT-CGKGQRIGIFAG-SGVGKSTLLGMIARNT 187 (441)
T ss_pred CCCCCCCEEEECCCC-CCCCCEEEEEEC-CCCCHHHHHHHHHCCC
T ss_conf 645456144401002-246746788716-9986899999996246