HHsearch alignment for GI: 254780332 and conserved domain: PRK08084

Probab=94.48  E-value=0.32  Score=28.76  Aligned_cols=101  Identities=20%  Similarity=0.289  Sum_probs=49.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf             7267762131002769999999999851011123333321247975899958521799987899998741011000121-
Q gi|254780332|r  219 SDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGE-  297 (504)
Q Consensus       219 G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~-  297 (504)
T Consensus        45 ~~~l~l~G~~G~GKTHLLqA~~~~~~---------------~~~~~~~yl~~~~~~~-~~~~~l~~l~~~dll~iDDi~~  108 (235)
T PRK08084         45 SGYIYLWGREGAGRSHLLHAACAELS---------------QRGDAVGYVPLDKRAW-FVPEVLEGMEQLSLVCIDNIEC  108 (235)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHH---------------CCCCCEEEEEHHHHHH-HHHHHHHHHHHCCEEEEECHHH
T ss_conf             87699989999888999999999997---------------0798579987798665-1799998764189899827455


Q ss_pred             -CCHHHHHH-HHHHHHHHHH---CCEEEE-CCC--CC--CHHHHHHHH
Q ss_conf             -37688998-9999999862---780782-589--98--899999988
Q gi|254780332|r  298 -LTRPDYEK-IVACSQVMQK---LPLYID-QTG--GI--SMSQLATRA  335 (504)
Q Consensus       298 -l~~~e~~~-i~~a~~~l~~---~~l~I~-d~~--~~--ti~~I~~~~  335 (504)
T Consensus       109 i~g~~~~ee~lF~l~N~~~~~g~~~ll~ts~~~P~~l~~~l~DL~SRl  156 (235)
T PRK08084        109 IAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRL  156 (235)
T ss_pred             HCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCHHHHHHH
T ss_conf             469978999999999999984896699967988243023128899999