HHsearch alignment for GI: 254780332 and conserved domain: PRK08082
>PRK08082 consensus.
Probab=100.00 E-value=0 Score=929.01 Aligned_cols=446 Identities=42% Similarity=0.665 Sum_probs=420.4
Q ss_pred CCHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHH
Q ss_conf 30102678997899999999983297899999944296663798889999999999983998686438889731798323
Q gi|254780332|r 16 DSSQYRESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGE 95 (504)
Q Consensus 16 ~~~~~~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~ 95 (504)
T Consensus 3 ~~~~~r~pP~niEAEqaVLGalL~d~~~~~~i~~~L~~edFy~~~H~~If~ai~~L~~~g~~iD~iTV~~~L~~~~~l~~ 82 (453)
T PRK08082 3 DLFADRTPPQNIEAEQAVLGAIFLEPDALTTASELLIPDDFYRTSHQKIFEVMLGLSDKGEPVDLVTVTSALADQGLLEE 82 (453)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH
T ss_conf 52126899998999999999998394279999851498878988999999999999977999889999999852698143
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 59489999999622112223677878789999999998765567751234445315666876554444320113446654
Q gi|254780332|r 96 LTVPQYLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGF 175 (504)
Q Consensus 96 igg~~yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~ 175 (504)
T Consensus 83 iGG~~yL~~L~~~~~s~an~~~Ya~iVke~a~~R~li~~~~~i~~~a~~~~~--~~~~ll~~ae~~l~~i~~~~~-~~~~ 159 (453)
T PRK08082 83 VGGVSYLTELAESVPTAANVEYYARIVEEKSLLRRLIRTATHIAQDGYERED--EVDGLLDEAEKKILEVSQRKN-SGAF 159 (453)
T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHCCC-CCCC
T ss_conf 1789999999970776678999999999999999999999999986305766--789999999999999973357-8885
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 30134336778999998741123664432101377655641677267762131002769999999999851011123333
Q gi|254780332|r 176 HTFSDAMTVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDG 255 (504)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~ 255 (504)
T Consensus 160 ~~~~d~l~~~~~~ie~~~~~~g~~~Gi~TGf~~LD~lt~G~~~g~LiviaaRPsmGKTa~alnia~~~a~~--------- 230 (453)
T PRK08082 160 QNIKDVLVDTYDNIELLHNRKGDITGIPTGFTELDRMTAGFQRNDLIIVAARPSVGKTAFALNIAQNVATK--------- 230 (453)
T ss_pred EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH---------
T ss_conf 53999999999999999837899775548848888641477758579998678875789999999999985---------
Q ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH
Q ss_conf 32124797589995852179998789999874101100012137688998999999986278078258998899999988
Q gi|254780332|r 256 SYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRA 335 (504)
Q Consensus 256 ~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~ 335 (504)
T Consensus 231 -----~~~~V~~fSlEM~~~~l~~R~la~~s~i~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~idd~~~~~i~~i~~~~ 305 (453)
T PRK08082 231 -----TDENVAIFSLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWGKLTMAMGSLSNAGIYIDDTPGIRVNEIRAKC 305 (453)
T ss_pred -----CCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
T ss_conf -----599489973138989999999971558886677518999999999999999850697389789999899999999
Q ss_pred HHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 64022444746776713532566443211378899999999999988279199977138220168999984010143242
Q gi|254780332|r 336 RRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGS 415 (504)
Q Consensus 336 r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~ 415 (504)
T Consensus 306 r~~~~~~~~~livIDYlqLi~~~~~~~~~r~~ev~~isr~LK~lAkel~ipvi~lsQLnR~~e~R~~krP~lsDLreSG~ 385 (453)
T PRK08082 306 RRLKQEQGLGMILIDYLQLIQGSGRSGENRQQEVSEISRTLKALARELEVPVIALSQLSRGVESRQDKRPMMSDIRESGS 385 (453)
T ss_pred HHHHHHCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCC
T ss_conf 99998669988999507733778988878999999999999999999699799964478431237999977101026552
Q ss_pred HHHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCC
Q ss_conf 23313878897255661644233332221110000001123388389999740899725999997468540200774466
Q gi|254780332|r 416 IEQDADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSSY 495 (504)
Q Consensus 416 IEqdAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~~ 495 (504)
T Consensus 386 IEqdAD~v~~l~R~~~y~~~~~-------------------~~~~~e~ivaK~RnG~~g~v~l~f~~~~~rf~~l~~~~~ 446 (453)
T PRK08082 386 IEQDADIVAFLYRDDYYDRETE-------------------NKNIIEIIIAKQRNGPVGTVELAFVKEYNKFVNLERRFD 446 (453)
T ss_pred HHHHCCEEEEECCHHHCCCCCC-------------------CCCEEEEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCC
T ss_conf 0533668989655654388888-------------------788069999736899861599998568674307110237
Q ss_pred CC
Q ss_conf 77
Q gi|254780332|r 496 QT 497 (504)
Q Consensus 496 ~~ 497 (504)
T Consensus 447 ~~ 448 (453)
T PRK08082 447 DA 448 (453)
T ss_pred CC
T ss_conf 67