HHsearch alignment for GI: 254780332 and conserved domain: PRK11607
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional.
Probab=97.04 E-value=0.006 Score=41.92 Aligned_cols=147 Identities=12% Similarity=0.186 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-----CCCCCCEEE--------------
Q ss_conf 0137765564167726776213100276999999999985101112333332-----124797589--------------
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSY-----KTINGGIVG-------------- 266 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~-----~~~~g~~Vl-------------- 266 (504)
T Consensus 32 ~~al~~vsl~I~~GE~~~llGpsGsGKSTllr~i~-Gl~~p~~G~I~i~G~di~~~~~~~r~ig~vfQ~~~L~p~ltV~e 110 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLA-GFEQPSAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQ 110 (377)
T ss_pred EEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCCHHH
T ss_conf 99990518799999899999999848999999997-69999865999999998879866665046701265587757545
Q ss_pred --EEEC---CCCHHHHHHHHHHHHHHHCCCCCCC---CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHH-----HHHH
Q ss_conf --9958---5217999878999987410110001---2137688998999999986278078258998899-----9999
Q gi|254780332|r 267 --FYSL---EMSSEQLATRIISEQTEVPSSKIRR---GELTRPDYEKIVACSQVMQKLPLYIDQTGGISMS-----QLAT 333 (504)
Q Consensus 267 --~fSl---EMs~~el~~R~is~~s~I~~~~i~~---g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~-----~I~~ 333 (504)
T Consensus 111 Ni~~~l~~~~~~~~e~~~rv~e~l~~v~L~~~~~~~p~~LSGGqrQRVaiArAL~~~P~lLllDEPts~LD~~~r~~l~~ 190 (377)
T PRK11607 111 NIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQL 190 (377)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf 24547866599989999999999854462766658965789868789999998744997899648754479999999999
Q ss_pred HHHHHCCCCCCCEEEECCHH
Q ss_conf 88640224447467767135
Q gi|254780332|r 334 RARRLKRQRGLDLLIVDYIQ 353 (504)
Q Consensus 334 ~~r~~~~~~gi~~vvIDYLq 353 (504)
T Consensus 191 ~l~~l~~~~g~Tii~VTHD~ 210 (377)
T PRK11607 191 EVVDILERVGVTCVMVTHDQ 210 (377)
T ss_pred HHHHHHHHHCCEEEEECCCH
T ss_conf 99999997399999999899