HHsearch alignment for GI: 254780332 and conserved domain: PRK11022
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional.
Probab=96.60 E-value=0.023 Score=37.51 Aligned_cols=179 Identities=15% Similarity=0.213 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE---CCCCHHHHHHHHH
Q ss_conf 0137765564167726776213100276999999999985101112333332124797589995---8521799987899
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYS---LEMSSEQLATRII 282 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fS---lEMs~~el~~R~i 282 (504)
T Consensus 20 v~Av~~Vsf~i~~GEilgivGeSGsGKSTl~~~ilgll~~~~-----------~~~~g~i~~~g~dl~~~~~~~~~-~~~ 87 (327)
T PRK11022 20 FKAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPG-----------RVMAEKLEFNGQDLQRISEKERR-NLV 87 (327)
T ss_pred EEEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC-----------CEEEEEEEECCEECCCCCHHHHH-HHH
T ss_conf 999844187988999999999998789999999974889899-----------76542799999997749999999-863
Q ss_pred ----HHHHHHCCC----------------CCCCCCCCHHHHHHHHHHHHHHHHCCE-----EEECCC-CCCHHHH--HHH
Q ss_conf ----998741011----------------000121376889989999999862780-----782589-9889999--998
Q gi|254780332|r 283 ----SEQTEVPSS----------------KIRRGELTRPDYEKIVACSQVMQKLPL-----YIDQTG-GISMSQL--ATR 334 (504)
Q Consensus 283 ----s~~s~I~~~----------------~i~~g~l~~~e~~~i~~a~~~l~~~~l-----~I~d~~-~~ti~~I--~~~ 334 (504)
T Consensus 88 g~~i~~vfQdp~~sLnP~~tv~~~i~e~l~~~~~-~~~~--~~~~r~~elL~~vgl~~~~~~l~~yP~eLSGGq~QRV~I 164 (327)
T PRK11022 88 GAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQG-GNKK--TRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMI 164 (327)
T ss_pred CCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHCC-CCHH--HHHHHHHHHHHHHCCCCHHHHHHCCHHHCCHHHHHHHHH
T ss_conf 7766999608513207455555767778887527-8889--999999999987158568889742855469999999999
Q ss_pred HHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86402244474677671353256644321137889999999999998827919997713822016899998401014324
Q gi|254780332|r 335 ARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESG 414 (504)
Q Consensus 335 ~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg 414 (504)
T Consensus 165 ArAL~--~~P~lLIaD-----EPTsa-LD~~--~q~~Il~ll~~l~~~~g~til~ITH----------------Dl---~ 215 (327)
T PRK11022 165 AMAIA--CRPKLLIAD-----EPTTA-LDVT--IQAQIIELLLELQQKENMALVLITH----------------DL---A 215 (327)
T ss_pred HHHHH--HCCCEEEEC-----CCCCC-CCHH--HHHHHHHHHHHHHHHHCCCEEEEEC----------------CH---H
T ss_conf 99997--099999983-----88765-7999--9999999999999971994899928----------------89---9
Q ss_pred HHHHHCCEEEEEEC
Q ss_conf 22331387889725
Q gi|254780332|r 415 SIEQDADVVLFVIR 428 (504)
Q Consensus 415 ~IEqdAD~v~~l~R 428 (504)
T Consensus 216 ~v~~~aDri~VMy~ 229 (327)
T PRK11022 216 LVAEAAHKIIVMYA 229 (327)
T ss_pred HHHHHCCEEEEEEC
T ss_conf 99986998999989