HHsearch alignment for GI: 254780332 and conserved domain: PRK09401

>PRK09401 reverse gyrase; Reviewed.
Probab=97.49  E-value=0.0026  Score=44.64  Aligned_cols=116  Identities=16%  Similarity=0.230  Sum_probs=63.3

Q ss_pred             HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE-EEEECCCCHHHHHHHHHHHH--HHHCCCC
Q ss_conf             16772677621310027699999999998510111233333212479758-99958521799987899998--7410110
Q gi|254780332|r  216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIV-GFYSLEMSSEQLATRIISEQ--TEVPSSK  292 (504)
Q Consensus       216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~V-l~fSlEMs~~el~~R~is~~--s~I~~~~  292 (504)
T Consensus        90 ~~~g~SFaiiAPTG~GKTtfgl~~sly~a~k---------------gkks~~i~PT~~Lv~Q~~~kl~~~~~~~~~~~~~  154 (1176)
T PRK09401         90 LLLGESFAIIAPTGVGKTTFGLVMALYLAKK---------------GKKSYIIFPTRLLVEQVVEKLRKLAEKVGVKVRL  154 (1176)
T ss_pred             HHCCCCEEEECCCCCCHHHHHHHHHHHHHHC---------------CCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             8668974898889988889999999999865---------------9839999688899999999999999970998408


Q ss_pred             C-CCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHH
Q ss_conf             0-012137688998999999986278078258998899999988640224447467767135
Q gi|254780332|r  293 I-RRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQ  353 (504)
Q Consensus       293 i-~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLq  353 (504)
T Consensus       155 ~~y~~~~~~~~kee~~~~~~~-gdfdIlit-----T~~fl-~kn~~~l~~~~f~fifvDDVD  209 (1176)
T PRK09401        155 LYYHSSLKKKEKEEFLERLEE-GDFDILVT-----TSQFL-SKNFDELPKDRFDFVFVDDVD  209 (1176)
T ss_pred             EEEECCCCHHHHHHHHHHHHC-CCCCEEEE-----EHHHH-HHHHHHCCCCCCCEEEEECHH
T ss_conf             998567766678999988655-99868998-----56767-654876035688889993418