HHsearch alignment for GI: 254780332 and conserved domain: KOG0744
>KOG0744 consensus.
Probab=94.50 E-value=0.46 Score=27.58 Aligned_cols=71 Identities=27% Similarity=0.323 Sum_probs=45.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 72677621310027699999999998510111233333212479758999585217999878999987410110001213
Q gi|254780332|r 219 SDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGEL 298 (504)
Q Consensus 219 G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l 298 (504)
T Consensus 177 NRliLlhGPPGTGKTSLCKaLaQkLSIR~~----------~~y~~~~li---EinshsLFSKWFs----------ESgKl 233 (423)
T KOG0744 177 NRLILLHGPPGTGKTSLCKALAQKLSIRTN----------DRYYKGQLI---EINSHSLFSKWFS----------ESGKL 233 (423)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHEEEEC----------CCCCCCEEE---EEEHHHHHHHHHH----------HHHHH
T ss_conf 148998579998822799999875146523----------764440699---9704678898871----------21138
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 76889989999999
Q gi|254780332|r 299 TRPDYEKIVACSQV 312 (504)
Q Consensus 299 ~~~e~~~i~~a~~~ 312 (504)
T Consensus 234 V~kmF~kI~ELv~d 247 (423)
T KOG0744 234 VAKMFQKIQELVED 247 (423)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999717