HHsearch alignment for GI: 254780332 and conserved domain: PRK10247
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional.
Probab=96.47 E-value=0.008 Score=40.94 Aligned_cols=172 Identities=17% Similarity=0.235 Sum_probs=84.9
Q ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC---CCCHHHHHHHHHHHH
Q ss_conf 77655641677267762131002769999999999851011123333321247975899958---521799987899998
Q gi|254780332|r 209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL---EMSSEQLATRIISEQ 285 (504)
Q Consensus 209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl---EMs~~el~~R~is~~ 285 (504)
T Consensus 23 L~~is~~i~~Ge~~~i~G~sGsGKSTLlk~i~g-l~~p--------------~~G~I~~~g~~i~~~~~~~~r-~~i~~v 86 (225)
T PRK10247 23 LNNINFSLRAGEFKLITGPSGCGKSTLLKIVAS-LISP--------------TSGTLLFEGEDISTLKPEIYR-QQVSYC 86 (225)
T ss_pred EECEEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCCC--------------CCCEEEECCEECCCCCHHHHH-HHCCEE
T ss_conf 945179985996999999999999999999964-6688--------------876599999997749999998-527457
Q ss_pred HHHCC-------CCCCCC---CCCHHHHHHHHHHHHHHHHCCEEEECC-CCCCHHHH--HHHHHHHCCCCCCCEEEECCH
Q ss_conf 74101-------100012---137688998999999986278078258-99889999--998864022444746776713
Q gi|254780332|r 286 TEVPS-------SKIRRG---ELTRPDYEKIVACSQVMQKLPLYIDQT-GGISMSQL--ATRARRLKRQRGLDLLIVDYI 352 (504)
Q Consensus 286 s~I~~-------~~i~~g---~l~~~e~~~i~~a~~~l~~~~l~I~d~-~~~ti~~I--~~~~r~~~~~~gi~~vvIDYL 352 (504)
T Consensus 87 ~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSGGqkQRv~iARaL~--~~p~iLllD-- 162 (225)
T PRK10247 87 AQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQ--FMPKVLLLD-- 162 (225)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH--CCCCEEEEE--
T ss_conf 0455434153999998578766766789999999987599566761881118999999999999986--099999995--
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
Q ss_conf 53256644321137889999999999998827919997713822016899998401014324223313878897
Q gi|254780332|r 353 QLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFV 426 (504)
Q Consensus 353 qli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l 426 (504)
T Consensus 163 ---EPts~-LD~--~~~~~i~~~i~~l~~~~~~tvi~vtH----------------d~~---~~~-~aDrIivL 210 (225)
T PRK10247 163 ---EITSA-LDE--SNKHNVNEIIHRYVREQNIAVLWVTH----------------DKD---EIN-HADKVITL 210 (225)
T ss_pred ---CCCCC-CCH--HHHHHHHHHHHHHHHHCCCEEEEEEC----------------CHH---HHH-CCCEEEEE
T ss_conf ---97666-899--99999999999999838989999903----------------999---997-09989999