HHsearch alignment for GI: 254780332 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=97.49 E-value=0.0026 Score=44.64 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=63.3
Q ss_pred HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EEEECCCCHHHHHHHHHHHH--HHHCCCC
Q ss_conf 16772677621310027699999999998510111233333212479758-99958521799987899998--7410110
Q gi|254780332|r 216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIV-GFYSLEMSSEQLATRIISEQ--TEVPSSK 292 (504)
Q Consensus 216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~V-l~fSlEMs~~el~~R~is~~--s~I~~~~ 292 (504)
T Consensus 90 ~~~g~SFaiiAPTG~GKTtfgl~~sly~a~k---------------gkks~~i~PT~~Lv~Q~~~kl~~~~~~~~~~~~~ 154 (1176)
T PRK09401 90 LLLGESFAIIAPTGVGKTTFGLVMALYLAKK---------------GKKSYIIFPTRLLVEQVVEKLRKLAEKVGVKVRL 154 (1176)
T ss_pred HHCCCCEEEECCCCCCHHHHHHHHHHHHHHC---------------CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 8668974898889988889999999999865---------------9839999688899999999999999970998408
Q ss_pred C-CCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHH
Q ss_conf 0-012137688998999999986278078258998899999988640224447467767135
Q gi|254780332|r 293 I-RRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQ 353 (504)
Q Consensus 293 i-~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLq 353 (504)
T Consensus 155 ~~y~~~~~~~~kee~~~~~~~-gdfdIlit-----T~~fl-~kn~~~l~~~~f~fifvDDVD 209 (1176)
T PRK09401 155 LYYHSSLKKKEKEEFLERLEE-GDFDILVT-----TSQFL-SKNFDELPKDRFDFVFVDDVD 209 (1176)
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCCCEEEE-----EHHHH-HHHHHHCCCCCCCEEEEECHH
T ss_conf 998567766678999988655-99868998-----56767-654876035688889993418