HHsearch alignment for GI: 254780332 and conserved domain: KOG0054

Probab=93.64  E-value=0.65  Score=26.39  Aligned_cols=109  Identities=18%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCCCCCEE---EEEECCCCHHHHHHHHHHHHH
Q ss_conf             16772677621310027699999999998510------111233333212479758---999585217999878999987
Q gi|254780332|r  216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAY------KAELQTDGSYKTINGGIV---GFYSLEMSSEQLATRIISEQT  286 (504)
Q Consensus       216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~------~~~~~~~~~~~~~~g~~V---l~fSlEMs~~el~~R~is~~s  286 (504)
T Consensus       544 i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gs~aYv~Q~pWI~ng-TvreNILFG~~~d~~rY~~Vi~aC~L  622 (1381)
T KOG0054         544 IKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNG-TVRENILFGSPYDEERYDKVIKACAL  622 (1381)
T ss_pred             ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCHHHCC-CHHHHHCCCCCCCHHHHHHHHHHCCC
T ss_conf             62898899989998888999999965875567559984748986665564178-56675006870359999999997067


Q ss_pred             HHCCCCC---------CCC-CCCHHHHHHHHHHHHHHHHCCEEEECCCC
Q ss_conf             4101100---------012-13768899899999998627807825899
Q gi|254780332|r  287 EVPSSKI---------RRG-ELTRPDYEKIVACSQVMQKLPLYIDQTGG  325 (504)
Q Consensus       287 ~I~~~~i---------~~g-~l~~~e~~~i~~a~~~l~~~~l~I~d~~~  325 (504)
T Consensus       623 ~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDpl  671 (1381)
T KOG0054         623 KKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPL  671 (1381)
T ss_pred             HHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             7679746898753577886277676999999999986579989887963