HHsearch alignment for GI: 254780332 and conserved domain: KOG1433

>KOG1433 consensus.
Probab=98.19  E-value=0.00012  Score=54.86  Aligned_cols=167  Identities=24%  Similarity=0.319  Sum_probs=88.0

Q ss_pred             CCCCCCCCCHHHHHHH-HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHH
Q ss_conf             3664432101377655-641677267762131002769999999999851011123333321247975899958521799
Q gi|254780332|r  198 RLAGVSTGIQTLDKQM-GGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQ  276 (504)
Q Consensus       198 ~~~Gi~TG~~~LD~~~-gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~e  276 (504)
T Consensus        89 ~~~~l~Tg~~~lD~lL~gGi~~g~~TEi~G~p~~GKtQlc~~~~v~~~---------------gge~~~l~IDs~s~-~~  152 (326)
T KOG1433          89 ELGFLSTGSKALDKLLGGGIETGSLTELVGPPGSGKTQLCHTLAVTCG---------------GGEGKVLYIDTEST-FR  152 (326)
T ss_pred             CCEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC---------------CCCCEEEEEECCHH-CC
T ss_conf             762541550556677426755583568855898447788889988706---------------87511899952111-03


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHH-HC
Q ss_conf             98789999874101100012137688998999999986278078258998899999988640224447467767135-32
Q gi|254780332|r  277 LATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQ-LM  355 (504)
Q Consensus       277 l~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLq-li  355 (504)
T Consensus       153 -~~~~~~ia~~~~~~~~~-------~~~~l~~~~~~----~---~~~---~l~~~~~a~-~~~~~~~~~l~~vds~ta~~  213 (326)
T KOG1433         153 -LERLTEIAGRSGLRGRD-------TLSNLMLARAY----N---LDH---QLQLIQEAE-IMINQSRVKLLIVDSATALY  213 (326)
T ss_pred             -CCHHHHHHHHHHHHHHH-------HHHHHHHHHHH----H---HHH---HHHHHHHHH-HHHHCCCEEEEEECCCCCCC
T ss_conf             -32113566663030677-------88888999998----5---666---777799999-98620311699941345411


Q ss_pred             CCCCCCCCH---HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf             566443211---37889999999999998827919997713822016
Q gi|254780332|r  356 TTSKKIEEN---RVLEITGITMALKALAKELNIPIIALSQLSRQVEN  399 (504)
Q Consensus       356 ~~~~~~~~~---r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~  399 (504)
T Consensus       214 ~~~~~g~~~~~a~~~~~~~~~~~l~~la~~~g~~vvitn~v~~~~d~  260 (326)
T KOG1433         214 RTTFKGRGELSARQMLLAKFLRSLKKLADEFGVAVVITNQVTAQVDG  260 (326)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf             33106652157889999999999988888618617986220234566