HHsearch alignment for GI: 254780332 and conserved domain: PRK06749
>PRK06749 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=863.62 Aligned_cols=423 Identities=34% Similarity=0.525 Sum_probs=382.3
Q ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCHHHHH
Q ss_conf 89978999999999832978999999442966637988899999999999839986864388897317983235948999
Q gi|254780332|r 23 SPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGELTVPQYL 102 (504)
Q Consensus 23 ~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~igg~~yL 102 (504)
T Consensus 2 ~~hniEAEqaVLGalLld~~~i~~v--~L~~e~Fy~~~H~~If~ai~~L~~~g~piD~vTv~~~L~~-~~L~~iGG~~yL 78 (428)
T PRK06749 2 SIQNVEAEKTVLGSLLLDGELIKEC--RLTEQYFSMPVHKSIFQLMRKMEDEGQPIDLVTFISRVDP-NFLKGIGGMEYF 78 (428)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCEEE--EECHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC-CCHHHCCCHHHH
T ss_conf 8547999999999998280400015--4087887978899999999999977999889999998754-335443879999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 99996221122236778787899999999987655677512344453156668765544443201134466543013433
Q gi|254780332|r 103 ARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFHTFSDAM 182 (504)
Q Consensus 103 ~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~~~~~~~ 182 (504)
T Consensus 79 ~~L~~~~ps~an~~~Ya~iVke~~~~R~l~~~~~~~~~~~~~~----~~~~~i~~~~~~l~~~~~~~~~--~~~~~~~~l 152 (428)
T PRK06749 79 IGLMDGVPTTSNFSYYEGLVRGAWKMYQAGVLGHKMGERLIAE----KDEKIIGETITALCELEEKDCV--CEFDLKDAL 152 (428)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHCCCCC--CCCCHHHHH
T ss_conf 9999718877889999999999999999999999999876346----1578999999999998624876--754289999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 67789999987411236644321013776556416772677621310027699999999998510111233333212479
Q gi|254780332|r 183 TVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTING 262 (504)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g 262 (504)
T Consensus 153 ~~~~---e~~~~~~~~~~Gi~TGf~~LD~lt~Gl~~g~LiviaaRPsmGKTa~alnia~~~a~---------------~g 214 (428)
T PRK06749 153 VDLY---EELHQDVKEITGIETGYTSLNKMTCGLQEGDFVVLGARPSMGKTAFALNVGLHAAK---------------SG 214 (428)
T ss_pred HHHH---HHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH---------------CC
T ss_conf 9999---99984649987687783889875249998868999627989768999999999996---------------49
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 75899958521799987899998741011000121--3768899899999998627807825899889999998864022
Q gi|254780332|r 263 GIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGE--LTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKR 340 (504)
Q Consensus 263 ~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~--l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~ 340 (504)
T Consensus 215 ~~v~~fSlEMs~~~l~~R~ls~~s~v~~~~i~~~~~~~~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~ 294 (428)
T PRK06749 215 AAVGLFSLEMSSKQLLKRMASCVGEVSGGRLKNPKHRFAMEDWEKVSKAFAEIGELPLEIYDNAGVTVQDIWMQTRKLKR 294 (428)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 92799837899999999999975499888862776779999999999999998559659975899767999999999999
Q ss_pred CCCCC--EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 44474--6776713532566443211378899999999999988279199977138220168999984010143242233
Q gi|254780332|r 341 QRGLD--LLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQ 418 (504)
Q Consensus 341 ~~gi~--~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEq 418 (504)
T Consensus 295 ~~g~~~~livIDYlqLi~~~~~~~~~r~~ev~~isr~lK~lAkel~vpvi~lsQLnR~~e~r~dkrP~lsDLreSG~IEq 374 (428)
T PRK06749 295 KHGDKKVLIIVDYLQLITGDPKHKGNRFQEISEISRKLKLLARELNVCVVALSQLSRSVESRQDKRPLLSDLRETGQIEQ 374 (428)
T ss_pred HCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHH
T ss_conf 74998769997677650578777778999999999999999999699899971378552337899976012103330244
Q ss_pred HCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECC
Q ss_conf 1387889725566164423333222111000000112338838999974089972599999746854020077
Q gi|254780332|r 419 DADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALS 491 (504)
Q Consensus 419 dAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~ 491 (504)
T Consensus 375 dAD~v~~l~R~~~y~~~~~-------------------~~~~~eiivaKnR~G~~G~v~~~f~~~~~~F~~~e 428 (428)
T PRK06749 375 DADVIMLMYREDYYDKETM-------------------QKEMTEIHVAKHRNGPVGSFKLRFLKEFGRFVEGE 428 (428)
T ss_pred HCCEEEEECCHHHCCCCCC-------------------CCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCC
T ss_conf 2778999724310487767-------------------88825999972589997069999976867131789