HHsearch alignment for GI: 254780332 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=96.88  E-value=0.0015  Score=46.44  Aligned_cols=40  Identities=33%  Similarity=0.582  Sum_probs=34.3

Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             1677267762131002769999999999851011123333321247975899958
Q gi|254780332|r  216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL  270 (504)
Q Consensus       216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl  270 (504)
T Consensus        98 i~~~~Nvil~G~~GtGKThLA~Alg~~A~~---------------~G~~v~f~~~  137 (258)
T PRK09183         98 IERNENIVLLGPSGVGKTHLAIALGYEAVR---------------AGIKVRFTTA  137 (258)
T ss_pred             HHCCCCEEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEEEH
T ss_conf             655886799899998689999999999998---------------7993999789