HHsearch alignment for GI: 254780332 and conserved domain: COG1618

Probab=94.79  E-value=0.043  Score=35.38  Aligned_cols=147  Identities=27%  Similarity=0.443  Sum_probs=74.3

Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC---
Q ss_conf             77621310027699999999998510111233333212479758-99958521799987899998741011000121---
Q gi|254780332|r  222 IIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIV-GFYSLEMSSEQLATRIISEQTEVPSSKIRRGE---  297 (504)
Q Consensus       222 ~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~V-l~fSlEMs~~el~~R~is~~s~I~~~~i~~g~---  297 (504)
T Consensus         8 i~ITG~PGvGKtTl~~ki~e~L~~---------------~g~kvgGf~t~EVR~g--Gk-----R~GF~Ivdl~tg~~~~   65 (179)
T COG1618           8 IFITGRPGVGKTTLVLKIAEKLRE---------------KGYKVGGFITPEVREG--GK-----RIGFKIVDLATGEEGI   65 (179)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEEEEEEEECC--CE-----EEEEEEEECCCCCEEE
T ss_conf             998679984589999999999985---------------5966513983114208--82-----7515999814795579


Q ss_pred             CCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH-HHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             3768899899999998627807825899889999998-864022444746776713532566443211378899999999
Q gi|254780332|r  298 LTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATR-ARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMAL  376 (504)
Q Consensus       298 l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~-~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~l  376 (504)
T Consensus        66 la~~~~-----~~~rvGkY~V~v~~-----le~i~~~al~rA~-~-~aDvIIIDEIGpMElks~~f---~~~ve~v----  126 (179)
T COG1618          66 LARVGF-----SRPRVGKYGVNVEG-----LEEIAIPALRRAL-E-EADVIIIDEIGPMELKSKKF---REAVEEV----  126 (179)
T ss_pred             EEECCC-----CCCCCCEEEEEHHH-----HHHHHHHHHHHHH-H-CCCEEEEECCCCHHHCCHHH---HHHHHHH----
T ss_conf             888478-----87621047862788-----8998689999886-3-49989994336330200889---9999999----


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
Q ss_conf             99998827919997713822016899998401014324223313878897
Q gi|254780332|r  377 KALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFV  426 (504)
Q Consensus       377 K~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l  426 (504)
T Consensus       127 ----l~~~kpliatlH--r-----rsr~P~v~~ik~~~------~v~v~l  159 (179)
T COG1618         127 ----LKSGKPLIATLH--R-----RSRHPLVQRIKKLG------GVYVFL  159 (179)
T ss_pred             ----HCCCCCEEEEEE--C-----CCCCHHHHHHHHCC------CEEEEE
T ss_conf             ----658993799996--2-----56775899864248------779997