HHsearch alignment for GI: 254780332 and conserved domain: PRK10771
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional.
Probab=96.75 E-value=0.017 Score=38.48 Aligned_cols=172 Identities=17% Similarity=0.174 Sum_probs=86.4
Q ss_pred HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---CCCCCCEEEEEEC------CCCHHHHHHHHHHHHH
Q ss_conf 167726776213100276999999999985101112333332---1247975899958------5217999878999987
Q gi|254780332|r 216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSY---KTINGGIVGFYSL------EMSSEQLATRIISEQT 286 (504)
Q Consensus 216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~---~~~~g~~Vl~fSl------EMs~~el~~R~is~~s 286 (504)
T Consensus 22 i~~GE~v~iiG~nGaGKSTLl~~i~-Gll~p~sG~I~i~G~~~~~~~~~~r~i~~v~Q~~~l~~~ltv~eni~------- 93 (233)
T PRK10771 22 VERGEQVAILGPSGAGKSTLLNLIA-GFLTPASGSLLINGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG------- 93 (233)
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCCHHHHHH-------
T ss_conf 8899899999999981999999996-59999855999999998879988888799905776688990999998-------
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC-CCCHHH--HHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCC
Q ss_conf 41011000121376889989999999862780782589-988999--999886402244474677671353256644321
Q gi|254780332|r 287 EVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTG-GISMSQ--LATRARRLKRQRGLDLLIVDYIQLMTTSKKIEE 363 (504)
Q Consensus 287 ~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~-~~ti~~--I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~ 363 (504)
T Consensus 94 ---~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~LSGGq~QRv~iAraL~--~~P~vLllD-----EPts~-LD 161 (233)
T PRK10771 94 ---LGLNPGLKLNAAQREKLHAIARQMG-IENLLARLPGELSGGQRQRVALARCLV--REQPILLLD-----EPFSA-LD 161 (233)
T ss_pred ---HHHHCCCCCCHHHHHHHHHHHHHCC-CHHHHCCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----CCCCC-CC
T ss_conf ---7862267876889999999998779-966860894559999999999999985--599999992-----87755-79
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 13788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r 364 NRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 364 ~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 162 ~--~~~~~i~~ll~~l~~~~~~til~vtH----------------dl---~~~~~~adri~vl~~ 205 (233)
T PRK10771 162 P--ALRQEMLTLVSQVCQQRQLTLLMVSH----------------SV---EDAARIAPRSLVVAD 205 (233)
T ss_pred H--HHHHHHHHHHHHHHHHCCCEEEEEEC----------------CH---HHHHHHCCEEEEEEC
T ss_conf 9--99999999999999836989999924----------------89---999996999999989