HHsearch alignment for GI: 254780332 and conserved domain: PRK10418
>PRK10418 nikD nickel transporter ATP-binding protein; Provisional.
Probab=96.17 E-value=0.071 Score=33.71 Aligned_cols=187 Identities=14% Similarity=0.148 Sum_probs=87.2
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH---HCCCCCCCCCCC---CCCCCCEEEEEECCCCHHHHHH-H
Q ss_conf 37765564167726776213100276999999999985---101112333332---1247975899958521799987-8
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVAD---AYKAELQTDGSY---KTINGGIVGFYSLEMSSEQLAT-R 280 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~---~~~~~~~~~~~~---~~~~g~~Vl~fSlEMs~~el~~-R 280 (504)
T Consensus 18 vL~~Isl~v~~Ge~~aiiG~SGsGKStl~k~llgll~~~~~~~~G~i~~dg~~~~~~~~r~r~i~~v~Q~-p~~~~~p~~ 96 (254)
T PRK10418 18 LVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLADGKPVAPCALRGRKIATIMQN-PRSAFNPLH 96 (254)
T ss_pred EEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCEEEECCEECCHHHHCCCCEEEEEEC-CHHHCCHHH
T ss_conf 8866072898999999999998789999999957998898415789999999996034305508999837-522137688
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC--EEEECCC-CCCHH--HHHHHHHHHCCCCCCCEEEECCHHHC
Q ss_conf 9999874101100012137688998999999986278--0782589-98899--99998864022444746776713532
Q gi|254780332|r 281 IISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLP--LYIDQTG-GISMS--QLATRARRLKRQRGLDLLIVDYIQLM 355 (504)
Q Consensus 281 ~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~--l~I~d~~-~~ti~--~I~~~~r~~~~~~gi~~vvIDYLqli 355 (504)
T Consensus 97 ~v~~--~~~~~~~~~~~--~~~~~~~~~~l~~vgL~~~~~~l~~~P~qLSGGq~QRvaiArAL~--~~P~lLilD----- 165 (254)
T PRK10418 97 TMHT--HARETCLALGK--PADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIALALL--CEAPFIIAD----- 165 (254)
T ss_pred HHHH--HHHHHHHHCCC--CHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCHHHHHHHHHHHHHH--CCCCEEEEC-----
T ss_conf 9999--99999986582--059999999999839998688764192634879999999999985--499989855-----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 5664432113788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r 356 TTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 356 ~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 166 EPTs~-LD~~--~~~~il~ll~~l~~~~g~tii~vTH----------------Dl---~~a~~~aDri~Vm~~ 216 (254)
T PRK10418 166 EPTTD-LDVV--AQARILDLLESIVQKRALGMLLVTH----------------DM---GVVARLADDVAVMSH 216 (254)
T ss_pred CCCCC-CCHH--HHHHHHHHHHHHHHHHCCEEEEEEC----------------CH---HHHHHHCCEEEEEEC
T ss_conf 87543-7999--9999999999999970997999969----------------99---999996899999989