HHsearch alignment for GI: 254780332 and conserved domain: PRK09165
>PRK09165 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=992.43 Aligned_cols=480 Identities=65% Similarity=1.018 Sum_probs=450.3
Q ss_pred CHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHC
Q ss_conf 01026789978999999999832978999999442966637988899999999999839986864388897317983235
Q gi|254780332|r 17 SSQYRESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGEL 96 (504)
Q Consensus 17 ~~~~~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~i 96 (504)
T Consensus 3 ~~~~r~~P~~~eAE~aVLGalL~~~~~~~~v~~~L~~edFy~~~H~~If~ai~~L~~~g~~iD~itv~~~L~~~~~l~~v 82 (484)
T PRK09165 3 EPLYREAPHNIEAEQALLGAILINNRALYRVSDFLKPEHFFEPLHQRIYEAIAKIIRKGKLATPVTLKTFLENDEALGEL 82 (484)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC
T ss_conf 87668999988999999999984910799998527987779899999999999999769998798999998645872322
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 94899999996221122236778787899999999987655677512344453156668765544443201134466543
Q gi|254780332|r 97 TVPQYLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFH 176 (504)
Q Consensus 97 gg~~yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~ 176 (504)
T Consensus 83 GG~~yL~~L~~~~~s~an~~~Ya~iV~e~a~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~ae~~l~~l~~~~~~~~~~~ 162 (484)
T PRK09165 83 GGVQYLAKLATEAVTIINARDYGRIIYDLALRRELIGIGEDIVNNAYDAPVDVAPKEQIEDAEQKLYELAETGRYEGGFQ 162 (484)
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 77999999997088777899999999888899999999999999973577676789999999999999985476788841
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 01343367789999987411236644321013776556416772677621310027699999999998510111233333
Q gi|254780332|r 177 TFSDAMTVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGS 256 (504)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~ 256 (504)
T Consensus 163 ~~~~~~~~~~~~i~~~~~~~~~~~Gi~TGf~~LD~~t~G~~~GdLiIIAARPsmGKTafaLniA~n~A~~~~~~~~~~~~ 242 (484)
T PRK09165 163 SFGTAITEAVDMANAAFKRDGHLSGISTGLRDLDSKLGGLHPSDLIILAGRPSMGKTALATNIAFNAAKAYLREAQPDGS 242 (484)
T ss_pred EHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 59999999999999998379997733158445998715888773799960799977899999999999874102222332
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 21247975899958521799987899998741011000121376889989999999862780782589988999999886
Q gi|254780332|r 257 YKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRAR 336 (504)
Q Consensus 257 ~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r 336 (504)
T Consensus 243 ~~~~~g~~V~~FSLEMs~~ql~~Rlls~~s~V~~~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~~ti~~Ira~~R 322 (484)
T PRK09165 243 KKAVNGGVVGFFSLEMSAEQLATRILSEQSEISSSKIRRGKISEEDFEKLVDASQELQKLPLYIDDTPALSISALRARAR 322 (484)
T ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
T ss_conf 11368984899947799999999999997268613554489999999999999999971984897799987999999999
Q ss_pred HHCCCCCCCEEEECCHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 402244474677671353256644-3211378899999999999988279199977138220168999984010143242
Q gi|254780332|r 337 RLKRQRGLDLLIVDYIQLMTTSKK-IEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGS 415 (504)
Q Consensus 337 ~~~~~~gi~~vvIDYLqli~~~~~-~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~ 415 (504)
T Consensus 323 r~k~~~gl~livIDYLqLi~~~~~~~~~~R~~ev~~Isr~LK~lAkel~ipVi~LsQLnR~~E~R~dkrP~lsDLReSGs 402 (484)
T PRK09165 323 RLKRQHGLDLLVIDYLQLIRGSSKRSQDNRVQEISEITQGLKALAKELNIPVIALSQLSRQVEQRDDKRPQLSDLRESGS 402 (484)
T ss_pred HHHHHHCCCEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99986099889995176357888886121999999999999999999699699974578442347999976001035552
Q ss_pred HHHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCC
Q ss_conf 23313878897255661644233332221110000001123388389999740899725999997468540200774466
Q gi|254780332|r 416 IEQDADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSSY 495 (504)
Q Consensus 416 IEqdAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~~ 495 (504)
T Consensus 403 IEQDADvV~flyR~~yY~~~~~~~~~~--~~~~~~~~~~~~~~~~~elivaKnRnG~~G~v~l~f~~~~~rF~dla~~~~ 480 (484)
T PRK09165 403 IEQDADVVMFVYREEYYLKRKEPREGT--PKHEEWQEKMEKVHNKAEVIIAKQRHGPTGTVKLHFESEFTRFGDLADDSY 480 (484)
T ss_pred HHHCCCEEEEECCHHHHCCCCCCCCCC--CCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 022077899964476613445877675--201223210124588079999637889860699998778776227888668
Q ss_pred CCC
Q ss_conf 777
Q gi|254780332|r 496 QTG 498 (504)
Q Consensus 496 ~~~ 498 (504)
T Consensus 481 ~~~ 483 (484)
T PRK09165 481 LPE 483 (484)
T ss_pred CCC
T ss_conf 999