HHsearch alignment for GI: 254780332 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=94.86 E-value=0.1 Score=32.50 Aligned_cols=134 Identities=14% Similarity=0.152 Sum_probs=59.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCC-C-EEEEEECCC-----------CHHHHHHHHHHH
Q ss_conf 726776213100276999999999985101112333-33212479-7-589995852-----------179998789999
Q gi|254780332|r 219 SDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTD-GSYKTING-G-IVGFYSLEM-----------SSEQLATRIISE 284 (504)
Q Consensus 219 G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~-~~~~~~~g-~-~Vl~fSlEM-----------s~~el~~R~is~ 284 (504)
T Consensus 26 ~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~~i~~g~HPD~~~i~~~~~~~~~k~k~~I~Idqi-R~l~~~ 104 (319)
T PRK08769 26 GHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQLIAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQV-REISQK 104 (319)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH-HHHHHH
T ss_conf 2068758999878999999999998379979765433889996689989687753444454311234869999-999999
Q ss_pred HHHHCC---CCC---CCC-CCCHHHHHHHHHHHHHHHHCCEE--EECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHH
Q ss_conf 874101---100---012-13768899899999998627807--8258998899999988640224447467767135
Q gi|254780332|r 285 QTEVPS---SKI---RRG-ELTRPDYEKIVACSQVMQKLPLY--IDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQ 353 (504)
Q Consensus 285 ~s~I~~---~~i---~~g-~l~~~e~~~i~~a~~~l~~~~l~--I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLq 353 (504)
T Consensus 105 ~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEPp~~~~~iL~~~~~~~ll~TI~SRCq~~~~~~p~~~~~~~~L~ 182 (319)
T PRK08769 105 LALTPQYGIAQVVIVDPADAINRSACNALLKTLEEPSPGRYLWLISAQPARLPATIRSRCQRLEFKLPPAHEALAWLL 182 (319)
T ss_pred HHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf 613720279569998066752899999999982279988489998699365824776485011189969999999999