HHsearch alignment for GI: 254780332 and conserved domain: PRK05748
>PRK05748 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=920.66 Aligned_cols=442 Identities=44% Similarity=0.699 Sum_probs=418.2
Q ss_pred CHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHC
Q ss_conf 01026789978999999999832978999999442966637988899999999999839986864388897317983235
Q gi|254780332|r 17 SSQYRESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGEL 96 (504)
Q Consensus 17 ~~~~~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~i 96 (504)
T Consensus 4 ~~~~r~pP~n~EAE~aVLGalL~~~~~~~~v~~~L~~edFy~~~H~~If~aI~~L~~~g~~iD~vtv~~~L~~~g~l~~i 83 (448)
T PRK05748 4 VAALRVPPHSIEAEQAVLGAIFLDNDALIRVSEFLSPDDFYRHAHRLIFRAMLKLSDRGEPIDVVTVREILDDQGDLEEV 83 (448)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC
T ss_conf 54467999989999999999985901799998516987789889999999999999769998899999999766973431
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 94899999996221122236778787899999999987655677512344453156668765544443201134466543
Q gi|254780332|r 97 TVPQYLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFH 176 (504)
Q Consensus 97 gg~~yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~ 176 (504)
T Consensus 84 Gg~~yL~~L~~~~~s~~n~~~ya~iVke~~~~R~li~~~~~i~~~a~~~~~--~~~~il~~ae~~l~~i~~~~-~~~~~~ 160 (448)
T PRK05748 84 GGLSYLVELANSVPTAANIEYYAKIVREKATLRRLIRTATEIANSAYEPER--DADEILDEAEKKIFEVAEAR-NKSGFK 160 (448)
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHCC-CCCCCE
T ss_conf 769999999963887556999999999999999999999999997427888--88999999999999998436-877754
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 01343367789999987411236644321013776556416772677621310027699999999998510111233333
Q gi|254780332|r 177 TFSDAMTVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGS 256 (504)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~ 256 (504)
T Consensus 161 ~~~d~l~~~~~~ie~~~~~~~~~~Gi~TG~~~LD~~~~G~~~g~LiviaaRP~mGKTa~alnia~~~a~~---------- 230 (448)
T PRK05748 161 NIKDVLVKAYDRIEMLFNQTGDITGIPTGFRDLDKMTSGLQPNDLIIVAARPSVGKTAFALNIAQNVATK---------- 230 (448)
T ss_pred EHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH----------
T ss_conf 4999999999999999718999761057827899982798867379998479987689999999999985----------
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 21247975899958521799987899998741011000121376889989999999862780782589988999999886
Q gi|254780332|r 257 YKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRAR 336 (504)
Q Consensus 257 ~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r 336 (504)
T Consensus 231 ----~~~~v~~fSlEM~~~~l~~R~la~~s~v~~~~i~~g~l~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r 306 (448)
T PRK05748 231 ----TDKNVAIFSLEMGAESLVMRMLCAEGRIDQQKLRTGQLTDEDWPKLTIAVGSLSDAPIYIDDTPGIKVTEIRARCR 306 (448)
T ss_pred ----CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
T ss_conf ----6980899817788889999999997467777776289999999999999999865983785589886899999999
Q ss_pred HHCCCCC-CCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 4022444-746776713532566443211378899999999999988279199977138220168999984010143242
Q gi|254780332|r 337 RLKRQRG-LDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGS 415 (504)
Q Consensus 337 ~~~~~~g-i~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~ 415 (504)
T Consensus 307 ~~~~~~~~~~~vviDYlqli~~~~~~~~~r~~ev~~isr~lK~lAkel~ipvi~lsQLnR~~e~R~~krP~lsDLr~SG~ 386 (448)
T PRK05748 307 RLAQEHGGLGLIVIDYLQLIQGSGRSGENRQQEVSEISRSLKALAKELKVPVIALSQLSRGVEQRQDKRPVMSDIRESGS 386 (448)
T ss_pred HHHHHCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99997599889997168644777877643999999999999999999699889970268432225899987545224453
Q ss_pred HHHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCC
Q ss_conf 2331387889725566164423333222111000000112338838999974089972599999746854020077446
Q gi|254780332|r 416 IEQDADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSS 494 (504)
Q Consensus 416 IEqdAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~ 494 (504)
T Consensus 387 IEqdAD~v~~l~R~~~y~~~~~-------------------~~~~~e~ivaKnR~G~~g~v~~~f~~~~~rf~~~~~~~ 446 (448)
T PRK05748 387 IEQDADIVAFLYRDDYYDEETE-------------------NKNTIEIIIGKQRNGPVGTVRLAFQKEYNKFVNLARRE 446 (448)
T ss_pred CHHHCCEEEEECCHHHCCCCCC-------------------CCCEEEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCC
T ss_conf 0320768989653432388888-------------------89827999972689986059999867878720400065