HHsearch alignment for GI: 254780332 and conserved domain: PRK05642
>PRK05642 DNA replication initiation factor; Validated.
Probab=94.36 E-value=0.49 Score=27.38 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=26.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 26776213100276999999999985101112333332124797589995852
Q gi|254780332|r 220 DLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM 272 (504)
Q Consensus 220 ~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM 272 (504)
T Consensus 46 ~~l~i~G~~G~GKTHLL~A~~~~~~~---------------~~~~~~yl~~~~ 83 (234)
T PRK05642 46 SLIYLWGKDGVGRSHLLQAACLRFEQ---------------RGEPAVYLPLAE 83 (234)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHH---------------CCCCEEEEEHHH
T ss_conf 83899889999889999999999980---------------799679978999